>Q6K548:VDAC1_ORYSJ Outer mitochondrial membrane protein porin - Oryza sativa subsp.|
            japonica (Rice)
          Length = 274
 Score =  107 bits (268), Expect = 1e-22
 Identities = 73/216 (33%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
 Frame = +3

Query: 801  SSDTKLIKLTIDNVLRPXXXXXXXXXXXXXXXXXVDLHCRHLGACITGSSELQGSPIVCL 980
            +SD+ ++     + L P                  +L   H  A ++ S  L  SP+V L
Sbjct: 71   NSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNL 130

Query: 981  SAVIGTRNIALGADFSLVTKSFNALGAADSVETKLLRFPKYTCGLILSEGDVDASFTMEN 1160
            S+V GT+ +A+GAD SL T + N                KY  GL  S  D+ AS  + N
Sbjct: 131  SSVFGTKALAVGADVSLDTATGN--------------LTKYNAGLSFSNDDLIASLNLNN 176

Query: 1161 -ADILTATYYKKLDET-TSIGAKAQRVLSLNDNSLEVGFSHALDPNTTVKAKLSSDGAVS 1334
              D LTA+YY  ++ + T++GA+     S N+NSL  G  H LDP T VKA+ ++ G  S
Sbjct: 177  KGDSLTASYYHIVNHSATAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKAS 236

Query: 1335 VLLRYDPKPKCYIAFSAESKTQASQKETKFGLCVVL 1442
             LL+++ +PK     SAE  T+A  K +K G+ V L
Sbjct: 237  ALLQHEWRPKSVWTISAEVDTKAIDKSSKVGIAVAL 272

>P46274:VDAC1_WHEAT Outer mitochondrial membrane protein porin - Triticum aestivum|
            (Wheat)
          Length = 275

 Score =  104 bits (260), Expect = 1e-21
 Identities = 70/216 (32%), Positives = 106/216 (49%), Gaps = 2/216 (0%)
 Frame = +3

Query: 801  SSDTKLIKLTIDNVLRPXXXXXXXXXXXXXXXXXVDLHCRHLGACITGSSELQGSPIVCL 980
            S+   +  +T D++  P                 V+L   H  A I  S  L  +P+V L
Sbjct: 72   SASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNL 131

Query: 981  SAVIGTRNIALGADFSLVTKSFNALGAADSVETKLLRFPKYTCGLILSEGDVDASFTMEN 1160
            S   GT  +A+GAD SL T + N              F KY   L  +  D+ AS  + N
Sbjct: 132  SGAFGTSALAVGADVSLDTATKN--------------FAKYNAALSYTNQDLIASLNLNN 177

Query: 1161 -ADILTATYYKKLDET-TSIGAKAQRVLSLNDNSLEVGFSHALDPNTTVKAKLSSDGAVS 1334
              D LTA+YY  ++++ T++GA+     S N+NSL  G  H LDP T VKA++++ G  S
Sbjct: 178  KGDSLTASYYHIVEKSGTAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKAS 237

Query: 1335 VLLRYDPKPKCYIAFSAESKTQASQKETKFGLCVVL 1442
             L++++  PK     SAE  T+A +K +K G+ + L
Sbjct: 238  ALIQHEFMPKSLCTISAEVDTKAIEKSSKVGIAIAL 273

>Q9SRH5:VDAC1_ARATH Outer mitochondrial membrane protein porin 1 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 276

 Score =  100 bits (248), Expect = 2e-20
 Identities = 65/183 (35%), Positives = 99/183 (54%), Gaps = 3/183 (1%)
 Frame = +3

Query: 903  VDLHCRHLGACITGSSELQGSPIVCLSAVIGTRNIALGADFSLVTKSFNALGAADSVETK 1082
            V+L   H  A I+ S  L  +P V  S VIG+  +A+G D S  TKS N           
Sbjct: 106  VELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGN----------- 154

Query: 1083 LLRFPKYTCGLILSEGDVDASFTM-ENADILTATYYKKLDE--TTSIGAKAQRVLSLNDN 1253
               F K   GL  ++ D+ AS T+ +  D+L A+YY  ++    T++GA+    LS  D+
Sbjct: 155  ---FTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSSKDS 211

Query: 1254 SLEVGFSHALDPNTTVKAKLSSDGAVSVLLRYDPKPKCYIAFSAESKTQASQKETKFGLC 1433
            ++ VG  H+LDP T+VKA+++S G  S L++++ KPK +   S E  T++  K  K GL 
Sbjct: 212  TITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKSAKVGLA 271

Query: 1434 VVL 1442
            + L
Sbjct: 272  LAL 274

>P42056:VDAC2_SOLTU 36 kDa outer mitochondrial membrane protein porin - Solanum tuberosum|
            (Potato)
          Length = 276

 Score = 99.4 bits (246), Expect = 4e-20
 Identities = 65/183 (35%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
 Frame = +3

Query: 903  VDLHCRHLGACITGSSELQGSPIVCLSAVIGTRNIALGADFSLVTKSFNALGAADSVETK 1082
            V+L   H  A I  S  L  SP+V  S V G   +ALG D S  T + N           
Sbjct: 106  VELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGN----------- 154

Query: 1083 LLRFPKYTCGLILSEGDVDASFTM-ENADILTATYYKKLDETTS--IGAKAQRVLSLNDN 1253
               F K   GL  S  D+ AS  + +  D ++A+YY  +   T+  +GA+     S N+N
Sbjct: 155  ---FTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNEN 211

Query: 1254 SLEVGFSHALDPNTTVKAKLSSDGAVSVLLRYDPKPKCYIAFSAESKTQASQKETKFGLC 1433
            +L +G  H LDP TTVKA+++S G  S L++++ +PK     S E  T+A +K  K GL 
Sbjct: 212  TLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKSAKIGLA 271

Query: 1434 VVL 1442
            V L
Sbjct: 272  VAL 274

>P42055:VDAC1_SOLTU 34 kDa outer mitochondrial membrane protein porin - Solanum tuberosum|
            (Potato)
          Length = 276

 Score = 98.2 bits (243), Expect = 9e-20
 Identities = 66/177 (37%), Positives = 91/177 (51%), Gaps = 3/177 (1%)
 Frame = +3

Query: 921  HLGACITGSSELQGSPIVCLSAVIGTRNIALGADFSLVTKSFNALGAADSVETKLLRFPK 1100
            H  A I  S  L  +PIV  S V+GT  IALG D S  TK+ +              F K
Sbjct: 112  HDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGD--------------FTK 157

Query: 1101 YTCGLILSEGDVDASFTMEN-ADILTATYYKKLDETTS--IGAKAQRVLSLNDNSLEVGF 1271
               GL  +  D+ AS  + N  D LTA+YY  +   TS  +GA+     S N+N + VG 
Sbjct: 158  CNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGT 217

Query: 1272 SHALDPNTTVKAKLSSDGAVSVLLRYDPKPKCYIAFSAESKTQASQKETKFGLCVVL 1442
             H LDP T+VKA++++ G  S LL+++ +PK     S E  T++  K  KFGL + L
Sbjct: 218  QHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDKGAKFGLALAL 274

>P42054:VDAC_PEA Outer plastidial membrane protein porin - Pisum sativum (Garden pea)|
          Length = 276

 Score = 97.8 bits (242), Expect = 1e-19
 Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
 Frame = +3

Query: 903  VDLHCRHLGACITGSSELQGSPIVCLSAVIGTRNIALGADFSLVTKSFNALGAADSVETK 1082
            V+L   H  A I+ S  L+ +PIV  S+VIGT  +A GAD S               +TK
Sbjct: 106  VELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISF--------------DTK 151

Query: 1083 LLRFPKYTCGLILSEGDVDASFTM-ENADILTATYYKKLD--ETTSIGAKAQRVLSLNDN 1253
            L    K    +   + D+  S T+ E  D+L+A+YY  ++    T++G       S  +N
Sbjct: 152  LGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISHRFSTKEN 211

Query: 1254 SLEVGFSHALDPNTTVKAKLSSDGAVSVLLRYDPKPKCYIAFSAESKTQASQKETKFGLC 1433
            +  +G  HALDP TTVK ++++ G  S L++++ +PK  I  S+E  T+A +K  K GL 
Sbjct: 212  TFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTKAIEKSAKIGLS 271

Query: 1434 VVL 1442
            + L
Sbjct: 272  LAL 274

>P42057:VDAC_MAIZE Outer plastidial membrane protein porin - Zea mays (Maize)|
          Length = 277

 Score = 94.4 bits (233), Expect = 1e-18
 Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 3/217 (1%)
 Frame = +3

Query: 801  SSDTKLIKLTIDNVLRPXXXXXXXXXXXXXXXXXVDLHCRHLGACITGSSELQGSPIVCL 980
            S    L  +T+D    P                 ++    H  A +  S  L  +P+V L
Sbjct: 73   SESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNL 132

Query: 981  SAVIGTRNIALGADFSLVTKSFNALGAADSVETKLLRFPKYTCGLILSEGDVDASFTMEN 1160
            S   G++ +++G D S  T + +              F KY   L L+  D+ AS  + N
Sbjct: 133  SGAFGSKALSVGVDVSFDTATSD--------------FTKYNAALSLTSPDLIASLHLNN 178

Query: 1161 -ADILTATYYK--KLDETTSIGAKAQRVLSLNDNSLEVGFSHALDPNTTVKAKLSSDGAV 1331
              D L A+YY   K    T++GA+    +S N+++L  G  H+LDP+TT+K + ++ G  
Sbjct: 179  HGDTLVASYYHLVKNHSGTAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMA 238

Query: 1332 SVLLRYDPKPKCYIAFSAESKTQASQKETKFGLCVVL 1442
            S L++++ +PK ++  S +  T+A +K TK GL +VL
Sbjct: 239  SALVQHEWRPKSFVTISGDVDTKAIEKSTKVGLSLVL 275

>Q9SMX3:VDAC2_ARATH Outer mitochondrial membrane protein porin 2 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 274

 Score = 90.5 bits (223), Expect = 2e-17
 Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
 Frame = +3

Query: 921  HLGACITGSSELQGSPIVCLSAVIGTRNIALGADFSLVTKSFNALGAADSVETKLLRFPK 1100
            H  A I+ S     +PIV  S V+GT  ++LG D +  T+S N              F  
Sbjct: 112  HDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGN--------------FKH 157

Query: 1101 YTCGLILSEGDVDASFTM-ENADILTATYYKKLDETTSIGAKAQRVLSLNDNSLEVGFSH 1277
            +  G   ++ D+ AS  + +  + L A+YY+ +  +T +GA+     +  +N++ VG  H
Sbjct: 158  FNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSPSTVVGAEISHNFTTKENAITVGTQH 217

Query: 1278 ALDPNTTVKAKLSSDGAVSVLLRYDPKPKCYIAFSAESKTQASQKETKFGLCVVL 1442
            ALDP TTVKA++++ G  + L++++ +PK +   S E  ++A  K  K G+ + L
Sbjct: 218  ALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKSAKVGIALAL 272

>P07144:VDAC_NEUCR Outer mitochondrial membrane protein porin - Neurospora crassa|
          Length = 283

 Score = 38.5 bits (88), Expect = 0.084
 Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 5/159 (3%)
 Frame = +3

Query: 951  ELQGSPIVCLSAVIGTRNIALGADFSLVTKSFNALGAADSVETKLLRFPKYTCGLILSEG 1130
            +L   P   + A++G      GA      +     G + +V       P Y+  +  ++ 
Sbjct: 129  DLLKGPTANIDAIVGHEGFLAGASAGYDVQKAAITGYSAAVG---YHAPTYSAAITATD- 184

Query: 1131 DVDASFTMENADILTATYYKKLDETTSIGAKAQ-RVLSLNDNSLEVGFSHALDPNTTVKA 1307
                     N  + +A+YY K++     G+KA     + N   LEV   + +DP + VK 
Sbjct: 185  ---------NLSVFSASYYHKVNSQVEAGSKATWNSKTGNTVGLEVATKYRIDPVSFVKG 235

Query: 1308 KLSSDG----AVSVLLRYDPKPKCYIAFSAESKTQASQK 1412
            K++  G    A +VLLR         +F  +   QA+ K
Sbjct: 236  KINDRGVAAIAYNVLLREGVTLGVGASFDTQKLDQATHK 274


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 283,812,092
Number of extensions: 6124128
Number of successful extensions: 17347
Number of sequences better than 10.0: 9
Number of HSP's gapped: 17301
Number of HSP's successfully gapped: 9
Length of query: 551
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 433
Effective length of database: 68,319,629
Effective search space: 29582399357
Effective search space used: 29582399357
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)