ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf88c08 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os05g45950:12005.t04083:unspliced-genomic outer mitochondrial membrane protein porin, putative, expressed| Length = 3497 Score = 94.1 bits (199), Expect = 3e-18 Identities = 45/117 (38%), Positives = 69/117 (58%) Frame = +3 / +1 Query: 1113 LILSEGDVDASFTMENADILTATYYKKLDETTSIGAKAQRVLSLNDNSLEVGFSHALDPN 1292 LIL + A+F D L A+YY K+ +T+++GA+ S N+N+L G HALD Sbjct: 2665 LILVVTE*FANFRNNKGDSLAASYYHKVSKTSAVGAELAHSFSSNENTLTFGTQHALDEL 2844 Query: 1293 TTVKAKLSSDGAVSVLLRYDPKPKCYIAFSAESKTQASQKETKFGLCVVLGA*VPPS 1463 TTVKA+ ++ G S L++++ +PK + S E T+A K +K GL +VL * P+ Sbjct: 2845 TTVKARFNNFGMASALIQHEFRPKSLVTISTEVDTKAIDKSSKVGLSLVLKP*RSPA 3015 Score = 40.0 bits (81), Expect(2) = 0.041 Identities = 30/84 (35%), Positives = 33/84 (39%) Frame = -2 / -1 Query: 1465 KEGGTHAPSTTHKPNLVSF*EAWVLDSAEKAM*HLGLGSYRSRTLTAPSLLSFAFTVVFG 1286 K G T P L A V S E LGL S L P LL AFTVV Sbjct: 3017 KAGDLQGLRTRDSPTLELLSMALVSTSVEMVTSDLGLNSCWMSALAMPKLLKRAFTVVSS 2838 Query: 1285 SRA*EKPTSRELSFKDRTRCALAP 1214 SRA P R S ++ + AP Sbjct: 2837 SRACCVPKVRVFSLLEKL*ASSAP 2766 Score = 23.5 bits (45), Expect(2) = 0.041 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = -2 / -1 Query: 877 GIDRSPFKPGL 845 G+DR PF+PG+ Sbjct: 1994 GMDRIPFRPGV 1962
>LOC_Os01g51770:12001.t04607:unspliced-genomic outer mitochondrial membrane protein porin, putative, expressed| Length = 3180 Score = 86.3 bits (182), Expect(2) = 4e-18 Identities = 38/86 (44%), Positives = 55/86 (63%) Frame = +3 / +2 Query: 1206 TSIGAKAQRVLSLNDNSLEVGFSHALDPNTTVKAKLSSDGAVSVLLRYDPKPKCYIAFSA 1385 T+ GA+ S +N+L G HALDP TTVKA+ ++ G VS L++++ +PK ++ SA Sbjct: 2636 TAAGAELTHSFSTKENTLSFGMQHALDPLTTVKARYNNHGMVSALIQHEWRPKSFLTLSA 2815 Query: 1386 ESKTQASQKETKFGLCVVLGA*VPPS 1463 E T+A K +K GL +VL * PPS Sbjct: 2816 EVDTKAIDKASKVGLSLVLKP*CPPS 2893 Score = 31.8 bits (63), Expect(2) = 4e-18 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +3 / +3 Query: 906 DLHCRHLGACITGSSELQGSPIVCLSAVIGTRNIALGADFSLVTKS 1043 +L H A I+ L P+V LS V G +++A+GAD ++ T + Sbjct: 2148 ELQYLHDYAGISLGVGLTSKPLVNLSGVFGNKSVAVGADVAVDTST 2285 Score = 50.6 bits (104), Expect = 3e-05 Identities = 35/84 (41%), Positives = 41/84 (48%) Frame = -2 / -1 Query: 1465 KEGGTHAPSTTHKPNLVSF*EAWVLDSAEKAM*HLGLGSYRSRTLTAPSLLSFAFTVVFG 1286 +EGG T+ P L + A V SAE LGL S R LT P LL AFTVV G Sbjct: 2895 QEGGHQGLRTSDSPTLEALSIALVSTSAESVKKDLGLHSCWMRALTMPWLL*RAFTVVRG 2716 Query: 1285 SRA*EKPTSRELSFKDRTRCALAP 1214 SRA P R S ++ + AP Sbjct: 2715 SRACCIPKLRVFSLVEKLWVSSAP 2644
>LOC_Os09g19734:12009.t01708:unspliced-genomic isochorismate synthase 1, chloroplast precursor, putative, expressed| Length = 9737 Score = 74.8 bits (157), Expect(2) = 2e-17 Identities = 33/79 (41%), Positives = 47/79 (59%) Frame = +3 / +3 Query: 1206 TSIGAKAQRVLSLNDNSLEVGFSHALDPNTTVKAKLSSDGAVSVLLRYDPKPKCYIAFSA 1385 T++GA+ S N+NSL G H LDP T VKA+ ++ G S LL+++ +PK SA Sbjct: 2874 TAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISA 3053 Query: 1386 ESKTQASQKETKFGLCVVL 1442 E T+A K +K G+ V L Sbjct: 3054 EVDTKAIDKSSKVGIAVAL 3110 Score = 42.3 bits (86), Expect(2) = 2e-17 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = +3 / +1 Query: 906 DLHCRHLGACITGSSELQGSPIVCLSAVIGTRNIALGADFSLVTKSFN 1049 +L H A ++ S L SP+V LS+V GT+ +A+GAD SL T + N Sbjct: 1966 ELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGN 2109 Score = 40.0 bits (81), Expect(2) = 0.004 Identities = 26/63 (41%), Positives = 29/63 (46%) Frame = -2 / -2 Query: 1402 AWVLDSAEKAM*HLGLGSYRSRTLTAPSLLSFAFTVVFGSRA*EKPTSRELSFKDRTRCA 1223 A V SAE GL S S L P LL AFT V GSR P RE S ++ + Sbjct: 3070 ALVSTSAEMVHTDFGLHSCWSSALALPELLKRAFTTVSGSRVCWVPKVREFSLLEKLWVS 2891 Query: 1222 LAP 1214 AP Sbjct: 2890 SAP 2882 Score = 28.6 bits (56), Expect(2) = 0.004 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -2 / -1 Query: 1036 VTSEKSAPKAMFLVPITADKQTIG 965 V+SE SAP A LVP T ++ T G Sbjct: 2096 VSSETSAPTARALVPKTLERLTTG 2025
>LOC_Os01g40570:12001.t03581:unspliced-genomic outer plastidial membrane protein porin, putative, expressed| Length = 2508 Score = 78.5 bits (165), Expect = 1e-13 Identities = 36/88 (40%), Positives = 55/88 (62%) Frame = +3 / +2 Query: 1191 KLDETTSIGAKAQRVLSLNDNSLEVGFSHALDPNTTVKAKLSSDGAVSVLLRYDPKPKCY 1370 K T++GA+ S N+++L G H+LDP+TTVKA+ ++ G S L++++ +PK Sbjct: 1883 KHHSNTAVGAELSHSFSRNESTLIFGSQHSLDPHTTVKARFNNYGMASALVQHEWRPKSL 2062 Query: 1371 IAFSAESKTQASQKETKFGLCVVLGA*V 1454 I S E T+A +K TK GL +VL *V Sbjct: 2063 ITISGEVDTKAIEKSTKVGLSLVLKH*V 2146 Score = 41.4 bits (84), Expect = 0.018 Identities = 31/80 (38%), Positives = 36/80 (45%) Frame = -2 / -1 Query: 1453 THAPSTTHKPNLVSF*EAWVLDSAEKAM*HLGLGSYRSRTLTAPSLLSFAFTVVFGSRA* 1274 T ST KP V F A V S E + LG S + L P LL AFTVV GS Sbjct: 2145 TQCLSTKDKPTFVLFSIALVSTSPEMVISDLGRHSCWTSALAMP*LLKRAFTVV*GSNEC 1966 Query: 1273 EKPTSRELSFKDRTRCALAP 1214 P LSF ++ + AP Sbjct: 1965 WDPKISVLSFLEKLWDSSAP 1906 Score = 34.1 bits (68), Expect = 2.9 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = -3 / -2 Query: 1368 SIWAWGHIGAGRSLLHHC*ASPSQSCSDPGHEKSQLQESCHS 1243 +IW H G R H C*+ PS SC P +Q HS Sbjct: 2060 AIWDAIHAGRARWPCHSC*SEPSLSCEGPMSAGTQRSVCSHS 1935
>LOC_Os03g10510:12003.t00853:unspliced-genomic outer mitochondrial membrane protein porin, putative, expressed| Length = 3763 Score = 75.8 bits (159), Expect = 8e-13 Identities = 33/91 (36%), Positives = 56/91 (61%) Frame = +3 / +3 Query: 1170 LTATYYKKLDETTSIGAKAQRVLSLNDNSLEVGFSHALDPNTTVKAKLSSDGAVSVLLRY 1349 ++ Y+ + +S+ A+ R LS N+N+L VG + +DP T VKA+L++ G ++ LL++ Sbjct: 3120 VSGVYHLDDKQKSSVVAELTRRLSTNENTLTVGGLYKVDPETAVKARLNNTGKLAALLQH 3299 Query: 1350 DPKPKCYIAFSAESKTQASQKETKFGLCVVL 1442 + KPK + S E T+A + KFGL + L Sbjct: 3300 EVKPKSVLTISGEFDTKALDRPPKFGLALAL 3392 Score = 47.8 bits (98), Expect = 2e-04 Identities = 31/78 (39%), Positives = 37/78 (47%) Frame = -2 / -1 Query: 1441 STTHKPNLVSF*EAWVLDSAEKAM*HLGLGSYRSRTLTAPSLLSFAFTVVFGSRA*EKPT 1262 S + +PNL +A V +S E LGL S R + P LLS AFT V GS PT Sbjct: 3391 SASARPNLGGLSKALVSNSPEIVKTDLGLTSCWRRAASFPVLLSLAFTAVSGSTLYRPPT 3212 Query: 1261 SRELSFKDRTRCALAPME 1208 R SF + R A E Sbjct: 3211 VRVFSFVESLRVNSATTE 3158
>LOC_Os03g04460:12003.t00324:unspliced-genomic outer mitochondrial membrane protein porin, putative, expressed| Length = 3777 Score = 61.6 bits (128), Expect = 2e-08 Identities = 25/84 (29%), Positives = 47/84 (55%) Frame = +3 / +2 Query: 1209 SIGAKAQRVLSLNDNSLEVGFSHALDPNTTVKAKLSSDGAVSVLLRYDPKPKCYIAFSAE 1388 ++ A+ L +N +G SHA+D +T +K + S+ G V VL +++ +PK ++ SAE Sbjct: 2939 TVAAEVTHKLKTKENYFTIGSSHAIDSSTLLKTRFSNGGKVGVLCQHEWRPKSTVSISAE 3118 Query: 1389 SKTQASQKETKFGLCVVLGA*VPP 1460 + ++FG+ + L *+ P Sbjct: 3119 YDPKVVSSPSRFGVAIALKP*LSP 3190
>LOC_Os04g38810:12004.t03451:unspliced-genomic actin binding protein, putative, expressed| Length = 3122 Score = 40.5 bits (82), Expect = 0.035 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +3 / -2 Query: 33 PRPWPCPVELSHPPLVLPPTSQRTYQDSHSPRP*RLM 143 P P PCP LS P L P++ T+ S SP P L+ Sbjct: 301 PPPCPCPCRLSRSPRALAPSNNLTFSSSPSPSPSSLL 191
>LOC_Os04g41229:12004.t03684:unspliced-genomic DNA binding protein, putative, expressed| Length = 7802 Score = 38.6 bits (78), Expect = 0.12 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = +3 / -3 Query: 30 PPRPWPCPVELSHPPLVLPP 89 PP PWPCP E+S PL PP Sbjct: 492 PPWPWPCPSEISAAPLPPPP 433
>LOC_Os04g11350:12004.t00963:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5017 Score = 37.3 bits (75), Expect = 0.32 Identities = 20/82 (24%), Positives = 36/82 (43%) Frame = -3 / -1 Query: 1608 FLAKMSFSIQPMNITGNSTS*ETRNQRMRLHPPAHTVPYATKNQGPKLKKVALTPLAQHI 1429 +L +S +++ ++ S +++ M + P T + + G K + AQ Sbjct: 3559 YLLNLSTTVRMTDLPRTRGSASMKSRAMSVQTPWGTGRGSRRPAGLKCSDL*RWHTAQER 3380 Query: 1428 NQTWFPSERLGSWTQRRRRCSI 1363 Q+W LG W RRRRC + Sbjct: 3379 TQSWTSCFMLGMWNSRRRRCMV 3314
>LOC_Os09g18480:12009.t01633:unspliced-genomic ligA, putative| Length = 1269 Score = 31.8 bits (63), Expect(2) = 0.60 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +3 / -2 Query: 51 PVELSHPPLVLPPTSQRTYQDSHSPRP 131 PV +HP V PP + R S SP+P Sbjct: 1214 PVHENHPATVAPPAAARRRPSSRSPQP 1134 Score = 26.3 bits (51), Expect(2) = 0.60 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +2 / -2 Query: 257 TSGPTKAGPSGRR*IVQPRAKQP 325 TS P+ GPSGRR V R P Sbjct: 827 TSPPSSPGPSGRRLPVLARGTPP 759
>LOC_Os03g50780:12003.t04413:unspliced-genomic PHD-finger family protein, expressed| Length = 3465 Score = 30.4 bits (60), Expect(2) = 0.81 Identities = 9/38 (23%), Positives = 20/38 (52%) Frame = -2 / +2 Query: 706 ILSICRLLLTNLCIPLVFLCMMLLIYLYRHLDSHCWLL 593 ++ + +L ++C+ L +C L + + HCW+L Sbjct: 2216 VIPLLATILCDVCLMLKHVCFTLALRNMKSQHQHCWML 2329 Score = 28.6 bits (56), Expect(2) = 0.81 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = -3 / +2 Query: 1425 QTWFPSERLGSWTQRRRRCSIWAWGHIGAGRSLL 1324 Q WF S W++ R C+IW H G LL Sbjct: 1229 QQWFWSPCHAPWSRWRLHCTIWP*HHGHLGLPLL 1330
>LOC_Os04g41100:12004.t03671:unspliced-genomic PITSLRE serine/threonine-protein kinase CDC2L1, putative, expressed| Length = 6277 Score = 35.9 bits (72), Expect = 0.83 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +3 / -1 Query: 18 LLSSPPRPWPCPVELSHPPLVLPPTSQRTYQDSHSPRP 131 LL R WP P + S PPL+ PP+ +R+ S P Sbjct: 571 LLGGGERRWPYPFDNSLPPLLRPPSRRRSASQRGSESP 458
>LOC_Os10g41340:12010.t03370:unspliced-genomic palmitoyl-protein thioesterase 1 precursor, putative, expressed| Length = 5910 Score = 35.4 bits (71), Expect = 1.1 Identities = 12/27 (44%), Positives = 20/27 (74%) Frame = -2 / +1 Query: 703 LSICRLLLTNLCIPLVFLCMMLLIYLY 623 + IC LLL LCI ++ LC++L++ L+ Sbjct: 1942 MQICSLLLVPLCIAVLLLCLLLVLSLF 2022
>LOC_Os03g56990:12003.t04968:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4122 Score = 35.4 bits (71), Expect = 1.1 Identities = 18/39 (46%), Positives = 19/39 (48%) Frame = +3 / -2 Query: 18 LLSSPPRPWPCPVELSHPPLVLPPTSQRTYQDSHSPRP* 134 LLS PPRP P P PPL PP + PRP* Sbjct: 809 LLSVPPRPLPRPCPPPRPPLPPPPRPVPRPRGLPPPRP* 693
>LOC_Os05g32530:12005.t02849:unspliced-genomic mannosylglycoprotein endo-beta-mannosidase, putative, expressed| Length = 8895 Score = 34.5 bits (69), Expect(2) = 1.4 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = +3 / +3 Query: 33 PRPWPCPVELSHPPLVLPPTSQRTYQDSHSPRP*RLML 146 P WP P S PP PPT R + P P R L Sbjct: 216 PPRWPSPASSSPPPTRRPPTRSRRHPGCTPPSPARTSL 329 Score = 24.9 bits (48), Expect(2) = 1.4 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +3 / +3 Query: 741 LVLLCGGSEQIGKPSLRFELSSDTKLIKLTIDN 839 L L GG+EQ+ + L +D KL + + N Sbjct: 6333 LALWVGGNEQVPPVDINKALKNDLKLHPMFVSN 6431
>LOC_Os05g49260:12005.t04359:unspliced-genomic solute carrier family 2, facilitated glucose transporter member 8,| putative, expressed Length = 3737 Score = 28.1 bits (55), Expect(3) = 1.5 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +3 / +2 Query: 24 SSPPRPWPCPVELSHPPLVLPPTSQRTYQDSHSP 125 +SPP PWP + PP +S+ +S SP Sbjct: 209 ASPPPPWPPSGSPTSPPSSARSSSRSAPSNSDSP 310 Score = 26.3 bits (51), Expect(3) = 1.5 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = +2 / +1 Query: 638 KHHAEEDKGDAEVGEKQPADGENACF 715 + H D+ A+ G P GEN CF Sbjct: 499 RRHGRSDRQWADGGVHWPERGENLCF 576 Score = 24.0 bits (46), Expect(3) = 1.5 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = +1 / +1 Query: 868 CLFLSPPGAHQ 900 CLFL PP HQ Sbjct: 3403 CLFLDPPS*HQ 3435
>LOC_Os02g31300:12002.t02822:unspliced-genomic UBX domain containing protein| Length = 702 Score = 31.8 bits (63), Expect(2) = 1.5 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +3 / +1 Query: 30 PPRPWPCPVELSHPPLVLPPTSQRTYQDS 116 PP P P PV + PP+ +P ++ +QD+ Sbjct: 244 PPPPPPPPVPVVRPPMPVPARTESFFQDA 330 Score = 24.0 bits (46), Expect(2) = 1.5 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = +2 / +1 Query: 650 EEDKGDAEVGEKQPADGENAC 712 EE+ GDA + +GE AC Sbjct: 370 EEEDGDAASDYGEATEGEEAC 432
>LOC_Os07g44480:12007.t04088:unspliced-genomic peroxidase, putative, expressed| Length = 1753 Score = 35.0 bits (70), Expect = 1.6 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -3 / -2 Query: 1395 SWTQRRRRCSIWAWGHIGAGRSLLHHC*ASPSQS 1294 +W R R WAW IG R+ H C*A S++ Sbjct: 255 AWACRSRARRSWAWWKIGCRRARAHRC*ARRSRA 154
>LOC_Os06g31290:12006.t02830:unspliced-genomic conserved hypothetical protein| Length = 327 Score = 29.9 bits (59), Expect(2) = 1.8 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 / -2 Query: 255 PLPALRRLDRQGDDESFSREPSSPMAESDFRLRPPVR 365 PLP R R+G + + P+ P S F L PP R Sbjct: 185 PLPPSARSGREGARGAAAGRPAPPSPPSAFPLPPPAR 75 Score = 24.4 bits (47), Expect(2) = 1.8 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = +3 / -2 Query: 24 SSPPRPWPCPVELSHPPLVLPP 89 SSPP P P P PP PP Sbjct: 287 SSPPPPSPPPPPSPPPPPSPPP 222
>LOC_Os02g25400:12002.t02237:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2126 Score = 26.7 bits (52), Expect(3) = 1.8 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +3 / -3 Query: 30 PPRPWPCPVELSHPPLVLPPTSQRTYQDSHSPR 128 PPRP P P + PP LP + + + +PR Sbjct: 1227 PPRPPPGPSRPTQPPEPLPSSVRTRAARALTPR 1129 Score = 25.8 bits (50), Expect(3) = 1.8 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = +3 / -3 Query: 387 MPSRRSKLLFSSLP 428 +P RRS+LLF+ LP Sbjct: 444 LPRRRSRLLFAGLP 403 Score = 24.0 bits (46), Expect(3) = 1.8 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +3 / -2 Query: 315 PSSPMAESDFRLRPPV 362 PSSP++ + RL+PP+ Sbjct: 730 PSSPLSRAAGRLQPPL 683
>LOC_Os12g03470:12012.t00240:unspliced-genomic alpha-N-arabinofuranosidase A precursor, putative, expressed| Length = 7078 Score = 34.5 bits (69), Expect = 2.1 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = -2 / +3 Query: 727 NLMKKASILSICRLLLTNLCIPLVFLCMMLLIYLYRHLDSHCWLL 593 NL +K IC L N I L+FLC M Y H + C+ L Sbjct: 4590 NLHRKTLQGDICFLHYFN*YIILIFLCHMFFFLFYTHSNIRCYFL 4724
>LOC_Os07g22420:12007.t01946:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6289 Score = 34.5 bits (69), Expect = 2.1 Identities = 19/67 (28%), Positives = 28/67 (41%) Frame = -3 / +3 Query: 1374 RCSIWAWGHIGAGRSLLHHC*ASPSQSCSDPGHEKSQLQESCHSKTEHVAPWHQWRSSHL 1195 RCS ++ +G C* P+ S DP H+K S P H +S + Sbjct: 4380 RCSADSFHDSASGGCPFSSC*RKPTISSGDPKHKKPLKTSRNFSLLHQFWPHHICKSHYC 4559 Query: 1194 ASCSKLL 1174 +C +LL Sbjct: 4560 YTCQRLL 4580
>LOC_Os06g11430:12006.t01020:unspliced-genomic FIP1, putative, expressed| Length = 3020 Score = 26.3 bits (51), Expect(2) = 2.2 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = +3 / +2 Query: 30 PPRPWPCPVELSHPP 74 PP PWP P + PP Sbjct: 140 PPSPWPPPPPIRLPP 184 Score = 25.4 bits (49), Expect(2) = 2.2 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +3 / +2 Query: 69 PPLVLPPTSQRTYQDSHSPRP*R 137 PP+ LPP S+R + S R *R Sbjct: 164 PPIRLPPRSRRGRRPSRGARS*R 232
>LOC_Os07g15640:12007.t01427:unspliced-genomic CRR4, putative, expressed| Length = 5935 Score = 34.1 bits (68), Expect = 2.9 Identities = 17/37 (45%), Positives = 17/37 (45%) Frame = +3 / +2 Query: 27 SPPRPWPCPVELSHPPLVLPPTSQRTYQDSHSPRP*R 137 SPP P P S PP PP S T S SP P R Sbjct: 134 SPPTPLATPPPRSAPPAPPPPPSPTTPSSSASPGPGR 244
>LOC_Os06g07800:12006.t00662:unspliced-genomic hypothetical protein| Length = 1743 Score = 34.1 bits (68), Expect = 2.9 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +3 / +1 Query: 15 FLLSSPPRPWPCPVELSHP 71 F+L S P PWPCPV P Sbjct: 313 FILVSSPAPWPCPVRWGKP 369
>LOC_Os04g15580:12004.t01325:unspliced-genomic serine/threonine-protein kinase receptor precursor, putative,| expressed Length = 3317 Score = 34.1 bits (68), Expect = 2.9 Identities = 20/79 (25%), Positives = 27/79 (34%) Frame = -3 / -2 Query: 1419 WFPSERLGSWTQRRRRCSIWAWGHIGAGRSLLHHC*ASPSQSCSDPGHEKSQLQESCHSK 1240 W R G W RRC + W A S S +S + P + + SC S+ Sbjct: 691 W*SRRRTGRWAPSTRRCGLSCWPCSSARNSRWARWCPSGDRSSAIPQTRSAAARRSCRSR 512 Query: 1239 TEHVAPWHQWRSSHLASCS 1183 + H R S S Sbjct: 511 AAQPSLQHHHRRRRRCSNS 455
>LOC_Os04g05820:12004.t00463:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4004 Score = 34.1 bits (68), Expect = 2.9 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 / -1 Query: 51 PVELSHPPLVLPPTSQRTYQDSHSPRP 131 PV +HP V PPT+ R S SP+P Sbjct: 377 PVHENHPATVAPPTAARRRPSSRSPQP 297
>LOC_Os03g06200:12003.t00489:unspliced-genomic phosphoserine aminotransferase, chloroplast precursor, putative,| expressed Length = 1820 Score = 34.1 bits (68), Expect = 2.9 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = +3 / +2 Query: 27 SPPRPWPCPVELSHPPLVLPPTSQRTYQDSHSPR 128 SP RPWP P PP PPT+ T PR Sbjct: 188 SPARPWPRPRSPPPPPPPPPPTAGSTTSPRARPR 289
>LOC_Os01g72720:12001.t06559:unspliced-genomic hypothetical protein| Length = 1226 Score = 33.1 bits (66), Expect(2) = 3.4 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +3 / +2 Query: 24 SSPPRPWPCPVELSHPPLVLPPTSQRT 104 +S PR WPC S P PP S R+ Sbjct: 176 ASSPRSWPCSSSTSTPETTAPPPSPRS 256 Score = 22.1 bits (42), Expect(2) = 3.4 Identities = 9/23 (39%), Positives = 12/23 (52%) Frame = +1 / +1 Query: 262 RPYEGWTVRETMNRSAASQAAPW 330 RPY+ T + AAS +PW Sbjct: 1036 RPYQW*TGAVPLKEKAASFLSPW 1104
>LOC_Os11g07370:12011.t00628:unspliced-genomic hypothetical protein| Length = 1879 Score = 33.6 bits (67), Expect = 4.1 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -3 / -1 Query: 1398 GSWTQRRRRCSIWAWGHIGAGRSL 1327 G W+ RR RC IW GH GR + Sbjct: 1000 G*WSSRRGRCRIWRRGHRRGGRRI 929
>LOC_Os06g45430:12006.t04231:unspliced-genomic cell division control protein 50, putative, expressed| Length = 3494 Score = 33.6 bits (67), Expect = 4.1 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +3 / -3 Query: 15 FLLSSPPRPWPCPVELSHPPLVLPPTS 95 FLL++PP P P P P LVLPP + Sbjct: 357 FLLAAPPPPPPSPSTPDPPLLVLPPAA 277
>LOC_Os05g06990:12005.t00588:unspliced-genomic protein kinase, putative, expressed| Length = 2775 Score = 33.6 bits (67), Expect = 4.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / -1 Query: 559 PVSCPETSSDCPEASSGCPGAC 624 PV+C SS C +GCPG C Sbjct: 1476 PVACVAVSSRCISGPAGCPGTC 1411
>LOC_Os02g28980:12002.t02592:unspliced-genomic peptidyl-prolyl isomerase, putative, expressed| Length = 4466 Score = 33.6 bits (67), Expect = 4.1 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = +3 / -1 Query: 24 SSPPRPWPCPVELSHPPLVLPPTSQRTYQDSHSPRP 131 SSPP P P P S PP PP+ R PRP Sbjct: 284 SSPPAPPPPPYRSSMPPPPKPPSPPRPPIPPSPPRP 177
>LOC_Os12g33080:12012.t03001:unspliced-genomic 2-oxoglutarate/malate translocator, chloroplast precursor,| putative, expressed Length = 3518 Score = 30.9 bits (61), Expect(2) = 4.8 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = +3 / +2 Query: 27 SPPRPWPCPVELSHPPLVLPPTSQRTYQDSHSPRP 131 SPP P P P PL LPP + S PRP Sbjct: 137 SPPLPPPPPPLPLPLPLPLPPHPTHPFSSSSPPRP 241 Score = 25.4 bits (49), Expect(2) = 4.8 Identities = 8/24 (33%), Positives = 14/24 (58%) Frame = +1 / +2 Query: 697 WRECLLFS*DWQKGFWFFCVVALS 768 W+ECL + W WF ++A++ Sbjct: 2114 WKECLGEAVAWDTLTWFAALIAMA 2185
>LOC_Os10g36620:12010.t02941:unspliced-genomic sulfated surface glycoprotein 185 precursor, putative, expressed| Length = 693 Score = 28.1 bits (55), Expect(2) = 5.0 Identities = 9/21 (42%), Positives = 11/21 (52%) Frame = +3 / +1 Query: 33 PRPWPCPVELSHPPLVLPPTS 95 PRPWP P PP + P + Sbjct: 319 PRPWPPPPPHPQPPFPISPVA 381 Score = 25.8 bits (50), Expect(2) = 5.0 Identities = 8/18 (44%), Positives = 13/18 (72%) Frame = +1 / +3 Query: 790 DLSCHLIQSLSNLQLIMC 843 D+SC +QSL N+ ++ C Sbjct: 585 DVSCTRVQSLKNVHVLRC 638
>LOC_Os12g28620:12012.t02572:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2985 Score = 33.1 bits (66), Expect = 5.6 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = +3 / -1 Query: 21 LSSPPRPWPCPVELSHPPLVLPPTSQRTYQDSHSPRP 131 L+SPP PWP P LS P + RT SP P Sbjct: 1422 LASPPIPWPRPRHLSRPLQGIHWRPHRTRLAQPSPAP 1312
>LOC_Os12g28100:12012.t02520:unspliced-genomic NBS-LRR disease resistance protein, putative, expressed| Length = 6941 Score = 33.1 bits (66), Expect = 5.6 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +3 / -1 Query: 33 PRPWPCPVELSHPPLVLPPTSQRTYQDSHSPRP*RLMLG 149 P P PCP + P V PPT++R + + RP R G Sbjct: 2939 PPPPPCPAQPLPPHPVAPPTARRARRTRAAARPARAREG 2823
>LOC_Os09g10570:12009.t00849:unspliced-genomic hypothetical protein| Length = 4844 Score = 33.1 bits (66), Expect = 5.6 Identities = 12/39 (30%), Positives = 23/39 (58%) Frame = -2 / -3 Query: 682 LTNLCIPLVFLCMMLLIYLYRHLDSHCWLLDSHCWSLDR 566 +T L +P FLC + + + + + +HC+ L+ CW+ R Sbjct: 531 VTYLLMPTRFLCFLW*VAIDQGVFTHCFPLNQFCWNRGR 415
>LOC_Os05g51590:12005.t04584:unspliced-genomic N-rich protein, putative, expressed| Length = 1439 Score = 33.1 bits (66), Expect = 5.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -3 / -1 Query: 1446 PLAQHINQTWFPSERLGSWTQRRRRC 1369 P A H + W P LG+WT+RR C Sbjct: 977 PPAAHRSCAWPPEPALGTWTRRRGTC 900
>LOC_Os03g17900:12003.t01564:unspliced-genomic catalytic/ hydrolase, putative, expressed| Length = 5270 Score = 33.1 bits (66), Expect = 5.6 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -3 / +3 Query: 1410 SERLGSWTQRRRRCSIWAWG 1351 S R GSW++RRR C WA G Sbjct: 354 SRRGGSWSRRRRCCGCWAAG 413
>LOC_Os03g03010:12003.t00187:unspliced-genomic hypothetical protein| Length = 545 Score = 33.1 bits (66), Expect = 5.6 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = +3 / +1 Query: 30 PPRPWPCPVELSHPP 74 PPRPWPC S PP Sbjct: 112 PPRPWPCAATYSTPP 156
>LOC_Os02g17620:12002.t01555:unspliced-genomic expressed protein| Length = 8553 Score = 33.1 bits (66), Expect = 5.6 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = -2 / -1 Query: 730 ANLMKKASILSICRLLLTNLCIPLVFLCMMLLIYLYRHLDSHCW 599 +N +KK + S C +L IP+ L M L+Y++ +L + C+ Sbjct: 3615 SNQLKKKVVSSTCVILPAICHIPICLL*MFFLLYIFPYLLARCF 3484
>LOC_Os01g49180:12001.t04358:unspliced-genomic ATP binding protein, putative, expressed| Length = 11653 Score = 33.1 bits (66), Expect = 5.6 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = -3 / +1 Query: 381 TAFTGSSLAVVDGNPIPP 328 TAF+ SSLA++ G PIPP Sbjct: 5197 TAFSASSLAMITGTPIPP 5250
>LOC_Os07g28080:12007.t02499:unspliced-genomic hypothetical protein| Length = 1045 Score = 27.6 bits (54), Expect(2) = 5.6 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 / -2 Query: 9 SFFLLSSPPRPWPCPVELS 65 +FFLL P P PC +LS Sbjct: 324 AFFLLRGPSPPLPCSAQLS 268 Score = 22.6 bits (43), Expect(2) = 5.6 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = +3 / -2 Query: 69 PPLVLPPTSQRTYQDSHSPRP 131 PP++LP Q+ S SP P Sbjct: 180 PPVLLPAKEQKRRGPS*SPSP 118
>LOC_Os04g55810:12004.t05053:unspliced-genomic expressed protein| Length = 4382 Score = 30.9 bits (61), Expect(2) = 5.8 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +1 / +3 Query: 223 WPWRNVDDAAHHFRPYEGW 279 W WRN D A ++P GW Sbjct: 1518 WRWRNSDTTALEWKPLHGW 1574 Score = 25.4 bits (49), Expect(2) = 5.8 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = +1 / +2 Query: 1123 QKETWTLLSQWKM 1161 QKE W +L +WK+ Sbjct: 3533 QKEEWCILQKWKL 3571
>LOC_Os12g12830:12012.t01151:unspliced-genomic latency associated nuclear antigen, putative| Length = 615 Score = 32.7 bits (65), Expect = 7.6 Identities = 14/24 (58%), Positives = 14/24 (58%) Frame = +3 / -3 Query: 24 SSPPRPWPCPVELSHPPLVLPPTS 95 S PP P P P LS PP PPTS Sbjct: 406 SPPPSPPPPPHSLSRPPPSSPPTS 335
>LOC_Os11g31880:12011.t02785:unspliced-genomic fructose-2,6-bisphosphatase, putative, expressed| Length = 4466 Score = 32.7 bits (65), Expect = 7.6 Identities = 17/37 (45%), Positives = 17/37 (45%) Frame = +3 / +3 Query: 30 PPRPWPCPVELSHPPLVLPPTSQRTYQDSHSPRP*RL 140 PP P P P PPT RT SH PRP RL Sbjct: 69 PPPPPWAPPTPPTPRCPRPPTWTRTTTTSHRPRPPRL 179
>LOC_Os11g08080:12011.t00699:unspliced-genomic SWIRM domain containing protein, expressed| Length = 8635 Score = 32.7 bits (65), Expect = 7.6 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = -2 / +2 Query: 739 SLFANLMKKASILSICRLLLTNLCIP 662 S+FAN M S+ I LLLT LC+P Sbjct: 1652 SVFANPMNTCSVFCIIILLLTALCLP 1729
>LOC_Os10g32960:12010.t02604:unspliced-genomic peroxisome assembly protein 12, putative, expressed| Length = 4900 Score = 32.7 bits (65), Expect = 7.6 Identities = 19/60 (31%), Positives = 30/60 (50%) Frame = +1 / -2 Query: 1060 LLTPLKPSS*DFPSTPVV*FCQKETWTLLSQWKMPTFSQQLTTRS*MRRPPLVPRRNVFC 1239 LL P + S+*D TP +K+TWT++ + ++L RS* ++ R FC Sbjct: 1695 LLKP*QVSA*DHTMTPKKNHLKKKTWTVIITEALRCLKEKLVQRS*TQQILYSKRTLCFC 1516
>LOC_Os08g01550:12008.t00054:unspliced-genomic hypothetical protein| Length = 669 Score = 32.7 bits (65), Expect = 7.6 Identities = 14/35 (40%), Positives = 15/35 (42%) Frame = +3 / -3 Query: 24 SSPPRPWPCPVELSHPPLVLPPTSQRTYQDSHSPR 128 SSPP P P S PP PP +R PR Sbjct: 562 SSPPAPAPAAASSSTPPTPTPPRLRRPRASRRGPR 458
>LOC_Os07g41050:12007.t03761:unspliced-genomic VEP1, putative, expressed| Length = 1555 Score = 32.7 bits (65), Expect = 7.6 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = +3 / -3 Query: 30 PPRPWPCPVELSHPPLVLPPTSQRT 104 P RPWP S PP PPT RT Sbjct: 1016 PSRPWPPSAPPSSPPPRTPPTPPRT 942
>LOC_Os07g36020:12007.t03274:unspliced-genomic latency associated nuclear antigen, putative| Length = 615 Score = 32.7 bits (65), Expect = 7.6 Identities = 14/24 (58%), Positives = 14/24 (58%) Frame = +3 / -3 Query: 24 SSPPRPWPCPVELSHPPLVLPPTS 95 S PP P P P LS PP PPTS Sbjct: 406 SPPPSPPPPPHSLSRPPPSSPPTS 335
>LOC_Os04g13610:12004.t01180:unspliced-genomic latency associated nuclear antigen, putative| Length = 615 Score = 32.7 bits (65), Expect = 7.6 Identities = 14/24 (58%), Positives = 14/24 (58%) Frame = +3 / -3 Query: 24 SSPPRPWPCPVELSHPPLVLPPTS 95 S PP P P P LS PP PPTS Sbjct: 406 SPPPSPPPPPHSLSRPPPSSPPTS 335
>LOC_Os02g34080:12002.t03049:unspliced-genomic XIB, putative, expressed| Length = 21889 Score = 32.7 bits (65), Expect = 7.6 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 / -3 Query: 422 PSRIANTYNEIVKLLPHAGWPAYLL 496 P R+ Y+EI+ LL AGWP + L Sbjct: 6023 PPRLVRVYSEILVLLIAAGWPGHTL 5949
>LOC_Os02g56020:12002.t05176:unspliced-genomic methyltransferase WBSCR22, putative, expressed| Length = 3051 Score = 30.4 bits (60), Expect(2) = 7.7 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 / +2 Query: 706 ILSICRLLLTNLCIPLVFLCMMLLI 632 IL CRL +T + IPL+F+C+ + + Sbjct: 2252 ILLYCRLYIT*VVIPLLFVCVCVCV 2326 Score = 24.9 bits (48), Expect(2) = 7.7 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = -3 / +2 Query: 84 EELGEDERARQGMAMAVEE 28 +E EDE RQG +A+E+ Sbjct: 2630 KEEAEDEEERQGQGLALEQ 2686
>LOC_Os07g06870:12007.t00566:unspliced-genomic hypothetical protein| Length = 1600 Score = 27.6 bits (54), Expect(3) = 7.7 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +1 / +3 Query: 778 NHL*DLSCHLIQSLSNLQLIMC 843 N L +LSC L++S S ++ MC Sbjct: 1119 NRLLELSCGLLESTSKFEVYMC 1184 Score = 23.5 bits (45), Expect(3) = 7.7 Identities = 7/17 (41%), Positives = 9/17 (52%) Frame = +1 / +1 Query: 217 QPWPWRNVDDAAHHFRP 267 +PWPW + D A P Sbjct: 424 EPWPWFDAHDQADKCGP 474 Score = 22.1 bits (42), Expect(3) = 7.7 Identities = 12/47 (25%), Positives = 21/47 (44%) Frame = +2 / +3 Query: 392 ISKVETPVFFPSRIANTYNEIVKLLPHAGWPAYLLEKYSEKGCSDVC 532 +S + FFP +T+ I LL + + +LLE + + C Sbjct: 528 VSDLTLLTFFPLHGKHTHISISSLLYY*KFKVFLLENFVRRPICFCC 668
>LOC_Os10g33440:12010.t02644:unspliced-genomic NB-ARC domain containing protein, expressed| Length = 6345 Score = 29.9 bits (59), Expect(2) = 8.0 Identities = 8/17 (47%), Positives = 9/17 (52%) Frame = -3 / -2 Query: 1398 GSWTQRRRRCSIWAWGH 1348 G W RCS W+W H Sbjct: 4910 GGWPPALARCSTWSWSH 4860 Score = 26.3 bits (51), Expect(2) = 8.0 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = -3 / -1 Query: 990 SRQISKLLAIPVAQNFQL 937 S +S LLA+PV+ NF+L Sbjct: 3402 SGTLSSLLAVPVSTNFEL 3349
>LOC_Os09g06499:12009.t00446:unspliced-genomic sulfate transporter 4.1, chloroplast precursor, putative, expressed| Length = 18987 Score = 30.9 bits (61), Expect(2) = 8.3 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 / +1 Query: 1389 TQRRRRCSIWAWGHIGAGRSLLHHC 1315 T+RR S +W +GAGR L+HC Sbjct: 361 TRRRAPASSASWRVVGAGRCGLYHC 435 Score = 26.7 bits (52), Expect(2) = 8.3 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -1 / +2 Query: 482 AIRHEVVILRSHCKC*R 432 A R EVVI R C+C*R Sbjct: 14522 ASREEVVISRRRCRC*R 14572
>LOC_Os04g48160:12004.t04335:unspliced-genomic calmodulin binding protein, putative, expressed| Length = 2603 Score = 30.9 bits (61), Expect(2) = 9.0 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +3 / -2 Query: 30 PPRPWPCPVELSHPPLVLPPTS 95 PP P PC ++ PP PPT+ Sbjct: 391 PPHPTPCTPAVASPPSAPPPTA 326 Score = 24.0 bits (46), Expect(2) = 9.0 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +3 / -3 Query: 249 SAPLPALRRLDRQGDDE 299 SAPLPALRR + + E Sbjct: 129 SAPLPALRRSGKMEERE 79
>LOC_Os05g07440:12005.t00628:unspliced-genomic expressed protein| Length = 713 Score = 29.5 bits (58), Expect(2) = 9.2 Identities = 13/34 (38%), Positives = 15/34 (44%) Frame = +3 / -3 Query: 30 PPRPWPCPVELSHPPLVLPPTSQRTYQDSHSPRP 131 PP P P S PPL PP+ Y+ P P Sbjct: 624 PPPPLPSRAPPSPPPLRAPPSPPPPYRTPPPPLP 523 Score = 23.5 bits (45), Expect(2) = 9.2 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +2 / -3 Query: 1544 SYDVELPVMFIG*ILKLILARKGFVNRCGL 1633 SY + +P+ I L+L GFV RCG+ Sbjct: 141 SYHLLIPICI*IWIEILLLFGVGFVMRCGI 52
>LOC_Os06g04470:12006.t00337:unspliced-genomic expressed protein| Length = 3915 Score = 27.6 bits (54), Expect(2) = 9.5 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -3 / +2 Query: 1032 RAKSQHLKQCFLCQSRQISKLL 967 RA+ Q +K+C C+ I KLL Sbjct: 515 RARFQTIKRCVFCKKNSIRKLL 580 Score = 27.6 bits (54), Expect(2) = 9.5 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -2 / +1 Query: 691 RLLLTNLCIPLVFLCMMLLIYLYRHLDSHCWLLDSH 584 R L T L +PL LC M + L RH + C L H Sbjct: 1405 R*LHTPLPLPLHLLCSMTTLKLRRHHSAACGHLLGH 1512 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 676,165,274 Number of extensions: 11350564 Number of successful extensions: 56201 Number of sequences better than 10.0: 61 Length of query: 551 Length of database: 55,613,886 Length adjustment: 51 Effective length of query: 500 Effective length of database: 52,743,708 Effective search space: 26371854000 Effective search space used: 26371854000 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
