>LOC_Os02g17850:12002.t01579:unspliced-genomic TOM2B, putative, expressed|
Length = 3110
Score = 55.6 bits (115), Expect(4) = 4e-22
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +2 / +1
Query: 80 VAEQIGQAVQSTSNLLQLMEQSSPAQI 160
VAEQI QAVQSTSNLLQLME+SSPAQ+
Sbjct: 64 VAEQIAQAVQSTSNLLQLMEESSPAQV 144
Score = 43.2 bits (88), Expect(4) = 4e-22
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +2 / +3
Query: 224 VLQQLPNVISSLDAFMDSSLQR 289
VL QLP+VISSLDA+MD+SLQR
Sbjct: 1488 VLHQLPSVISSLDAYMDASLQR 1553
Score = 39.6 bits (80), Expect(4) = 4e-22
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 162 TWLNSLRISWQKHLLQRTQSK 224
TW N R SWQKHLLQRTQ +
Sbjct: 1363 TWQNFPRNSWQKHLLQRTQGR 1425
Score = 29.5 bits (58), Expect(4) = 4e-22
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 287 RKIKRILSLENSGLTDVFT 343
RK +R L LENSGL D FT
Sbjct: 1810 RKHRRKLRLENSGLNDKFT 1866
Score = 57.9 bits (120), Expect(3) = 3e-17
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / -1
Query: 156 WAGEDCSMSWRRLEVDCTACPIC 88
WAGED SMSWRRL+VDCTAC IC
Sbjct: 140 WAGEDSSMSWRRLDVDCTACAIC 72
Score = 41.4 bits (84), Expect(3) = 3e-17
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1 / -2
Query: 225 TCSVFFVRDAFAKRFLGSLAK 163
TC VFF RDAFAK FLGS A+
Sbjct: 1426 TCPVFFARDAFAKSFLGSFAR 1364
Score = 32.7 bits (65), Expect(3) = 3e-17
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / -1
Query: 286 LQTTVHKSIQGRNYIR 239
LQT+VH SIQGRNY R
Sbjct: 1550 LQTSVHISIQGRNYTR 1503
Score = 43.2 bits (88), Expect(3) = 3e-10
Identities = 14/18 (77%), Positives = 18/18 (100%)
Frame = +3 / +1
Query: 234 SYLM*FLPWMLLWTVVCK 287
+YL+*FLPWML+WT+VCK
Sbjct: 1498 NYLV*FLPWMLIWTLVCK 1551
Score = 34.1 bits (68), Expect(3) = 3e-10
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 109 VHLQPSPAHGAVLPCP 156
VH+QP PAHG VLP P
Sbjct: 93 VHVQPPPAHGGVLPGP 140
Score = 30.4 bits (60), Expect(3) = 3e-10
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1 / +2
Query: 166 G*TP*ESLGKSISYKEHRA 222
G T E+LGKSIS KEHRA
Sbjct: 1367 GKTSQETLGKSISCKEHRA 1423
Score = 35.9 bits (72), Expect(4) = 4e-08
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -3 / -3
Query: 157 LGRGGLLHELEKVGGG 110
LGRGGLLHELE+VG G
Sbjct: 141 LGRGGLLHELEEVGRG 94
Score = 32.7 bits (65), Expect(4) = 4e-08
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / -1
Query: 205 KRCFCQEILREFSQVDL 155
KRCFCQE L +F QV L
Sbjct: 1406 KRCFCQEFLGKFCQVSL 1356
Score = 28.1 bits (55), Expect(4) = 4e-08
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 264 ASKEEITLGSCCST 223
ASKEEITLGS C T
Sbjct: 1528 ASKEEITLGS*CRT 1487
Score = 21.7 bits (41), Expect(4) = 4e-08
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2 / -3
Query: 284 ANYCP*KHPRKK 249
AN P KHPRKK
Sbjct: 1548 AN*RPYKHPRKK 1513
Score = 42.3 bits (86), Expect = 0.003
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +1 / +2
Query: 232 TAT*CNFFLGCFYGQ*FAKKDQKNTEP 312
+ T*CNFFLGC YG+*FAK N+ P
Sbjct: 1496 STT*CNFFLGCLYGR*FAKVIFSNSFP 1576
>LOC_Os07g42160:12007.t03871:unspliced-genomic GTP pyrophosphokinase, putative, expressed|
Length = 3519
Score = 29.0 bits (57), Expect(2) = 6.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / -1
Query: 154 GRGGLLHELEKVGGG 110
GRGG+LH L + GGG
Sbjct: 264 GRGGVLHHLHRHGGG 220
Score = 23.5 bits (45), Expect(2) = 6.2
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / -2
Query: 252 EITLGSCCSTCS 217
EITL SCC C+
Sbjct: 2000 EITLPSCCRYCT 1965
>LOC_Os03g20450:12003.t01803:unspliced-genomic ATP binding protein, putative, expressed|
Length = 5067
Score = 29.0 bits (57), Expect(2) = 8.6
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -1 / +1
Query: 156 WAGEDCSMSWRRLEVDCTACPIC 88
W GE +W + +DC C +C
Sbjct: 3178 WRGETRYETWNSVCIDCMCCSLC 3246
Score = 23.5 bits (45), Expect(2) = 8.6
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1 / +2
Query: 243 LGSCCSTCSVFFV 205
LG CCS CS+ V
Sbjct: 257 LGICCSHCSILGV 295
>LOC_Os05g12170:12005.t01047:unspliced-genomic plant-specific domain TIGR01589 family protein, expressed|
Length = 6811
Score = 30.9 bits (61), Expect = 8.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3 / -3
Query: 225 CYNSYLM*FLPWMLLWTVVCKERSKEY 305
C N +++*FL L+W V K++ ++Y
Sbjct: 5132 CINGFIL*FLSKHLIWRVSSKQQKRKY 5052
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 230,657,574
Number of extensions: 3512812
Number of successful extensions: 13211
Number of sequences better than 10.0: 11
Length of query: 210
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 162
Effective length of database: 52,912,542
Effective search space: 8571831804
Effective search space used: 8571831804
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)