Clone Name | FLbaf88a10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK073993:Os03g0618900 | 35 | 0.25 | 2 | AK107081:Os06g0547500 | 34 | 0.43 | 3 | AK071346:Os06g0114900 | 31 | 2.8 | 4 | AK121480:Os12g0547100 | 31 | 3.6 | 5 | AK105589:Os12g0547100 | 31 | 3.6 | 6 | AK108761:Os08g0168000 | 30 | 8.0 |
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>AK073993:Os03g0618900 | Length = 271 Score = 34.7 bits (78), Expect = 0.25 Identities = 26/77 (33%), Positives = 30/77 (38%) Frame = +1 Query: 190 QLHPLPCRRPLVPHLPARLSPSA*PSRLLCCW*QPREEHAVQGRRC*PSSPPLRCAHGTP 369 ++ P CR P +P ARL P P Q R V RR PSSP HG P Sbjct: 130 RIWPPRCRIPSLPRRRARLPPPGSPRSAPSPSRQRRRVAVVTPRRRHPSSP-----HGCP 184 Query: 370 CSRSGEGRTRLQASAQW 420 + S G T W Sbjct: 185 ATNSDGGETERGEEGGW 201
>AK107081:Os06g0547500 | Length = 212 Score = 33.9 bits (76), Expect = 0.43 Identities = 25/59 (42%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +2 Query: 263 RLVSSVAGDSRGRSTQCRGGDASRPPHPYAA-LMAPHVPDLERDGRGYKHRRNGPWRCG 436 R VSS A R RG D RPP P L +P +P L R G G RR WR G Sbjct: 32 RGVSSGAAGGERRGLWERGSDG-RPPSPRRIRLPSPPLPSLPRPGGGEGRRRRCSWREG 89
>AK071346:Os06g0114900 | Length = 102 Score = 31.2 bits (69), Expect = 2.8 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = -1 Query: 264 RSGGRGEASGKMG---NKGAAAWERMELGGEKETSGNGDHAM 148 R+G A+G MG + G WE E E+E GNGD M Sbjct: 41 RAGAVATAAGSMGRCCHAGEKKWEEKEKEKEEEEEGNGDGRM 82
>AK121480:Os12g0547100 | Length = 117 Score = 30.8 bits (68), Expect = 3.6 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +2 Query: 299 RSTQCRGGDASRPPHPYAALMAPHVPDLERDGRGYKHRRNGPWRCGRRPR 448 RS + G RPP P ++ + P GRG++ +R+GP C R R Sbjct: 60 RSARRGTGGGRRPPFPLSSQIRPV-------GRGHRRQRHGPPLCSSRGR 102
>AK105589:Os12g0547100 | Length = 117 Score = 30.8 bits (68), Expect = 3.6 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +2 Query: 299 RSTQCRGGDASRPPHPYAALMAPHVPDLERDGRGYKHRRNGPWRCGRRPR 448 RS + G RPP P ++ + P GRG++ +R+GP C R R Sbjct: 60 RSARRGTGGGRRPPFPLSSQIRPV-------GRGHRRQRHGPPLCSSRGR 102
>AK108761:Os08g0168000 | Length = 323 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +2 Query: 872 ALFLVSSYVSERYIYYLKAMMRFFHSVSCSNSFLFLFFQKQAMMFG-HNLYTVKSHL 1039 A L+ Y+ + Y+YYLK F ++ + S+ L+F++ G H T++ ++ Sbjct: 186 ATVLLPKYMKDFYLYYLKTFDSFEEALGPNKSYRVLYFKELREQAGDHYASTIQCYM 242 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 51,632,625 Number of extensions: 1179357 Number of successful extensions: 3533 Number of sequences better than 10.0: 6 Number of HSP's gapped: 3526 Number of HSP's successfully gapped: 6 Length of query: 654 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 547 Effective length of database: 11,115,468 Effective search space: 6080160996 Effective search space used: 6080160996 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)