ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf88c12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os02g0279600:Os02g0279600 87 7e-18
2AK110809:Os08g0166400 30 1.7

>Os02g0279600:Os02g0279600 |
          Length = 121
 Score = 87.4 bits (215), Expect = 7e-18
 Identities = 53/99 (53%), Positives = 64/99 (64%), Gaps = 6/99 (6%)
 Frame = +2

Query: 80  VAEQIGQAVQSTSNLLQLMEQSSPAQIHXXXXXXXXXXXXXXTKNTEQVLQQLPNVISSL 259
           VAEQI QAVQSTSNLLQLME+SSPAQ H               KNT QVL QLP+VISSL
Sbjct: 18  VAEQIAQAVQSTSNLLQLMEESSPAQAHLAKLPKKLLAKASLAKNTGQVLHQLPSVISSL 77

Query: 260 DAFMDSSLQ-----RKIKRILS-LENSGLTDVFTAKSRS 358
           DA+MD+SLQ     + + ++LS +EN+ L  +  A   S
Sbjct: 78  DAYMDASLQSASQIKTVTQLLSNMENNQLRSILPASRYS 116



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>AK110809:Os08g0166400 |
          Length = 454

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -3

Query: 484 TRTLFCTFQRHLPPESCQLYNSSVTTLFSSRSQL 383
           TR +FC   R+L P+SCQ   + +   FSS++QL
Sbjct: 170 TRKVFCA--RNLLPQSCQNLENVIEKHFSSKTQL 201


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 15,221,354
Number of extensions: 307042
Number of successful extensions: 830
Number of sequences better than 10.0: 2
Number of HSP's gapped: 830
Number of HSP's successfully gapped: 2
Length of query: 210
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 114
Effective length of database: 11,555,919
Effective search space: 1317374766
Effective search space used: 1317374766
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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