ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf88c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT835461.1| Oryza sativa (indica cultivar-group) cDNA clone:... 182 1e-42
2ref|NM_001053086.1| Oryza sativa (japonica cultivar-group) Os02g... 182 1e-42
3gb|DQ244951.1| Zea mays clone 11878 mRNA sequence 159 1e-35
4gb|AY109200.1| Zea mays PCO117759 mRNA sequence 151 4e-33
5emb|CT835494.1| Oryza sativa (indica cultivar-group) cDNA clone:... 123 8e-25
6gb|BT016321.1| Zea mays clone Contig154 mRNA sequence 103 7e-19
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
8dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
9dbj|AP006105.1| Lotus japonicus genomic DNA, chromosome 3, clone... 50 0.010
10gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 gen... 44 0.59
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
12emb|BX927297.12| Zebrafish DNA sequence from clone DKEY-238M4 in... 44 0.59
13ref|NM_001060003.1| Oryza sativa (japonica cultivar-group) Os04g... 42 2.4
14gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s... 42 2.4
15gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
16gb|AC117472.3| Homo sapiens 3 BAC RP11-567P17 (Roswell Park Canc... 42 2.4
17gb|AC093500.2| Drosophila melanogaster 3L BAC RP98-29P5 (Roswell... 42 2.4
18gb|AC010716.4| Drosophila melanogaster 3L BAC RP98-11A21 (Roswel... 42 2.4
19tpg|BK000939.1| TPA_inf: Oryza sativa transposon Rim2-M339, comp... 42 2.4
20emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 2.4
21dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
22dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
24dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
25emb|AL354945.17| Human DNA sequence from clone RP11-59K17 on chr... 42 2.4
26dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
27dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
28dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
29dbj|AK119259.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
30ref|XM_307918.2| Anopheles gambiae str. PEST ENSANGP00000021868 ... 42 2.4
31gb|AY104494.1| Zea mays PCO133236 mRNA sequence 42 2.4
32gb|CP000479.1| Mycobacterium avium 104, complete genome 40 9.3
33emb|CT834240.1| Oryza sativa (indica cultivar-group) cDNA clone:... 40 9.3
34emb|CR855156.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 9.3
35emb|CR855151.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 9.3
36ref|NM_001073631.1| Oryza sativa (japonica cultivar-group) Os12g... 40 9.3
37ref|NM_001067981.1| Oryza sativa (japonica cultivar-group) Os08g... 40 9.3
38ref|NM_001063086.1| Oryza sativa (japonica cultivar-group) Os06g... 40 9.3
39ref|NM_001059629.1| Oryza sativa (japonica cultivar-group) Os04g... 40 9.3
40ref|NM_001051419.1| Oryza sativa (japonica cultivar-group) Os01g... 40 9.3
41ref|XM_395056.3| PREDICTED: Apis mellifera similar to CG3973-PA ... 40 9.3
42ref|XR_009388.1| PREDICTED: Rattus norvegicus similar to tubulin... 40 9.3
43ref|XR_006099.1| PREDICTED: Rattus norvegicus similar to tubulin... 40 9.3
44ref|XR_007674.1| PREDICTED: Rattus norvegicus similar to tubulin... 40 9.3
45ref|XR_006205.1| PREDICTED: Rattus norvegicus similar to tubulin... 40 9.3
46ref|XM_001102827.1| PREDICTED: Macaca mulatta similar to myosin ... 40 9.3
47emb|CT485999.14| Mouse DNA sequence from clone RP23-340F1 on chr... 40 9.3
48gb|AC185350.5| Nasonia vitripennis BAC NV_Bb-46A6 (Clemson Univ... 40 9.3
49gb|DQ310668.1| Caenestheriella setosa 16S ribosomal RNA gene, pa... 40 9.3
50ref|XM_631451.1| Dictyostelium discoideum AX4 hypothetical prote... 40 9.3
51gb|AC161494.3| Mus musculus chromosome 5, clone RP23-295B4, comp... 40 9.3
52gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
53ref|XM_595090.2| PREDICTED: Bos taurus similar to F28C1.3a (LOC5... 40 9.3
54gb|AC153600.8| Mus musculus 6 BAC RP23-380C10 (Roswell Park Canc... 40 9.3
55gb|AC153597.13| Mus musculus 6 BAC RP23-18K9 (Roswell Park Cance... 40 9.3
56gb|AC127246.3| Mus musculus BAC clone RP24-424L20 from chromosom... 40 9.3
57ref|XM_541588.2| PREDICTED: Canis familiaris similar to Multiple... 40 9.3
58gb|AC113596.8| Mus musculus chromosome 5, clone RP23-374B20, com... 40 9.3
59gb|AC163723.3| Mus musculus BAC clone RP23-450O11 from chromosom... 40 9.3
60dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 9.3
61ref|XM_387476.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 9.3
62gb|AC165292.2| Mus musculus BAC clone RP23-319D22 from chromosom... 40 9.3
63ref|NM_069916.2| Caenorhabditis elegans Proline HYdroxylase fami... 40 9.3
64emb|Z69637.1|CEF35G2 Caenorhabditis elegans Cosmid F35G2, comple... 40 9.3
65emb|CR847806.15| Zebrafish DNA sequence from clone CH211-267J10 ... 40 9.3
66gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 geno... 40 9.3
67ref|NM_172944.1| Mus musculus integrin, alpha E, epithelial-asso... 40 9.3
68gb|AC112184.2| Homo sapiens chromosome 5 clone RP11-168A11, comp... 40 9.3
69dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
70dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
71dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
72gb|AC092846.5| Homo sapiens BAC clone RP11-617A17 from 4, comple... 40 9.3
73emb|AL139342.7| Human DNA sequence from clone RP5-1016N21 on chr... 40 9.3
74emb|AL117376.28|HSDJ971B4 Human DNA sequence from clone RP5-971B... 40 9.3
75emb|AL133456.1| Human DNA sequence from clone RP1-231P7P on chro... 40 9.3
76gb|AC124908.3| Equus caballus clone CH241-67M21, complete sequence 40 9.3
77gb|AC158979.2| Mus musculus BAC clone RP23-218C24 from chromosom... 40 9.3
78gb|DQ088967.1| Homo sapiens calcium-sensing receptor (hypocalciu... 40 9.3
79emb|AL670399.4| Mouse DNA sequence from clone RP23-263M10 on chr... 40 9.3
80emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4,... 40 9.3
81gb|AF332861.1|AF332860S2 Mus musculus diadenosine triphosphate h... 40 9.3
82dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
83gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 fro... 40 9.3
84gb|AF289866.1|AF289866 Mus musculus integrin alpha-E (Itgae) gen... 40 9.3
85gb|AC144800.3| Mus musculus BAC clone RP24-257N2 from chromosome... 40 9.3
86dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
87dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
88dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
89dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
90dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
91gb|AC068754.16| Homo sapiens 3 BAC RP11-79M2 (Roswell Park Cance... 40 9.3
92dbj|AK108344.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
93dbj|AK106088.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
94dbj|AK103829.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
95dbj|AK100935.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
96dbj|AK069006.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
97dbj|AK060638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
98dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
99dbj|AP004243.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.3
100emb|CT025577.11| Mouse DNA sequence from clone RP24-172I18 on ch... 40 9.3
101emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb... 40 9.3
102emb|AL096757.1|HSJ231P7P Human DNA sequence from clone 231P7p on... 40 9.3
103emb|AL607108.17| Mouse DNA sequence from clone RP23-42F6 on chro... 40 9.3
104dbj|AB036930.1| Mus musculus genes for integrin aM290, haspin, p... 40 9.3 
>emb|CT835461.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN018N20, full
           insert sequence
          Length = 820
 Score =  182 bits (92), Expect = 1e-42
 Identities = 161/184 (87%)
 Strand = Plus / Plus

                                                                       
Query: 105 tgcagtccacctccaaccttctccagctcatggagcagtcctcccctgcccagatccact 164
           |||||||||| |||||||| ||||||||||||||| |||||||||| ||||||   ||| 
Sbjct: 103 tgcagtccacgtccaacctcctccagctcatggaggagtcctccccggcccaggctcacc 162

                                                                       
Query: 165 tggctaaactccctaagaatctcttggcaaaagcatctcttacaaagaacacagagcaag 224
           |||| ||||| || ||||| ||||||||||||||||||||| |||||||||||| ||| |
Sbjct: 163 tggcaaaacttcccaagaaactcttggcaaaagcatctcttgcaaagaacacagggcagg 222

                                                                       
Query: 225 tgctacaacagctacctaatgtaatttcttccttggatgcttttatggacagtagtttgc 284
           | || || || ||||||| ||||||||||||||||||||||| |||||||  ||||||||
Sbjct: 223 tcctgcatcaactacctagtgtaatttcttccttggatgcttatatggacgctagtttgc 282

               
Query: 285 aaag 288
           ||||
Sbjct: 283 aaag 286



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 298 aagaatactgagcctggagaactcagggttgactgat 334
           ||||| |||||| |||||||||||||| |||| ||||
Sbjct: 384 aagaaaactgagactggagaactcaggattgaatgat 420
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>ref|NM_001053086.1| Oryza sativa (japonica cultivar-group) Os02g0279600 (Os02g0279600)
           mRNA, complete cds
          Length = 366

 Score =  182 bits (92), Expect = 1e-42
 Identities = 161/184 (87%)
 Strand = Plus / Plus

                                                                       
Query: 105 tgcagtccacctccaaccttctccagctcatggagcagtcctcccctgcccagatccact 164
           |||||||||| |||||||| ||||||||||||||| |||||||||| ||||||   ||| 
Sbjct: 77  tgcagtccacgtccaacctcctccagctcatggaggagtcctccccggcccaggctcacc 136

                                                                       
Query: 165 tggctaaactccctaagaatctcttggcaaaagcatctcttacaaagaacacagagcaag 224
           |||| ||||| || ||||| ||||||||||||||||||||| |||||||||||| ||| |
Sbjct: 137 tggcaaaacttcccaagaaactcttggcaaaagcatctcttgcaaagaacacagggcagg 196

                                                                       
Query: 225 tgctacaacagctacctaatgtaatttcttccttggatgcttttatggacagtagtttgc 284
           | || || || ||||||| ||||||||||||||||||||||| |||||||  ||||||||
Sbjct: 197 tcctgcatcaactacctagtgtaatttcttccttggatgcttatatggacgctagtttgc 256

               
Query: 285 aaag 288
           ||||
Sbjct: 257 aaag 260
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>gb|DQ244951.1| Zea mays clone 11878 mRNA sequence
          Length = 678

 Score =  159 bits (80), Expect = 1e-35
 Identities = 155/180 (86%)
 Strand = Plus / Plus

                                                                       
Query: 109 gtccacctccaaccttctccagctcatggagcagtcctcccctgcccagatccacttggc 168
           |||||||||||| || |||||||||||||||||||||||||| || ||| | ||||||||
Sbjct: 127 gtccacctccaatctcctccagctcatggagcagtcctcccccgctcaggttcacttggc 186

                                                                       
Query: 169 taaactccctaagaatctcttggcaaaagcatctcttacaaagaacacagagcaagtgct 228
            ||||| || ||||| || |||| |||||||||  || |||||||||| ||||| || ||
Sbjct: 187 aaaactacccaagaacctgttggaaaaagcatcctttgcaaagaacacggagcatgtact 246

                                                                       
Query: 229 acaacagctacctaatgtaatttcttccttggatgcttttatggacagtagtttgcaaag 288
            || ||||||||| | |||||||| ||||||||||||| ||||||||| |||||||||||
Sbjct: 247 gcaccagctacctcaagtaatttcatccttggatgcttatatggacaggagtttgcaaag 306
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>gb|AY109200.1| Zea mays PCO117759 mRNA sequence
          Length = 536

 Score =  151 bits (76), Expect = 4e-33
 Identities = 154/180 (85%)
 Strand = Plus / Plus

                                                                       
Query: 109 gtccacctccaaccttctccagctcatggagcagtcctcccctgcccagatccacttggc 168
           ||||||||||||||| |||||||| ||||||||||||||||| || ||| | || |||||
Sbjct: 105 gtccacctccaacctcctccagctgatggagcagtcctcccccgctcaggttcatttggc 164

                                                                       
Query: 169 taaactccctaagaatctcttggcaaaagcatctcttacaaagaacacagagcaagtgct 228
            ||||| || ||||| ||  ||| |||||||||  || |||||||||||||||| |||||
Sbjct: 165 aaaactaccgaagaacctgctggaaaaagcatcctttgcaaagaacacagagcatgtgct 224

                                                                       
Query: 229 acaacagctacctaatgtaatttcttccttggatgcttttatggacagtagtttgcaaag 288
            || ||||||||| | ||||| || ||||||||||||| ||||||||| |||||||||||
Sbjct: 225 gcaccagctacctcaagtaatatcatccttggatgcttatatggacaggagtttgcaaag 284
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>emb|CT835494.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN068E07, full
           insert sequence
          Length = 847

 Score =  123 bits (62), Expect = 8e-25
 Identities = 101/114 (88%)
 Strand = Plus / Plus

                                                                       
Query: 105 tgcagtccacctccaaccttctccagctcatggagcagtcctcccctgcccagatccact 164
           |||||||||| |||||||| ||||||||||||||| |||||||||| ||||||   ||| 
Sbjct: 103 tgcagtccacgtccaacctcctccagctcatggaggagtcctccccggcccaggctcacc 162

                                                                 
Query: 165 tggctaaactccctaagaatctcttggcaaaagcatctcttacaaagaacacag 218
           |||| ||||| || ||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 163 tggcaaaacttcccaagaaactcttggcaaaagcatctcttgcaaagaacacag 216



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                
Query: 236 ctacctaatgtaatttcttccttggatgcttttatggacagtagtttgcaaag 288
           ||||||| ||||||||||||||||||||||| |||||||  ||||||||||||
Sbjct: 297 ctacctagtgtaatttcttccttggatgcttatatggacgctagtttgcaaag 349



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 298 aagaatactgagcctggagaactcagggttgactgat 334
           ||||| |||||| |||||||||||||| |||| ||||
Sbjct: 447 aagaaaactgagactggagaactcaggattgaatgat 483
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>gb|BT016321.1| Zea mays clone Contig154 mRNA sequence
          Length = 1558

 Score =  103 bits (52), Expect = 7e-19
 Identities = 109/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 161 cacttggctaaactccctaagaatctcttggcaaaagcatctcttacaaagaacacagag 220
           |||||||| ||||| || ||||| || |||| |||||||||  || |||||||||| |||
Sbjct: 432 cacttggcaaaactacccaagaacctgttggaaaaagcatcctttgcaaagaacacggag 491

                                                                       
Query: 221 caagtgctacaacagctacctaatgtaatttcttccttggatgcttttatggacagtagt 280
           || || || || ||||||||| | |||||||| ||||||||||||| ||||||||| |||
Sbjct: 492 catgtactgcaccagctacctcaagtaatttcatccttggatgcttatatggacaggagt 551

                   
Query: 281 ttgcaaag 288
           ||||||||
Sbjct: 552 ttgcaaag 559
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                     
Query: 105      tgcagtccacctccaaccttctccagctcatggagcagtcctcccctgcccag 157
                |||||||||| |||||||| ||||||||||||||| |||||||||| ||||||
Sbjct: 10329899 tgcagtccacgtccaacctcctccagctcatggaggagtcctccccggcccag 10329951



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                     
Query: 236      ctacctaatgtaatttcttccttggatgcttttatggacagtagtttgcaaag 288
                ||||||| ||||||||||||||||||||||| |||||||  ||||||||||||
Sbjct: 10331310 ctacctagtgtaatttcttccttggatgcttatatggacgctagtttgcaaag 10331362



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                      
Query: 165      tggctaaactccctaagaatctcttggcaaaagcatctcttacaaagaacacag 218
                |||| ||||| || ||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 10331176 tggcaaaacttcccaagaaactcttggcaaaagcatctcttgcaaagaacacag 10331229



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 298      aagaatactgagcctggagaactcagggttgactgat 334
                ||||| |||||| |||||||||||||| |||| ||||
Sbjct: 10331631 aagaaaactgagactggagaactcaggattgaatgat 10331667
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>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0444A09
          Length = 125900

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                  
Query: 105   tgcagtccacctccaaccttctccagctcatggagcagtcctcccctgcccag 157
             |||||||||| |||||||| ||||||||||||||| |||||||||| ||||||
Sbjct: 95709 tgcagtccacgtccaacctcctccagctcatggaggagtcctccccggcccag 95761



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                  
Query: 236   ctacctaatgtaatttcttccttggatgcttttatggacagtagtttgcaaag 288
             ||||||| ||||||||||||||||||||||| |||||||  ||||||||||||
Sbjct: 97120 ctacctagtgtaatttcttccttggatgcttatatggacgctagtttgcaaag 97172



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 165   tggctaaactccctaagaatctcttggcaaaagcatctcttacaaagaacacag 218
             |||| ||||| || ||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 96986 tggcaaaacttcccaagaaactcttggcaaaagcatctcttgcaaagaacacag 97039



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 298   aagaatactgagcctggagaactcagggttgactgat 334
             ||||| |||||| |||||||||||||| |||| ||||
Sbjct: 97441 aagaaaactgagactggagaactcaggattgaatgat 97477
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>dbj|AP006105.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT14C19, TM0190,
              complete sequence
          Length = 125299

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 105    tgcagtccacctccaaccttctccagctcatggagcagtcctcccctgcccag 157
              ||||||||||||||||||| ||||| |||||| | || || || |||||||||
Sbjct: 125285 tgcagtccacctccaacctcctccacctcatgcaacaatcttctcctgcccag 125233
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>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete
              sequence
          Length = 178022

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 16     cgacgacgacgacgaccaggag 37
              ||||||||||||||||||||||
Sbjct: 130574 cgacgacgacgacgaccaggag 130595
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 16       cgacgacgacgacgaccaggag 37
                ||||||||||||||||||||||
Sbjct: 20868175 cgacgacgacgacgaccaggag 20868196



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 12       tgtgcgacgacgacgacgac 31
                ||||||||||||||||||||
Sbjct: 12330422 tgtgcgacgacgacgacgac 12330403



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 13       gtgcgacgacgacgacgacc 32
                ||||||||||||||||||||
Sbjct: 21347996 gtgcgacgacgacgacgacc 21348015
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>emb|BX927297.12| Zebrafish DNA sequence from clone DKEY-238M4 in linkage group 16,
              complete sequence
          Length = 132039

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 583    aaccattatatatgtttattgt 604
              ||||||||||||||||||||||
Sbjct: 106787 aaccattatatatgtttattgt 106808
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>ref|NM_001060003.1| Oryza sativa (japonica cultivar-group) Os04g0545600 (Os04g0545600)
           mRNA, complete cds
          Length = 827

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 16  cgacgacgacgacgaccagga 36
           |||||||||||||||||||||
Sbjct: 515 cgacgacgacgacgaccagga 535
to top
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence
          Length = 24543557

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 16      cgacgacgacgacgaccagga 36
               |||||||||||||||||||||
Sbjct: 5829752 cgacgacgacgacgaccagga 5829772
to top
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0053E01, complete sequence
          Length = 180426

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    gtgcgacgacgacgacgacca 33
             |||||||||||||||||||||
Sbjct: 12882 gtgcgacgacgacgacgacca 12862
to top
>gb|AC117472.3| Homo sapiens 3 BAC RP11-567P17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 119730

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 241   taatgtaatttcttccttggatgctttta 269
             ||||||||||||||| |||| ||||||||
Sbjct: 98112 taatgtaatttcttctttggttgctttta 98140
to top
>gb|AC093500.2| Drosophila melanogaster 3L BAC RP98-29P5 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 173558

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     cgacgacgacgacgaccagga 36
              |||||||||||||||||||||
Sbjct: 138034 cgacgacgacgacgaccagga 138054
to top
>gb|AC010716.4| Drosophila melanogaster 3L BAC RP98-11A21 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 173386

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 16    cgacgacgacgacgaccagga 36
             |||||||||||||||||||||
Sbjct: 42963 cgacgacgacgacgaccagga 42983
to top
>tpg|BK000939.1| TPA_inf: Oryza sativa transposon Rim2-M339, complete sequence
          Length = 15678

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 16   cgacgacgacgacgaccagga 36
            |||||||||||||||||||||
Sbjct: 5866 cgacgacgacgacgaccagga 5886
to top
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21,
             complete sequence
          Length = 141787

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    cgacgacgacgacgaccagga 36
             |||||||||||||||||||||
Sbjct: 43389 cgacgacgacgacgaccagga 43369
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 14       tgcgacgacgacgacgaccaggaga 38
                |||||||||||||||||| ||||||
Sbjct: 26190067 tgcgacgacgacgacgacgaggaga 26190091



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 12       tgtgcgacgacgacgacgac 31
                ||||||||||||||||||||
Sbjct: 10642089 tgtgcgacgacgacgacgac 10642070



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 16       cgacgacgacgacgaccaggagat 39
                |||||||||||||||| |||||||
Sbjct: 11096464 cgacgacgacgacgacgaggagat 11096441
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 13       gtgcgacgacgacgacgacca 33
                |||||||||||||||||||||
Sbjct: 15620778 gtgcgacgacgacgacgacca 15620758
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 16       cgacgacgacgacgaccagga 36
                |||||||||||||||||||||
Sbjct: 27307461 cgacgacgacgacgaccagga 27307441



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 16       cgacgacgacgacgaccagg 35
                ||||||||||||||||||||
Sbjct: 23947269 cgacgacgacgacgaccagg 23947250
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 16       cgacgacgacgacgaccagga 36
                |||||||||||||||||||||
Sbjct: 19521074 cgacgacgacgacgaccagga 19521094



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 17       gacgacgacgacgaccaggagatg 40
                ||||||||||||||| ||||||||
Sbjct: 37317731 gacgacgacgacgacgaggagatg 37317754
to top
>emb|AL354945.17| Human DNA sequence from clone RP11-59K17 on chromosome 6, complete
             sequence
          Length = 120745

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   tcttacaaagaacacagagca 222
             |||||||||||||||||||||
Sbjct: 29003 tcttacaaagaacacagagca 29023
to top
>dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0086A10
          Length = 151071

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     cgacgacgacgacgaccagga 36
              |||||||||||||||||||||
Sbjct: 129890 cgacgacgacgacgaccagga 129910
to top
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1191_A10
          Length = 140643

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 14     tgcgacgacgacgacgaccaggaga 38
              |||||||||||||||||| ||||||
Sbjct: 133998 tgcgacgacgacgacgacgaggaga 134022
to top
>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1014_E06
          Length = 112241

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 14    tgcgacgacgacgacgaccaggaga 38
             |||||||||||||||||| ||||||
Sbjct: 22992 tgcgacgacgacgacgacgaggaga 23016
to top
>dbj|AK119259.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-H05, full
           insert sequence
          Length = 827

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 16  cgacgacgacgacgaccagga 36
           |||||||||||||||||||||
Sbjct: 515 cgacgacgacgacgaccagga 535
to top
>ref|XM_307918.2| Anopheles gambiae str. PEST ENSANGP00000021868
           (ENSANGG00000019379), partial mRNA
          Length = 885

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 14  tgcgacgacgacgacgaccaggaga 38
           ||||||||||||||||||| |||||
Sbjct: 832 tgcgacgacgacgacgacctggaga 856
to top
>gb|AY104494.1| Zea mays PCO133236 mRNA sequence
          Length = 1077

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 16  cgacgacgacgacgaccagga 36
           |||||||||||||||||||||
Sbjct: 136 cgacgacgacgacgaccagga 156
to top
>gb|CP000479.1| Mycobacterium avium 104, complete genome
          Length = 5475491

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 16      cgacgacgacgacgaccagg 35
               ||||||||||||||||||||
Sbjct: 3738619 cgacgacgacgacgaccagg 3738638
to top
>emb|CT834240.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA004H04, full
           insert sequence
          Length = 1349

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 16  cgacgacgacgacgaccaggagat 39
           |||||||||||||||| |||||||
Sbjct: 663 cgacgacgacgacgacgaggagat 686
to top
>emb|CR855156.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0116M22,
             complete sequence
          Length = 80856

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    cgacgacgacgacgaccagg 35
             ||||||||||||||||||||
Sbjct: 71126 cgacgacgacgacgaccagg 71107
to top
>emb|CR855151.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0158F13,
            complete sequence
          Length = 94258

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   cgacgacgacgacgaccagg 35
            ||||||||||||||||||||
Sbjct: 6319 cgacgacgacgacgaccagg 6300
to top
>ref|NM_001073631.1| Oryza sativa (japonica cultivar-group) Os12g0574000 (Os12g0574000)
           mRNA, complete cds
          Length = 1992

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  gcgacgacgacgacgaccag 34
           ||||||||||||||||||||
Sbjct: 219 gcgacgacgacgacgaccag 238
to top
>ref|NM_001067981.1| Oryza sativa (japonica cultivar-group) Os08g0282400
          (Os08g0282400) mRNA, complete cds
          Length = 1291

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 16 cgacgacgacgacgaccaggagat 39
          |||||||||||||||| |||||||
Sbjct: 81 cgacgacgacgacgacgaggagat 58
to top
>ref|NM_001063086.1| Oryza sativa (japonica cultivar-group) Os06g0104400 (Os06g0104400)
           mRNA, complete cds
          Length = 1464

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 16  cgacgacgacgacgaccaggagat 39
           |||||||||||||||| |||||||
Sbjct: 598 cgacgacgacgacgacgaggagat 621
to top
>ref|NM_001059629.1| Oryza sativa (japonica cultivar-group) Os04g0479300 (Os04g0479300)
           mRNA, partial cds
          Length = 1126

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 16  cgacgacgacgacgaccagg 35
           ||||||||||||||||||||
Sbjct: 122 cgacgacgacgacgaccagg 141
to top
>ref|NM_001051419.1| Oryza sativa (japonica cultivar-group) Os01g0862600 (Os01g0862600)
           mRNA, complete cds
          Length = 977

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 17  gacgacgacgacgaccaggagatg 40
           ||||||||||||||| ||||||||
Sbjct: 575 gacgacgacgacgacgaggagatg 598
to top
>ref|XM_395056.3| PREDICTED: Apis mellifera similar to CG3973-PA (LOC411586), mRNA
          Length = 2835

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   tgtgcgacgacgacgacgac 31
            ||||||||||||||||||||
Sbjct: 2344 tgtgcgacgacgacgacgac 2363
to top
>ref|XR_009388.1| PREDICTED: Rattus norvegicus similar to tubulin, alpha 1 (LOC366877),
            mRNA
          Length = 1367

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 557  ttggtgtgggttctgtggaa 576
            ||||||||||||||||||||
Sbjct: 1293 ttggtgtgggttctgtggaa 1312
to top
>ref|XR_006099.1| PREDICTED: Rattus norvegicus similar to tubulin, alpha 1 (LOC366877),
            mRNA
          Length = 1367

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 557  ttggtgtgggttctgtggaa 576
            ||||||||||||||||||||
Sbjct: 1293 ttggtgtgggttctgtggaa 1312
to top
>ref|XR_007674.1| PREDICTED: Rattus norvegicus similar to tubulin, alpha 8 like
            (LOC681818), mRNA
          Length = 1400

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 557  ttggtgtgggttctgtggaa 576
            ||||||||||||||||||||
Sbjct: 1348 ttggtgtgggttctgtggaa 1367
to top
>ref|XR_006205.1| PREDICTED: Rattus norvegicus similar to tubulin, alpha 8 like
            (LOC685500), mRNA
          Length = 1400

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 557  ttggtgtgggttctgtggaa 576
            ||||||||||||||||||||
Sbjct: 1348 ttggtgtgggttctgtggaa 1367
to top
>ref|XM_001102827.1| PREDICTED: Macaca mulatta similar to myosin heavy chain 6
            (LOC713471), mRNA
          Length = 11155

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  aaccttctccagctcatgga 138
            ||||||||||||||||||||
Sbjct: 4281 aaccttctccagctcatgga 4262
to top
>emb|CT485999.14| Mouse DNA sequence from clone RP23-340F1 on chromosome 14, complete
              sequence
          Length = 227302

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 553    acctttggtgtgggttctgt 572
              ||||||||||||||||||||
Sbjct: 215136 acctttggtgtgggttctgt 215155
to top
>gb|AC185350.5| Nasonia vitripennis  BAC NV_Bb-46A6 (Clemson University Genomics
             Nasonia vitripennis BAC Library) complete sequence
          Length = 113048

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    tgtgcgacgacgacgacgac 31
             ||||||||||||||||||||
Sbjct: 77493 tgtgcgacgacgacgacgac 77512
to top
>gb|DQ310668.1| Caenestheriella setosa 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 350

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 aaagaaagatcaaaagaata 304
           ||||||||||||||||||||
Sbjct: 195 aaagaaagatcaaaagaata 214
to top
>ref|XM_631451.1| Dictyostelium discoideum AX4 hypothetical protein
           (DDBDRAFT_0188130) mRNA, complete cds
          Length = 579

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 280 tttgcaaagaaagatcaaaa 299
           ||||||||||||||||||||
Sbjct: 292 tttgcaaagaaagatcaaaa 311
to top
>gb|AC161494.3| Mus musculus chromosome 5, clone RP23-295B4, complete sequence
          Length = 182261

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 541    tttaaacttcagacctttgg 560
              ||||||||||||||||||||
Sbjct: 132962 tttaaacttcagacctttgg 132943
to top
>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09,
              complete sequence
          Length = 168192

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     tgtgcgacgacgacgacgac 31
              ||||||||||||||||||||
Sbjct: 129578 tgtgcgacgacgacgacgac 129559
to top
>ref|XM_595090.2| PREDICTED: Bos taurus similar to F28C1.3a (LOC516932), mRNA
          Length = 1821

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 15  gcgacgacgacgacgaccaggaga 38
           |||||||| |||||||||||||||
Sbjct: 83  gcgacgactacgacgaccaggaga 106
to top
>gb|AC153600.8| Mus musculus 6 BAC RP23-380C10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 194848

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 540    ttttaaacttcagacctttg 559
              ||||||||||||||||||||
Sbjct: 188299 ttttaaacttcagacctttg 188280
to top
>gb|AC153597.13| Mus musculus 6 BAC RP23-18K9 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 197694

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 540    ttttaaacttcagacctttg 559
              ||||||||||||||||||||
Sbjct: 192027 ttttaaacttcagacctttg 192046
to top
>gb|AC127246.3| Mus musculus BAC clone RP24-424L20 from chromosome 16, complete
             sequence
          Length = 181475

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   tgcttttatggacagtagtt 281
             ||||||||||||||||||||
Sbjct: 42783 tgcttttatggacagtagtt 42802
to top
>ref|XM_541588.2| PREDICTED: Canis familiaris similar to Multiple EGF-like-domain
            protein 4 (LOC484474), mRNA
          Length = 8370

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 442  caggtggcaggtggcgctgg 461
            ||||||||||||||||||||
Sbjct: 2622 caggtggcaggtggcgctgg 2603
to top
>gb|AC113596.8| Mus musculus chromosome 5, clone RP23-374B20, complete sequence
          Length = 203500

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 541    tttaaacttcagacctttgg 560
              ||||||||||||||||||||
Sbjct: 193151 tttaaacttcagacctttgg 193170
to top
>gb|AC163723.3| Mus musculus BAC clone RP23-450O11 from chromosome 16, complete
             sequence
          Length = 181338

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   tgcttttatggacagtagtt 281
             ||||||||||||||||||||
Sbjct: 90981 tgcttttatggacagtagtt 91000
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      cgacgacgaccaggagatgg 41
               ||||||||||||||||||||
Sbjct: 3285230 cgacgacgaccaggagatgg 3285211
to top
>ref|XM_387476.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07300.1)
           partial mRNA
          Length = 1578

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 555 ctttggtgtgggttctgtgg 574
           ||||||||||||||||||||
Sbjct: 24  ctttggtgtgggttctgtgg 5
to top
>gb|AC165292.2| Mus musculus BAC clone RP23-319D22 from chromosome 10, complete
             sequence
          Length = 192726

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   caaaagcatctcttacaaag 211
             ||||||||||||||||||||
Sbjct: 40904 caaaagcatctcttacaaag 40885
to top
>ref|NM_069916.2| Caenorhabditis elegans Proline HYdroxylase family member (phy-2)
            (phy-2) mRNA, complete cds
          Length = 1718

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 481  ttgttgcttactggtgtttc 500
            ||||||||||||||||||||
Sbjct: 1667 ttgttgcttactggtgtttc 1686
to top
>emb|Z69637.1|CEF35G2 Caenorhabditis elegans Cosmid F35G2, complete sequence
          Length = 35379

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 481   ttgttgcttactggtgtttc 500
             ||||||||||||||||||||
Sbjct: 23567 ttgttgcttactggtgtttc 23548
to top
>emb|CR847806.15| Zebrafish DNA sequence from clone CH211-267J10 in linkage group 8,
              complete sequence
          Length = 151455

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    aagtgctacaacagctacct 241
              ||||||||||||||||||||
Sbjct: 113629 aagtgctacaacagctacct 113610
to top
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
             sequence
          Length = 147117

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    gtgcgacgacgacgacgacc 32
             ||||||||||||||||||||
Sbjct: 23009 gtgcgacgacgacgacgacc 23028
to top
>ref|NM_172944.1| Mus musculus integrin, alpha E, epithelial-associated (Itgae),
            transcript variant 2, mRNA
 dbj|AK040983.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530055J10 product:integrin,
            alpha E, epithelial-associated, full insert sequence
          Length = 3814

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 434  gcaagactcaggtggcaggt 453
            ||||||||||||||||||||
Sbjct: 3392 gcaagactcaggtggcaggt 3373
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>gb|AC112184.2| Homo sapiens chromosome 5 clone RP11-168A11, complete sequence
          Length = 173346

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   gtaatttcttccttggatgc 264
             ||||||||||||||||||||
Sbjct: 49215 gtaatttcttccttggatgc 49196
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 15       gcgacgacgacgacgaccag 34
                ||||||||||||||||||||
Sbjct: 23724524 gcgacgacgacgacgaccag 23724505
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 16       cgacgacgacgacgaccagg 35
                ||||||||||||||||||||
Sbjct: 12438066 cgacgacgacgacgaccagg 12438047
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 16     cgacgacgacgacgaccaggagat 39
              |||||||||||||||| |||||||
Sbjct: 307046 cgacgacgacgacgacgaggagat 307023



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 15       gcgacgacgacgacgaccag 34
                ||||||||||||||||||||
Sbjct: 28903894 gcgacgacgacgacgaccag 28903913
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>gb|AC092846.5| Homo sapiens BAC clone RP11-617A17 from 4, complete sequence
          Length = 197540

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 543    taaacttcagacctttggtgtggg 566
              ||||||||||| ||||||||||||
Sbjct: 123088 taaacttcagatctttggtgtggg 123065
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>emb|AL139342.7| Human DNA sequence from clone RP5-1016N21 on chromosome 1q42.13-43
             Contains the 5' end of a novel gene (FLJ11383), complete
             sequence
          Length = 151553

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 535   acttcttttaaacttcagac 554
             ||||||||||||||||||||
Sbjct: 73344 acttcttttaaacttcagac 73363
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>emb|AL117376.28|HSDJ971B4 Human DNA sequence from clone RP5-971B4 on chromosome 20 Contains the
            3' end of the C20orf23 gene for a novel protein similar
            to KIF1 type and other kinesin-like proteins, complete
            sequence
          Length = 162213

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  cccagatccacttggctaaa 172
            ||||||||||||||||||||
Sbjct: 1059 cccagatccacttggctaaa 1040
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>emb|AL133456.1| Human DNA sequence from clone RP1-231P7P on chromosome 22q11.21-12.2
             Contains a ca repeat polymorphism, an STS and GSSs,
             complete sequence
          Length = 80485

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 533   ttacttcttttaaacttcag 552
             ||||||||||||||||||||
Sbjct: 12327 ttacttcttttaaacttcag 12346
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>gb|AC124908.3| Equus caballus clone CH241-67M21, complete sequence
          Length = 170710

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 531   ggttacttcttttaaacttc 550
             ||||||||||||||||||||
Sbjct: 43898 ggttacttcttttaaacttc 43879
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>gb|AC158979.2| Mus musculus BAC clone RP23-218C24 from chromosome 14, complete
             sequence
          Length = 216848

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 553   acctttggtgtgggttctgt 572
             ||||||||||||||||||||
Sbjct: 65246 acctttggtgtgggttctgt 65265
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>gb|DQ088967.1| Homo sapiens calcium-sensing receptor (hypocalciuric hypercalcemia 1,
             severe neonatal hyperparathyroidism) (CASR) gene, complete
             cds
          Length = 106794

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   aactccctaagaatctcttg 190
             ||||||||||||||||||||
Sbjct: 33658 aactccctaagaatctcttg 33639
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>emb|AL670399.4| Mouse DNA sequence from clone RP23-263M10 on chromosome 11 Contains the
              3' end of the Atp2a3 gene for ubiquitous Ca++ transporting
              ATPase, the P2rx1 and P2rx5 genes for purinergic receptor
              P2X ligand-gated ion channel 1 and 5, 111 novel genes, the
              Camkk1 gene for calcium/calmodulin-dependent protein kinase
              kinase 1 alpha, the Itgae gene for epithelial-associated
              integrin alpha E, the Gsg2 gene for germ cell-specific gene
              2 protein, the gene for a novel protein similar to human
              tax interacting protein 1, the Ctns gene for nephropathic
              cystinosis protein and five CpG islands, complete sequence
          Length = 224037

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 434    gcaagactcaggtggcaggt 453
              ||||||||||||||||||||
Sbjct: 158273 gcaagactcaggtggcaggt 158254
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>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18,
              complete sequence
          Length = 176615

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     cgacgacgacgacgaccagg 35
              ||||||||||||||||||||
Sbjct: 112242 cgacgacgacgacgaccagg 112223
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>gb|AF332861.1|AF332860S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, intron 5,
             partial sequence
          Length = 89994

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 553   acctttggtgtgggttctgt 572
             ||||||||||||||||||||
Sbjct: 54275 acctttggtgtgggttctgt 54294
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>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0423B08
          Length = 151490

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    gacgacgacgacgaccaggagatg 40
             ||||||||||||||| ||||||||
Sbjct: 29765 gacgacgacgacgacgaggagatg 29788
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>gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 from chromosome unknown,
             complete sequence
          Length = 161382

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 566   gttctgtggaactgtcaaac 585
             ||||||||||||||||||||
Sbjct: 84564 gttctgtggaactgtcaaac 84545
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>gb|AF289866.1|AF289866 Mus musculus integrin alpha-E (Itgae) gene, partial cds; and haploid
            germ cell-specific nuclear protein kinase (Gsg2) gene,
            complete cds
          Length = 4425

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 434  gcaagactcaggtggcaggt 453
            ||||||||||||||||||||
Sbjct: 4062 gcaagactcaggtggcaggt 4081
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>gb|AC144800.3| Mus musculus BAC clone RP24-257N2 from chromosome 10, complete sequence
          Length = 170671

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   caaaagcatctcttacaaag 211
             ||||||||||||||||||||
Sbjct: 85725 caaaagcatctcttacaaag 85744
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>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0644B06
          Length = 194509

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    cgacgacgacgacgaccaggagat 39
             |||||||||||||||| |||||||
Sbjct: 16999 cgacgacgacgacgacgaggagat 16976
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>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0468G03
          Length = 143918

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    gcgacgacgacgacgaccag 34
             ||||||||||||||||||||
Sbjct: 53938 gcgacgacgacgacgaccag 53957
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>dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0613B07
          Length = 191756

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    cgacgacgacgacgaccagg 35
             ||||||||||||||||||||
Sbjct: 82348 cgacgacgacgacgaccagg 82329
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>dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1446H11
          Length = 135488

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    cgacgacgacgacgaccaggagat 39
             |||||||||||||||| |||||||
Sbjct: 67070 cgacgacgacgacgacgaggagat 67047
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>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_F05
          Length = 134247

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    tgtgcgacgacgacgacgac 31
             ||||||||||||||||||||
Sbjct: 69729 tgtgcgacgacgacgacgac 69710
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>gb|AC068754.16| Homo sapiens 3 BAC RP11-79M2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 83248

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   aactccctaagaatctcttg 190
             ||||||||||||||||||||
Sbjct: 11414 aactccctaagaatctcttg 11395
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>dbj|AK108344.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-B04, full
           insert sequence
          Length = 977

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 17  gacgacgacgacgaccaggagatg 40
           ||||||||||||||| ||||||||
Sbjct: 575 gacgacgacgacgacgaggagatg 598
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>dbj|AK106088.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B05, full
           insert sequence
          Length = 1126

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 16  cgacgacgacgacgaccagg 35
           ||||||||||||||||||||
Sbjct: 122 cgacgacgacgacgaccagg 141
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>dbj|AK103829.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148A06, full
           insert sequence
          Length = 1819

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 16  cgacgacgacgacgaccaggagat 39
           |||||||||||||||| |||||||
Sbjct: 663 cgacgacgacgacgacgaggagat 686
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>dbj|AK100935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136I24,
          full insert sequence
          Length = 1292

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 16 cgacgacgacgacgaccaggagat 39
          |||||||||||||||| |||||||
Sbjct: 82 cgacgacgacgacgacgaggagat 59
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>dbj|AK069006.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003I08, full
           insert sequence
          Length = 1994

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  gcgacgacgacgacgaccag 34
           ||||||||||||||||||||
Sbjct: 221 gcgacgacgacgacgaccag 240
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>dbj|AK060638.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D03, full
           insert sequence
          Length = 1464

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 16  cgacgacgacgacgaccaggagat 39
           |||||||||||||||| |||||||
Sbjct: 598 cgacgacgacgacgacgaggagat 621
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>dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0560B10, complete sequence
          Length = 108295

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    cgacgacgacgacgaccaggagat 39
             |||||||||||||||| |||||||
Sbjct: 54980 cgacgacgacgacgacgaggagat 54957
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>dbj|AP004243.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-312N17, complete
              sequences
          Length = 167368

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 443    aggtggcaggtggcgctgga 462
              ||||||||||||||||||||
Sbjct: 105034 aggtggcaggtggcgctgga 105015
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>emb|CT025577.11| Mouse DNA sequence from clone RP24-172I18 on chromosome 12, complete
              sequence
          Length = 143997

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    ctcttacaaagaacacagag 220
              ||||||||||||||||||||
Sbjct: 100736 ctcttacaaagaacacagag 100755
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>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 128795

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    gcgacgacgacgacgaccag 34
             ||||||||||||||||||||
Sbjct: 31094 gcgacgacgacgacgaccag 31113
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>emb|AL096757.1|HSJ231P7P Human DNA sequence from clone 231P7p on chromosome 22q11.21-12.2
             Contains CA repeat and STS, complete sequence
          Length = 80485

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 533   ttacttcttttaaacttcag 552
             ||||||||||||||||||||
Sbjct: 12327 ttacttcttttaaacttcag 12346
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>emb|AL607108.17| Mouse DNA sequence from clone RP23-42F6 on chromosome 11, complete
              sequence
          Length = 202842

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    gtgctacaacagctacctaa 243
              ||||||||||||||||||||
Sbjct: 179298 gtgctacaacagctacctaa 179317
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>dbj|AB036930.1| Mus musculus genes for integrin aM290, haspin, partial and complete
            cds
          Length = 7530

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 434  gcaagactcaggtggcaggt 453
            ||||||||||||||||||||
Sbjct: 5134 gcaagactcaggtggcaggt 5153


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 112,224,704
Number of extensions: 6400355
Number of successful extensions: 183747
Number of sequences better than 10.0: 104
Number of HSP's gapped: 183733
Number of HSP's successfully gapped: 120
Length of query: 630
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 608
Effective length of database: 18,508,616,841
Effective search space: 11253239039328
Effective search space used: 11253239039328
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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