ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf93l13 |
|---|---|
| Clone Library Name | barley_pub |
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 83.6 bits (205), Expect = 1e-15 Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 8/187 (4%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S E G++ +P++ T ++ E+F G + ++++ + RG AFVT S E A Sbjct: 110 SVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAK 169 Query: 419 KSLEL-DGYKIGNRFMRVERCRITASSKRQK-----KTEFQSDPEKPDGCLSAYVGNLSW 580 +++ L DG ++G R ++V + +R+ ++ +Q + P YV NLSW Sbjct: 170 EAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPH---KLYVANLSW 226 Query: 581 NISEKDLRDFFKSS-RIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG-MNQSELRGR 754 ++ + LRD F S + D+ +G SRGF + F E++ A+ MN+ EL GR Sbjct: 227 ALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGR 286 Query: 755 PVKIAYA 775 P+++ A Sbjct: 287 PLRLNVA 293
>P07909:ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 - Drosophila| melanogaster (Fruit fly) Length = 365 Score = 75.5 bits (184), Expect = 3e-13 Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 1/176 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ Y TT+E ++ F+++G I + + + P + RG F+T+ + ++ + Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 91 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 +KI R + KR + P +VG L + E+ +RD+F Sbjct: 92 RPHKIDGRVVE---------PKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYF 142 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 + I I IDK TG RGF V+F+D + ++K V Q +L G+ V + A+ Sbjct: 143 QHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKAL 198
>P21522:ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog -| Schistocerca americana (American grasshopper) Length = 342 Score = 74.7 bits (182), Expect = 5e-13 Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 1/176 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ Y TT+E +++ F+++G I + + + P + RG F+T+ + + Sbjct: 18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNA 77 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 +K+ R + +R +TE PE +VG + + E DLRD+F Sbjct: 78 RPHKVDGRVVEPKRA--------VPRTEI-GRPEAGATVKKLFVGGIKEEMEENDLRDYF 128 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 K + S +DK T RGF V+F+D + ++K ++RG+ + + A+ Sbjct: 129 KQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNHQIRGKHIDVKKAL 184
>P28644:ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast - Spinacia oleracea (Spinach)| Length = 233 Score = 74.3 bits (181), Expect = 7e-13 Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 3/180 (1%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS 424 E K+ +PY E++ +FD G + ++ ++ RG FVT + E A K+ Sbjct: 53 EEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 112 Query: 425 LE-LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDL 601 +E L+GY + R + V + S +R + +F+ YVGNL W++ L Sbjct: 113 VELLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPS-------CRVYVGNLPWDVDTSRL 165 Query: 602 RDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 F + ++ S R D+ TG SRGF V + + A+ ++ L GR V++ A Sbjct: 166 EQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVA 225
>Q5ZI72:HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-like - Gallus gallus| (Chicken) Length = 301 Score = 73.9 bits (180), Expect = 9e-13 Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 1/157 (0%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 GK+ G+ + T+++++ E RFG + + P +G RG FV F+ K LE Sbjct: 30 GKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLE 89 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDF 610 L +K+ + + KR K + + P+K +VG LS + SE+ ++++ Sbjct: 90 LKEHKLDGKLI---------DPKRAKALKGKEPPKK------VFVGGLSPDTSEEQIKEY 134 Query: 611 FKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEK 718 F + I +I +D +T + RGFC + + D+E ++K Sbjct: 135 FGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 171 Score = 46.6 bits (109), Expect = 2e-04 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Frame = +2 Query: 524 SDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFED 700 S ++ DG + ++G LSW+ S+KDL ++ + + D TG SRGF V F+D Sbjct: 23 SKNQQDDGKM--FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 80 Query: 701 DESLEKAVGMNQSELRGR 754 S+EK + + + +L G+ Sbjct: 81 AASVEKVLELKEHKLDGK 98 Score = 45.8 bits (107), Expect = 3e-04 Identities = 23/67 (34%), Positives = 37/67 (55%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 KV G+ T+EE+I+E F FG I +++L + RG F+T+ +E K LE Sbjct: 116 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 175 Query: 434 DGYKIGN 454 ++IG+ Sbjct: 176 RYHQIGS 182
>Q9Z130:HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-like - Mus musculus| (Mouse) Length = 301 Score = 73.6 bits (179), Expect = 1e-12 Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 1/157 (0%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 GK+ G+ + T+++++ E RFG + + P +G RG FV F+ K LE Sbjct: 29 GKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLE 88 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDF 610 L +K+ + + KR K + + P+K +VG LS + SE+ ++++ Sbjct: 89 LKEHKLDGKLI---------DPKRAKALKGKEPPKK------VFVGGLSPDTSEEQIKEY 133 Query: 611 FKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEK 718 F + I +I +D +T + RGFC + + D+E ++K Sbjct: 134 FGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 170 Score = 46.6 bits (109), Expect = 2e-04 Identities = 30/105 (28%), Positives = 50/105 (47%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 KV G+ T+EE+I+E F FG I +++L + RG F+T+ +E K LE Sbjct: 115 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 174 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVG 568 ++IG+ +C I + Q K ++ ++ G A G Sbjct: 175 RYHQIGS-----GKCEIKVA---QPKEVYRQQQQQQKGGRGAAAG 211 Score = 45.4 bits (106), Expect = 4e-04 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Frame = +2 Query: 524 SDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFED 700 S ++ DG + ++G LSW+ S+KDL ++ + + D TG SRGF V F+D Sbjct: 22 SKNQQDDGKM--FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 79 Query: 701 DESLEKAVGMNQSELRGR 754 S++K + + + +L G+ Sbjct: 80 AASVDKVLELKEHKLDGK 97
>O14979:HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-like - Homo sapiens| (Human) Length = 420 Score = 73.6 bits (179), Expect = 1e-12 Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 1/157 (0%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 GK+ G+ + T+++++ E RFG + + P +G RG FV F+ K LE Sbjct: 148 GKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLE 207 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDF 610 L +K+ + + KR K + + P+K +VG LS + SE+ ++++ Sbjct: 208 LKEHKLDGKLI---------DPKRAKALKGKEPPKK------VFVGGLSPDTSEEQIKEY 252 Query: 611 FKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEK 718 F + I +I +D +T + RGFC + + D+E ++K Sbjct: 253 FGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289 Score = 46.6 bits (109), Expect = 2e-04 Identities = 30/105 (28%), Positives = 50/105 (47%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 KV G+ T+EE+I+E F FG I +++L + RG F+T+ +E K LE Sbjct: 234 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 293 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVG 568 ++IG+ +C I + Q K ++ ++ G A G Sbjct: 294 RYHQIGS-----GKCEIKVA---QPKEVYRQQQQQQKGGRGAAAG 330 Score = 45.4 bits (106), Expect = 4e-04 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Frame = +2 Query: 524 SDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFED 700 S ++ DG + ++G LSW+ S+KDL ++ + + D TG SRGF V F+D Sbjct: 141 SKNQQDDGKM--FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198 Query: 701 DESLEKAVGMNQSELRGR 754 S++K + + + +L G+ Sbjct: 199 AASVDKVLELKEHKLDGK 216
>P48809:RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C - Drosophila| melanogaster (Fruit fly) Length = 421 Score = 72.4 bits (176), Expect = 3e-12 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 1/178 (0%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS 424 E GK+ G+ + TT+E + F RFG I + + +SG RG FVTF Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 64 Query: 425 LELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLR 604 L+ + + R + + C K +K G ++G L N++E DLR Sbjct: 65 LQNGPHTLDGRTIDPKPCNPRTLQKPKK-----------GGGYKVFLGGLPSNVTETDLR 113 Query: 605 DFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYA 775 FF + ++ + D+ SRGF + FE++ S+E L G+ V+I A Sbjct: 114 TFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKA 171
>Q8VH51:RBM39_MOUSE RNA-binding protein 39 - Mus musculus (Mouse)| Length = 530 Score = 71.2 bits (173), Expect = 6e-12 Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 3/162 (1%) Frame = +2 Query: 296 EIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIGNRFMRVER 475 ++ E F G +R +++ +S RG+A+V F V + S+ L G R + V Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEF----VDVSSVRLAIGLTGQRVLGVPI 223 Query: 476 CRITASSKRQKKTEFQSDPEKPD-GCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAI 649 + +++ + ++ +K G + YVG+L +NI+E LR F+ RI SI+ + Sbjct: 224 IVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMM 283 Query: 650 DKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAY 772 D TG S+G+ + F D E +KA+ +N EL GRP+K+ + Sbjct: 284 DSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325 Score = 51.6 bits (122), Expect = 5e-06 Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE- 430 ++ + + TE+ +R +F+ FG I S+QL ++G +G F+TF E A K+LE Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310 Query: 431 LDGYKIGNRFMRV 469 L+G+++ R M+V Sbjct: 311 LNGFELAGRPMKV 323 Score = 41.2 bits (95), Expect = 0.007 Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Frame = +2 Query: 530 PEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 PE+ D + + L+ I +DL +FF + ++ +R D+ + SRG +V+F D Sbjct: 147 PEERDA-RTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVS 205 Query: 707 SLEKAVGMNQSELRGRP--VKIAYAIINRA 790 S+ A+G+ + G P V+ + A NRA Sbjct: 206 SVRLAIGLTGQRVLGVPIIVQASQAEKNRA 235
>Q3SWU3:HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-like - Rattus norvegicus| (Rat) Length = 322 Score = 71.2 bits (173), Expect = 6e-12 Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 1/156 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + T+++++ E RFG + + P +G RG FV F+ K LEL Sbjct: 52 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 111 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 +K+ + + KR K + + P+K +VG LS + SE+ ++++F Sbjct: 112 KEHKLDGKLI---------DPKRAKALKGKEPPKK------VFVGGLSPDTSEEQIKEYF 156 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEK 718 + I +I +D +T + RGFC + + D+E ++K Sbjct: 157 GAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 192 Score = 46.6 bits (109), Expect = 2e-04 Identities = 30/105 (28%), Positives = 50/105 (47%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 KV G+ T+EE+I+E F FG I +++L + RG F+T+ +E K LE Sbjct: 137 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 196 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVG 568 ++IG+ +C I + Q K ++ ++ G A G Sbjct: 197 RYHQIGS-----GKCEIKVA---QPKEVYRQQQQQQKGGRGAAAG 233 Score = 45.1 bits (105), Expect = 5e-04 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQ 736 ++G LSW+ S+KDL ++ + + D TG SRGF V F+D S++K + + + Sbjct: 54 FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKE 113 Query: 737 SELRGR 754 +L G+ Sbjct: 114 HKLDGK 119
>Q6URK4:ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 - Rattus norvegicus| (Rat) Length = 379 Score = 70.9 bits (172), Expect = 8e-12 Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 4/179 (2%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT++ +RE F+++G + + R P + RG FVT+ E ++ Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA---YVGNLSWNISEKDLR 604 +K+ R + K+ + D KP L+ +VG + + E +LR Sbjct: 96 RPHKVDGRVV------------EPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLR 143 Query: 605 DFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 D+F K +I +I D+++G RGF V F+D ++++K V + G ++ A+ Sbjct: 144 DYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKAL 202 Score = 40.0 bits (92), Expect = 0.015 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Frame = +2 Query: 497 KRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSR 673 +R+++ E DP++P+ ++G LS+ ++ LR+ F K + D +T SR Sbjct: 17 RRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSR 76 Query: 674 GFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 GF V + E ++ A+ ++ GR V+ A+ Sbjct: 77 GFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
>Q8BG05:ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 - Mus musculus (Mouse)| Length = 379 Score = 70.9 bits (172), Expect = 8e-12 Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 4/179 (2%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT++ +RE F+++G + + R P + RG FVT+ E ++ Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA---YVGNLSWNISEKDLR 604 +K+ R + K+ + D KP L+ +VG + + E +LR Sbjct: 96 RPHKVDGRVV------------EPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLR 143 Query: 605 DFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 D+F K +I +I D+++G RGF V F+D ++++K V + G ++ A+ Sbjct: 144 DYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKAL 202 Score = 40.0 bits (92), Expect = 0.015 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Frame = +2 Query: 497 KRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSR 673 +R+++ E DP++P+ ++G LS+ ++ LR+ F K + D +T SR Sbjct: 17 RRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSR 76 Query: 674 GFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 GF V + E ++ A+ ++ GR V+ A+ Sbjct: 77 GFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
>P51991:ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 - Homo sapiens (Human)| Length = 378 Score = 70.9 bits (172), Expect = 8e-12 Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 4/179 (2%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT++ +RE F+++G + + R P + RG FVT+ E ++ Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA---YVGNLSWNISEKDLR 604 +K+ R + K+ + D KP L+ +VG + + E +LR Sbjct: 96 RPHKVDGRVV------------EPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLR 143 Query: 605 DFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 D+F K +I +I D+++G RGF V F+D ++++K V + G ++ A+ Sbjct: 144 DYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKAL 202 Score = 40.0 bits (92), Expect = 0.015 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Frame = +2 Query: 497 KRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSR 673 +R+++ E DP++P+ ++G LS+ ++ LR+ F K + D +T SR Sbjct: 17 RRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSR 76 Query: 674 GFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 GF V + E ++ A+ ++ GR V+ A+ Sbjct: 77 GFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAV 111
>P19683:ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 315 Score = 70.5 bits (171), Expect = 1e-11 Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 3/180 (1%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS 424 E K+ +PY E + LF++ G + ++ D+ RG FVT + E A K+ Sbjct: 134 EDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKA 193 Query: 425 LEL-DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDL 601 +E+ + Y + R + V + +++R ++ E P + YVGN+ W I + L Sbjct: 194 VEMYNRYDVNGRLLTVNK-----AARRGERPE--RPPRTFEQSYRIYVGNIPWGIDDARL 246 Query: 602 RDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 F + ++ S R D+ TG SRGF V + + A+ ++ L GR +++ A Sbjct: 247 EQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVA 306
>Q08935:ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 273 Score = 70.5 bits (171), Expect = 1e-11 Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 6/180 (3%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSLE 430 K+ +P++ + ELF+R G + +++ +G RG FVT S +EV + Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPE---KPDGCLSAYVGNLSWNISEKDL 601 +GY++ R +RV ++++ + F+ D YVGNL+W + + L Sbjct: 148 FNGYELDGRALRVNS---GPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDAL 204 Query: 602 RDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 F + ++ + D+ +G SRGF V + E + A+ ++ +L GR ++++ A Sbjct: 205 ETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPA 264
>P17130:ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog - Xenopus| laevis (African clawed frog) Length = 365 Score = 70.5 bits (171), Expect = 1e-11 Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 1/158 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT+E +RE F+++G + + R P+S RG FVT+ S + ++ Sbjct: 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTA 74 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 +K+ R KR E S P +VG + + E LR++F Sbjct: 75 RPHKVDGR---------VVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYF 125 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 + +I I D+ +G RGF V FED +S++K V Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIV 163 Score = 43.5 bits (101), Expect = 0.001 Identities = 27/95 (28%), Positives = 47/95 (49%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ T E+ +RE F+++G I +++ SG RG AFVTFE + K + Sbjct: 106 KIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQ 165 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEK 538 + + N +V + A SK++ + S E+ Sbjct: 166 KYHTVNNHNSQVRK----ALSKQEMASVSGSQRER 196
>P04256:ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 - Rattus norvegicus| (Rat) Length = 320 Score = 70.5 bits (171), Expect = 1e-11 Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 4/179 (2%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT+E +R F+++G + + R P++ RG FVT+ + E ++ Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA---YVGNLSWNISEKDLR 604 +K+ R + K+ + D ++P L+ +VG + + E LR Sbjct: 75 RPHKVDGRVV------------EPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122 Query: 605 DFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 D+F+ +I I D+ +G RGF V F+D +S++K V + G ++ A+ Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKAL 181
>P49312:ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 - Mus musculus (Mouse)| Length = 320 Score = 70.5 bits (171), Expect = 1e-11 Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 4/179 (2%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT+E +R F+++G + + R P++ RG FVT+ + E ++ Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA---YVGNLSWNISEKDLR 604 +K+ R + K+ + D ++P L+ +VG + + E LR Sbjct: 75 RPHKVDGRVV------------EPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122 Query: 605 DFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 D+F+ +I I D+ +G RGF V F+D +S++K V + G ++ A+ Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKAL 181
>P09651:ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 - Homo sapiens (Human)| Length = 372 Score = 70.5 bits (171), Expect = 1e-11 Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 4/179 (2%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT+E +R F+++G + + R P++ RG FVT+ + E ++ Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA---YVGNLSWNISEKDLR 604 +K+ R + K+ + D ++P L+ +VG + + E LR Sbjct: 75 RPHKVDGRVV------------EPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122 Query: 605 DFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 D+F+ +I I D+ +G RGF V F+D +S++K V + G ++ A+ Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKAL 181
>P09867:ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 - Bos taurus (Bovine)| Length = 195 Score = 70.5 bits (171), Expect = 1e-11 Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 4/179 (2%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT+E +R F+++G + + R P++ RG FVT+ + E ++ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 73 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA---YVGNLSWNISEKDLR 604 +K+ R + K+ + D ++P L+ +VG + + E LR Sbjct: 74 RPHKVDGRVV------------EPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 121 Query: 605 DFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 D+F+ +I I D+ +G RGF V F+D +S++K V + G ++ A+ Sbjct: 122 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKAL 180
>Q28521:ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 - Macaca mulatta (Rhesus| macaque) Length = 320 Score = 69.7 bits (169), Expect = 2e-11 Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 4/179 (2%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT+E +R F+++G + + R P++ RG FVT+ + E ++ Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNA 74 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA---YVGNLSWNISEKDLR 604 +K+ R + K+ + D ++P L+ +VG + + E LR Sbjct: 75 RPHKVDGRVV------------EPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR 122 Query: 605 DFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 D+F+ +I I D+ +G RGF V F+D S++K V + G ++ A+ Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTVNGHNCEVRKAL 181
>Q5RC80:RBM39_PONPY RNA-binding protein 39 - Pongo pygmaeus (Orangutan)| Length = 524 Score = 69.7 bits (169), Expect = 2e-11 Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 3/162 (1%) Frame = +2 Query: 296 EIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIGNRFMRVER 475 ++ E F G +R +++ +S +G+A+V F V + S+ L G R + V Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEF----VDVSSVPLAIGLTGQRVLGVPI 223 Query: 476 CRITASSKRQKKTEFQSDPEKPD-GCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAI 649 + +++ + ++ +K G + YVG+L +NI+E LR F+ RI SI+ + Sbjct: 224 IVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMM 283 Query: 650 DKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAY 772 D TG S+G+ + F D E +KA+ +N EL GRP+K+ + Sbjct: 284 DSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325 Score = 51.6 bits (122), Expect = 5e-06 Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE- 430 ++ + + TE+ +R +F+ FG I S+QL ++G +G F+TF E A K+LE Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310 Query: 431 LDGYKIGNRFMRV 469 L+G+++ R M+V Sbjct: 311 LNGFELAGRPMKV 323
>Q14498:RBM39_HUMAN RNA-binding protein 39 - Homo sapiens (Human)| Length = 530 Score = 69.7 bits (169), Expect = 2e-11 Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 3/162 (1%) Frame = +2 Query: 296 EIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIGNRFMRVER 475 ++ E F G +R +++ +S +G+A+V F V + S+ L G R + V Sbjct: 168 DLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEF----VDVSSVPLAIGLTGQRVLGVPI 223 Query: 476 CRITASSKRQKKTEFQSDPEKPD-GCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAI 649 + +++ + ++ +K G + YVG+L +NI+E LR F+ RI SI+ + Sbjct: 224 IVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMM 283 Query: 650 DKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAY 772 D TG S+G+ + F D E +KA+ +N EL GRP+K+ + Sbjct: 284 DSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325 Score = 51.6 bits (122), Expect = 5e-06 Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE- 430 ++ + + TE+ +R +F+ FG I S+QL ++G +G F+TF E A K+LE Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 310 Query: 431 LDGYKIGNRFMRV 469 L+G+++ R M+V Sbjct: 311 LNGFELAGRPMKV 323
>Q7ZX83:HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-like-A - Xenopus laevis| (African clawed frog) Length = 293 Score = 69.7 bits (169), Expect = 2e-11 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 8/182 (4%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 GK+ G+ + T+++++ E RFG + + P +G RG FV F+ K LE Sbjct: 26 GKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLE 85 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDF 610 + +K+ + + KR K + + P+K +VG LS +E+ ++ + Sbjct: 86 TNEHKLDGKLI---------DPKRAKALKGKEPPKK------VFVGGLSPETTEEQIKQY 130 Query: 611 FKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEK-------AVGMNQSELRGRPVKI 766 F I +I ID +T + RGFC V + +E ++K +G + E++ K Sbjct: 131 FGGFGEIENIELPIDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKAAQPKE 190 Query: 767 AY 772 Y Sbjct: 191 VY 192 Score = 47.0 bits (110), Expect = 1e-04 Identities = 28/95 (29%), Positives = 47/95 (49%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 KV G+ TTEE+I++ F FG I +++L + RG FVT+ +E K LE Sbjct: 112 KVFVGGLSPETTEEQIKQYFGGFGEIENIELPIDTKTNERRGFCFVTYTGEEPVKKLLES 171 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEK 538 ++IG +C I A+ ++ + Q ++ Sbjct: 172 RFHQIG-----TGKCEIKAAQPKEVYRQQQQKQQR 201
>Q9JII5:DAZP1_MOUSE DAZ-associated protein 1 - Mus musculus (Mouse)| Length = 406 Score = 69.7 bits (169), Expect = 2e-11 Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 11/188 (5%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDE----- 409 E GK+ G+ ++TT+E +R F ++G + + + + RG FV F+ Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67 Query: 410 VALKSLELDGYKIG-----NRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNL 574 +A + LDG I R M+ ER R K + +SD K + +VG + Sbjct: 68 LASRPHTLDGRNIDPKPCTPRGMQPERTR----PKEGWQKGPRSDSSKSN---KIFVGGI 120 Query: 575 SWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRG 751 N E +LR++FK + + D RGF + FED++S+++AV M+ ++ G Sbjct: 121 PHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMG 180 Query: 752 RPVKIAYA 775 + V++ A Sbjct: 181 KKVEVKRA 188 Score = 42.0 bits (97), Expect = 0.004 Identities = 20/79 (25%), Positives = 41/79 (51%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S + K+ G+P+ E E+RE F +FG + + + + RG F+TFE ++ Sbjct: 109 SSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVD 168 Query: 419 KSLELDGYKIGNRFMRVER 475 +++ + + I + + V+R Sbjct: 169 QAVNMHFHDIMGKKVEVKR 187
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 69.7 bits (169), Expect = 2e-11 Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 4/181 (2%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS 424 E GK+ G+ ++TT+E +R F ++G + + + + RG FV F+ Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67 Query: 425 LELDGYKIGNRFMRVERC--RITASSKRQKKTEFQSDPEKPDG-CLSAYVGNLSWNISEK 595 L + + R + + C R + + K +Q P + +VG + N E Sbjct: 68 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGET 127 Query: 596 DLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAY 772 +LR++FK + + D RGF + FED++S+++AV M+ ++ G+ V++ Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187 Query: 773 A 775 A Sbjct: 188 A 188 Score = 41.6 bits (96), Expect = 0.005 Identities = 22/93 (23%), Positives = 45/93 (48%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+P+ E E+RE F +FG + + + + RG F+TFE ++ +++ + Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDP 532 + I + + V+R + R K++ P Sbjct: 174 HFHDIMGKKVEVKR-----AEPRDSKSQAPGQP 201
>P51968:RO31_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 1 - Xenopus| laevis (African clawed frog) Length = 373 Score = 69.3 bits (168), Expect = 2e-11 Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 4/179 (2%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT++ +RE F+++G + + R P + RG FVT+ E S+ Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA---YVGNLSWNISEKDLR 604 +K+ R + K+ + D +P L+ +VG + + E LR Sbjct: 88 RPHKVDGRVV------------EPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLR 135 Query: 605 DFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 D+ +S +I +I D+++G RGF V F+D ++++K V + G ++ A+ Sbjct: 136 DYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKAL 194 Score = 37.4 bits (85), Expect = 0.096 Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 1/85 (1%) Frame = +2 Query: 527 DPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDD 703 DP++P+ ++G LS+ ++ LR+ F+ ++ D +T SRGF V + Sbjct: 19 DPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCV 78 Query: 704 ESLEKAVGMNQSELRGRPVKIAYAI 778 E ++ ++ ++ GR V+ A+ Sbjct: 79 EEVDASMSARPHKVDGRVVEPKRAV 103
>Q6NU14:HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-like-B - Xenopus laevis| (African clawed frog) Length = 291 Score = 68.9 bits (167), Expect = 3e-11 Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 8/181 (4%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + T+++++ E RFG + + P +G RG FV F+ K LE Sbjct: 35 KMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLET 94 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 +K+ + + KR K + + P+K +VG LS +E+ ++ +F Sbjct: 95 KEHKLDGKLI---------DPKRAKALQGKEPPKK------VFVGGLSPETTEEQIKQYF 139 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEK-------AVGMNQSELRGRPVKIA 769 I +I +D +T + RGFC V + D+E ++K +G + E++ K Sbjct: 140 GGFGEIENIELPMDTKTNERRGFCFVTYTDEEPVQKLLESRFHQIGTGKCEIKAAQPKEV 199 Query: 770 Y 772 Y Sbjct: 200 Y 200 Score = 48.9 bits (115), Expect = 3e-05 Identities = 29/95 (30%), Positives = 47/95 (49%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 KV G+ TTEE+I++ F FG I +++L + RG FVT+ +E K LE Sbjct: 120 KVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTDEEPVQKLLES 179 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEK 538 ++IG +C I A+ ++ + Q +K Sbjct: 180 RFHQIG-----TGKCEIKAAQPKEVYRQQQQKQQK 209
>Q08473:SQD_DROME RNA-binding protein squid - Drosophila melanogaster (Fruit fly)| Length = 344 Score = 68.6 bits (166), Expect = 4e-11 Identities = 41/176 (23%), Positives = 82/176 (46%), Gaps = 2/176 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TTE+E+R+ F ++G I S+ + P +G RG AF+ F + E K Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAA 116 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCL-SAYVGNLSWNISEKDLRDF 610 D + I ++ + DP+K +VG L+ IS+++++ + Sbjct: 117 DEHIINSK---------------------KVDPKKAKARHGKIFVGGLTTEISDEEIKTY 155 Query: 611 F-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYA 775 F + I + DK+ +GFC + F+ ++ + + + ++ G+ V + A Sbjct: 156 FGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRA 211 Score = 42.7 bits (99), Expect = 0.002 Identities = 21/75 (28%), Positives = 39/75 (52%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 GK+ G+ ++EEI+ F +FG I +++ +G F+TF+S++V L+ Sbjct: 136 GKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLK 195 Query: 431 LDGYKIGNRFMRVER 475 KI + + V+R Sbjct: 196 TPKQKIAGKEVDVKR 210
>P51992:RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 2 - Xenopus| laevis (African clawed frog) Length = 385 Score = 68.6 bits (166), Expect = 4e-11 Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 4/161 (2%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT++ +RE F+++G + + R P + RG FVT+ E S+ Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA---YVGNLSWNISEKDLR 604 +K+ R + K+ + D +P L+ +VG + + E LR Sbjct: 88 RPHKVDGRVV------------EPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLR 135 Query: 605 DFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 D+F+ +I +I D+++G RGF V F+D ++++K V Sbjct: 136 DYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176
>P41891:GAR2_SCHPO Protein gar2 - Schizosaccharomyces pombe (Fission yeast)| Length = 500 Score = 68.6 bits (166), Expect = 4e-11 Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 6/185 (3%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S E V + + ++ + + F+ +G I ++ SG +G +V FE+ E A Sbjct: 259 SNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAK 318 Query: 419 KSLELDGYK-IGNRFMRVERCRITASSKR----QKKTEFQSDPEKPDGCLSAYVGNLSWN 583 ++ +G K I R + ++ ++ + Q+ F +P + +VGNLS+N Sbjct: 319 AAVAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSD--TVFVGNLSFN 376 Query: 584 ISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPV 760 +E DL F I SIR D ++G +GF +V F D +S +K V MN + GRP Sbjct: 377 ATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVEMNGHFIAGRPC 436 Query: 761 KIAYA 775 ++ ++ Sbjct: 437 RLDFS 441 Score = 48.9 bits (115), Expect = 3e-05 Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 2/101 (1%) Frame = +2 Query: 470 ERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDL-RDFFKSSRIASIRFA 646 E+ R + ++ + + + + +VG LSWN+ ++ L ++F + I R Sbjct: 236 EKKRKAEPASEERPAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVI 295 Query: 647 IDKRTGDSRGFCHVDFEDDESLEKAVGMN-QSELRGRPVKI 766 +D ++G S+G+ +VDFE E+ + AV N E+ GR V + Sbjct: 296 MDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNL 336 Score = 47.0 bits (110), Expect = 1e-04 Identities = 25/82 (30%), Positives = 42/82 (51%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELD 436 V + + TE+++ F G I+S++L P SG +G +VTF + A K +E++ Sbjct: 368 VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVEMN 427 Query: 437 GYKIGNRFMRVERCRITASSKR 502 G+ I R CR+ S+ R Sbjct: 428 GHFIAGR-----PCRLDFSTPR 444
>P19682:ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 276 Score = 67.8 bits (164), Expect = 7e-11 Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 3/177 (1%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS 424 E K+ +PY E + +LF + G + ++ ++ RG FVT + E A K+ Sbjct: 95 EDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKA 154 Query: 425 LEL-DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDL 601 +EL Y + R + V + S + FQ YVGN+ W+I + L Sbjct: 155 VELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQP-------TYRIYVGNIPWDIDDARL 207 Query: 602 RDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKI 766 F + ++ S R D+ +G SRGF V + + +A+ ++ L GR +++ Sbjct: 208 EQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRV 264
>Q5RBU8:ROA2_PONPY Heterogeneous nuclear ribonucleoproteins A2/B1 - Pongo pygmaeus| (Orangutan) Length = 353 Score = 67.8 bits (164), Expect = 7e-11 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 1/176 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TTEE +R ++++G + + R P S RG FVTF S ++ Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + I R KR E P +VG + + E LRD+F Sbjct: 82 RPHSIDGR---------VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF 132 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 + +I +I D+++G RGF V F+D + ++K V + G ++ A+ Sbjct: 133 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKHHTINGHNAEVRKAL 188
>P51989:RO21_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 1 - Xenopus| laevis (African clawed frog) Length = 346 Score = 67.8 bits (164), Expect = 7e-11 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 1/176 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TTEE +R ++++G + + R P S RG FVTF ++ Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + I R KR E + P +VG + + E LR++F Sbjct: 70 RPHTIDGR---------VVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYF 120 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 + +I SI DK++G RGF V F+D + ++K V + G ++ A+ Sbjct: 121 EEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKAL 176
>O88569:ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2/B1 - Mus musculus| (Mouse) Length = 353 Score = 67.4 bits (163), Expect = 9e-11 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 1/176 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TTEE +R ++++G + + R P S RG FVTF S ++ Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + I R KR E P +VG + + E LRD+F Sbjct: 82 RPHSIDGR---------VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF 132 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 + +I +I D+++G RGF V F+D + ++K V + G ++ A+ Sbjct: 133 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKAL 188
>P22626:ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 - Homo sapiens| (Human) Length = 353 Score = 67.4 bits (163), Expect = 9e-11 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 1/176 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TTEE +R ++++G + + R P S RG FVTF S ++ Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + I R KR E P +VG + + E LRD+F Sbjct: 82 RPHSIDGR---------VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF 132 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 + +I +I D+++G RGF V F+D + ++K V + G ++ A+ Sbjct: 133 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKAL 188
>Q2HJ60:ROA2_BOVIN Heterogeneous nuclear ribonucleoproteins A2/B1 - Bos taurus| (Bovine) Length = 341 Score = 67.4 bits (163), Expect = 9e-11 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 1/176 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TTEE +R ++++G + + R P S RG FVTF S ++ Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + I R KR E P +VG + + E LRD+F Sbjct: 70 RPHSIDGR---------VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF 120 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 + +I +I D+++G RGF V F+D + ++K V + G ++ A+ Sbjct: 121 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKAL 176
>P42696:RBM34_HUMAN RNA-binding protein 34 - Homo sapiens (Human)| Length = 430 Score = 67.4 bits (163), Expect = 9e-11 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 20/194 (10%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRF-------------------PDSGNFRG 379 V +P T +++++ F +G I S++ PD N Sbjct: 187 VFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNIN- 245 Query: 380 LAFVTFESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA 559 A+V F+ + A ++L+ +G +I + F R+ + +S R K+ S Sbjct: 246 -AYVVFKEESAATQALKRNGAQIADGF-RIRVDLASETSSRDKR--------------SV 289 Query: 560 YVGNLSWNISEKDL-RDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQ 736 +VGNL + + E + + F I ++R DK TG +GF +V FE+ +S+ A+ +N Sbjct: 290 FVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNN 349 Query: 737 SELRGRPVKIAYAI 778 SEL GR +++ ++ Sbjct: 350 SELMGRKLRVMRSV 363 Score = 31.6 bits (70), Expect = 5.2 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Frame = +2 Query: 437 GYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFK 616 G K+ +R + ++ T S+R KK + + E+ + +VGNL ++K L+ FFK Sbjct: 149 GVKVADRKI-LDDTEDTVVSQR-KKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFK 206 Query: 617 S-SRIASIRF 643 +I S+RF Sbjct: 207 EYGQIESVRF 216
>P48810:RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87F - Drosophila| melanogaster (Fruit fly) Length = 385 Score = 67.4 bits (163), Expect = 9e-11 Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 1/176 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ Y TT++ ++ F+++G I + + + P + RG F+T+ + + Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNA 84 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 +KI R T KR + P +VG L + E+ LR++F Sbjct: 85 RPHKIDGR---------TVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYF 135 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 K +I S+ DK TG RGF ++F+D + ++K + ++ + + + AI Sbjct: 136 KDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAI 191 Score = 37.7 bits (86), Expect = 0.073 Identities = 24/84 (28%), Positives = 39/84 (46%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ EE +RE F FG I S+ + D+G RG AF+ F+ + K + Sbjct: 116 KLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQ 175 Query: 434 DGYKIGNRFMRVERCRITASSKRQ 505 + I N+ + V++ RQ Sbjct: 176 KTHSIKNKTLDVKKAIAKQDMDRQ 199
>Q9TTV2:ROA2_SAGOE Heterogeneous nuclear ribonucleoproteins A2/B1 - Saguinus oedipus| (Cotton-top tamarin) Length = 341 Score = 66.6 bits (161), Expect = 1e-10 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 1/176 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TTEE +R ++++G + + R P S RG FVTF S ++ Sbjct: 10 KLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + I R KR E P +VG + + E LRD+F Sbjct: 70 RPHSIDGR---------VVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF 120 Query: 614 -KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 + +I +I D+++G RGF V F+D + ++K V + G ++ A+ Sbjct: 121 AEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKAL 176
>Q98SJ2:DAZP1_XENLA DAZ-associated protein 1 - Xenopus laevis (African clawed frog)| Length = 360 Score = 66.6 bits (161), Expect = 1e-10 Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 11/188 (5%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDE----- 409 E GK+ G+ ++TT+E +R F ++G + + + + RG FV F+ Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67 Query: 410 VALKSLELDGYKIG-----NRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNL 574 +A + LDG I R M+ ER R ++++ S K +VG + Sbjct: 68 LASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNK------IFVGGI 121 Query: 575 SWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRG 751 N E +L+++F + + + D RGF + FED++S+++AV M+ ++ G Sbjct: 122 PHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMG 181 Query: 752 RPVKIAYA 775 + V++ A Sbjct: 182 KKVEVKRA 189
>O14369:SCE3_SCHPO Probable RNA-binding protein sce3 - Schizosaccharomyces pombe| (Fission yeast) Length = 388 Score = 66.2 bits (160), Expect = 2e-10 Identities = 36/82 (43%), Positives = 53/82 (64%) Frame = +2 Query: 530 PEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDES 709 P +P +A+VGNLS++++E DL DFF + SIR ID T SRGF +V+FE ++ Sbjct: 89 PSEPP--FTAHVGNLSFDLTENDLGDFFGEG-VTSIRLVIDPLTERSRGFGYVEFETADT 145 Query: 710 LEKAVGMNQSELRGRPVKIAYA 775 L A+ ++ +L GRPV+I A Sbjct: 146 LSAALALSGEDLMGRPVRITVA 167
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 66.2 bits (160), Expect = 2e-10 Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 19/193 (9%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSLE 430 K+ +P+ ++ +LF+ G + +++ +G RG FVT S EV + + Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA----------------Y 562 +GY++ R +RV +++ F P G + Y Sbjct: 152 FNGYELDGRPLRVN----AGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVY 207 Query: 563 VGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQ 736 VGNLSW + + L F + ++ R D+ +G S+GF V ++ + ++ A+ ++ Sbjct: 208 VGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDG 267 Query: 737 SELRGRPVKIAYA 775 ++L GR ++++ A Sbjct: 268 ADLDGRQIRVSEA 280
>Q99383:HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 534 Score = 66.2 bits (160), Expect = 2e-10 Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES----D 406 S E K+ G+ + TTE+ +RE F ++G + L++ + P +G RG F++FE D Sbjct: 155 SKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVD 214 Query: 407 EVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNI 586 EV LDG I K D + G +VG + ++ Sbjct: 215 EVVKTQHILDGKVI------------------DPKRAIPRDEQDKTG--KIFVGGIGPDV 254 Query: 587 SEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVK 763 K+ +FF I + +DK TG SRGF V ++ +++++ + + R ++ Sbjct: 255 RPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 314 Query: 764 IAYA 775 I A Sbjct: 315 IKRA 318
>Q640A2:HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-like - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 297 Score = 66.2 bits (160), Expect = 2e-10 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 1/157 (0%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 GK+ G+ + T+++++ E RFG + + P +G RG FV F+ K LE Sbjct: 26 GKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLE 85 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDF 610 +K+ + + KR K + + P+K +VG LS +E+ ++ + Sbjct: 86 TKEHKLDGKLI---------DPKRAKALKGKEPPKK------VFVGGLSPETTEEQIKQY 130 Query: 611 FKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEK 718 F I +I +D +T + RGFC V + +E ++K Sbjct: 131 FGGFGEIENIELPMDTKTNERRGFCFVTYTGEEPVKK 167 Score = 47.4 bits (111), Expect = 9e-05 Identities = 28/95 (29%), Positives = 46/95 (48%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 KV G+ TTEE+I++ F FG I +++L + RG FVT+ +E K LE Sbjct: 112 KVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTGEEPVKKLLES 171 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEK 538 ++IG +C I + ++ + Q +K Sbjct: 172 RFHQIG-----TGKCEIKVAQPKEVYRQQQQKQQK 201 Score = 43.5 bits (101), Expect = 0.001 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQ 736 ++G LSW+ S+KDL ++ + + D TG SRGF V F+D S++K + + Sbjct: 29 FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLETKE 88 Query: 737 SELRGR 754 +L G+ Sbjct: 89 HKLDGK 94
>P49313:ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 279 Score = 65.5 bits (158), Expect = 3e-10 Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 15/189 (7%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSLE 430 K+ + ++ + ELF+R G + +++ +G RG FVT S +EV + Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKP------------DGCLSAYVGNL 574 +GY++ R +RV S +K E S E D YVGNL Sbjct: 148 FNGYELDGRALRVN------SGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNL 201 Query: 575 SWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELR 748 +W + + L F + ++ + D+ +G SRGF V + E + A+ ++ +L Sbjct: 202 AWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLN 261 Query: 749 GRPVKIAYA 775 GR ++++ A Sbjct: 262 GRAIRVSPA 270
>P51990:RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 2 - Xenopus| laevis (African clawed frog) Length = 358 Score = 65.1 bits (157), Expect = 4e-10 Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 1/176 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TTEE +R ++++G + + R P S RG FVTF ++ Sbjct: 10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSA 69 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + I R KR E + P +VG + + E LR++F Sbjct: 70 RPHTIDGR---------VVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYF 120 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 + +I S DK++G RGF V F D + ++K V + G ++ A+ Sbjct: 121 EEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRKAL 176
>Q5M9F1:RBM34_RAT RNA-binding protein 34 - Rattus norvegicus (Rat)| Length = 428 Score = 64.7 bits (156), Expect = 6e-10 Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 19/193 (9%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQL-SRFPDSGNFRGL----------------A 385 V +P T +++++ F +G + S++ S P G A Sbjct: 185 VFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLSKKLAAIKRKFHPDQKSINA 244 Query: 386 FVTFESDEVALKSLELDGYKIGNRF-MRVERCRITASSKRQKKTEFQSDPEKPDGCLSAY 562 +V F+ + A K+L+ +G +I F +RV+ TAS ++ S + Sbjct: 245 YVVFKEERAAAKALQRNGAQIAEGFRIRVDLASETASRDKR----------------SVF 288 Query: 563 VGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQS 739 VGNL + + E L + F I ++R + TG RGF +V FE+ +++ A+ +N S Sbjct: 289 VGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNS 348 Query: 740 ELRGRPVKIAYAI 778 EL GR +++ ++ Sbjct: 349 ELMGRKLRVMRSV 361
>Q920Q6:MSI2H_MOUSE RNA-binding protein Musashi homolog 2 - Mus musculus (Mouse)| Length = 346 Score = 64.3 bits (155), Expect = 7e-10 Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 3/177 (1%) Frame = +2 Query: 242 YECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALK 421 ++ GK+ G+ + T+ + +R+ F +FG IR + R P + RG FVTF K Sbjct: 18 HDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77 Query: 422 SLELDGYKIGNRFMRVERCRITASSKRQKKTEF--QSDPEKPDGCLSAYVGNLSWNISEK 595 L +++ ++ + K F ++ P+ +VG LS N + Sbjct: 78 VLGQPHHELDSKTI-------------DPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVE 124 Query: 596 DLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVK 763 D++ +F+ ++ DK T RGF V FE+++ +EK ++ E+ + V+ Sbjct: 125 DVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 181 Score = 47.8 bits (112), Expect = 7e-05 Identities = 20/76 (26%), Positives = 41/76 (53%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ T E++++ F++FG + L + RG FVTFE+++V K E+ Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEI 170 Query: 434 DGYKIGNRFMRVERCR 481 ++I N+ + ++ + Sbjct: 171 HFHEINNKMVECKKAQ 186
>Q96DH6:MSI2H_HUMAN RNA-binding protein Musashi homolog 2 - Homo sapiens (Human)| Length = 328 Score = 64.3 bits (155), Expect = 7e-10 Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 3/177 (1%) Frame = +2 Query: 242 YECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALK 421 ++ GK+ G+ + T+ + +R+ F +FG IR + R P + RG FVTF K Sbjct: 18 HDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77 Query: 422 SLELDGYKIGNRFMRVERCRITASSKRQKKTEF--QSDPEKPDGCLSAYVGNLSWNISEK 595 L +++ ++ + K F ++ P+ +VG LS N + Sbjct: 78 VLGQPHHELDSKTI-------------DPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVE 124 Query: 596 DLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVK 763 D++ +F+ ++ DK T RGF V FE+++ +EK ++ E+ + V+ Sbjct: 125 DVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 181 Score = 47.8 bits (112), Expect = 7e-05 Identities = 20/76 (26%), Positives = 41/76 (53%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ T E++++ F++FG + L + RG FVTFE+++V K E+ Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEI 170 Query: 434 DGYKIGNRFMRVERCR 481 ++I N+ + ++ + Sbjct: 171 HFHEINNKMVECKKAQ 186
>Q99020:ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B - Mus musculus (Mouse)| Length = 285 Score = 63.9 bits (154), Expect = 1e-09 Identities = 38/178 (21%), Positives = 83/178 (46%), Gaps = 1/178 (0%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS 424 + GK+ G+ + T+++++++ F +FG + + P++G RG F+ F+ K Sbjct: 73 DAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKV 132 Query: 425 LELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLR 604 L+ +++ R + +K + DP K +VG L+ +E+ +R Sbjct: 133 LDQKEHRLDGRVI-----------DPKKAMAMKKDPVK-----KIFVGGLNPEATEEKIR 176 Query: 605 DFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYA 775 ++F + I +I ID + RGF + F++++ ++K + + G +I A Sbjct: 177 EYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVA 234
>Q8C5L7:RBM34_MOUSE RNA-binding protein 34 - Mus musculus (Mouse)| Length = 375 Score = 63.9 bits (154), Expect = 1e-09 Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 19/193 (9%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQL-SRFPDSGNFRGL----------------A 385 V +P T +++++ F +G + S++ S P G A Sbjct: 191 VFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSINA 250 Query: 386 FVTFESDEVALKSLELDGYKIGNRF-MRVERCRITASSKRQKKTEFQSDPEKPDGCLSAY 562 +V F+ + A K+L+ +G +I F +RV+ TAS ++ S + Sbjct: 251 YVVFKDESAAAKALQRNGAQIAEGFRIRVDLASETASRDKR----------------SVF 294 Query: 563 VGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQS 739 VGNL + I + L + F I ++R + TG RGF +V FE+ +++ A+ +N S Sbjct: 295 VGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNS 354 Query: 740 ELRGRPVKIAYAI 778 EL GR +++ ++ Sbjct: 355 ELMGRKLRVMRSV 367
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 63.9 bits (154), Expect = 1e-09 Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 7/180 (3%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 V +P E+E+R+ F +FG I S + R SGN R FV FE E A ++E + Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMR-DQSGNSRCFGFVNFECTEAAASAVEKM 289 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDP----EKPDGCLSAYVGNLSWNISEKDL 601 +G +G+ + V R + + + + + +F+ + EK G + Y+ NL ++ ++ L Sbjct: 290 NGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGA-NLYLKNLDDSVDDEKL 348 Query: 602 RDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG-MNQSELRGRPVKIAYA 775 ++ F + S + ++ + G SRGF V + + E +A+ MN + +P+ IA A Sbjct: 349 KEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALA 407 Score = 34.7 bits (78), Expect = 0.62 Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 2/85 (2%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-G 727 S Y G+L ++E L D FK + + S+R D+ S G+ +++F + +A+ Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNR-RSLGYAYINFSNPNDAYRAMEA 108 Query: 728 MNQSELRGRPVKIAYAIINRA*RLS 802 +N + L RP++I + + + RLS Sbjct: 109 LNYTPLFDRPIRIMLSNRDPSTRLS 133
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 63.2 bits (152), Expect = 2e-09 Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 3/180 (1%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALK 421 E K+ + Y + + LF++ G + ++ ++ RG FVT S DE Sbjct: 148 EEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETA 207 Query: 422 SLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDL 601 + + Y + R + V + S + P + YVGNL W++ L Sbjct: 208 VEKFNRYDLNGRLLTVNKAAPRGSRPERA-------PRVYEPAFRVYVGNLPWDVDNGRL 260 Query: 602 RDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 F + ++ R D+ TG SRGF V D + L +A+ ++ L GR +++ A Sbjct: 261 EQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVA 320
>Q08937:ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 291 Score = 63.2 bits (152), Expect = 2e-09 Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 22/196 (11%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSLE 430 K+ +P++ + LF+R G + +++ +G RG FVT + +EV + Sbjct: 88 KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQ 147 Query: 431 LDGYKIGNRFMRVERCRITASSK-----------------RQKKTEFQS--DPEKPDGCL 553 +GY+I R +RV A + R + F D Sbjct: 148 FNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSN 207 Query: 554 SAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-G 727 YVGNLSW + + L++ F + + + D+ +G SRGF V + + + A+ Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDS 267 Query: 728 MNQSELRGRPVKIAYA 775 +N +L GR ++++ A Sbjct: 268 LNGVDLDGRSIRVSAA 283
>P49314:ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 292 Score = 63.2 bits (152), Expect = 2e-09 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 22/196 (11%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSLE 430 K+ +P++ + LF+R G + +++ SG RG FVT + +EV + Sbjct: 89 KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQ 148 Query: 431 LDGYKIGNRFMRVERCRITASSK-----------------RQKKTEFQS--DPEKPDGCL 553 +GY+I R +RV A + R + F D Sbjct: 149 FNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSN 208 Query: 554 SAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-G 727 YVGNLSW + + L++ F + + + D+ +G SRGF V + + + A+ Sbjct: 209 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDS 268 Query: 728 MNQSELRGRPVKIAYA 775 +N +L GR ++++ A Sbjct: 269 LNGIDLDGRSIRVSAA 284
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 63.2 bits (152), Expect = 2e-09 Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 9/173 (5%) Frame = +2 Query: 284 TTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL------ELDGYK 445 TT+E+ +ELF +FGPI S L + D G +G FV +E E A+K++ EL+G K Sbjct: 230 TTDEQFQELFAKFGPIVSASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEK 288 Query: 446 --IGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKS 619 +G + ER + K+Q + K G ++ +V NL ++ ++ L + F Sbjct: 289 LYVGRAQKKNERMHVL---KKQYEAYRLEKMAKYQG-VNLFVKNLDDSVDDEKLEEEFAP 344 Query: 620 SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 + + G S+GF V F E KA+ NQ + G+P+ +A A Sbjct: 345 YGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 397 Score = 47.8 bits (112), Expect = 7e-05 Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 3/166 (1%) Frame = +2 Query: 281 TTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIGNRF 460 + +E + ++F G + S+++ R + G A+V F E K++E Y Sbjct: 48 SVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTP---- 103 Query: 461 MRVERCRITASSKRQKKTEFQSDPE-KPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIAS 634 ++ CRI S Q DP + G + ++ NL +I K L D F I S Sbjct: 104 IKGRLCRIMWS---------QRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILS 154 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIA 769 + A D+ G S+GF V FE++ + ++A+ +N L G+ + +A Sbjct: 155 SKIATDEN-GKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVA 199 Score = 44.7 bits (104), Expect = 6e-04 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-G 727 S YVG+L ++SE L D F ++SIR D T S G+ +V+F D E+ KA+ Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98 Query: 728 MNQSELRGRPVKIAYA 775 +N + ++GR +I ++ Sbjct: 99 LNYTPIKGRLCRIMWS 114
>P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog)| Length = 651 Score = 63.2 bits (152), Expect = 2e-09 Identities = 47/170 (27%), Positives = 93/170 (54%), Gaps = 2/170 (1%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKI 448 +PY+TT EE++E+F+ + +++ D N +G+A+V F +++ A K+L E G +I Sbjct: 332 IPYSTTVEELQEIFEN---AKDIRIPTGKDGSN-KGIAYVEFSNEDEANKALEEKQGAEI 387 Query: 449 GNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRI 628 R + V+ + ++ + + + PE L V NLS++ +E LR+ F+ + Sbjct: 388 EGRSIFVD-----FTGEKSQNSGNKKGPEGDSKVL--VVNNLSYSATEDSLREVFE--KA 438 Query: 629 ASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 SIR I + G ++GF ++F E + A+ N +E+ GR +++ ++ Sbjct: 439 TSIR--IPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFS 486 Score = 56.6 bits (135), Expect = 2e-07 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 2/175 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 +V + + Y+ TE+ +RE+F++ IR Q + G +G AF+ F S E A +++ Sbjct: 417 LVVNNLSYSATEDSLREVFEKATSIRIPQ-----NQGRAKGFAFIEFSSAEDAKDAMDSC 471 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + +I R +R+E + + QS + +V LS + +E+ L++ F Sbjct: 472 NNTEIEGRSIRLEFSQGGGPQGGGRGGSAQSK--------TLFVRGLSEDTTEETLKEAF 523 Query: 614 KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA-VGMNQSELRGRPVKIAYA 775 S + R D+ TG S+GF VDF E + A M E+ G V + +A Sbjct: 524 DGS--VNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFA 576 Score = 43.1 bits (100), Expect = 0.002 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 11/107 (10%) Frame = +2 Query: 491 SSKRQK---KTEFQSDPEKPDGC---LSAYVGNLSWNISEKD-----LRDFFKSSRIASI 637 S+KR+K KT ++ K D LS ++GNL+ + E D LR+FF + Sbjct: 207 SAKRKKEMPKTIPEAKKTKTDTASEGLSIFIGNLN-STKEFDELKDALREFFSKKNLT-- 263 Query: 638 RFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 D R G+S+ F +VDF +E +EKA+ + ++ G VKI A+ Sbjct: 264 --IQDIRIGNSKKFGYVDFSSEEEVEKALKLTGKKILGTEVKIEKAM 308
>O43347:MSI1H_HUMAN RNA-binding protein Musashi homolog 1 - Homo sapiens (Human)| Length = 362 Score = 62.4 bits (150), Expect = 3e-09 Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 3/173 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT+E +RE F +FG ++ + R P + RG FVTF K L Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEF--QSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 +++ ++ + K F ++ P+ +VG LS N + +D++ Sbjct: 81 SRHELDSKTI-------------DPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQ 127 Query: 608 FFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVK 763 +F+ ++ DK T RGF V FE ++ +EK ++ E+ + V+ Sbjct: 128 YFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE 180 Score = 50.1 bits (118), Expect = 1e-05 Identities = 21/76 (27%), Positives = 42/76 (55%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ TT E++++ F++FG + L + RG FVTFES+++ K E+ Sbjct: 110 KIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 169 Query: 434 DGYKIGNRFMRVERCR 481 ++I N+ + ++ + Sbjct: 170 HFHEINNKMVECKKAQ 185 Score = 43.9 bits (102), Expect = 0.001 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%) Frame = +2 Query: 524 SDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFED 700 + P+ P ++G LSW +++ LR++F + + D T SRGF V F D Sbjct: 11 ASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD 70 Query: 701 DESLEKAVGMNQSELRGRPVKIAYAIINRA 790 ++K + ++ EL + + A RA Sbjct: 71 QAGVDKVLAQSRHELDSKTIDPKVAFPRRA 100
>Q02926:RB97D_DROME Ribonucleoprotein RB97D - Drosophila melanogaster (Fruit fly)| Length = 471 Score = 62.0 bits (149), Expect = 4e-09 Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 1/178 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ TTEE ++ + ++G + + + R + RG F+T+ + ++ E Sbjct: 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQEN 92 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + I + T +KR + E +VG L N E+ LR++F Sbjct: 93 RPHIIDGK---------TVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYF 143 Query: 614 -KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAIIN 784 + + S++ DK TG RGF V+F+D ++++KA+ Q ++ V + +I N Sbjct: 144 LQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYN 201
>Q8K3P4:MSI1H_RAT RNA-binding protein Musashi homolog 1 - Rattus norvegicus (Rat)| Length = 362 Score = 62.0 bits (149), Expect = 4e-09 Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 3/173 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT+E +RE F +FG ++ + R P + RG FVTF K L Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEF--QSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 +++ ++ + K F ++ P+ +VG LS N + +D++ Sbjct: 81 SRHELDSKTI-------------DPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKH 127 Query: 608 FFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVK 763 +F+ ++ DK T RGF V FE ++ +EK ++ E+ + V+ Sbjct: 128 YFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE 180 Score = 49.3 bits (116), Expect = 2e-05 Identities = 21/76 (27%), Positives = 41/76 (53%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ TT E+++ F++FG + L + RG FVTFES+++ K E+ Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 169 Query: 434 DGYKIGNRFMRVERCR 481 ++I N+ + ++ + Sbjct: 170 HFHEINNKMVECKKAQ 185 Score = 43.9 bits (102), Expect = 0.001 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%) Frame = +2 Query: 524 SDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFED 700 + P+ P ++G LSW +++ LR++F + + D T SRGF V F D Sbjct: 11 ASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD 70 Query: 701 DESLEKAVGMNQSELRGRPVKIAYAIINRA 790 ++K + ++ EL + + A RA Sbjct: 71 QAGVDKVLAQSRHELDSKTIDPKVAFPRRA 100
>Q61474:MSI1H_MOUSE RNA-binding protein Musashi homolog 1 - Mus musculus (Mouse)| Length = 362 Score = 62.0 bits (149), Expect = 4e-09 Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 3/173 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ + TT+E +RE F +FG ++ + R P + RG FVTF K L Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEF--QSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 +++ ++ + K F ++ P+ +VG LS N + +D++ Sbjct: 81 SRHELDSKTI-------------DPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKH 127 Query: 608 FFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVK 763 +F+ ++ DK T RGF V FE ++ +EK ++ E+ + V+ Sbjct: 128 YFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE 180 Score = 49.3 bits (116), Expect = 2e-05 Identities = 21/76 (27%), Positives = 41/76 (53%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ TT E+++ F++FG + L + RG FVTFES+++ K E+ Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 169 Query: 434 DGYKIGNRFMRVERCR 481 ++I N+ + ++ + Sbjct: 170 HFHEINNKMVECKKAQ 185 Score = 43.9 bits (102), Expect = 0.001 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%) Frame = +2 Query: 524 SDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFED 700 + P+ P ++G LSW +++ LR++F + + D T SRGF V F D Sbjct: 11 ASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD 70 Query: 701 DESLEKAVGMNQSELRGRPVKIAYAIINRA 790 ++K + ++ EL + + A RA Sbjct: 71 QAGVDKVLAQSRHELDSKTIDPKVAFPRRA 100
>Q12849:GRSF1_HUMAN G-rich sequence factor 1 - Homo sapiens (Human)| Length = 447 Score = 60.8 bits (146), Expect = 8e-09 Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 6/174 (3%) Frame = +2 Query: 263 ASGMPYTTTEEEIRELFDRFGPIRSLQ------LSRFPDSGNFRGLAFVTFESDEVALKS 424 A G+P++ T E++ F IR+ + L+R G RG A + ES++ K+ Sbjct: 121 AQGLPWSCTMEDVLNFFSDCR-IRNGENGIHFLLNR---DGKRRGDALIEMESEQDVQKA 176 Query: 425 LELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLR 604 LE +G R++ V K + +S P DG + + L ++ +EKD+ Sbjct: 177 LEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVR--LRGLPYSCNEKDIV 234 Query: 605 DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 DFF I I F +D R G +V FE+ E +A+ ++ E+ R ++I Sbjct: 235 DFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEI 288 Score = 32.0 bits (71), Expect = 4.0 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 4/88 (4%) Frame = +2 Query: 533 EKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIAS----IRFAIDKRTGDSRGFCHVDFED 700 E+ D L W+ + +D+ +FF RI + I F ++ R G RG ++ E Sbjct: 111 EEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLN-RDGKRRGDALIEMES 169 Query: 701 DESLEKAVGMNQSELRGRPVKIAYAIIN 784 ++ ++KA+ ++ + R V++ Y I N Sbjct: 170 EQDVQKALEKHRMYMGQRYVEV-YEINN 196
>Q5REG1:SART3_PONPY Squamous cell carcinoma antigen recognized by T-cells 3 - Pongo| pygmaeus (Orangutan) Length = 981 Score = 60.5 bits (145), Expect = 1e-08 Identities = 41/174 (23%), Positives = 86/174 (49%), Gaps = 3/174 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEE--IRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 V S +PY+ E + +R LF+ G + ++ F + G+FRG +V F+ ++ AL++LE Sbjct: 724 VFVSNLPYSMQEPDAKLRPLFEACGEVVQIR-PIFSNRGDFRGYRYVEFKEEKSALQALE 782 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDF 610 +D + R M V C + + K + + EK ++ L ++ ++++L + Sbjct: 783 MDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSLEKH----KLFISGLPFSCTKEELEEI 838 Query: 611 FKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIA 769 K+ + R G +G +V++E++ +AV M+ ++ +K+A Sbjct: 839 CKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKENVIKVA 892 Score = 45.1 bits (105), Expect = 5e-04 Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S E K+ SG+P++ T+EE+ E+ G ++ L+L +G +GLA+V +E++ A Sbjct: 815 SLEKHKLFISGLPFSCTKEELEEICKAHGTVKDLRLVT-NRAGKPKGLAYVEYENESQAS 873 Query: 419 KS-LELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPD 544 ++ +++DG I ++V S+ Q+K PEKP+ Sbjct: 874 QAVMKMDGMTIKENVIKV-----AISNPPQRKV-----PEKPE 906
>Q15020:SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 - Homo| sapiens (Human) Length = 963 Score = 60.5 bits (145), Expect = 1e-08 Identities = 41/174 (23%), Positives = 86/174 (49%), Gaps = 3/174 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEE--IRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 V S +PY+ E + +R LF+ G + ++ F + G+FRG +V F+ ++ AL++LE Sbjct: 706 VFVSNLPYSMQEPDTKLRPLFEACGEVVQIR-PIFSNRGDFRGYCYVEFKEEKSALQALE 764 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDF 610 +D + R M V C + + K + + EK ++ L ++ ++++L + Sbjct: 765 MDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSLEKH----KLFISGLPFSCTKEELEEI 820 Query: 611 FKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIA 769 K+ + R G +G +V++E++ +AV M+ ++ +K+A Sbjct: 821 CKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKENIIKVA 874 Score = 47.0 bits (110), Expect = 1e-04 Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 8/101 (7%) Frame = +2 Query: 491 SSKRQKKTEFQSDPEK-----PDGCLSAYVGNLSWNISEKD--LRDFFKS-SRIASIRFA 646 S +++K + D K ++ +V NL +++ E D LR F++ + IR Sbjct: 679 SKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDTKLRPLFEACGEVVQIRPI 738 Query: 647 IDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIA 769 R GD RG+C+V+F++++S +A+ M++ + GRP+ ++ Sbjct: 739 FSNR-GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 778 Score = 45.4 bits (106), Expect = 4e-04 Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S E K+ SG+P++ T+EE+ E+ G ++ L+L +G +GLA+V +E++ A Sbjct: 797 SLEKHKLFISGLPFSCTKEELEEICKAHGTVKDLRLVT-NRAGKPKGLAYVEYENESQAS 855 Query: 419 KS-LELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPD 544 ++ +++DG I ++V S+ Q+K PEKP+ Sbjct: 856 QAVMKMDGMTIKENIIKV-----AISNPPQRKV-----PEKPE 888
>Q8T6B9:PUF68_DROME Poly U-binding-splicing factor half pint - Drosophila melanogaster| (Fruit fly) Length = 637 Score = 60.5 bits (145), Expect = 1e-08 Identities = 44/178 (24%), Positives = 91/178 (51%), Gaps = 3/178 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE- 430 +V + + E+ IR F FGPI+S+ +S P + +G AFV +E E A +LE Sbjct: 131 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 190 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDF 610 ++G +G R ++V R S+ Q + E+ YV ++ ++SE+D++ Sbjct: 191 MNGALMGGRNIKVGR----PSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEEDIKSV 246 Query: 611 FKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYAI 778 F++ I + A +G+ +++ + +++++A+ MN +L G+ +++ +I Sbjct: 247 FEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLGGQLLRVGRSI 304
>Q8C5Q4:GRSF1_MOUSE G-rich sequence factor 1 - Mus musculus (Mouse)| Length = 479 Score = 60.5 bits (145), Expect = 1e-08 Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 2/170 (1%) Frame = +2 Query: 263 ASGMPYTTTEEEIRELFDRFGPIRSLQLSRF--PDSGNFRGLAFVTFESDEVALKSLELD 436 A G+P++ T E++ F S F G RG A + ES++ K+LE Sbjct: 153 AQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKH 212 Query: 437 GYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFK 616 +G R++ V K + + P DG + + L ++ +EKD+ DFF Sbjct: 213 RMYMGQRYVEVYEINNEDVDALMKSLQVKPSPVLSDGVVR--LRGLPYSCNEKDIVDFFA 270 Query: 617 SSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 I I F +D R G +V FE+ E +A+ ++ E+ R ++I Sbjct: 271 GLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEI 320
>Q9JLI8:SART3_MOUSE Squamous cell carcinoma antigen recognized by T-cells 3 - Mus| musculus (Mouse) Length = 962 Score = 60.1 bits (144), Expect = 1e-08 Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 3/174 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEI--RELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 V S +PY+ E E+ R LF+ G + ++ F + G+FRG +V F ++ A ++LE Sbjct: 706 VFVSNLPYSIEEPEVKLRPLFEVCGEVVQIR-PIFSNRGDFRGYCYVEFGEEKSAQQALE 764 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDF 610 LD + R M V C + + K + + EK ++ L ++ ++++L D Sbjct: 765 LDRKIVEGRPMFVSPCVDKSKNPDFKVFRYSTTLEKH----KLFISGLPFSCTKEELEDI 820 Query: 611 FKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIA 769 K+ + R G +G +V++E++ +AV M+ +R +K+A Sbjct: 821 CKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIRENVIKVA 874 Score = 44.7 bits (104), Expect = 6e-04 Identities = 36/134 (26%), Positives = 70/134 (52%), Gaps = 3/134 (2%) Frame = +2 Query: 377 GLAFVTFESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLS 556 G A E E++ K L +D +G + E+ A+S ++ + D K ++ Sbjct: 655 GEASAMKEETELSGKCLTID---VGPPSKQKEK----AASLKRDMPKVAHDSSKDS--VT 705 Query: 557 AYVGNLSWNISEKD--LRDFFK-SSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG 727 +V NL ++I E + LR F+ + IR R GD RG+C+V+F +++S ++A+ Sbjct: 706 VFVSNLPYSIEEPEVKLRPLFEVCGEVVQIRPIFSNR-GDFRGYCYVEFGEEKSAQQALE 764 Query: 728 MNQSELRGRPVKIA 769 +++ + GRP+ ++ Sbjct: 765 LDRKIVEGRPMFVS 778 Score = 42.7 bits (99), Expect = 0.002 Identities = 28/98 (28%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS-LE 430 K+ SG+P++ T+EE+ ++ G ++ L+L +G +GLA+V +E++ A ++ ++ Sbjct: 802 KLFISGLPFSCTKEELEDICKAHGTVKDLRLVT-NRAGKPKGLAYVEYENESQASQAVMK 860 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPD 544 +DG I R ++ S+ Q+K PEKP+ Sbjct: 861 MDGMTI-----RENVIKVAISNPPQRKV-----PEKPE 888
>P27476:NSR1_YEAST Nuclear localization sequence-binding protein - Saccharomyces| cerevisiae (Baker's yeast) Length = 414 Score = 59.7 bits (143), Expect = 2e-08 Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 3/180 (1%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS 424 E + + ++ +E +++ F+ G + ++ + RG +V FE+ A K+ Sbjct: 166 EPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKA 225 Query: 425 L-ELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDL 601 + E+ G +I R + + + + +F P +P L ++GNLS+N + Sbjct: 226 IQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTL--FLGNLSFNADRDAI 283 Query: 602 RDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSE-LRGRPVKIAYA 775 + F K + S+R T +GF +V F + E +KA+ Q E + RPV++ ++ Sbjct: 284 FELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFS 343 Score = 48.1 bits (113), Expect = 5e-05 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 2/92 (2%) Frame = +2 Query: 491 SSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDL-RDFFKSSRIASIRFAIDKRTGD 667 SS +++K E +P + +VG LSW+I ++ L ++F + R ++ T Sbjct: 154 SSNKKQKNEETEEPA------TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDR 207 Query: 668 SRGFCHVDFEDDESLEKAV-GMNQSELRGRPV 760 SRG+ +VDFE+ EKA+ M E+ GRP+ Sbjct: 208 SRGYGYVDFENKSYAEKAIQEMQGKEIDGRPI 239
>Q9NW13:RBM28_HUMAN RNA-binding protein 28 - Homo sapiens (Human)| Length = 759 Score = 59.3 bits (142), Expect = 2e-08 Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 14/183 (7%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTF---ESDEVALKSL-ELDG 439 +P + E++ ELF + GP++ + S RG +VTF E + ALK + +G Sbjct: 11 LPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEITTFEG 70 Query: 440 YKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVG---------NLSWNISE 592 KI + V + ++ +K + K E P+K A V NLS+ SE Sbjct: 71 CKIN---VTVAKKKLRNKTKEKGKNENSECPKKEPKAKKAKVADKKARLIIRNLSFKCSE 127 Query: 593 KDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIA 769 DL+ F K G RGF V F++ KA+ GMN E++GR V + Sbjct: 128 DDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVD 187 Query: 770 YAI 778 +A+ Sbjct: 188 WAV 190 Score = 43.1 bits (100), Expect = 0.002 Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 7/110 (6%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL--- 427 V + + + EEE+ EL +FG ++ +++ PD+ + +G AF F + E A K L Sbjct: 337 VFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAA 396 Query: 428 ----ELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYV 565 E G K+ R ++V+ + + + T+ +KP G + Y+ Sbjct: 397 SPENEAGGLKLDGRQLKVDLAVTRDEAAKLQTTKV----KKPTGTRNLYL 442 Score = 34.7 bits (78), Expect = 0.62 Identities = 16/59 (27%), Positives = 35/59 (59%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 +++ + + +E++++ +F +FG + + + R PD G RG FV F++ A K+L+ Sbjct: 115 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPD-GKMRGFGFVQFKNLLEAGKALK 172
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 59.3 bits (142), Expect = 2e-08 Identities = 49/169 (28%), Positives = 90/169 (53%), Gaps = 6/169 (3%) Frame = +2 Query: 287 TEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYKIGNRFM 463 +E+ +RE F FG I SL +++ ++ RG AFV F++ E A ++ E ++G K G++ + Sbjct: 213 SEDLLREKFAEFGKIVSLAIAK-DENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCL 271 Query: 464 RVERCRITASSKRQKKTEFQSDPEKPD---GCLSAYVGNLSWNISEKDLRDFF-KSSRIA 631 V R + A ++ + +F+ E+ + YV N++ ++E++LR F + I Sbjct: 272 YVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTIT 331 Query: 632 SIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSEL-RGRPVKIAYA 775 S + D++ G S+GF V F E AV ++ G+P+ +A A Sbjct: 332 STKLMCDEK-GKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIA 379 Score = 32.0 bits (71), Expect = 4.0 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 1/94 (1%) Frame = +2 Query: 287 TEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYKIGNRFM 463 TEEE+R+ F + G I S +L + G +G FV F + E A+ +++ G + + Sbjct: 316 TEEELRKHFSQCGTITSTKL-MCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPL 374 Query: 464 RVERCRITASSKRQKKTEFQSDPEKPDGCLSAYV 565 V + K Q + +F + E SA V Sbjct: 375 YVAIAQKKEDRKMQLQVQFGNRVEARKSSSSASV 408
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 59.3 bits (142), Expect = 2e-08 Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 5/162 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS-LELDGYKIGNRFMR 466 +E+++ELF +GP S+++ R SG +G FV +E+ E A K+ L+L G I + + Sbjct: 212 DEKLKELFCEYGPTESVKVIR-DASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLY 270 Query: 467 VERCRITASSKRQKKTEFQ----SDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIAS 634 V R + + + F+ + +P G + Y+ NL I+++ L++ F S S Sbjct: 271 VGRAQKKIERLAELRRRFERLRLKEKSRPPG-VPIYIKNLDETINDEKLKEEFSSFGSIS 329 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPV 760 R + G +GF V F E KAV E+ GR V Sbjct: 330 -RAKVMMEVGQGKGFGVVCFSSFEEATKAV----DEMNGRVV 366
>Q86U06:RBM23_HUMAN Probable RNA-binding protein 23 - Homo sapiens (Human)| Length = 439 Score = 58.9 bits (141), Expect = 3e-08 Identities = 42/162 (25%), Positives = 83/162 (51%), Gaps = 3/162 (1%) Frame = +2 Query: 296 EIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIGNRFMRVER 475 ++ + F G +R +++ +S +G+A+V F ++S+ L G R + V Sbjct: 181 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF----CEIQSVPLAIGLTGQRLLGVPI 236 Query: 476 CRITASSKRQKKTEFQSDPEKPDGC-LSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAI 649 + +++ + ++ +K +G + YVG+L +NI+E LR F+ +I +I Sbjct: 237 IVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMK 296 Query: 650 DKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAY 772 D TG S+G+ + F D E +A+ +N EL GRP+++ + Sbjct: 297 DSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGH 338 Score = 50.1 bits (118), Expect = 1e-05 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE- 430 ++ + + TE+ +R +F+ FG I ++ L + D+G +G F+TF E A ++LE Sbjct: 264 RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQ 323 Query: 431 LDGYKIGNRFMRV 469 L+G+++ R MRV Sbjct: 324 LNGFELAGRPMRV 336 Score = 40.4 bits (93), Expect = 0.011 Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = +2 Query: 530 PEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 PE+ D + + L+ I +DL DFF + ++ +R D+ + S+G +V+F + + Sbjct: 160 PEERDA-RTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQ 218 Query: 707 SLEKAVGMNQSELRGRPV 760 S+ A+G+ L G P+ Sbjct: 219 SVPLAIGLTGQRLLGVPI 236
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 58.9 bits (141), Expect = 3e-08 Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 5/162 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS-LELDGYKIGNRFMR 466 +E+++ELF +GP S+++ R SG +G FV +E+ E A K+ L+L G I + + Sbjct: 212 DEKLKELFCEYGPTESVKVIR-DASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLY 270 Query: 467 VERCRITASSKRQKKTEFQ----SDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIAS 634 V R + + + F+ + +P G + Y+ NL I+++ L++ F S S Sbjct: 271 VGRAQKKIERLAELRRRFERLRLKEKSRPPG-VPIYIKNLDETINDEKLKEEFSSFGSIS 329 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPV 760 R + G +GF V F E KAV E+ GR V Sbjct: 330 -RAKVMMEVGQGKGFGVVCFSSFEEATKAV----DEMNGRIV 366
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 58.9 bits (141), Expect = 3e-08 Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 5/162 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS-LELDGYKIGNRFMR 466 +E+++ELF +GP S+++ R SG +G FV +E+ E A K+ L+L G I + + Sbjct: 212 DEKLKELFCEYGPTESVKVIR-DASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLY 270 Query: 467 VERCRITASSKRQKKTEFQ----SDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIAS 634 V R + + + F+ + +P G + Y+ NL I+++ L++ F S S Sbjct: 271 VGRAQKKIERLAELRRRFERLRLKEKSRPPG-VPIYIKNLDETINDEKLKEEFSSFGSIS 329 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPV 760 R + G +GF V F E KAV E+ GR V Sbjct: 330 -RAKVMMEVGQGKGFGVVCFSSFEEATKAV----DEMNGRIV 366
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 58.9 bits (141), Expect = 3e-08 Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 5/162 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS-LELDGYKIGNRFMR 466 +E+++ELF +GP S+++ R SG +G FV +E+ E A K+ L+L G I + + Sbjct: 212 DEKLKELFCEYGPTESVKVIR-DASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLY 270 Query: 467 VERCRITASSKRQKKTEFQ----SDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIAS 634 V R + + + F+ + +P G + Y+ NL I+++ L++ F S S Sbjct: 271 VGRAQKKIERLAELRRRFERLRLKEKSRPPG-VPIYIKNLDETINDEKLKEEFSSFGSIS 329 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPV 760 R + G +GF V F E KAV E+ GR V Sbjct: 330 -RAKVMMEVGQGKGFGVVCFSSFEEATKAV----DEMNGRIV 366
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 58.9 bits (141), Expect = 3e-08 Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 5/162 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS-LELDGYKIGNRFMR 466 +E+++ELF +GP S+++ R SG +G FV +E+ E A K+ L+L G I + + Sbjct: 212 DEKLKELFCEYGPTESVKVIR-DASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLY 270 Query: 467 VERCRITASSKRQKKTEFQ----SDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIAS 634 V R + + + F+ + +P G + Y+ NL I+++ L++ F S S Sbjct: 271 VGRAQKKIERLAELRRRFERLRLKEKSRPPG-VPIYIKNLDETINDEKLKEEFSSFGSIS 329 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPV 760 R + G +GF V F E KAV E+ GR V Sbjct: 330 -RAKVMMEVGQGKGFGVVCFSSFEEATKAV----DEMNGRIV 366
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 58.9 bits (141), Expect = 3e-08 Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 5/162 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS-LELDGYKIGNRFMR 466 +E+++ELF +GP S+++ R SG +G FV +E+ E A K+ L+L G I + + Sbjct: 212 DEKLKELFCEYGPTESVKVIR-DASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLY 270 Query: 467 VERCRITASSKRQKKTEFQ----SDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIAS 634 V R + + + F+ + +P G + Y+ NL I+++ L++ F S S Sbjct: 271 VGRAQKKIERLAELRRRFERLRLKEKSRPPG-VPIYIKNLDETINDEKLKEEFSSFGSIS 329 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPV 760 R + G +GF V F E KAV E+ GR V Sbjct: 330 -RAKVMMEVGQGKGFGVVCFSSFEEATKAV----DEMNGRIV 366
>P08199:NUCL_MESAU Nucleolin - Mesocricetus auratus (Golden hamster)| Length = 714 Score = 58.9 bits (141), Expect = 3e-08 Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 2/181 (1%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S E +V S + Y+ TEE ++E+F++ I+ Q + G +G AF+ F S E A Sbjct: 482 SGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQQ----GKSKGYAFIEFASFEDAK 537 Query: 419 KSLE-LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEK 595 ++L + +I R +R+E S + S P K + +V LS + +E+ Sbjct: 538 EALNSCNKMEIEGRTIRLELQGPRGSPNAR------SQPSK-----TLFVKGLSEDTTEE 586 Query: 596 DLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA-VGMNQSELRGRPVKIAY 772 L++ F+ S A R D+ TG S+GF VDF +E + A M E+ G V + + Sbjct: 587 TLKESFEGSVRA--RIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDW 644 Query: 773 A 775 A Sbjct: 645 A 645 Score = 55.8 bits (133), Expect = 3e-07 Identities = 41/182 (22%), Positives = 88/182 (48%), Gaps = 12/182 (6%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL--- 427 ++A + + TE+E++E+F+ +L++ G +G+A++ F+S+ A K+L Sbjct: 396 LLAKNLSFNITEDELKEVFE-----DALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEK 450 Query: 428 ---ELDG-----YKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWN 583 E+DG Y G + R ER ++ + KT + NLS++ Sbjct: 451 QGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKT--------------LVLSNLSYS 496 Query: 584 ISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPV 760 +E+ L++ F+ + + + G S+G+ ++F E ++A+ N+ E+ GR + Sbjct: 497 ATEETLQEVFEKATFIKVP---QNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTI 553 Query: 761 KI 766 ++ Sbjct: 554 RL 555 Score = 51.6 bits (122), Expect = 5e-06 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 1/138 (0%) Frame = +2 Query: 362 SGNFRGLAFVTFESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKP 541 +G R +V FES E K+LEL G K+ +++E+ + D +K Sbjct: 344 TGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPK-------------GRDSKKV 390 Query: 542 DGCLSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA 721 + NLS+NI+E +L++ F+ ++ + + G S+G +++F+ + EK Sbjct: 391 RAARTLLAKNLSFNITEDELKEVFED----ALEIRLVSQDGKSKGIAYIEFKSEADAEKN 446 Query: 722 VGMNQ-SELRGRPVKIAY 772 + Q +E+ GR V + Y Sbjct: 447 LEEKQGAEIDGRSVSLYY 464 Score = 43.1 bits (100), Expect = 0.002 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 10/103 (9%) Frame = +2 Query: 488 ASSKRQKKTEFQSD-----PEKPDGCLSA-----YVGNLSWNISEKDLRDFFKSSRIASI 637 A KR+K+ Q + +K +G S ++GNL+ N S +L+ + Sbjct: 277 APGKRKKEMTKQKEVPEAKKQKVEGSESTTPFNLFIGNLNPNKSVAELKVAISEPFAKND 336 Query: 638 RFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 +D RTG +R F +VDFE E LEKA+ + ++ G +K+ Sbjct: 337 LAVVDVRTGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKL 379
>P70372:ELAV1_MOUSE ELAV-like protein 1 - Mus musculus (Mouse)| Length = 326 Score = 58.5 bits (140), Expect = 4e-08 Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 2/158 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 ++ + +P T+EE+R LF G + S +L R +G+ G FV + + + A +++ L Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 +G ++ ++ ++V R ++ + + Y+ L +++KD+ D F Sbjct: 82 NGLRLQSKTIKVSYARPSSEVIKD---------------ANLYISGLPRTMTQKDVEDMF 126 Query: 614 -KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 + RI + R +D+ TG SRG + F+ E+A+ Sbjct: 127 SRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAI 164
>Q99729:ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B - Homo sapiens (Human)| Length = 331 Score = 58.2 bits (139), Expect = 5e-08 Identities = 38/179 (21%), Positives = 84/179 (46%), Gaps = 2/179 (1%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS 424 + GK+ G+ + T+++++++ F +FG + + P++G RG F+ F+ K Sbjct: 66 DAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 125 Query: 425 LELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLS-WNISEKDL 601 L+ +++ R + +K + DP K +VG L+ + +E+ + Sbjct: 126 LDQKEHRLDGRVI-----------DPKKAMAMKKDPVK-----KIFVGGLNPESPTEEKI 169 Query: 602 RDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYA 775 R++F + I +I +D + RGF + F+++E ++K + + G +I A Sbjct: 170 REYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVA 228
>P32588:PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 453 Score = 58.2 bits (139), Expect = 5e-08 Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 3/166 (1%) Frame = +2 Query: 287 TEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYKIGNRFM 463 TE+ +++ F GPI ++++ ++ N AFV + A +L+ L+G +I N + Sbjct: 87 TEDILKQYFQVGGPIANIKIMIDKNNKNVN-YAFVEYHQSHDANIALQTLNGKQIENNIV 145 Query: 464 RVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIR 640 ++ FQS D + +VG+L+ N+ ++ LR+ FK S Sbjct: 146 KINWA-------------FQSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGH 192 Query: 641 FAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 D +TG SRG+ V F + + A+ M +L GRP++I +A Sbjct: 193 VMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWA 238
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 58.2 bits (139), Expect = 5e-08 Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 6/168 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFMR 466 +E ++ELF +FGP S+++ +SG +G FV+FE E A K++ E++G ++ + + Sbjct: 204 DERLKELFGKFGPALSVKVMT-DESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262 Query: 467 VERCRITASSKRQKKTEFQ---SDPEKPDGCLSAYVGNLSWNISEKDLR-DFFKSSRIAS 634 V R + + + K +F+ D ++ YV NL I ++ LR +F I S Sbjct: 263 VGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITS 322 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 + ++ G S+GF V F E KAV MN + +P+ +A A Sbjct: 323 AKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 58.2 bits (139), Expect = 5e-08 Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 6/168 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFMR 466 +E ++ELF +FGP S+++ +SG +G FV+FE E A K++ E++G ++ + + Sbjct: 204 DERLKELFGKFGPALSVKVMT-DESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262 Query: 467 VERCRITASSKRQKKTEFQ---SDPEKPDGCLSAYVGNLSWNISEKDLR-DFFKSSRIAS 634 V R + + + K +F+ D ++ YV NL I ++ LR +F I S Sbjct: 263 VGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITS 322 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 + ++ G S+GF V F E KAV MN + +P+ +A A Sbjct: 323 AKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>P13383:NUCL_RAT Nucleolin - Rattus norvegicus (Rat)| Length = 713 Score = 58.2 bits (139), Expect = 5e-08 Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 2/181 (1%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S E +V S + Y+ TEE ++E+F++ I+ Q G +G AF+ F S E A Sbjct: 485 SGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNPH----GKSKGYAFIEFASFEDAK 540 Query: 419 KSLE-LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEK 595 ++L + +I R +R+E S + S P K + +V LS + +E+ Sbjct: 541 EALNSCNKMEIEGRTIRLELQGPRGSPNAR------SQPSK-----TLFVKGLSEDTTEE 589 Query: 596 DLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA-VGMNQSELRGRPVKIAY 772 L++ F+ S A R D+ TG S+GF VDF +E + A M E+ G V + + Sbjct: 590 TLKESFEGSVRA--RIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDW 647 Query: 773 A 775 A Sbjct: 648 A 648 Score = 53.5 bits (127), Expect = 1e-06 Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 12/182 (6%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL--- 427 ++A + + TE+E++E+F+ IR + G +G+A++ F+S+ A K+L Sbjct: 399 LLAKNLSFNITEDELKEVFEDAVEIRLVS-----QDGRSKGIAYIEFKSEADAEKNLEEK 453 Query: 428 ---ELDG-----YKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWN 583 E+DG Y G + R ER ++ + KT + NLS++ Sbjct: 454 QGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKT--------------LVLSNLSYS 499 Query: 584 ISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPV 760 +E+ L++ F+ + + G S+G+ ++F E ++A+ N+ E+ GR + Sbjct: 500 ATEETLQEVFEKATFIKVP---QNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTI 556 Query: 761 KI 766 ++ Sbjct: 557 RL 558 Score = 51.6 bits (122), Expect = 5e-06 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 1/138 (0%) Frame = +2 Query: 362 SGNFRGLAFVTFESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKP 541 +G R +V FES E K+LEL G K+ +++E+ + D +K Sbjct: 347 TGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPK-------------GRDSKKV 393 Query: 542 DGCLSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA 721 + NLS+NI+E +L++ F+ ++ + + G S+G +++F+ + EK Sbjct: 394 RAARTLLAKNLSFNITEDELKEVFED----AVEIRLVSQDGRSKGIAYIEFKSEADAEKN 449 Query: 722 VGMNQ-SELRGRPVKIAY 772 + Q +E+ GR V + Y Sbjct: 450 LEEKQGAEIDGRSVSLYY 467 Score = 46.2 bits (108), Expect = 2e-04 Identities = 32/106 (30%), Positives = 54/106 (50%) Frame = +2 Query: 449 GNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRI 628 G R + + + +K+QK S+P P + ++GNL+ N S +L+ Sbjct: 282 GKRKKEMTKQKEAPEAKKQKIEG--SEPTTP---FNLFIGNLNPNKSVAELKVAISELFA 336 Query: 629 ASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 + A+D RTG +R F +VDFE E LEKA+ + ++ G +K+ Sbjct: 337 KNDLAAVDVRTGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKL 382
>Q5RF26:NUCL_PONPY Nucleolin - Pongo pygmaeus (Orangutan)| Length = 712 Score = 58.2 bits (139), Expect = 5e-08 Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 2/181 (1%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S E +V S + Y+ TEE ++E+F++ I+ Q +G +G AF+ F S E A Sbjct: 484 SGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQ----NQNGKSKGYAFIEFASFEDAK 539 Query: 419 KSLE-LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEK 595 ++L + +I R +R+E S + S P K + +V LS + +E+ Sbjct: 540 EALNSCNKREIEGRAIRLELQGPRGSPNAR------SQPSK-----TLFVKGLSEDTTEE 588 Query: 596 DLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA-VGMNQSELRGRPVKIAY 772 L++ F S A R D+ TG S+GF VDF +E + A M E+ G V + + Sbjct: 589 TLKESFDGSVRA--RIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDW 646 Query: 773 A 775 A Sbjct: 647 A 647 Score = 52.8 bits (125), Expect = 2e-06 Identities = 39/174 (22%), Positives = 86/174 (49%), Gaps = 4/174 (2%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-EL 433 ++A +PY T++E++E+F+ IR + G +G+A++ F+++ A K+ E Sbjct: 397 LLAKNLPYKVTQDELKEVFEDAAEIRLVS-----KDGKSKGIAYIEFKTEADAEKTFEEK 451 Query: 434 DGYKIGNRFMRVERCRITASSK--RQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 G +I R + + ++ R K S K + + NLS++ +E+ L++ Sbjct: 452 QGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESK-----TLVLSNLSYSATEETLQE 506 Query: 608 FFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKI 766 F+ + + + G S+G+ ++F E ++A+ N+ E+ GR +++ Sbjct: 507 VFEKATFIKVP---QNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRL 557 Score = 46.6 bits (109), Expect = 2e-04 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 4/110 (3%) Frame = +2 Query: 449 GNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLR----DFFK 616 G R + + + +K+QK + +P + +VGNL++N S +L+ D F Sbjct: 280 GKRKKEMAKQKAAPEAKKQKV-----EGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFA 334 Query: 617 SSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 + +A +D R G +R F +VDFE E LEKA+ + ++ G +K+ Sbjct: 335 KNDLA----VVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKL 380 Score = 46.2 bits (108), Expect = 2e-04 Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 1/137 (0%) Frame = +2 Query: 365 GNFRGLAFVTFESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPD 544 G R +V FES E K+LEL G K+ +++E+ + D +K Sbjct: 346 GMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPK-------------GKDSKKER 392 Query: 545 GCLSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 + NL + +++ +L++ F+ + A IR + G S+G +++F+ + EK Sbjct: 393 DARTLLAKNLPYKVTQDELKEVFEDA--AEIRLV--SKDGKSKGIAYIEFKTEADAEKTF 448 Query: 725 GMNQ-SELRGRPVKIAY 772 Q +E+ GR + + Y Sbjct: 449 EEKQGTEIDGRSISLYY 465
>Q4R4J7:NUCL_MACFA Nucleolin - Macaca fascicularis (Crab eating macaque) (Cynomolgus| monkey) Length = 711 Score = 58.2 bits (139), Expect = 5e-08 Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 2/181 (1%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S E +V S + Y+ TEE ++E+F++ I+ Q +G +G AF+ F S E A Sbjct: 483 SGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQ----NQNGKSKGYAFIEFASFEDAK 538 Query: 419 KSLE-LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEK 595 ++L + +I R +R+E S + S P K + +V LS + +E+ Sbjct: 539 EALNSCNKREIEGRAIRLELQGPRGSPNAR------SQPSK-----TLFVKGLSEDTTEE 587 Query: 596 DLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA-VGMNQSELRGRPVKIAY 772 L++ F S A R D+ TG S+GF VDF +E + A M E+ G V + + Sbjct: 588 TLKESFDGSVRA--RIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDW 645 Query: 773 A 775 A Sbjct: 646 A 646 Score = 52.8 bits (125), Expect = 2e-06 Identities = 39/174 (22%), Positives = 86/174 (49%), Gaps = 4/174 (2%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-EL 433 ++A +PY T++E++E+F+ IR + G +G+A++ F+++ A K+ E Sbjct: 396 LLAKNLPYKVTQDELKEVFEDAAEIRLVS-----KDGKSKGIAYIEFKTEADAEKTFEEK 450 Query: 434 DGYKIGNRFMRVERCRITASSK--RQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 G +I R + + ++ R K S K + + NLS++ +E+ L++ Sbjct: 451 QGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESK-----TLVLSNLSYSATEETLQE 505 Query: 608 FFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKI 766 F+ + + + G S+G+ ++F E ++A+ N+ E+ GR +++ Sbjct: 506 VFEKATFIKVP---QNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRL 556 Score = 46.6 bits (109), Expect = 2e-04 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 4/110 (3%) Frame = +2 Query: 449 GNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLR----DFFK 616 G R + + + +K+QK + +P + +VGNL++N S +L+ D F Sbjct: 279 GKRKKEMAKQKAAPEAKKQKV-----EGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFA 333 Query: 617 SSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 + +A +D R G +R F +VDFE E LEKA+ + ++ G +K+ Sbjct: 334 KNDLA----VVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKL 379 Score = 46.2 bits (108), Expect = 2e-04 Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 1/137 (0%) Frame = +2 Query: 365 GNFRGLAFVTFESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPD 544 G R +V FES E K+LEL G K+ +++E+ + D +K Sbjct: 345 GMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPK-------------GKDSKKER 391 Query: 545 GCLSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 + NL + +++ +L++ F+ + A IR + G S+G +++F+ + EK Sbjct: 392 DARTLLAKNLPYKVTQDELKEVFEDA--AEIRLV--SKDGKSKGIAYIEFKTEADAEKTF 447 Query: 725 GMNQ-SELRGRPVKIAY 772 Q +E+ GR + + Y Sbjct: 448 EEKQGTEIDGRSISLYY 464
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 58.2 bits (139), Expect = 5e-08 Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 2/181 (1%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S E +V S + Y+ TEE ++E+F++ I+ Q +G +G AF+ F S E A Sbjct: 482 SGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQ----NQNGKSKGYAFIEFASFEDAK 537 Query: 419 KSLE-LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEK 595 ++L + +I R +R+E S + S P K + +V LS + +E+ Sbjct: 538 EALNSCNKREIEGRAIRLELQGPRGSPNAR------SQPSK-----TLFVKGLSEDTTEE 586 Query: 596 DLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA-VGMNQSELRGRPVKIAY 772 L++ F S A R D+ TG S+GF VDF +E + A M E+ G V + + Sbjct: 587 TLKESFDGSVRA--RIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDW 644 Query: 773 A 775 A Sbjct: 645 A 645 Score = 52.8 bits (125), Expect = 2e-06 Identities = 39/174 (22%), Positives = 86/174 (49%), Gaps = 4/174 (2%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-EL 433 ++A +PY T++E++E+F+ IR + G +G+A++ F+++ A K+ E Sbjct: 395 LLAKNLPYKVTQDELKEVFEDAAEIRLVS-----KDGKSKGIAYIEFKTEADAEKTFEEK 449 Query: 434 DGYKIGNRFMRVERCRITASSK--RQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 G +I R + + ++ R K S K + + NLS++ +E+ L++ Sbjct: 450 QGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESK-----TLVLSNLSYSATEETLQE 504 Query: 608 FFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKI 766 F+ + + + G S+G+ ++F E ++A+ N+ E+ GR +++ Sbjct: 505 VFEKATFIKVP---QNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRL 555 Score = 46.6 bits (109), Expect = 2e-04 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 4/110 (3%) Frame = +2 Query: 449 GNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLR----DFFK 616 G R + + + +K+QK + +P + +VGNL++N S +L+ D F Sbjct: 278 GKRKKEMAKQKAAPEAKKQKV-----EGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFA 332 Query: 617 SSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 + +A +D R G +R F +VDFE E LEKA+ + ++ G +K+ Sbjct: 333 KNDLA----VVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKL 378 Score = 46.2 bits (108), Expect = 2e-04 Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 1/137 (0%) Frame = +2 Query: 365 GNFRGLAFVTFESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPD 544 G R +V FES E K+LEL G K+ +++E+ + D +K Sbjct: 344 GMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPK-------------GKDSKKER 390 Query: 545 GCLSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 + NL + +++ +L++ F+ + A IR + G S+G +++F+ + EK Sbjct: 391 DARTLLAKNLPYKVTQDELKEVFEDA--AEIRLV--SKDGKSKGIAYIEFKTEADAEKTF 446 Query: 725 GMNQ-SELRGRPVKIAY 772 Q +E+ GR + + Y Sbjct: 447 EEKQGTEIDGRSISLYY 463
>P15771:NUCL_CHICK Nucleolin - Gallus gallus (Chicken)| Length = 694 Score = 58.2 bits (139), Expect = 5e-08 Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 2/170 (1%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKI 448 +PY TE+E++ +F+ +R L L++ G+ +G+A++ F+++ A K+L E G ++ Sbjct: 378 LPYRVTEDEMKNVFENALEVR-LVLNK---EGSSKGMAYIEFKTEAEAEKALEEKQGTEV 433 Query: 449 GNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRI 628 R M ++ T +Q+ + + E + V NLS+ SE+ L++ FK + Sbjct: 434 DGRAMVID---YTGEKSQQESQKGGGERESK----TLIVNNLSYAASEETLQELFK--KA 484 Query: 629 ASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 SI+ G +G+ V+F E ++A+ N +E+ GR +++ ++ Sbjct: 485 TSIKMP-QNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFS 533 Score = 57.8 bits (138), Expect = 7e-08 Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 1/178 (0%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS 424 E ++ + + Y +EE ++ELF + I+ Q ++ G +G AFV F + E A ++ Sbjct: 459 ESKTLIVNNLSYAASEETLQELFKKATSIKMPQNNQ----GRPKGYAFVEFPTAEDAKEA 514 Query: 425 LELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLR 604 L N + R+ SS +K + + +V LS + +E+ LR Sbjct: 515 LN----SCNNTEIEGRAIRLEFSSPSWQKGNMNARGGFNQQSKTLFVRGLSEDTTEETLR 570 Query: 605 DFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA-VGMNQSELRGRPVKIAYA 775 + F+ S S R D+ TG S+GF VDF E + A M E+ G V + +A Sbjct: 571 ESFEGS--ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDFA 626 Score = 56.6 bits (135), Expect = 2e-07 Identities = 43/165 (26%), Positives = 84/165 (50%), Gaps = 1/165 (0%) Frame = +2 Query: 281 TTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIGNRF 460 T EE+R F ++LQ+S G+ + +V F S E K+L+L+G K+ Sbjct: 291 TKDYEELRTAIKEFFGKKNLQVSEVR-IGSSKRFGYVDFLSAEDMDKALQLNGKKLMGLE 349 Query: 461 MRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIASIR 640 +++E+ + S K KK + +V NL + ++E ++++ F+++ +R Sbjct: 350 IKLEKAKSKESLKENKKER---------DARTLFVKNLPYRVTEDEMKNVFENA--LEVR 398 Query: 641 FAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQ-SELRGRPVKIAY 772 ++K G S+G +++F+ + EKA+ Q +E+ GR + I Y Sbjct: 399 LVLNKE-GSSKGMAYIEFKTEAEAEKALEEKQGTEVDGRAMVIDY 442
>Q6PFR5:TRA2A_MOUSE Transformer-2 protein homolog - Mus musculus (Mouse)| Length = 281 Score = 57.8 bits (138), Expect = 7e-08 Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 5/104 (4%) Frame = +2 Query: 494 SKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDS 670 S R++ T +++P+ P+ CL + LS +E+DLR+ F + ++ + D+RTG S Sbjct: 101 SNRRRHTGSRANPD-PNTCLGVF--GLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRS 157 Query: 671 RGFCHVDFE--DD--ESLEKAVGMNQSELRGRPVKIAYAIINRA 790 RGF V FE DD E++E+A GM EL GR +++ Y+I RA Sbjct: 158 RGFAFVYFERIDDSKEAMERANGM---ELDGRRIRVDYSITKRA 198 Score = 45.1 bits (105), Expect = 5e-04 Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYK 445 G+ TTE ++RE+F R+GP+ + + +G RG AFV FE + + +++E +G + Sbjct: 123 GLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGME 182 Query: 446 IGNRFMRVE 472 + R +RV+ Sbjct: 183 LDGRRIRVD 191
>Q13595:TRA2A_HUMAN Transformer-2 protein homolog - Homo sapiens (Human)| Length = 282 Score = 57.8 bits (138), Expect = 7e-08 Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 5/104 (4%) Frame = +2 Query: 494 SKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDS 670 S R++ T +++P+ P+ CL + LS +E+DLR+ F + ++ + D+RTG S Sbjct: 103 SNRRRHTGSRANPD-PNTCLGVF--GLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRS 159 Query: 671 RGFCHVDFE--DD--ESLEKAVGMNQSELRGRPVKIAYAIINRA 790 RGF V FE DD E++E+A GM EL GR +++ Y+I RA Sbjct: 160 RGFAFVYFERIDDSKEAMERANGM---ELDGRRIRVDYSITKRA 200 Score = 45.1 bits (105), Expect = 5e-04 Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYK 445 G+ TTE ++RE+F R+GP+ + + +G RG AFV FE + + +++E +G + Sbjct: 125 GLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGME 184 Query: 446 IGNRFMRVE 472 + R +RV+ Sbjct: 185 LDGRRIRVD 193
>P82277:RRP2_SPIOL Plastid-specific 30S ribosomal protein 2, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 260 Score = 57.8 bits (138), Expect = 7e-08 Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 8/179 (4%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE- 430 ++ +P +E+R + + G I ++ SG R FVT ++ E A +E Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEK 144 Query: 431 LDGYKIGNRFMRVERCR-----ITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEK 595 L+ +IG R ++V + ++ + + ++F P K Y+GNL+ ++ + Sbjct: 145 LNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFVESPYK------VYIGNLAKTVTNE 198 Query: 596 DLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKI 766 L+DFF + ++ + T S GF V F +E +E A+ +N S L G+ +++ Sbjct: 199 LLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRV 257
>Q8CGC6:RBM28_MOUSE RNA-binding protein 28 - Mus musculus (Mouse)| Length = 750 Score = 57.8 bits (138), Expect = 7e-08 Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 14/183 (7%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTF---ESDEVALKSL-ELDG 439 +P + +++ ELF + GP++ + S RG +VTF E + ALK + +G Sbjct: 11 LPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEITTFEG 70 Query: 440 YKIGNRFMRVERCRITASSKRQKKTEFQSDPEK---------PDGCLSAYVGNLSWNISE 592 KI + V + ++ SK +K E P+K D + NLS+ SE Sbjct: 71 CKID---VTVAKKKLRNKSKETRKNENAESPKKEPKHKKAKVADKKARLIIRNLSFKCSE 127 Query: 593 KDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIA 769 DL+ F K G RGF V F++ KA+ G N E++GR V + Sbjct: 128 DDLKAVFTHYGTVLEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKGANMKEIKGRTVAVD 187 Query: 770 YAI 778 +A+ Sbjct: 188 WAV 190 Score = 38.5 bits (88), Expect = 0.043 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 9/112 (8%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL--- 427 V + + + EE + E+ +FG ++ +++ PD+ + +G AF F + E A K L Sbjct: 327 VFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAA 386 Query: 428 ----ELDGYKIGNRFMRVERC--RITASSKRQKKTEFQSDPEKPDGCLSAYV 565 E G K+ R ++V+ R A+ + KK +KP G + Y+ Sbjct: 387 SPEAEGGGLKLDGRQLKVDLAVTRDEAAKLQTKKV------KKPTGTRNLYL 432
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 57.8 bits (138), Expect = 7e-08 Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 6/168 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFMR 466 +E ++E+F ++GP S+++ D+G +G FV+FE E A K++ E++G + + M Sbjct: 204 DERLKEMFGKYGPALSVKVMT-DDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMF 262 Query: 467 VERCRITASSKRQKKTEFQ---SDPEKPDGCLSAYVGNLSWNISEKDLR-DFFKSSRIAS 634 V R + + + K +F+ D ++ YV NL I ++ LR +F I S Sbjct: 263 VGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITS 322 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 + ++ G S+GF V F E KAV MN + +P+ +A A Sbjct: 323 AKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 629 Score = 57.4 bits (137), Expect = 9e-08 Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 3/178 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G V + + + + + F FG I S ++ D RG FV FE+ E A ++++ Sbjct: 99 GNVFIKNLDESIDNKALYDTFSAFGNILSCKV--VCDEHGSRGYGFVHFETQEAANRAIQ 156 Query: 431 -LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 ++G + +R + V + S+R+++ E+ + K + Y+ N ++ +K LR+ Sbjct: 157 TMNGMLLNDRKVFVGHFK----SRRERELEYGA---KVMEFTNVYIKNFGEDMDDKRLRE 209 Query: 608 FFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG-MNQSELRGRPVKIAYA 775 F + S++ +D TG SRGF V++ + E +KAV MN E+ GR + + A Sbjct: 210 IFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRA 266 Score = 52.8 bits (125), Expect = 2e-06 Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 6/168 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFMR 466 ++ +RE+F FG S+++ D+G RG FV + + E A K++ E++G ++ R + Sbjct: 204 DKRLREIFSAFGNTLSVKVM-MDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIY 262 Query: 467 VERCRITASSKRQKKTEFQSDPEKPDGC---LSAYVGNLSWNISEKDLR-DFFKSSRIAS 634 V R + + + K +F+ ++ ++ YV NL I + LR +F I S Sbjct: 263 VGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITS 322 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 + + G S+GF V F E KAV MN + +P+ +A A Sbjct: 323 AKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 57.0 bits (136), Expect = 1e-07 Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 6/168 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFMR 466 +E +++LF +FGP S+++ +SG +G FV+FE E A K++ E++G ++ + + Sbjct: 204 DERLKDLFGKFGPALSVKVMT-DESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262 Query: 467 VERCRITASSKRQKKTEFQ---SDPEKPDGCLSAYVGNLSWNISEKDLR-DFFKSSRIAS 634 V R + + + K +F+ D ++ YV NL I ++ LR +F I S Sbjct: 263 VGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITS 322 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 + ++ G S+GF V F E KAV MN + +P+ +A A Sbjct: 323 AKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 57.0 bits (136), Expect = 1e-07 Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 6/168 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFMR 466 +E +++LF +FGP S+++ +SG +G FV+FE E A K++ E++G ++ + + Sbjct: 204 DERLKDLFGKFGPALSVKVMT-DESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262 Query: 467 VERCRITASSKRQKKTEFQ---SDPEKPDGCLSAYVGNLSWNISEKDLR-DFFKSSRIAS 634 V R + + + K +F+ D ++ YV NL I ++ LR +F I S Sbjct: 263 VGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITS 322 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 + ++ G S+GF V F E KAV MN + +P+ +A A Sbjct: 323 AKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 57.0 bits (136), Expect = 1e-07 Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 6/168 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFMR 466 +E +++LF +FGP S+++ +SG +G FV+FE E A K++ E++G ++ + + Sbjct: 204 DERLKDLFGKFGPALSVKVMT-DESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262 Query: 467 VERCRITASSKRQKKTEFQ---SDPEKPDGCLSAYVGNLSWNISEKDLR-DFFKSSRIAS 634 V R + + + K +F+ D ++ YV NL I ++ LR +F I S Sbjct: 263 VGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITS 322 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 + ++ G S+GF V F E KAV MN + +P+ +A A Sbjct: 323 AKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>P09405:NUCL_MOUSE Nucleolin - Mus musculus (Mouse)| Length = 707 Score = 57.0 bits (136), Expect = 1e-07 Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 2/181 (1%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S E +V S + Y+ T+E + E+F++ I+ Q G +G AF+ F S E A Sbjct: 483 SGESKTLVLSNLSYSATKETLEEVFEKATFIKVPQNPH----GKPKGYAFIEFASFEDAK 538 Query: 419 KSLE-LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEK 595 ++L + +I R +R+E + S+ R S P K + +V LS + +E+ Sbjct: 539 EALNSCNKMEIEGRTIRLE---LQGSNSR-------SQPSK-----TLFVKGLSEDTTEE 583 Query: 596 DLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA-VGMNQSELRGRPVKIAY 772 L++ F+ S A R D+ TG S+GF VDF +E + A M E+ G V + + Sbjct: 584 TLKESFEGSVRA--RIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDW 641 Query: 773 A 775 A Sbjct: 642 A 642 Score = 51.6 bits (122), Expect = 5e-06 Identities = 39/182 (21%), Positives = 86/182 (47%), Gaps = 12/182 (6%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL--- 427 ++A + + TE+E++E+F+ ++++ G +G+A++ F+S+ A K+L Sbjct: 397 LLAKNLSFNITEDELKEVFE-----DAMEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEK 451 Query: 428 ---ELDG-----YKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWN 583 E+DG Y G + R ER T++ + KT + NLS++ Sbjct: 452 QGAEIDGRSVSLYYTGEKGQRQERTGKTSTWSGESKT--------------LVLSNLSYS 497 Query: 584 ISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPV 760 +++ L + F+ + + G +G+ ++F E ++A+ N+ E+ GR + Sbjct: 498 ATKETLEEVFEKATFIKVP---QNPHGKPKGYAFIEFASFEDAKEALNSCNKMEIEGRTI 554 Query: 761 KI 766 ++ Sbjct: 555 RL 556 Score = 51.2 bits (121), Expect = 6e-06 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 1/138 (0%) Frame = +2 Query: 362 SGNFRGLAFVTFESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKP 541 +G R +V FES E K+LEL G K+ +++E+ + D +K Sbjct: 345 TGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPK-------------GRDSKKV 391 Query: 542 DGCLSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA 721 + NLS+NI+E +L++ F+ ++ + + G S+G +++F+ + EK Sbjct: 392 RAARTLLAKNLSFNITEDELKEVFED----AMEIRLVSQDGKSKGIAYIEFKSEADAEKN 447 Query: 722 VGMNQ-SELRGRPVKIAY 772 + Q +E+ GR V + Y Sbjct: 448 LEEKQGAEIDGRSVSLYY 465 Score = 45.4 bits (106), Expect = 4e-04 Identities = 31/106 (29%), Positives = 53/106 (50%) Frame = +2 Query: 449 GNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRI 628 G R + + + +K+QK S+P P + ++GNL+ N S +L+ Sbjct: 280 GKRKKEMTKQKEAPEAKKQKVEG--SEPTTP---FNLFIGNLNPNKSVNELKFAISELFA 334 Query: 629 ASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 + +D RTG +R F +VDFE E LEKA+ + ++ G +K+ Sbjct: 335 KNDLAVVDVRTGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKL 380
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 56.6 bits (135), Expect = 2e-07 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 5/182 (2%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS 424 E + +P E+ +++LF +FG + S+++ R +SG+ R FV FE E A K+ Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMR-DNSGHSRCFGFVNFEKHEEAQKA 247 Query: 425 -LELDGYKIGNRFMRVERCRITASSKRQKKTEFQ---SDPEKPDGCLSAYVGNLSWNISE 592 + ++G ++ R + R + + + K F+ D + ++ YV NL +I + Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307 Query: 593 KDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIA 769 LR F + + + G S+GF V F E KAV MN + +P+ +A Sbjct: 308 DKLRKEFSPYGVIT-SAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 366 Query: 770 YA 775 A Sbjct: 367 LA 368
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 56.6 bits (135), Expect = 2e-07 Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 6/168 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFMR 466 +E +++LF +FGP S+++ +SG +G FV+FE E A K++ E++G ++ + + Sbjct: 204 DERLKDLFGKFGPALSVKVMT-DESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262 Query: 467 VERCRITASSKRQKKTEFQ---SDPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIAS 634 V R + + + K F+ D ++ YV NL I ++ LR F I S Sbjct: 263 VGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITS 322 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 + ++ G S+GF V F E KAV MN + +P+ +A A Sbjct: 323 AKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>Q60668:HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 - Mus musculus (Mouse)| Length = 355 Score = 56.2 bits (134), Expect = 2e-07 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 7/104 (6%) Frame = +2 Query: 470 ERCRITASSKRQKKTEFQSDPEKPDGCLSA------YVGNLSWNISEKDLRDFF-KSSRI 628 E +I AS + + S P + + ++G LSW+ ++KDL+D+F K + Sbjct: 64 EGAKIDASKNEEDEGHSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEV 123 Query: 629 ASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPV 760 +D TG SRGF V F++ ES++K + + +L G+ + Sbjct: 124 VDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVI 167 Score = 48.5 bits (114), Expect = 4e-05 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ T EE+IRE F FG + S++L + RG F+TF+ +E K +E Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242 Query: 434 DGYKIGNRFMRVERCRI-TASSKRQKKTEFQ 523 + +G + +C I A SK Q + + Q Sbjct: 243 KYHNVG-----LSKCEIKVAMSKEQYQQQQQ 268
>Q14103:HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 - Homo sapiens (Human)| Length = 355 Score = 56.2 bits (134), Expect = 2e-07 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 7/104 (6%) Frame = +2 Query: 470 ERCRITASSKRQKKTEFQSDPEKPDGCLSA------YVGNLSWNISEKDLRDFF-KSSRI 628 E +I AS + + S P + + ++G LSW+ ++KDL+D+F K + Sbjct: 64 EGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEV 123 Query: 629 ASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPV 760 +D TG SRGF V F++ ES++K + + +L G+ + Sbjct: 124 VDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVI 167 Score = 48.5 bits (114), Expect = 4e-05 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ T EE+IRE F FG + S++L + RG F+TF+ +E K +E Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242 Query: 434 DGYKIGNRFMRVERCRI-TASSKRQKKTEFQ 523 + +G + +C I A SK Q + + Q Sbjct: 243 KYHNVG-----LSKCEIKVAMSKEQYQQQQQ 268
>Q9JJ54:HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 - Rattus norvegicus| (Rat) Length = 353 Score = 55.5 bits (132), Expect = 3e-07 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 7/104 (6%) Frame = +2 Query: 470 ERCRITASSKRQKKTEFQSDPEKPDGCLSA------YVGNLSWNISEKDLRDFF-KSSRI 628 E +I AS + + S P + + ++G LSW+ ++KDL+D+F K + Sbjct: 62 EGAKIDASKNEEDEGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDV 121 Query: 629 ASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPV 760 +D TG SRGF V F++ ES++K + + +L G+ + Sbjct: 122 VDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVI 165 Score = 48.5 bits (114), Expect = 4e-05 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ T EE+IRE F FG + S++L + RG F+TF+ +E K +E Sbjct: 181 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 240 Query: 434 DGYKIGNRFMRVERCRI-TASSKRQKKTEFQ 523 + +G + +C I A SK Q + + Q Sbjct: 241 KYHNVG-----LSKCEIKVAMSKEQYQQQQQ 266
>Q98SP8:EPABA_XENLA Embryonic polyadenylate-binding protein-A - Xenopus laevis (African| clawed frog) Length = 629 Score = 55.5 bits (132), Expect = 3e-07 Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 3/178 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G V + + + + + F FG I S ++ D RG FV FE+ E A ++++ Sbjct: 99 GNVFIKNLDESIDNKALYDTFSAFGNILSCKV--VCDEHGSRGYGFVHFETHEAANRAIQ 156 Query: 431 -LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 ++G + +R + V + S+R+++ E+ + K + Y+ N ++ +K LR+ Sbjct: 157 TMNGMLLNDRKVFVGHFK----SRRERELEYGA---KVMEFTNVYIKNFGEDMDDKRLRE 209 Query: 608 FFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG-MNQSELRGRPVKIAYA 775 F + S++ +D +G SRGF V++ + E +KAV MN E+ GR + + A Sbjct: 210 IFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRA 266 Score = 55.1 bits (131), Expect = 4e-07 Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 6/168 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFMR 466 ++ +RE+F FG S+++ DSG RG FV + + E A K++ E++G ++ R + Sbjct: 204 DKRLREIFSAFGNTLSVKVM-MDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIY 262 Query: 467 VERCRITASSKRQKKTEFQSDPEKPDGC---LSAYVGNLSWNISEKDLR-DFFKSSRIAS 634 V R + + + K +F+ ++ ++ YV NL I + LR +F I S Sbjct: 263 VGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITS 322 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 + + G S+GF V F E KAV MN + +P+ +A A Sbjct: 323 AKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
>Q22037:ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 - Caenorhabditis elegans| Length = 346 Score = 55.1 bits (131), Expect = 4e-07 Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 1/158 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ TT++ +RE + +FG I + + R P + RG FVTF +++ Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + I + T KR + ++ E YV + + +E L ++F Sbjct: 84 RPHIIDGK---------TVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYF 134 Query: 614 -KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 K + +DK T RGF V F+D +S+++ V Sbjct: 135 TKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172 Score = 31.2 bits (69), Expect = 6.8 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = +2 Query: 536 KPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESL 712 +P+ +VG L+ N ++ +R+F+ I I D T SRGF V F + Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77 Query: 713 EKAVGMNQSELRGRPV 760 + A+ + G+ V Sbjct: 78 DAAMKQRPHIIDGKTV 93
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 54.7 bits (130), Expect = 6e-07 Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 11/174 (6%) Frame = +2 Query: 287 TEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFM 463 TE+E +LF +FG I SL L + + RG FV + + E A K++ EL+ + + + Sbjct: 273 TEQEFSDLFGQFGEITSLSLVK-DQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKL 331 Query: 464 RVERCRITASSKRQKKTEFQSDPE--------KPDGCLSAYVGNLSWNISEKDLR-DFFK 616 V R A K +++ E + E K G ++ ++ NL + ++ L+ +F Sbjct: 332 YVGR----AQKKHEREEELRKRYEQMKLEKMNKYQG-VNLFIKNLQDEVDDERLKAEFSA 386 Query: 617 SSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 I S + D++ G S+GF V + E KAV MNQ L G+P+ +A A Sbjct: 387 FGTITSAKIMTDEQ-GKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALA 439 Score = 51.6 bits (122), Expect = 5e-06 Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 3/172 (1%) Frame = +2 Query: 281 TTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIGNRF 460 + TE + ELF+ GP+ S+++ R + G A+V F + E K+L+ Y + Sbjct: 90 SVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTL---- 145 Query: 461 MRVERCRITASSKRQKKTEFQSDPE-KPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIAS 634 ++ CRI S Q DP + G + ++ NL I K L D F + +I S Sbjct: 146 IKGRPCRIMWS---------QRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILS 196 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYAIINR 787 + A+D+ G+++G+ V F+ ES A+ +N L + V + + + R Sbjct: 197 CKVAVDE-LGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRR 247
>Q5XI72:IF4H_RAT Eukaryotic translation initiation factor 4H - Rattus norvegicus| (Rat) Length = 248 Score = 54.7 bits (130), Expect = 6e-07 Identities = 27/74 (36%), Positives = 46/74 (62%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMN 733 +AYVGNL +N + D+ FK I S+R DK T +GFC+V+F++ +SL++A+ + Sbjct: 43 TAYVGNLPFNTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYD 102 Query: 734 QSELRGRPVKIAYA 775 + L R +++ A Sbjct: 103 GALLGDRSLRVDIA 116 Score = 43.5 bits (101), Expect = 0.001 Identities = 27/91 (29%), Positives = 47/91 (51%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIG 451 +P+ T + +I +F IRS++L R D+ F+G +V F+ + ++L DG +G Sbjct: 49 LPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLG 107 Query: 452 NRFMRVERCRITASSKRQKKTEFQSDPEKPD 544 +R +RV+ A ++Q K F PD Sbjct: 108 DRSLRVD----IAEGRKQDKGGFGFRKGGPD 134
>Q5RBR8:IF4H_PONPY Eukaryotic translation initiation factor 4H - Pongo pygmaeus| (Orangutan) Length = 228 Score = 54.7 bits (130), Expect = 6e-07 Identities = 27/74 (36%), Positives = 46/74 (62%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMN 733 +AYVGNL +N + D+ FK I S+R DK T +GFC+V+F++ +SL++A+ + Sbjct: 43 TAYVGNLPFNTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYD 102 Query: 734 QSELRGRPVKIAYA 775 + L R +++ A Sbjct: 103 GALLGDRSLRVDIA 116 Score = 44.3 bits (103), Expect = 8e-04 Identities = 37/135 (27%), Positives = 61/135 (45%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIG 451 +P+ T + +I +F IRS++L R D+ F+G +V F+ + ++L DG +G Sbjct: 49 LPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLG 107 Query: 452 NRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIA 631 +R +RV+ A ++Q K F PD ++ RD F R Sbjct: 108 DRSLRVD----IAEGRKQDKGGFGFRKGGPD---------------DRGFRDDFLGGRGG 148 Query: 632 SIRFAIDKRTGDSRG 676 S D+RTG + G Sbjct: 149 S--RPGDRRTGPAMG 161
>Q9WUK2:IF4H_MOUSE Eukaryotic translation initiation factor 4H - Mus musculus (Mouse)| Length = 248 Score = 54.7 bits (130), Expect = 6e-07 Identities = 27/74 (36%), Positives = 46/74 (62%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMN 733 +AYVGNL +N + D+ FK I S+R DK T +GFC+V+F++ +SL++A+ + Sbjct: 43 TAYVGNLPFNTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYD 102 Query: 734 QSELRGRPVKIAYA 775 + L R +++ A Sbjct: 103 GALLGDRSLRVDIA 116 Score = 43.5 bits (101), Expect = 0.001 Identities = 27/91 (29%), Positives = 47/91 (51%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIG 451 +P+ T + +I +F IRS++L R D+ F+G +V F+ + ++L DG +G Sbjct: 49 LPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLG 107 Query: 452 NRFMRVERCRITASSKRQKKTEFQSDPEKPD 544 +R +RV+ A ++Q K F PD Sbjct: 108 DRSLRVD----IAEGRKQDKGGFGFRKGGPD 134
>Q15056:IF4H_HUMAN Eukaryotic translation initiation factor 4H - Homo sapiens (Human)| Length = 248 Score = 54.7 bits (130), Expect = 6e-07 Identities = 27/74 (36%), Positives = 46/74 (62%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMN 733 +AYVGNL +N + D+ FK I S+R DK T +GFC+V+F++ +SL++A+ + Sbjct: 43 TAYVGNLPFNTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYD 102 Query: 734 QSELRGRPVKIAYA 775 + L R +++ A Sbjct: 103 GALLGDRSLRVDIA 116 Score = 45.1 bits (105), Expect = 5e-04 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 5/140 (3%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIG 451 +P+ T + +I +F IRS++L R D+ F+G +V F+ + ++L DG +G Sbjct: 49 LPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLG 107 Query: 452 NRFMRVERCRITASSKRQKKTEFQSDPEKPD--GCLSAYVGNLSWNISE---KDLRDFFK 616 +R +RV+ A ++Q K F PD G S+ W+ + RD F Sbjct: 108 DRSLRVD----IAEGRKQDKGGFGFRKGGPDDRGMGSSRESRGGWDSRDDFNSGFRDDFL 163 Query: 617 SSRIASIRFAIDKRTGDSRG 676 R S D+RTG G Sbjct: 164 GGRGGS--RPGDRRTGPPMG 181
>Q1JPH6:IF4H_BOVIN Eukaryotic translation initiation factor 4H - Bos taurus (Bovine)| Length = 228 Score = 54.7 bits (130), Expect = 6e-07 Identities = 27/74 (36%), Positives = 46/74 (62%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMN 733 +AYVGNL +N + D+ FK I S+R DK T +GFC+V+F++ +SL++A+ + Sbjct: 43 TAYVGNLPFNTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYD 102 Query: 734 QSELRGRPVKIAYA 775 + L R +++ A Sbjct: 103 GALLGDRSLRVDIA 116 Score = 43.5 bits (101), Expect = 0.001 Identities = 27/91 (29%), Positives = 47/91 (51%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIG 451 +P+ T + +I +F IRS++L R D+ F+G +V F+ + ++L DG +G Sbjct: 49 LPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLG 107 Query: 452 NRFMRVERCRITASSKRQKKTEFQSDPEKPD 544 +R +RV+ A ++Q K F PD Sbjct: 108 DRSLRVD----IAEGRKQDKGGFGFRKGGPD 134
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 54.3 bits (129), Expect = 8e-07 Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 3/178 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G V + + + + + F FG I S ++ D +G AFV FE+ E A K++E Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNILSCKV--VCDENGSKGYAFVHFETQEAADKAIE 156 Query: 431 -LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 ++G + +R + V R + S+++++ E + K + Y+ N + ++ L++ Sbjct: 157 KMNGMLLNDRKVFVGRFK----SRKEREAELGA---KAKEFTNVYIKNFGEEVDDESLKE 209 Query: 608 FFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 F + S++ D G S+GF V +E E KAV MN E+ G+ + + A Sbjct: 210 LFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
>Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - Xenopus laevis (African| clawed frog) Length = 629 Score = 54.3 bits (129), Expect = 8e-07 Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 3/178 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G V + + + + + F FG I S ++ D RG FV FE+ E A ++++ Sbjct: 99 GNVFIKNLDDSIDNKALYDTFSAFGDILSCKV--VCDEYGSRGYGFVHFETQEAANRAIQ 156 Query: 431 -LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 ++G + +R + V + S+R+++ E+ + K + Y+ N ++ +K L++ Sbjct: 157 TMNGMLLNDRKVFVGHFK----SRRERELEYGA---KVMEFTNVYIKNFGEDMDDKRLKE 209 Query: 608 FFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 F + S++ +D +G SRGF V++ + E +KAV MN E+ GR V + A Sbjct: 210 IFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRA 266 Score = 50.8 bits (120), Expect = 8e-06 Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 6/168 (3%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFMR 466 ++ ++E+F FG S+++ +SG RG FV + + E A K++ E++G ++ R + Sbjct: 204 DKRLKEIFSAFGNTLSVKVM-MDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVY 262 Query: 467 VERCRITASSKRQKKTEFQSDPEKPDGC---LSAYVGNLSWNISEKDLR-DFFKSSRIAS 634 V R + + + K +F+ ++ ++ YV NL I + LR +F I S Sbjct: 263 VGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITS 322 Query: 635 IRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 + + G S+GF V F E KAV MN + +P+ +A A Sbjct: 323 TKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
>Q13148:TADBP_HUMAN TAR DNA-binding protein 43 - Homo sapiens (Human)| Length = 414 Score = 53.1 bits (126), Expect = 2e-06 Identities = 38/157 (24%), Positives = 74/157 (47%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELD 436 ++ G+P+ TTE++++E F FG + +Q+ + +G+ +G FV F E +K + Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS-Q 164 Query: 437 GYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFK 616 + I R+ C++ S + Q ++P +VG + +++E +LR+FF Sbjct: 165 RHMIDGRWC---DCKLPNSKQSQ---------DEPLRSRKVFVGRCTEDMTEDELREFF- 211 Query: 617 SSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG 727 S+ + + R F V F DD+ + G Sbjct: 212 -SQYGDVMDVFIPK--PFRAFAFVTFADDQIAQSLCG 245
>Q13151:ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 - Homo sapiens (Human)| Length = 305 Score = 53.1 bits (126), Expect = 2e-06 Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 1/176 (0%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ T+E +R F+ FG + + P + R FVT+ + E A ++ Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 67 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + + T KR E + P +VG L +++E DL + F Sbjct: 68 SPHAVDGN---------TVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118 Query: 614 KS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAI 778 + DK++G RGF V F++ ++ +KA + ++G V++ A+ Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAV 174
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 53.1 bits (126), Expect = 2e-06 Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 3/178 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G V + + I + F FG I S +++ + GN +G FV FE++E A S++ Sbjct: 90 GNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVAT-DEKGNSKGYGFVHFETEEAANTSID 148 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDF 610 K+ + ++ + R+++ + EK + YV N + + ++ L++F Sbjct: 149 ----KVNGMLLNGKKVYVGKFIPRKEREKELG--EKAKLFTNVYVKNFTEDFDDEKLKEF 202 Query: 611 FKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSEL-RGRPVKIAYA 775 F+ +I S + + K G S+GF V FE E+ E AV +N ++ G+ + +A A Sbjct: 203 FEPYGKITSYK-VMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARA 259
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 52.4 bits (124), Expect = 3e-06 Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 4/177 (2%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 V G+ +E + ELF + GP+ + + + +G +G FV F S+E A +++ + Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + K+ + +RV + +S K + + + ++GNL I EK L D F Sbjct: 75 NMIKLYGKPIRVNK-----ASAHNKNLDVGA---------NIFIGNLDPEIDEKLLYDTF 120 Query: 614 KSSRI--ASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 + + + + D TG+S+G+ ++F ++ + A+ MN L RP+ ++YA Sbjct: 121 SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYA 177
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 52.4 bits (124), Expect = 3e-06 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 3/178 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G + + + + + + F FG I S ++ D +G FV FE+ E A ++++ Sbjct: 99 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKV--VCDENGSKGYGFVHFETQEAAERAID 156 Query: 431 -LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 ++G + +R + V R + S+++++ E + ++ + Y+ N ++ ++ L++ Sbjct: 157 KMNGMLLNDRKVFVGRFK----SRKEREAELGARAKE---FTNVYIKNFGEDMDDERLKE 209 Query: 608 FFKSSRIA-SIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYA 775 +F A S++ D G SRGF V FE E +KAV MN +L G+ + + A Sbjct: 210 WFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRA 266
>O14327:PAB2_SCHPO Polyadenylate-binding protein 2 - Schizosaccharomyces pombe| (Fission yeast) Length = 166 Score = 52.4 bits (124), Expect = 3e-06 Identities = 33/126 (26%), Positives = 66/126 (52%), Gaps = 4/126 (3%) Frame = +2 Query: 401 SDEVALKSLELDGYKIGNRF--MRVERCRITASSKR-QKKTEFQSDPEKPDGCLSAYVGN 571 SD+ AL + E + ++ R M E ++ A ++ +TE + ++ S YVGN Sbjct: 2 SDQDALDTQEKELLEMKERVAEMEAEAAKLRAMQEQLDNETEALRNDKESIDAQSVYVGN 61 Query: 572 LSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELR 748 + ++++ ++L+ F S + + DK TG +GF +++F + + A+ +N S L Sbjct: 62 VDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLH 121 Query: 749 GRPVKI 766 RP+K+ Sbjct: 122 ERPLKV 127
>Q9Y4C8:RBM19_HUMAN Probable RNA-binding protein 19 - Homo sapiens (Human)| Length = 960 Score = 51.6 bits (122), Expect = 5e-06 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 11/104 (10%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS 424 E G++ +PYT+TEE++ +LF ++GP+ L + +G AF+TF E A+K+ Sbjct: 400 ESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKA 459 Query: 425 L-ELDGYKIGNRFMRV----------ERCRITASSKRQKKTEFQ 523 E+DG R + V E SS +KK E Q Sbjct: 460 YSEVDGQVFQGRMLHVLPSTIKKEASEDASALGSSSYKKKKEAQ 503 Score = 48.1 bits (113), Expect = 5e-05 Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 16/182 (8%) Frame = +2 Query: 278 YTTTEEEIRELFDRFGPIRSLQLSRFPDSGNF---RGLAFVTFESDEVALKSLE------ 430 + TTEE+++E+F + G ++S +S+ + G FV + E A K+L+ Sbjct: 739 FDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHV 798 Query: 431 LDGYKIGNRFM-RVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 +DG+K+ R R + +T + K+Q P K V N+ + +++R+ Sbjct: 799 VDGHKLEVRISERATKPAVTLARKKQV-------PRK-QTTSKILVRNIPFQAHSREIRE 850 Query: 608 FFKS-SRIASIRFAIDKR---TGDSRGFCHVDFEDDESLEKAVG--MNQSELRGRPVKIA 769 F + + ++R + K+ TG RGF VDF + ++A + + L GR + + Sbjct: 851 LFSTFGELKTVR--LPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLE 908 Query: 770 YA 775 +A Sbjct: 909 WA 910 Score = 38.1 bits (87), Expect = 0.056 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQL-SRFPDSGNFRGLAFVTFESDEVALKS 424 K++ +P+ EIRELF FG +++++L + +G RG FV F + + A ++ Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRA 890
>P32831:NGR1_YEAST Negative growth regulatory protein NGR1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 672 Score = 51.6 bits (122), Expect = 5e-06 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 10/143 (6%) Frame = +2 Query: 377 GLAFVTFESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSD-------PE 535 G FV FE+ + A +L L+ + N + + + KR + + S P Sbjct: 129 GYCFVEFETQKDAKFALSLNATPLPNFYSPTTNSQTNPTFKRTFRLNWASGATLQSSIPS 188 Query: 536 KPDGCLSAYVGNLSWNISEKDLRDFFKS--SRIASIRFAIDKRTGDSRGFCHVDFEDDES 709 P+ S +VG+LS +E DL F++ + ++R D TG SR F V F D++ Sbjct: 189 TPE--FSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDE 246 Query: 710 LEKA-VGMNQSELRGRPVKIAYA 775 +A + M+ +GR +++AYA Sbjct: 247 RRRALIEMSGKWFQGRALRVAYA 269 Score = 36.2 bits (82), Expect = 0.21 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 V G+ TTE ++R LF FGPI ++++ N + FV FE A S++ L Sbjct: 362 VFVGGLVPKTTEFQLRSLFKPFGPILNVRIP------NGKNCGFVKFEKRIDAEASIQGL 415 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKT 514 G+ +G +R+ R ++S+ + T Sbjct: 416 QGFIVGGSPIRLSWGRPSSSNAKTNST 442
>Q5RJM0:MK67I_RAT MKI67 FHA domain-interacting nucleolar phosphoprotein - Rattus| norvegicus (Rat) Length = 271 Score = 51.6 bits (122), Expect = 5e-06 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVA-LKSL 427 G V +P T +E I + +FG IR +LSR +GN RG AFV FES++VA + + Sbjct: 44 GVVYLGHLPSTLSESHIYDYCAQFGDIRRFRLSRSKRTGNSRGFAFVEFESEDVAKIVAE 103 Query: 428 ELDGYKIGNRFM 463 +D Y G R + Sbjct: 104 TMDNYLFGERLL 115 Score = 37.4 bits (85), Expect = 0.096 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 Y+G+L +SE + D+ I R + KRTG+SRGF V+FE ++ Sbjct: 47 YLGHLPSTLSESHIYDYCAQFGDIRRFRLSRSKRTGNSRGFAFVEFESED 96
>Q8BGD9:IF4B_MOUSE Eukaryotic translation initiation factor 4B - Mus musculus (Mouse)| Length = 611 Score = 51.6 bits (122), Expect = 5e-06 Identities = 23/75 (30%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDS-RGFCHVDFEDDESLEKAVGM 730 +A++GNL ++++E ++DFF+ I+++R + D +GF + +FED +SL A+ + Sbjct: 97 TAFLGNLPYDVTEDSIKDFFRGLNISAVRLPREPSNPDRLKGFGYAEFEDLDSLLSALSL 156 Query: 731 NQSELRGRPVKIAYA 775 N+ L R +++ A Sbjct: 157 NEESLGNRRIRVDVA 171 Score = 37.4 bits (85), Expect = 0.096 Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDS-GNFRGLAFVTFESDEVALKSLELDGYKI 448 +PY TE+ I++ F R I +++L R P + +G + FE + L +L L+ + Sbjct: 103 LPYDVTEDSIKDFF-RGLNISAVRLPREPSNPDRLKGFGYAEFEDLDSLLSALSLNEESL 161 Query: 449 GNRFMRVE 472 GNR +RV+ Sbjct: 162 GNRRIRVD 169
>Q8R3C6:RBM19_MOUSE Probable RNA-binding protein 19 - Mus musculus (Mouse)| Length = 952 Score = 51.2 bits (121), Expect = 6e-06 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 10/161 (6%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKI 448 G P+ TE+ + E P+ ++++ R GN G FV S+E K+L+ + + Sbjct: 299 GAPFNVTEKNVIEFLAPLKPV-AIRIVRNAH-GNKTGYVFVDLSSEEEVKKALKCNRDYM 356 Query: 449 GNRFMRV--ERCRITASSKRQKKTEFQS-----DPEKPDGCLSA--YVGNLSWNISEKDL 601 G R++ V E+ TA + T +Q + E+ D S +V NLS+ SE+DL Sbjct: 357 GGRYIEVFREKQAPTARGPPKSTTPWQGRTLGENEEEEDLADSGRLFVRNLSYTSSEEDL 416 Query: 602 RDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA 721 F + ++ + + ID T +GF V F E KA Sbjct: 417 EKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKA 457 Score = 49.3 bits (116), Expect = 2e-05 Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 14/180 (7%) Frame = +2 Query: 278 YTTTEEEIRELFDRFGPIRSLQLSRFPDSGNF---RGLAFVTFESDEVALKSLE------ 430 ++TTEE ++ +F + G I+S +S+ + G FV ++ E A K+L+ Sbjct: 731 FSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHT 790 Query: 431 LDGYKIGNRFM-RVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 +DG+K+ R R + +T++ K+Q K V N+ + +++++R+ Sbjct: 791 VDGHKLEVRISERATKPALTSTRKKQVP--------KKQTTSKILVRNIPFQANQREIRE 842 Query: 608 FFKS-SRIASIRFAIDKR-TGDSRGFCHVDFEDDESLEKAVG--MNQSELRGRPVKIAYA 775 F + + ++R TG RGF VDF + +KA + + L GR + + +A Sbjct: 843 LFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWA 902 Score = 44.3 bits (103), Expect = 8e-04 Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 1/101 (0%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS 424 + G++ + YT++EE++ +LF +GP+ L + +G AFVTF E A+K+ Sbjct: 398 DSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKA 457 Query: 425 -LELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPD 544 E+DG R + V I + ++ S +K + Sbjct: 458 YAEVDGQVFQGRMLHVLPSTIKKEASQEANAPGSSYKKKKE 498 Score = 41.6 bits (96), Expect = 0.005 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 6/101 (5%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQL-SRFPDSGNFRGLAFVTFESDEVALKSLE 430 K++ +P+ + EIRELF FG +++++L + +G RG FV F + + A K+ Sbjct: 825 KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFN 884 Query: 431 L---DGYKIGNRF-MRVERCRITASSKRQKKT-EFQSDPEK 538 + G R + +T + R+K FQ P+K Sbjct: 885 ALCHSTHLYGRRLVLEWADSEVTVQTLRRKTARHFQEPPKK 925
>P78795:IF34_SCHPO Probable eukaryotic translation initiation factor 3 RNA-binding| subunit - Schizosaccharomyces pombe (Fission yeast) Length = 282 Score = 51.2 bits (121), Expect = 6e-06 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Frame = +2 Query: 284 TTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYKIGNRF 460 T EEE+R+LF RFG I+ + L++ ++G +G AFV++ + A+K+ + LDGY N Sbjct: 213 TREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDGYGWNNLI 272 Query: 461 MRVE 472 +R E Sbjct: 273 LRCE 276 Score = 35.8 bits (81), Expect = 0.28 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = +2 Query: 542 DGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEK 718 D + V NLS + E++LRD F+ I + A DK TG ++GF V + D + K Sbjct: 199 DDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIK 258 Query: 719 A 721 A Sbjct: 259 A 259
>P25299:RNA15_YEAST mRNA 3'-end-processing protein RNA15 - Saccharomyces cerevisiae| (Baker's yeast) Length = 296 Score = 50.8 bits (120), Expect = 8e-06 Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-EL 433 V +PY TEE+I +L GP+ +L++ P +G +G AF+ F E + ++ L Sbjct: 20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNL 79 Query: 434 DGYKIGNRFMR 466 +GY++G+RF++ Sbjct: 80 NGYQLGSRFLK 90 Score = 37.7 bits (86), Expect = 0.073 Identities = 20/74 (27%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 Y+G++ ++ +E+ + D + + +++ D +TG S+G+ ++F D ES AV +N Sbjct: 21 YLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNLN 80 Query: 734 QSELRGRPVKIAYA 775 +L R +K Y+ Sbjct: 81 GYQLGSRFLKCGYS 94
>Q6NVP7:PABP2_XENTR Polyadenylate-binding protein 2 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 296 Score = 50.8 bits (120), Expect = 8e-06 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGM 730 S YVGN+ + + ++L F + + DK TG +GF +++F D ES+ ++ + Sbjct: 164 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLAL 223 Query: 731 NQSELRGRPVKIAYAIINR 787 ++S RGR +K+ NR Sbjct: 224 DESLFRGRQIKVVPKRTNR 242
>Q28ZX3:PABP2_DROPS Polyadenylate-binding protein 2 - Drosophila pseudoobscura (Fruit| fly) Length = 225 Score = 50.8 bits (120), Expect = 8e-06 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 1/131 (0%) Frame = +2 Query: 398 ESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLS 577 E+ + +K +E + KI V++ S+ + ++ S YVGN+ Sbjct: 45 EAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGNVD 104 Query: 578 WNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGR 754 + S ++L F I + +K G +GF +++F E +E A+ MN++ RGR Sbjct: 105 YGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGR 164 Query: 755 PVKIAYAIINR 787 +K+ NR Sbjct: 165 QIKVMSKRTNR 175
>Q7KNF2:PABP2_DROME Polyadenylate-binding protein 2 - Drosophila melanogaster (Fruit| fly) Length = 224 Score = 50.8 bits (120), Expect = 8e-06 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 1/131 (0%) Frame = +2 Query: 398 ESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLS 577 E+ + +K +E + KI V++ S+ + ++ S YVGN+ Sbjct: 45 EAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVD 104 Query: 578 WNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGR 754 + S ++L F I + +K G +GF +++F E +E A+ MN++ RGR Sbjct: 105 YGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGR 164 Query: 755 PVKIAYAIINR 787 +K+ NR Sbjct: 165 QIKVMSKRTNR 175
>P28049:LAB_XENLA Lupus La protein homolog B - Xenopus laevis (African clawed frog)| Length = 427 Score = 50.8 bits (120), Expect = 8e-06 Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 25/200 (12%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S++ V G P T +EI+E + GPI ++Q+ R F+G F+ F +++ A Sbjct: 106 SFKHRSVYIKGFPTITNLDEIKEWLNDKGPIENIQMRRTLQR-EFKGSVFLVFNTEDGAK 164 Query: 419 KSLELDGYKIGNRFMRV-----------ERCRITASSK----RQKKTEFQSDPEKPD--- 544 K LE K + M + E ++ S + +Q+K E Q E + Sbjct: 165 KFLEDKNLKYKDNDMIILSREEYFAKKNEERKLNKSEEKAKSKQEKEEAQKQAEDAERKL 224 Query: 545 -----GCLSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDES 709 GCL + G+L S +DL F++ I + ID G G E+ Sbjct: 225 MEERVGCLLKFSGDLDNMTSREDLHALFQTH--GEIEW-IDFSRGAKEGIVLFKMNAKEA 281 Query: 710 LEKAVGMNQS--ELRGRPVK 763 L+KA N +L+G+ VK Sbjct: 282 LDKAKAANNDNLKLKGKNVK 301
>Q7ZXB8:PAB2B_XENLA Polyadenylate-binding protein 2-B - Xenopus laevis (African clawed| frog) Length = 295 Score = 50.4 bits (119), Expect = 1e-05 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGM 730 S YVGN+ + + ++L F + + DK TG +GF +++F D ES+ ++ + Sbjct: 163 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSLAL 222 Query: 731 NQSELRGRPVKIAYAIINR 787 ++S RGR +K+ NR Sbjct: 223 DESLFRGRQIKVVPKRTNR 241
>Q3SZM1:MK67I_BOVIN MKI67 FHA domain-interacting nucleolar phosphoprotein - Bos taurus| (Bovine) Length = 296 Score = 50.4 bits (119), Expect = 1e-05 Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G + +P T E +IR F +FG + +LSR +GN +G FV FES++VA + E Sbjct: 45 GVIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGFVEFESEDVAKIAAE 104 Query: 431 -LDGYKIGNRFMR 466 ++ Y G R ++ Sbjct: 105 TMNNYLFGERLLK 117 Score = 36.6 bits (83), Expect = 0.16 Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Frame = +2 Query: 500 RQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRG 676 R++ T+ Q + G + YVG+L + E +R +F + R + K+TG+S+G Sbjct: 30 RRRATKQQEKQKPTPGVI--YVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKG 87 Query: 677 FCHVDFEDDE 706 + V+FE ++ Sbjct: 88 YGFVEFESED 97
>O97018:SXL_CHRRU Sex-lethal homolog - Chrysomya rufifacies (Hairy maggot blowfly)| Length = 307 Score = 50.1 bits (118), Expect = 1e-05 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 2/158 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 ++ + +P T+ E+ LF GPI + ++ + +G G AFV F S+ A +++ L Sbjct: 87 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSL 146 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 +G + N+ ++V R S + + YV NL I++ +L F Sbjct: 147 NGVTVRNKRLKVSYARPGGESIKD---------------TNLYVTNLPRTITDDELEKIF 191 Query: 614 -KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 K I DK TG RG V F E ++A+ Sbjct: 192 GKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAI 229
>P49311:GRP2_SINAL Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White| mustard) (Brassica hirta) Length = 169 Score = 50.1 bits (118), Expect = 1e-05 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 2/78 (2%) Frame = +2 Query: 539 PDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLE 715 PD +VG L+W E+ L F + + D+ TG SRGF V F+D++S++ Sbjct: 4 PDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMK 63 Query: 716 KAV-GMNQSELRGRPVKI 766 A+ GMN +L GR + + Sbjct: 64 DAIEGMNGQDLDGRSITV 81 Score = 35.4 bits (80), Expect = 0.36 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 1/85 (1%) Frame = +2 Query: 242 YECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALK 421 Y C G+ + T E + F +FG + ++ ++G RG FVTF+ ++ Sbjct: 8 YRC---FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKD 64 Query: 422 SLE-LDGYKIGNRFMRVERCRITAS 493 ++E ++G + R + V + S Sbjct: 65 AIEGMNGQDLDGRSITVNEAQSRGS 89
>O43390:HNRPR_HUMAN Heterogeneous nuclear ribonucleoprotein R - Homo sapiens (Human)| Length = 633 Score = 49.7 bits (117), Expect = 2e-05 Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 +V +P E+E+ LF++ GPI L+L P SG RG AF+TF E A ++++L Sbjct: 166 EVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKL 225 Query: 434 -DGYKIG-NRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 D Y+I + + V C A+++ +VG++ N +++++ + Sbjct: 226 CDSYEIRPGKHLGV--CISVANNR-------------------LFVGSIPKNKTKENILE 264 Query: 608 FFKSSRIASIRFAIDKRTGD---SRGFCHVDFEDDESLEKA 721 F + + + D +RGFC +++ED +S +A Sbjct: 265 EFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQA 305
>O61374:SXL_CERCA Sex-lethal homolog - Ceratitis capitata (Mediterranean fruit fly)| Length = 348 Score = 49.3 bits (116), Expect = 2e-05 Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 2/158 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 ++ + +P T+ E+ LF GPI + ++ R +G G AFV F ++ + ++++ L Sbjct: 112 LIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSL 171 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 +G + N+ ++V R S + + YV NL I++ L F Sbjct: 172 NGITVRNKRLKVSYARPGGESIKD---------------TNLYVTNLPRTITDDQLDTIF 216 Query: 614 -KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 K I DK TG RG V F E ++A+ Sbjct: 217 GKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAI 254
>P40561:SGN1_YEAST RNA-binding protein SGN1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 250 Score = 49.3 bits (116), Expect = 2e-05 Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGM 730 S +VGN++ +++ + + D FK +I I D+ TG +G+ +++FE EKA+ + Sbjct: 65 SIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQL 124 Query: 731 NQSELRGRPVKIA 769 N EL+G+ + ++ Sbjct: 125 NGGELKGKKIAVS 137
>P23588:IF4B_HUMAN Eukaryotic translation initiation factor 4B - Homo sapiens (Human)| Length = 611 Score = 49.3 bits (116), Expect = 2e-05 Identities = 21/75 (28%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDS-RGFCHVDFEDDESLEKAVGM 730 +A++GNL ++++E+ +++FF+ I+++R + + +GF + +FED +SL A+ + Sbjct: 97 TAFLGNLPYDVTEESIKEFFRGLNISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSL 156 Query: 731 NQSELRGRPVKIAYA 775 N+ L R +++ A Sbjct: 157 NEESLGNRRIRVDVA 171 Score = 39.3 bits (90), Expect = 0.025 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDS-GNFRGLAFVTFESDEVALKSLELDGYKI 448 +PY TEE I+E F R I +++L R P + +G + FE + L +L L+ + Sbjct: 103 LPYDVTEESIKEFF-RGLNISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESL 161 Query: 449 GNRFMRVE 472 GNR +RV+ Sbjct: 162 GNRRIRVD 169
>O43040:CTF1_SCHPO Cleavage and termination factor 1 - Schizosaccharomyces pombe| (Fission yeast) Length = 363 Score = 49.3 bits (116), Expect = 2e-05 Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 2/80 (2%) Frame = +2 Query: 239 SYECGKVVASG-MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVT-FESDEV 412 S G VV G +PY +E+++ E+F++ GP+++ +L P++G+ +G F F+S+ Sbjct: 2 SMTAGNVVFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETT 61 Query: 413 ALKSLELDGYKIGNRFMRVE 472 A+ +L+ ++G R +RVE Sbjct: 62 AMAVRKLNNSELGPRKIRVE 81 Score = 42.7 bits (99), Expect = 0.002 Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 +VGN+ +++SE+ + + F + + + +D TG +G+ +F D E+ AV +N Sbjct: 10 FVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKLN 69 Query: 734 QSELRGRPVKIAY 772 SEL R +++ + Sbjct: 70 NSELGPRKIRVEF 82
>Q43349:ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 342 Score = 48.9 bits (115), Expect = 3e-05 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 YVGNLSW + + L + F + ++ R D+ +G S+GF V + ++KA+ +N Sbjct: 260 YVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLN 319 Query: 734 QSELRGRPVKIAYA 775 ++L GR ++++ A Sbjct: 320 GADLDGRQIRVSEA 333 Score = 43.9 bits (102), Expect = 0.001 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Frame = +2 Query: 551 LSAYVGNLSWNISEKDLRDFFKSS-RIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV- 724 L +VGNLS+N+ L F+S+ + + DK TG SRGF V +E A Sbjct: 99 LKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQ 158 Query: 725 GMNQSELRGRPVKI 766 N E GRP+++ Sbjct: 159 QFNGYEFEGRPLRV 172 Score = 31.6 bits (70), Expect = 5.2 Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFE-SDEVALKSLE 430 K+ + + ++ +LF+ G + +++ +G RG FVT + EV + + Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159 Query: 431 LDGYKIGNRFMRV 469 +GY+ R +RV Sbjct: 160 FNGYEFEGRPLRV 172
>Q9DDY9:PAB2A_XENLA Polyadenylate-binding protein 2-A - Xenopus laevis (African clawed| frog) Length = 296 Score = 48.9 bits (115), Expect = 3e-05 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGM 730 S YVGN+ + + ++L F + + DK TG +GF +++F D ES+ ++ + Sbjct: 164 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLAL 223 Query: 731 NQSELRGRPVKIAYAIINR 787 ++S RGR +K+ NR Sbjct: 224 DESLFRGRQIKVVPKRTNR 242
>Q01560:NOP3_YEAST Nucleolar protein 3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 414 Score = 48.9 bits (115), Expect = 3e-05 Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 2/166 (1%) Frame = +2 Query: 275 PYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIG 451 P E E+ E+F FGP++ +++ G AFV FE E A K++ E+ G Sbjct: 133 PLDVQESELNEIFGPFGPMKEVKI--------LNGFAFVEFEEAESAAKAIEEVHGKSFA 184 Query: 452 NRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIA 631 N+ + V ++ A KR + T P+GC SW +DL+D + + + Sbjct: 185 NQPLEVVYSKLPA--KRYRITM----KNLPEGC--------SW----QDLKDLARENSLE 226 Query: 632 SIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKI 766 + +++ R D G ++F +E L +A+ +N E RG + + Sbjct: 227 TTFSSVNTRDFDGTG--ALEFPSEEILVEALERLNNIEFRGSVITV 270
>Q6GL69:MK67I_XENTR MKI67 FHA domain-interacting nucleolar phosphoprotein-like -| Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) Length = 276 Score = 48.9 bits (115), Expect = 3e-05 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVA-LKSL 427 G + +P E ++RE F +FG + L+LSR +GN +G A+V FE DEVA + + Sbjct: 41 GVIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVAD 100 Query: 428 ELDGYKIGNRFMRVE 472 ++ Y R ++ E Sbjct: 101 TMNNYLFCERLLKCE 115 Score = 40.0 bits (92), Expect = 0.015 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 Y+G++ + E LR++F + +R + K+TG+S+G+ +V+FE DE Sbjct: 44 YIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDE 93
>Q09295:YQO4_CAEEL Putative RNA-binding protein EEED8.4 - Caenorhabditis elegans| Length = 191 Score = 48.5 bits (114), Expect = 4e-05 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%) Frame = +2 Query: 527 DPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDD 703 + +K S ++GN+ +N + +++ + FK +I DK T + F +++F+D Sbjct: 47 EEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDS 106 Query: 704 ESLEKAVGMNQSELRGRPVKI 766 S+E A+ MN S R RP+ + Sbjct: 107 SSIENALVMNGSLFRSRPIVV 127
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 48.5 bits (114), Expect = 4e-05 Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 2/158 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 ++ + +P T+ E+ LF GPI + ++ + +G G AFV F S+ A +++ + Sbjct: 104 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTV 163 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 +G + N+ ++V R S + + YV NL I++ +L F Sbjct: 164 NGITVRNKRLKVSYARPGGESIKD---------------TNLYVTNLPRTITDDELEKIF 208 Query: 614 -KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 K I DK TG RG V F E ++A+ Sbjct: 209 GKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAI 246
>Q24668:SXL_DROSU Protein sex-lethal - Drosophila subobscura (Fruit fly)| Length = 354 Score = 48.5 bits (114), Expect = 4e-05 Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 2/158 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 ++ + +P T+ E+ LF GPI + ++ R +G G AFV F S+ + ++++ L Sbjct: 129 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 188 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 +G + N+ ++V R S + + YV NL I++ L F Sbjct: 189 NGITVRNKRLKVSYARPGGESIKD---------------TNLYVTNLPRTITDDQLDTIF 233 Query: 614 -KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 K I DK TG RG V + E ++A+ Sbjct: 234 GKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 271
>P19339:SXL_DROME Protein sex-lethal - Drosophila melanogaster (Fruit fly)| Length = 354 Score = 48.5 bits (114), Expect = 4e-05 Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 2/158 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 ++ + +P T+ E+ LF GPI + ++ R +G G AFV F S+ + ++++ L Sbjct: 127 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 186 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 +G + N+ ++V R S + + YV NL I++ L F Sbjct: 187 NGITVRNKRLKVSYARPGGESIKD---------------TNLYVTNLPRTITDDQLDTIF 231 Query: 614 -KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 K I DK TG RG V + E ++A+ Sbjct: 232 GKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 269
>Q8CCS6:PABP2_MOUSE Polyadenylate-binding protein 2 - Mus musculus (Mouse)| Length = 302 Score = 48.5 bits (114), Expect = 4e-05 Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGM 730 S YVGN+ + + ++L F + + DK +G +GF +++F D ES+ ++ + Sbjct: 169 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 228 Query: 731 NQSELRGRPVKIAYAIINR 787 ++S RGR +K+ NR Sbjct: 229 DESLFRGRQIKVIPKRTNR 247
>Q86U42:PABP2_HUMAN Polyadenylate-binding protein 2 - Homo sapiens (Human)| Length = 306 Score = 48.5 bits (114), Expect = 4e-05 Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGM 730 S YVGN+ + + ++L F + + DK +G +GF +++F D ES+ ++ + Sbjct: 173 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 232 Query: 731 NQSELRGRPVKIAYAIINR 787 ++S RGR +K+ NR Sbjct: 233 DESLFRGRQIKVIPKRTNR 251
>Q28165:PABP2_BOVIN Polyadenylate-binding protein 2 - Bos taurus (Bovine)| Length = 306 Score = 48.5 bits (114), Expect = 4e-05 Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGM 730 S YVGN+ + + ++L F + + DK +G +GF +++F D ES+ ++ + Sbjct: 173 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 232 Query: 731 NQSELRGRPVKIAYAIINR 787 ++S RGR +K+ NR Sbjct: 233 DESLFRGRQIKVIPKRTNR 251
>P17132:HNRPC_RAT Heterogeneous nuclear ribonucleoprotein C - Rattus norvegicus (Rat)| Length = 158 Score = 48.5 bits (114), Expect = 4e-05 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 K+ G+ T EE+IRE F FG + S++L + RG F+TF+ +E K +E Sbjct: 35 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 94 Query: 434 DGYKIGNRFMRVERCRI-TASSKRQKKTEFQ 523 + +G + +C I A SK Q + + Q Sbjct: 95 KYHNVG-----LSKCEIKVAMSKEQYQQQQQ 120
>Q5RDA3:CSTF2_PONPY Cleavage stimulation factor 64 kDa subunit - Pongo pygmaeus| (Orangutan) Length = 577 Score = 48.5 bits (114), Expect = 4e-05 Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-EL 433 V +PY TEE+++++F GP+ S +L ++G +G F ++ E AL ++ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 434 DGYKIGNRFMRVERCRITASSKRQKK 511 +G + R +RV+ A+S++ K+ Sbjct: 78 NGREFSGRALRVD----NAASEKNKE 99 Score = 45.8 bits (107), Expect = 3e-04 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = +2 Query: 527 DPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDD 703 DP S +VGN+ + +E+ L+D F + S R D+ TG +G+ +++D Sbjct: 8 DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67 Query: 704 ESLEKAV-GMNQSELRGRPVKI 766 E+ A+ +N E GR +++ Sbjct: 68 ETALSAMRNLNGREFSGRALRV 89
>Q8BIQ5:CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit - Mus musculus (Mouse)| Length = 580 Score = 48.5 bits (114), Expect = 4e-05 Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-EL 433 V +PY TEE+++++F GP+ S +L ++G +G F ++ E AL ++ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 434 DGYKIGNRFMRVERCRITASSKRQKK 511 +G + R +RV+ A+S++ K+ Sbjct: 78 NGREFSGRALRVD----NAASEKNKE 99 Score = 45.8 bits (107), Expect = 3e-04 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = +2 Query: 527 DPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDD 703 DP S +VGN+ + +E+ L+D F + S R D+ TG +G+ +++D Sbjct: 8 DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67 Query: 704 ESLEKAV-GMNQSELRGRPVKI 766 E+ A+ +N E GR +++ Sbjct: 68 ETALSAMRNLNGREFSGRALRV 89
>P33240:CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit - Homo sapiens (Human)| Length = 577 Score = 48.5 bits (114), Expect = 4e-05 Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-EL 433 V +PY TEE+++++F GP+ S +L ++G +G F ++ E AL ++ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 434 DGYKIGNRFMRVERCRITASSKRQKK 511 +G + R +RV+ A+S++ K+ Sbjct: 78 NGREFSGRALRVD----NAASEKNKE 99 Score = 45.8 bits (107), Expect = 3e-04 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = +2 Query: 527 DPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDD 703 DP S +VGN+ + +E+ L+D F + S R D+ TG +G+ +++D Sbjct: 8 DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67 Query: 704 ESLEKAV-GMNQSELRGRPVKI 766 E+ A+ +N E GR +++ Sbjct: 68 ETALSAMRNLNGREFSGRALRV 89
>Q8HXM1:CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit - Bos taurus (Bovine)| Length = 572 Score = 48.5 bits (114), Expect = 4e-05 Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-EL 433 V +PY TEE+++++F GP+ S +L ++G +G F ++ E AL ++ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 434 DGYKIGNRFMRVERCRITASSKRQKK 511 +G + R +RV+ A+S++ K+ Sbjct: 78 NGREFSGRALRVD----NAASEKNKE 99 Score = 45.8 bits (107), Expect = 3e-04 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = +2 Query: 527 DPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDD 703 DP S +VGN+ + +E+ L+D F + S R D+ TG +G+ +++D Sbjct: 8 DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67 Query: 704 ESLEKAV-GMNQSELRGRPVKI 766 E+ A+ +N E GR +++ Sbjct: 68 ETALSAMRNLNGREFSGRALRV 89
>O13741:NOP12_SCHPO Nucleolar protein 12 - Schizosaccharomyces pombe (Fission yeast)| Length = 438 Score = 48.1 bits (113), Expect = 5e-05 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 2/133 (1%) Frame = +2 Query: 383 AFVTFESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAY 562 A++ F A +L L+G +R +RV+ S P D + Sbjct: 229 AYIVFRDSSSARSALSLNGTMFMDRHLRVDSV---------------SHPMPQDTKRCVF 273 Query: 563 VGNLSWNISEKDL-RDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQS 739 VGNL++ E+ L R F I +R D +T +GF ++ F+D ++KA+ +N+ Sbjct: 274 VGNLAFEAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKGFAYIQFKDTMGVDKALLLNEK 333 Query: 740 EL-RGRPVKIAYA 775 ++ GR ++I A Sbjct: 334 KMPEGRTLRIMRA 346
>Q9SVM8:GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 158 Score = 48.1 bits (113), Expect = 5e-05 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG-MN 733 ++G LSW + LRD F + + +D+ TG SRGF V+F D+ + A+ M+ Sbjct: 38 FIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMD 97 Query: 734 QSELRGRPVKI 766 EL GR +++ Sbjct: 98 GKELNGRHIRV 108
>P49310:GRP1_SINAL Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White| mustard) (Brassica hirta) Length = 166 Score = 48.1 bits (113), Expect = 5e-05 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%) Frame = +2 Query: 539 PDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLE 715 PD +VG L+W ++ L F + + D+ TG SRGF V F+D++S++ Sbjct: 4 PDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMK 63 Query: 716 KAV-GMNQSELRGRPVKI 766 A+ GMN +L GR + + Sbjct: 64 DAIEGMNGQDLDGRSITV 81
>Q03878:GRP1_DAUCA Glycine-rich RNA-binding protein - Daucus carota (Carrot)| Length = 157 Score = 48.1 bits (113), Expect = 5e-05 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 2/71 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 +VG L+W +++ L F I + D+ TG SRGF V F+D++S+ A+ GMN Sbjct: 9 FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMN 68 Query: 734 QSELRGRPVKI 766 EL GR + + Sbjct: 69 GQELDGRNITV 79 Score = 39.7 bits (91), Expect = 0.019 Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Frame = +2 Query: 242 YECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALK 421 Y C G+ + T +E + + F +FG I ++ ++G RG FVTF+ ++ Sbjct: 6 YRC---FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRD 62 Query: 422 SLE-LDGYKIGNRFMRVERCRITAS 493 ++E ++G ++ R + V + S Sbjct: 63 AIEGMNGQELDGRNITVNEAQSRGS 87
>P62997:TRA2B_RAT Splicing factor, arginine/serine-rich 10 - Rattus norvegicus (Rat)| Length = 288 Score = 47.8 bits (112), Expect = 7e-05 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Frame = +2 Query: 494 SKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDS 670 S R++ +++P+ P+ CL + LS +E+DLR+ F K IA + D+++ S Sbjct: 102 STRRRHVGNRANPD-PNCCLGVF--GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRS 158 Query: 671 RGFCHVDFED-DESLEKAVGMNQSELRGRPVKIAYAIINR 787 RGF V FE+ D++ E N EL GR +++ ++I R Sbjct: 159 RGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 198 Score = 44.3 bits (103), Expect = 8e-04 Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYK 445 G+ TTE ++RE+F ++GPI + + S RG AFV FE+ + A ++ E +G + Sbjct: 124 GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGME 183 Query: 446 IGNRFMRVE 472 + R +RV+ Sbjct: 184 LDGRRIRVD 192
>P62996:TRA2B_MOUSE Splicing factor, arginine/serine-rich 10 - Mus musculus (Mouse)| Length = 288 Score = 47.8 bits (112), Expect = 7e-05 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Frame = +2 Query: 494 SKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDS 670 S R++ +++P+ P+ CL + LS +E+DLR+ F K IA + D+++ S Sbjct: 102 STRRRHVGNRANPD-PNCCLGVF--GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRS 158 Query: 671 RGFCHVDFED-DESLEKAVGMNQSELRGRPVKIAYAIINR 787 RGF V FE+ D++ E N EL GR +++ ++I R Sbjct: 159 RGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 198 Score = 44.3 bits (103), Expect = 8e-04 Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYK 445 G+ TTE ++RE+F ++GPI + + S RG AFV FE+ + A ++ E +G + Sbjct: 124 GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGME 183 Query: 446 IGNRFMRVE 472 + R +RV+ Sbjct: 184 LDGRRIRVD 192
>P62995:TRA2B_HUMAN Splicing factor, arginine/serine-rich 10 - Homo sapiens (Human)| Length = 288 Score = 47.8 bits (112), Expect = 7e-05 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Frame = +2 Query: 494 SKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDS 670 S R++ +++P+ P+ CL + LS +E+DLR+ F K IA + D+++ S Sbjct: 102 STRRRHVGNRANPD-PNCCLGVF--GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRS 158 Query: 671 RGFCHVDFED-DESLEKAVGMNQSELRGRPVKIAYAIINR 787 RGF V FE+ D++ E N EL GR +++ ++I R Sbjct: 159 RGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 198 Score = 44.3 bits (103), Expect = 8e-04 Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYK 445 G+ TTE ++RE+F ++GPI + + S RG AFV FE+ + A ++ E +G + Sbjct: 124 GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGME 183 Query: 446 IGNRFMRVE 472 + R +RV+ Sbjct: 184 LDGRRIRVD 192
>Q3ZBT6:TRA2B_BOVIN Splicing factor, arginine/serine-rich 10 - Bos taurus (Bovine)| Length = 288 Score = 47.8 bits (112), Expect = 7e-05 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Frame = +2 Query: 494 SKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDS 670 S R++ +++P+ P+ CL + LS +E+DLR+ F K IA + D+++ S Sbjct: 102 STRRRHVGNRANPD-PNCCLGVF--GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRS 158 Query: 671 RGFCHVDFED-DESLEKAVGMNQSELRGRPVKIAYAIINR 787 RGF V FE+ D++ E N EL GR +++ ++I R Sbjct: 159 RGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 198 Score = 44.3 bits (103), Expect = 8e-04 Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYK 445 G+ TTE ++RE+F ++GPI + + S RG AFV FE+ + A ++ E +G + Sbjct: 124 GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGME 183 Query: 446 IGNRFMRVE 472 + R +RV+ Sbjct: 184 LDGRRIRVD 192
>Q921F2:TADBP_MOUSE TAR DNA-binding protein 43 - Mus musculus (Mouse)| Length = 414 Score = 47.8 bits (112), Expect = 7e-05 Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 1/158 (0%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELD 436 ++ G+P+ TTE+++++ F FG + +Q+ + +G+ +G FV F E +K + Sbjct: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS-Q 164 Query: 437 GYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF- 613 + I R+ C++ S + P++P +VG + +++ ++L+ FF Sbjct: 165 RHMIDGRWC---DCKLPNS---------KQSPDEPLRSRKVFVGRCTEDMTAEELQQFFC 212 Query: 614 KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG 727 + + + I K R F V F DD+ + G Sbjct: 213 QYGEVVDV--FIPK---PFRAFAFVTFADDKVAQSLCG 245
>P32067:LA_MOUSE Lupus La protein homolog - Mus musculus (Mouse)| Length = 415 Score = 47.8 bits (112), Expect = 7e-05 Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 22/197 (11%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELD 436 V G P T ++I+E D G I ++Q+ R F+G F F+S + A K +E+ Sbjct: 113 VYIKGFPTDATLDDIKEWLDDKGQILNIQMRRTLHK-TFKGSIFAVFDSIQSAKKFVEIP 171 Query: 437 GYKIGNRFMRV--------------ERCRITASSKRQKKTEFQSDP--------EKPDGC 550 G K + + + ++ ++ A K +++ E + P E GC Sbjct: 172 GQKYKDTNLLILFKEDYFAKKNEERKQSKVEAKLKAKQEHEGRHKPGSTETRALEGKMGC 231 Query: 551 LSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGM 730 L + G+L +DL F S I++ +D G G + E+LEKA Sbjct: 232 LLKFSGDLDDQTCREDLHFLF--SNHGEIKW-VDFARGAKEGIILFKEKAKEALEKARNA 288 Query: 731 NQSELRGRPVKIAYAII 781 N L R K+ + ++ Sbjct: 289 NNGNLLLRNKKVTWKVL 305
>Q5XFR0:EPAB2_MOUSE Embryonic polyadenylate-binding protein 2 - Mus musculus (Mouse)| Length = 273 Score = 47.8 bits (112), Expect = 7e-05 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Frame = +2 Query: 554 SAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGM 730 S +VGN+ + S +L +F I + DK +G +G+ +++F S++ AVG+ Sbjct: 144 SVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVKAAVGL 203 Query: 731 NQSELRGRPVKI 766 ++S RGR +K+ Sbjct: 204 DESTFRGRVIKV 215
>Q09301:YQOC_CAEEL Putative RNA-binding protein EEED8.12 - Caenorhabditis elegans| Length = 197 Score = 47.4 bits (111), Expect = 9e-05 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Frame = +2 Query: 527 DPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDD 703 + +K S ++GN+ +N + +++ + FK I DK T + F +++F+D Sbjct: 53 EEQKAIDAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDS 112 Query: 704 ESLEKAVGMNQSELRGRPVKI 766 S+E A+ MN S R RP+ + Sbjct: 113 SSIENALVMNGSLFRSRPIVV 133
>Q09100:RNP24_SCHPO RNA-binding protein rnp24 - Schizosaccharomyces pombe (Fission| yeast) Length = 369 Score = 47.4 bits (111), Expect = 9e-05 Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 23/193 (11%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDR-FGPIRSLQLSRF--PDSGNFR----GLAFVTF 397 S+ K + + T E I+E+ + PI + Q++R P S R G A+V F Sbjct: 113 SFHTTKEILTDFFVRETSEMIKEVSEENIKPITTEQITRIHMPMSKEKRFQNKGFAYVDF 172 Query: 398 ESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSA------ 559 +++ +L+ + R + ++ T+F P KP LS Sbjct: 173 ATEDALKLALQCSEKALNGRNILIK-----------SNTDFSGRPSKPANTLSKTASIQS 221 Query: 560 ---------YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDES 709 +VGNL + ++ DL++ F + +I +R + TG +GF VDF D ++ Sbjct: 222 SKKEPSSILFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDT 281 Query: 710 LEKAVGMNQSELR 748 KA+ + + R Sbjct: 282 CMKAMELGHNSWR 294 Score = 38.9 bits (89), Expect = 0.033 Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 20/111 (18%) Frame = +2 Query: 494 SKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF-------------------K 616 +K +K E +S E +VGNLS++ +++ L DFF Sbjct: 86 AKYGRKEEGESQEESKRSPWGIWVGNLSFHTTKEILTDFFVRETSEMIKEVSEENIKPIT 145 Query: 617 SSRIASIRFAIDK-RTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 + +I I + K + ++GF +VDF +++L+ A+ ++ L GR + I Sbjct: 146 TEQITRIHMPMSKEKRFQNKGFAYVDFATEDALKLALQCSEKALNGRNILI 196
>Q7SYS2:MK67I_XENLA MKI67 FHA domain-interacting nucleolar phosphoprotein-like -| Xenopus laevis (African clawed frog) Length = 278 Score = 47.4 bits (111), Expect = 9e-05 Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVA-LKSL 427 G + +P + E +++E F++FG + L+LSR +GN +G A+V +E DEVA + + Sbjct: 41 GVIYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVAD 100 Query: 428 ELDGYKIGNRFMRVE 472 ++ Y R ++ E Sbjct: 101 TMNNYLFCERLLKCE 115 Score = 38.5 bits (88), Expect = 0.043 Identities = 15/50 (30%), Positives = 33/50 (66%), Gaps = 1/50 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 Y+G++ ++ E L+++F + +R + K+TG+S+G+ +V++E DE Sbjct: 44 YIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDE 93
>Q91VE6:MK67I_MOUSE MKI67 FHA domain-interacting nucleolar phosphoprotein - Mus| musculus (Mouse) Length = 317 Score = 47.0 bits (110), Expect = 1e-04 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVA-LKSL 427 G V +P T +E I +FG I +LSR +GN +G AFV FES++VA + + Sbjct: 47 GVVYLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAE 106 Query: 428 ELDGYKIGNRFM 463 +D Y G R + Sbjct: 107 TMDNYLFGERLL 118 Score = 34.3 bits (77), Expect = 0.81 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +2 Query: 482 ITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKR 658 +T R KK + + + G + Y+G+L +SE + ++ I+ R + KR Sbjct: 26 LTQIQGRTKKPQQKKKEKLNRGVV--YLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKR 83 Query: 659 TGDSRGFCHVDFEDDE 706 TG+S+G+ V+FE ++ Sbjct: 84 TGNSKGYAFVEFESED 99
>Q05966:GRP10_BRANA Glycine-rich RNA-binding protein 10 - Brassica napus (Rape)| Length = 169 Score = 47.0 bits (110), Expect = 1e-04 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDL-RDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG-MN 733 +VG L+W + +L R F + + + D+ TG SRGF V F+D++S++ A+ MN Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68 Query: 734 QSELRGRPVKI 766 EL GR + + Sbjct: 69 GKELDGRTITV 79 Score = 37.4 bits (85), Expect = 0.096 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Frame = +2 Query: 242 YECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALK 421 Y C G+ + T + E+ F +FG + ++ ++G RG FVTF+ DE ++K Sbjct: 6 YRC---FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFK-DEKSMK 61 Query: 422 SL--ELDGYKIGNRFMRVERCR 481 E++G ++ R + V + Sbjct: 62 DAIDEMNGKELDGRTITVNEAQ 83
>Q8ITY4:PM14_CAEEL Pre-mRNA branch site p14-like protein - Caenorhabditis elegans| Length = 138 Score = 46.6 bits (109), Expect = 2e-04 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYKI 448 +PY T EE+ E+F +FG +R + R ++ RG AFV +E A + E L GY + Sbjct: 26 LPYKITTEEMYEIFGKFGAVRQI---RVGNTAETRGTAFVVYEDIFDAKTACEHLSGYNV 82 Query: 449 GNRFMRVERCRITASSKR 502 NR++ V + T + KR Sbjct: 83 SNRYLVVLYYQATKAWKR 100
>Q5AHI7:NOP12_CANAL Nucleolar protein 12 - Candida albicans (Yeast)| Length = 454 Score = 46.6 bits (109), Expect = 2e-04 Identities = 47/197 (23%), Positives = 76/197 (38%), Gaps = 19/197 (9%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G V A + + + LF +G I DS +R ++F +VA Sbjct: 164 GNVPADVITSKIIAKNFKNLFKHYGKI---------DSIRYRSISFDEHLPRKVAFAKKN 214 Query: 431 LDG----------YKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSW 580 L YK + + T + + S P D + +VGNL + Sbjct: 215 LHKSRDSVNAYIVYKEKPASIAAKELNATVFEDHHLRVDHVSHPAPKDNKRTIFVGNLDF 274 Query: 581 NISEKDLRDFFKSSR---IASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSEL-- 745 E+ L +F S + S+R D +T +GF V F+D S+ KA+ +N L Sbjct: 275 EEKEETLWKYFNSKLDQDVESVRIIRDSKTNLGKGFALVQFKDTLSVNKALLLNDKPLET 334 Query: 746 ----RGRPVKIAYAIIN 784 +GR ++I+ A N Sbjct: 335 GTQKKGRKLRISRAKSN 351
>Q8C7E9:CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant - Mus| musculus (Mouse) Length = 632 Score = 46.6 bits (109), Expect = 2e-04 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = +2 Query: 527 DPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDD 703 DP S +VGN+ + +E+ L+D F + S R D+ TG +G+ +++D Sbjct: 8 DPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQ 67 Query: 704 ESLEKAV-GMNQSELRGRPVKI 766 E+ A+ +N E GR +++ Sbjct: 68 ETALSAMRNLNGREFSGRALRV 89 Score = 46.2 bits (108), Expect = 2e-04 Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-EL 433 V +PY TEE+++++F G + S +L ++G +G F ++ E AL ++ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKP 541 +G + R +RV+ A+S++ K+ P P Sbjct: 78 NGREFSGRALRVD----NAASEKNKEELKSLGPAAP 109
>Q9H0L4:CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit, tau variant - Homo| sapiens (Human) Length = 616 Score = 46.6 bits (109), Expect = 2e-04 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = +2 Query: 527 DPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDD 703 DP S +VGN+ + +E+ L+D F + S R D+ TG +G+ +++D Sbjct: 8 DPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQ 67 Query: 704 ESLEKAV-GMNQSELRGRPVKI 766 E+ A+ +N E GR +++ Sbjct: 68 ETALSAMRNLNGREFSGRALRV 89 Score = 46.2 bits (108), Expect = 2e-04 Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-EL 433 V +PY TEE+++++F G + S +L ++G +G F ++ E AL ++ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKP 541 +G + R +RV+ A+S++ K+ P P Sbjct: 78 NGREFSGRALRVD----NAASEKNKEELKSLGPAAP 109
>Q8R0F5:RBMX2_MOUSE RNA-binding motif protein, X-linked 2 - Mus musculus (Mouse)| Length = 326 Score = 46.2 bits (108), Expect = 2e-04 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 +VG L + ++E D+ F I +I DK+TG S+GFC + +ED S AV N Sbjct: 39 FVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFN 98 Query: 734 QSELRGRPVKIAYAIINRA 790 +++GR +++ + RA Sbjct: 99 GIKIKGRTIRVDHVSNYRA 117
>Q57014:RBPA_SYNY3 Putative RNA-binding protein rbpA - Synechocystis sp. (strain PCC| 6803) Length = 101 Score = 45.8 bits (107), Expect = 3e-04 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +2 Query: 551 LSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV- 724 +S YVGNLS+++SE DL F + + ++ D+ TG RGF V+ E D A+ Sbjct: 1 MSIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIE 60 Query: 725 GMNQSELRGRPVKI 766 ++ +E GR +K+ Sbjct: 61 ALDGAEWMGRDLKV 74
>P53883:NOP13_YEAST Nucleolar protein 13 - Saccharomyces cerevisiae (Baker's yeast)| Length = 403 Score = 45.8 bits (107), Expect = 3e-04 Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 2/135 (1%) Frame = +2 Query: 374 RGLAFVTFESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCL 553 +G ++ F++ E LEL + R M ++ S R K + + + P + Sbjct: 183 KGFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSE--NYSGRPDKDDLVAMSKNPPSRI 240 Query: 554 SAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDE-SLEKAVG 727 +VGNLS+++++ LR F+ I IR A + +G +GF +DF+++E S + Sbjct: 241 -LFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNELKD 299 Query: 728 MNQSELRGRPVKIAY 772 + ++ GRP+++ Y Sbjct: 300 KSCRKIAGRPLRMEY 314 Score = 41.2 bits (95), Expect = 0.007 Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKI 448 + + T++ +R+ F G I ++++ F DSG +G AF+ F+++E + L + KI Sbjct: 246 LSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNELKDKSCRKI 305 Query: 449 GNRFMRVERCRITASSKRQKKTE 517 R +R+E + + +KK E Sbjct: 306 AGRPLRMEYGEDRSKRQVRKKVE 328 Score = 33.1 bits (74), Expect = 1.8 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 18/96 (18%) Frame = +2 Query: 533 EKPDGCLSAYVGNLSWNISEKDLRDFFKS-----------------SRIASIRFAIDKRT 661 +K + ++GNLS++ ++ DL FF + +R++ R A Sbjct: 119 KKDENKYGVWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAAKNSN 178 Query: 662 G-DSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 ++GFC++ F++ E ++ + +++S L GR + I Sbjct: 179 AMKNKGFCYMFFKNVEQMKAVLELSESHLNGRNMLI 214
>Q09167:SFRS5_RAT Splicing factor, arginine/serine-rich 5 - Rattus norvegicus (Rat)| Length = 269 Score = 45.4 bits (106), Expect = 4e-04 Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 15/174 (8%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFMR 466 E+++ F +G IR + L R G FV FE A ++ ELDG ++ + + Sbjct: 17 EKDVERFFKGYGRIRDIDLKR--------GFGFVEFEDPRDADDAVYELDGKELCSERVT 68 Query: 467 VERCRITA-------------SSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 +E R + SS+R + + P + + L V NLS +S +DL+D Sbjct: 69 IEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRL--IVENLSSRVSWQDLKD 126 Query: 608 FFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKI 766 F + + + FA R + G V+F L+ A+ ++ E+ GR +K+ Sbjct: 127 FMRQA--GEVTFADAHRPKLNEGV--VEFASYGDLKNAIEKLSGKEINGRKIKL 176 Score = 30.8 bits (68), Expect = 8.9 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Frame = +2 Query: 545 GCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA 721 GC ++G L+ EKD+ FFK RI I RGF V+FED + A Sbjct: 3 GC-RVFIGRLNPAAREKDVERFFKGYGRIRDIDL--------KRGFGFVEFEDPRDADDA 53 Query: 722 V-GMNQSELRGRPVKIAYA 775 V ++ EL V I +A Sbjct: 54 VYELDGKELCSERVTIEHA 72
>Q13243:SFRS5_HUMAN Splicing factor, arginine/serine-rich 5 - Homo sapiens (Human)| Length = 272 Score = 45.4 bits (106), Expect = 4e-04 Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 15/174 (8%) Frame = +2 Query: 290 EEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKIGNRFMR 466 E+++ F +G IR + L R G FV FE A ++ ELDG ++ + + Sbjct: 17 EKDVERFFKGYGRIRDIDLKR--------GFGFVEFEDPRDADDAVYELDGKELCSERVT 68 Query: 467 VERCRITA-------------SSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRD 607 +E R + SS+R + + P + + L V NLS +S +DL+D Sbjct: 69 IEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRL--IVENLSSRVSWQDLKD 126 Query: 608 FFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKI 766 F + + + FA R + G V+F L+ A+ ++ E+ GR +K+ Sbjct: 127 FMRQA--GEVTFADAHRPKLNEGV--VEFASYGDLKNAIEKLSGKEINGRKIKL 176 Score = 30.8 bits (68), Expect = 8.9 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Frame = +2 Query: 545 GCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKA 721 GC ++G L+ EKD+ FFK RI I RGF V+FED + A Sbjct: 3 GC-RVFIGRLNPAAREKDVERFFKGYGRIRDIDL--------KRGFGFVEFEDPRDADDA 53 Query: 722 V-GMNQSELRGRPVKIAYA 775 V ++ EL V I +A Sbjct: 54 VYELDGKELCSERVTIEHA 72
>Q9BYG3:MK67I_HUMAN MKI67 FHA domain-interacting nucleolar phosphoprotein - Homo| sapiens (Human) Length = 293 Score = 45.4 bits (106), Expect = 4e-04 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVA-LKSL 427 G V +P E +I F +FG + +LSR +GN +G AFV FES++VA + + Sbjct: 45 GVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAE 104 Query: 428 ELDGYKIGNRFM 463 ++ Y G R + Sbjct: 105 TMNNYLFGERLL 116 Score = 31.2 bits (69), Expect = 6.8 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 YV +L + E + +F + R + KRTG+S+G+ V+FE ++ Sbjct: 48 YVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESED 97
>O42923:CIP1_SCHPO RNA-binding post-transcriptional regulator cip1 -| Schizosaccharomyces pombe (Fission yeast) Length = 490 Score = 45.4 bits (106), Expect = 4e-04 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 +V +P++ ++ + + F + G R + D+G FRGLAF F E A ++ L Sbjct: 204 IVVKNIPFSLEKDTLLDHFKQLGIPRPYAFNYHYDNGIFRGLAFANFYRPEEAQVVVQTL 263 Query: 434 DGYKIGNRFMRVERCRITASSKRQK 508 +GY+I R +RVE R +++R+K Sbjct: 264 NGYEINGRRLRVEWKRQLPAAEREK 288
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 45.1 bits (105), Expect = 5e-04 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S E GK+ G+ + T E+ + + F FGPI + + + ++ RG F+TF + E A Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61 Query: 419 KSLE-LDGYKIGNRFMRVERCRITASSKR 502 ++ ++G + R +RV+ +A R Sbjct: 62 DAMRAMNGESLDGRQIRVDHAGKSARGSR 90
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 45.1 bits (105), Expect = 5e-04 Identities = 34/158 (21%), Positives = 73/158 (46%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G + + + + + + F FG I S +++ SG +G FV + ++E A K++E Sbjct: 124 GNIFIKNLDESIDHKALHDTFSSFGNIVSCKVA-VDSSGQSKGYGFVQYANEESAQKAIE 182 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDF 610 K+ + ++ + +RQ++ + + + YV NL+ + ++ DL++ Sbjct: 183 ----KLNGMLLNDKQVYVGPFLRRQERDSTANKTK----FTNVYVKNLAESTTDDDLKNA 234 Query: 611 FKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 F + + G S+GF V+FE+ + +AV Sbjct: 235 FGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAV 272 Score = 43.9 bits (102), Expect = 0.001 Identities = 35/153 (22%), Positives = 73/153 (47%), Gaps = 2/153 (1%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSL-ELDGYKI 448 + + T+ ++ + F + G + ++++ R + G +V F + + A +++ EL+ + Sbjct: 43 LDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPL 102 Query: 449 GNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SR 625 + +RV S +R G + ++ NL +I K L D F S Sbjct: 103 YGKPIRVMYSHRDPSVRRS-------------GAGNIFIKNLDESIDHKALHDTFSSFGN 149 Query: 626 IASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV 724 I S + A+D +G S+G+ V + ++ES +KA+ Sbjct: 150 IVSCKVAVDS-SGQSKGYGFVQYANEESAQKAI 181
>O13620:MRD1_SCHPO Multiple RNA-binding domain-containing protein 1 -| Schizosaccharomyces pombe (Fission yeast) Length = 833 Score = 45.1 bits (105), Expect = 5e-04 Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 9/126 (7%) Frame = +2 Query: 404 DEVALKSLELDGYKIGNRFMRVERC---RITASSKRQKKTEFQSDPEKPDGCLSA----Y 562 +EV++ EL + N +ER +I +S QK S+ E+ +S + Sbjct: 267 EEVSVVGDELKSFDKENNDEHLERVTNDKIADASMLQKAENNVSEQERNIQLISETKRLF 326 Query: 563 VGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFED-DESLEKAVGMNQ 736 + NL+++ +E DL+ F ++ + IDK+T + +GF ++DF D D+++ + ++ Sbjct: 327 LRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAYLELDA 386 Query: 737 SELRGR 754 +GR Sbjct: 387 KPFQGR 392 Score = 36.6 bits (83), Expect = 0.16 Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 23/193 (11%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELD 436 ++ PY T+ EE+ LF FG + + + P +G + F+ A L Sbjct: 508 LLVKNFPYGTSAEELTSLFSPFGELGRILI---PPAGTIAIIEFLNAPDCRQAFSKLAYT 564 Query: 437 GYKIGNRFM-RVERCRITASSKRQKKTEFQSDPEKPDGCLS---------------AYVG 568 K ++ + R T S K+ K E + S YV Sbjct: 565 RIKSSILYLEKAPRDVFTTSFKQSGKPELAQKVNAVEATTSEKVGTEDIESLDTATIYVK 624 Query: 569 NLSWNISEKDLRDFFKSSR---IASIRFAID-KRTGD--SRGFCHVDFEDDESLEKAV-G 727 NL+++ +++ + FK A IR D KR G S GF V+F+D S A+ Sbjct: 625 NLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDKASAVAAMHA 684 Query: 728 MNQSELRGRPVKI 766 MN L G ++I Sbjct: 685 MNGFVLDGHKLEI 697
>Q8JIY8:MK67I_DANRE MKI67 FHA domain-interacting nucleolar phosphoprotein-like - Danio| rerio (Zebrafish) (Brachydanio rerio) Length = 269 Score = 45.1 bits (105), Expect = 5e-04 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVA-LKSL 427 G + +P E +++ F++FG + L++SR +G +G FV FE DEVA + + Sbjct: 45 GVLYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAE 104 Query: 428 ELDGYKIGNRFMRVERCRITASSKRQKK 511 ++ Y +G R + +C + K +K Sbjct: 105 TMNNYLMGERII---KCHVIPPEKVHEK 129 Score = 37.7 bits (86), Expect = 0.073 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 YVG+L + E L+ +F+ ++ +R + K+TG S+G+ V+FE DE Sbjct: 48 YVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDE 97
>P05455:LA_HUMAN Lupus La protein - Homo sapiens (Human)| Length = 408 Score = 45.1 bits (105), Expect = 5e-04 Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 23/198 (11%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELD 436 V G P T ++I+E + G + ++Q+ R F+G FV F+S E A K +E Sbjct: 113 VYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKA-FKGSIFVVFDSIESAKKFVETP 171 Query: 437 GYKI------------------GNRFMRVERCRITASSKRQKKTEFQSDPEKPD-----G 547 G K R ++ A +++ K + + D E G Sbjct: 172 GQKYKETDLLILFKDDYFAKKNEERKQNKVEAKLRAKQEQEAKQKLEEDAEMKSLEEKIG 231 Query: 548 CLSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG 727 CL + G+L +DL F S I++ ID G G + E+L KA Sbjct: 232 CLLKFSGDLDDQTCREDLHILF--SNHGEIKW-IDFVRGAKEGIILFKEKAKEALGKAKD 288 Query: 728 MNQSELRGRPVKIAYAII 781 N L+ R ++ + ++ Sbjct: 289 ANNGNLQLRNKEVTWEVL 306
>Q8VHV7:HNRH1_RAT Heterogeneous nuclear ribonucleoprotein H - Rattus norvegicus (Rat)| Length = 449 Score = 45.1 bits (105), Expect = 5e-04 Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 6/176 (3%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRF--PDSGNFRGLAFVTFESDEVALKSLE 430 V G+P++ + +E++ F Q RF G G AFV ES++ +L+ Sbjct: 13 VKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALK 72 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYV--GNLSWNISEKDLR 604 D +G+R++ V + K T P PD +V L + SE+++ Sbjct: 73 KDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGFVRLRGLPFGCSEEEIV 128 Query: 605 DFFKSSRIA--SIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 FF I I +D + G S G V F E EKA+ ++ + R ++I Sbjct: 129 QFFSGLEIVPNGITLPVDFQ-GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEI 183 Score = 38.9 bits (89), Expect = 0.033 Identities = 28/96 (29%), Positives = 48/96 (50%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G V G+P+ +EEEI + F + + G G AFV F S E+A K+L+ Sbjct: 111 GFVRLRGLPFGCSEEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALK 170 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEK 538 +IG+R++ + + SS+ + +T + DP + Sbjct: 171 KHKERIGHRYIEIFK-----SSRAEVRTHY--DPPR 199 Score = 34.3 bits (77), Expect = 0.81 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKI 448 G+PY TE +I F P+R + + PD G G A V F + E A+ ++ D + Sbjct: 295 GLPYRATENDIYNFFSPLNPVR-VHIETGPD-GRVTGEADVEFATHEDAVAAMSKDKANM 352 Query: 449 GNRFMRV 469 +R++ + Sbjct: 353 QHRYVEL 359
>Q03251:GRP8_ARATH Glycine-rich RNA-binding protein 8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 169 Score = 45.1 bits (105), Expect = 5e-04 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDL-RDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 +VG L+W +++DL R F + + + D+ +G SRGF V F+D++++ A+ MN Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68 Query: 734 QSELRGRPVKI 766 EL GR + + Sbjct: 69 GKELDGRVITV 79 Score = 41.6 bits (96), Expect = 0.005 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%) Frame = +2 Query: 242 YECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALK 421 Y C G+ + T +E+++ F +FG + ++ +SG RG FVTF+ DE A++ Sbjct: 6 YRC---FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFK-DEKAMR 61 Query: 422 SL--ELDGYKIGNRFMRVERCRITAS 493 E++G ++ R + V + S Sbjct: 62 DAIEEMNGKELDGRVITVNEAQSRGS 87
>Q9Y388:RBMX2_HUMAN RNA-binding motif protein, X-linked 2 - Homo sapiens (Human)| Length = 322 Score = 44.7 bits (104), Expect = 6e-04 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 ++G L + ++E D+ F I +I DK+TG S+GFC + +ED S AV N Sbjct: 39 FLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFN 98 Query: 734 QSELRGRPVKIAYAIINRA 790 +++GR +++ + RA Sbjct: 99 GIKIKGRTIRVDHVSNYRA 117
>P28048:LAA_XENLA Lupus La protein homolog A - Xenopus laevis (African clawed frog)| Length = 428 Score = 44.7 bits (104), Expect = 6e-04 Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 25/194 (12%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELD 436 V G P + ++++E GPI ++Q+ R F+G F+ F +D+ A K LE Sbjct: 113 VYIKGFPTSAILDDVKEWLKDKGPIENIQMRRTLQR-EFKGSIFIIFNTDDDAKKFLENR 171 Query: 437 GYKIGNRFMRV-----------ERCRITASSKRQKKTEFQSDPEKPD------------G 547 K + M V E ++ S ++ K + + + +K G Sbjct: 172 NLKYKDNDMTVLSREEYHAKKNEERKLNKSEEKAKSKQVKKEAQKQAEDAERKLVEERVG 231 Query: 548 CLSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG 727 L + G+L S +DL F++ I + ID G G E+L+KA Sbjct: 232 SLLKFSGDLDNMTSREDLHALFQTH--GDIEW-IDFSRGAKEGIVLFKMNAKEALDKAKA 288 Query: 728 MNQS--ELRGRPVK 763 N +L+G+ VK Sbjct: 289 ANSDNLKLKGKDVK 302
>Q04067:IF34_YEAST Eukaryotic translation initiation factor 3 RNA-binding subunit -| Saccharomyces cerevisiae (Baker's yeast) Length = 274 Score = 44.7 bits (104), Expect = 6e-04 Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%) Frame = +2 Query: 305 ELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYKIGNRFMRVE 472 EL F PI + + R ++G RGLAFVTF S+EVA ++L LDG N +RVE Sbjct: 210 ELLFPFAPIPRVSVVRNKETGKSRGLAFVTFSSEEVAEQALRFLDGRGYMNLILRVE 266
>P10979:GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein - Zea| mays (Maize) Length = 157 Score = 44.7 bits (104), Expect = 6e-04 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 +VG L+W S + L + F S I + D+ TG SRGF V F + S+ A+ MN Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70 Query: 734 QSELRGRPVKIAYA 775 EL GR + + A Sbjct: 71 GKELDGRNITVNQA 84
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 44.3 bits (103), Expect = 8e-04 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVAL 418 S E GK+ G+ + T E+ + + F FGPI + + + ++ RG F+TF + E A Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61 Query: 419 KSLE-LDGYKIGNRFMRVERCRITASSKR 502 ++ ++G + R +RV+ +A R Sbjct: 62 VAMRAMNGESLDGRQIRVDHAGKSARGTR 90
>Q9CXG3:PPIL4_MOUSE Peptidyl-prolyl cis-trans isomerase-like 4 - Mus musculus (Mouse)| Length = 492 Score = 44.3 bits (103), Expect = 8e-04 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 10/96 (10%) Frame = +2 Query: 284 TTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS-LELDGYKIGNRF 460 TT+E++ +F RFGPIRS ++ R +G AF+ FE +E K+ ++D I +R Sbjct: 251 TTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKMDNVLIDDRR 310 Query: 461 MRVERCRITASSKRQKK---------TEFQSDPEKP 541 + V+ + A K + K E++ + +KP Sbjct: 311 IHVDFSQSVAKVKWKGKGGKYTKSDFKEYEKEQDKP 346
>Q8WUA2:PPIL4_HUMAN Peptidyl-prolyl cis-trans isomerase-like 4 - Homo sapiens (Human)| Length = 492 Score = 44.3 bits (103), Expect = 8e-04 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 10/96 (10%) Frame = +2 Query: 284 TTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKS-LELDGYKIGNRF 460 TT+E++ +F RFGPIRS ++ R +G AF+ FE +E K+ ++D I +R Sbjct: 251 TTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKMDNVLIDDRR 310 Query: 461 MRVERCRITASSKRQKK---------TEFQSDPEKP 541 + V+ + A K + K E++ + +KP Sbjct: 311 IHVDFSQSVAKVKWKGKGGKYTKSDFKEYEKEQDKP 346
>P59708:PM14_MOUSE Pre-mRNA branch site protein p14 - Mus musculus (Mouse)| Length = 125 Score = 44.3 bits (103), Expect = 8e-04 Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYKI 448 +PY T EE+ ++F ++GPIR +++ P++ RG A+V +E A + + L G+ + Sbjct: 26 LPYKITAEEMYDIFGKYGPIRQIRVGNTPET---RGTAYVVYEDIFDAKNACDHLSGFNV 82 Query: 449 GNRFMRV 469 NR++ V Sbjct: 83 CNRYLVV 89
>Q9Y3B4:PM14_HUMAN Pre-mRNA branch site protein p14 - Homo sapiens (Human)| Length = 125 Score = 44.3 bits (103), Expect = 8e-04 Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYKI 448 +PY T EE+ ++F ++GPIR +++ P++ RG A+V +E A + + L G+ + Sbjct: 26 LPYKITAEEMYDIFGKYGPIRQIRVGNTPET---RGTAYVVYEDIFDAKNACDHLSGFNV 82 Query: 449 GNRFMRV 469 NR++ V Sbjct: 83 CNRYLVV 89
>Q03250:GRP7_ARATH Glycine-rich RNA-binding protein 7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 176 Score = 44.3 bits (103), Expect = 8e-04 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 +VG L+W ++ L F + + D+ TG SRGF V F+D+++++ A+ GMN Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70 Query: 734 QSELRGRPVKI 766 +L GR + + Sbjct: 71 GQDLDGRSITV 81
>Q18409:RSP6_CAEEL Probable splicing factor, arginine/serine-rich 6 - Caenorhabditis| elegans Length = 179 Score = 43.9 bits (102), Expect = 0.001 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE- 430 KV G+P T +E+ E+FDRFG IR + ++R P G AFV ++ A ++ Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP-----GFAFVEYDDVRDAEDAVRA 58 Query: 431 LDGYKIGNRFMRVE 472 LDG +I RVE Sbjct: 59 LDGSRICGVRARVE 72
>Q9WX39:RBPF_ANASP Putative RNA-binding protein rbpF - Anabaena sp. (strain PCC 7120)| Length = 105 Score = 43.9 bits (102), Expect = 0.001 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +2 Query: 551 LSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV- 724 +S YVGNLS+ ++++D+ + F + + + D+ TG RGF V+ D A+ Sbjct: 1 MSIYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIE 60 Query: 725 GMNQSELRGRPVKI 766 G++ +E GR +K+ Sbjct: 61 GLDGAEWMGRDLKV 74 Score = 40.4 bits (93), Expect = 0.011 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 + + Y T+E+I +F +G ++ + L ++G RG AFV SD ++E L Sbjct: 3 IYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEGL 62 Query: 434 DGYKIGNRFMRVERCR 481 DG + R ++V + + Sbjct: 63 DGAEWMGRDLKVNKAK 78
>Q9WX37:RBPE_ANASP Putative RNA-binding protein rbpE - Anabaena sp. (strain PCC 7120)| Length = 99 Score = 43.9 bits (102), Expect = 0.001 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +2 Query: 551 LSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV- 724 +S YVGNLS+++++ DL F + ++ D+ TG RGF V+ E + + A+ Sbjct: 1 MSIYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQ 60 Query: 725 GMNQSELRGRPVKI 766 ++ +E GR +K+ Sbjct: 61 ALDGAEWMGRVLKV 74
>Q44556:RBPD_ANASP Putative RNA-binding protein rbpD - Anabaena sp. (strain PCC 7120)| Length = 94 Score = 43.9 bits (102), Expect = 0.001 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Frame = +2 Query: 551 LSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV- 724 ++ YVGNLS+ +E DL+ F + + D+ TG RGF V+ +D + A+ Sbjct: 1 MTIYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAIT 60 Query: 725 GMNQSELRGRPVKIAYAIINRA*RLSSW 808 ++ +E GR +++ A R SW Sbjct: 61 ELDGAEWMGRQLRVNKAKPREDDRRGSW 88
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 43.9 bits (102), Expect = 0.001 Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSL 427 GK+ G+ + T E+ + ++F ++G I + + + ++ RG FVTFE+ D+ + Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65 Query: 428 ELDGYKIGNRFMRVER 475 ++G + R +RV++ Sbjct: 66 AMNGKSVDGRQIRVDQ 81 Score = 41.2 bits (95), Expect = 0.007 Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFED-DESLEKAVGMN 733 +VG LS++ +E+ L F K +I+ + D+ T SRGF V FE+ D++ + + MN Sbjct: 9 FVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMN 68 Query: 734 QSELRGRPVKIAYA 775 + GR +++ A Sbjct: 69 GKSVDGRQIRVDQA 82
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 43.9 bits (102), Expect = 0.001 Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSL 427 GK+ G+ + T E+ + ++F ++G I + + + ++ RG FVTFE+ D+ + Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65 Query: 428 ELDGYKIGNRFMRVER 475 ++G + R +RV++ Sbjct: 66 AMNGKSVDGRQIRVDQ 81 Score = 41.2 bits (95), Expect = 0.007 Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFED-DESLEKAVGMN 733 +VG LS++ +E+ L F K +I+ + D+ T SRGF V FE+ D++ + + MN Sbjct: 9 FVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMN 68 Query: 734 QSELRGRPVKIAYA 775 + GR +++ A Sbjct: 69 GKSVDGRQIRVDQA 82
>O35737:HNRH1_MOUSE Heterogeneous nuclear ribonucleoprotein H - Mus musculus (Mouse)| Length = 449 Score = 43.5 bits (101), Expect = 0.001 Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 6/176 (3%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRF--PDSGNFRGLAFVTFESDEVALKSLE 430 V G+P++ + +E++ F Q RF G G AFV ES++ +L+ Sbjct: 13 VKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALK 72 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYV--GNLSWNISEKDLR 604 D +G+R++ V + K T P PD +V L + S++++ Sbjct: 73 KDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGFVRLRGLPFGCSKEEIV 128 Query: 605 DFFKSSRIA--SIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 FF I I +D + G S G V F E EKA+ ++ + R ++I Sbjct: 129 QFFSGLEIVPNGITLPVDFQ-GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEI 183 Score = 37.4 bits (85), Expect = 0.096 Identities = 27/96 (28%), Positives = 48/96 (50%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G V G+P+ ++EEI + F + + G G AFV F S E+A K+L+ Sbjct: 111 GFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALK 170 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEK 538 +IG+R++ + + SS+ + +T + DP + Sbjct: 171 KHKERIGHRYIEIFK-----SSRAEVRTHY--DPPR 199 Score = 33.5 bits (75), Expect = 1.4 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKI 448 G+PY TE +I F P+R + + PD G G A V F + E A+ ++ D + Sbjct: 295 GLPYRATENDIYNFFSPLNPVR-VHIEIGPD-GRVTGEADVEFATHEDAVAAMSKDKANM 352 Query: 449 GNRFMRV 469 +R++ + Sbjct: 353 QHRYVEL 359
>P31943:HNRH1_HUMAN Heterogeneous nuclear ribonucleoprotein H - Homo sapiens (Human)| Length = 449 Score = 43.5 bits (101), Expect = 0.001 Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 6/176 (3%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRF--PDSGNFRGLAFVTFESDEVALKSLE 430 V G+P++ + +E++ F Q RF G G AFV ES++ +L+ Sbjct: 13 VKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALK 72 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYV--GNLSWNISEKDLR 604 D +G+R++ V + K T P PD +V L + S++++ Sbjct: 73 KDRETMGHRYVEVFKSNNVEMDWVLKHT----GPNSPDTANDGFVRLRGLPFGCSKEEIV 128 Query: 605 DFFKSSRIA--SIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 FF I I +D + G S G V F E EKA+ ++ + R ++I Sbjct: 129 QFFSGLEIVPNGITLPVDFQ-GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEI 183 Score = 37.4 bits (85), Expect = 0.096 Identities = 27/96 (28%), Positives = 48/96 (50%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G V G+P+ ++EEI + F + + G G AFV F S E+A K+L+ Sbjct: 111 GFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALK 170 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEK 538 +IG+R++ + + SS+ + +T + DP + Sbjct: 171 KHKERIGHRYIEIFK-----SSRAEVRTHY--DPPR 199 Score = 33.5 bits (75), Expect = 1.4 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKI 448 G+PY TE +I F P+R + + PD G G A V F + E A+ ++ D + Sbjct: 295 GLPYRATENDIYNFFSPLNPVR-VHIEIGPD-GRVTGEADVEFATHEDAVAAMSKDKANM 352 Query: 449 GNRFMRV 469 +R++ + Sbjct: 353 QHRYVEL 359
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 43.5 bits (101), Expect = 0.001 Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSL 427 GK+ G+ + T E+ + ++F ++G I + + + ++ RG FVTFE+ D+ + Sbjct: 6 GKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65 Query: 428 ELDGYKIGNRFMRVER 475 ++G + R +RV++ Sbjct: 66 AMNGKSVDGRQIRVDQ 81 Score = 40.4 bits (93), Expect = 0.011 Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFED-DESLEKAVGMN 733 +VG LS++ +E+ L F K +I+ + D+ T SRGF V FE+ D++ + + MN Sbjct: 9 FVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMN 68 Query: 734 QSELRGRPVKIAYA 775 + GR +++ A Sbjct: 69 GKSVDGRQIRVDQA 82
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 43.5 bits (101), Expect = 0.001 Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSL 427 GK+ G+ + T E+ + ++F ++G I + + + ++ RG FVTFE+ D+ + Sbjct: 6 GKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65 Query: 428 ELDGYKIGNRFMRVER 475 ++G + R +RV++ Sbjct: 66 AMNGKSVDGRQIRVDQ 81 Score = 40.4 bits (93), Expect = 0.011 Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFED-DESLEKAVGMN 733 +VG LS++ +E+ L F K +I+ + D+ T SRGF V FE+ D++ + + MN Sbjct: 9 FVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMN 68 Query: 734 QSELRGRPVKIAYA 775 + GR +++ A Sbjct: 69 GKSVDGRQIRVDQA 82
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 43.5 bits (101), Expect = 0.001 Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSL 427 GK+ G+ + T E+ + ++F ++G I + + + ++ RG FVTFE+ D+ + Sbjct: 6 GKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65 Query: 428 ELDGYKIGNRFMRVER 475 ++G + R +RV++ Sbjct: 66 AMNGKSVDGRQIRVDQ 81 Score = 40.4 bits (93), Expect = 0.011 Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFED-DESLEKAVGMN 733 +VG LS++ +E+ L F K +I+ + D+ T SRGF V FE+ D++ + + MN Sbjct: 9 FVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMN 68 Query: 734 QSELRGRPVKIAYA 775 + GR +++ A Sbjct: 69 GKSVDGRQIRVDQA 82
>Q09868:CIP2_SCHPO RNA-binding post-transcriptional regulator cip2 -| Schizosaccharomyces pombe (Fission yeast) Length = 576 Score = 43.5 bits (101), Expect = 0.001 Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 6/123 (4%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-L 433 +V +P++ +E + ++F R + D+G FRGLAF F S E A ++ L Sbjct: 234 IVIKNIPFSLKKEVLFKVFTALDIPRPYAFNYHFDNGVFRGLAFANFHSPEEAKTVVQVL 293 Query: 434 DGYKIGNRFMRVERCRITASSKRQK----KTEFQSDPEKPDGCLSAY-VGNLSWNISEKD 598 +GY+I R +RVE R ++R++ K E ++ E+ + S + V N+ I + D Sbjct: 294 NGYEITGRRLRVEWKRQLPPAERERVERGKQEKRAVEERKNQLKSPFSVANIGAGI-DFD 352 Query: 599 LRD 607 L D Sbjct: 353 LND 355
>Q9VRV7:PM14_DROME Pre-mRNA branch site p14-like protein - Drosophila melanogaster| (Fruit fly) Length = 121 Score = 43.1 bits (100), Expect = 0.002 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYKI 448 +PY T +E+ ++F +FG IR +++ P++ RG AFV +E A + + L G+ + Sbjct: 22 LPYKITSDEMYDIFGKFGAIRQIRVGNTPET---RGTAFVVYEDIFDAKNACDHLSGFNV 78 Query: 449 GNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAY 562 NR++ V S+K K+ + E+ + + Y Sbjct: 79 CNRYLVV---LYYQSNKAFKRVDMDKKQEELNNIKAKY 113
>Q6BTS9:NOP12_DEBHA Nucleolar protein 12 - Debaryomyces hansenii (Yeast) (Torulaspora| hansenii) Length = 462 Score = 43.1 bits (100), Expect = 0.002 Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 14/179 (7%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAF-------VTFESDE 409 G V AS + ++ ++LF ++G I+S++ FR ++F V F + Sbjct: 164 GNVNASVVGSKPMYKKFKKLFSQYGKIQSIR---------FRSISFDDAVPRKVAFAKKK 214 Query: 410 VALKSLELDGYKIGNR----FMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLS 577 + L+ Y + V + T + + + P D + +VGNL Sbjct: 215 LHSSRDTLNAYVVFAEKEPSLKCVPKLNATEFEHAHLRVDHVAHPAPKDNKRTIFVGNLD 274 Query: 578 WNISEKDLRDFFKSSR---IASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSEL 745 + E+ L +F S + S+R D +T +GF V F+D S+ K++ +N + Sbjct: 275 FEEKEETLWRYFNSKTDNDVESVRVIRDAKTNVGKGFALVQFKDTLSVNKSLLLNDKPM 333
>O02008:TRA2_DROVI Transformer-2 sex-determining protein - Drosophila virilis (Fruit| fly) Length = 272 Score = 42.7 bits (99), Expect = 0.002 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSLELDGYK 445 G+ TT++++RELF++FGPI +Q+ + RG F+ FE+ + + G + Sbjct: 111 GLNTNTTQQKVRELFNKFGPIERIQMVIDAHTHRSRGFCFIYFENLGDARVAKDACTGME 170 Query: 446 IGNRFMRVERCRITASSKRQKKTEFQSDPEKPDG 547 + R +RV+ IT + + P +P G Sbjct: 171 VDGRRIRVD-YSITQRAHTPTPGVYMGRPSRPLG 203 Score = 42.4 bits (98), Expect = 0.003 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 5/105 (4%) Frame = +2 Query: 491 SSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGD 667 S RQ+ + + P+ C+ + L+ N +++ +R+ F K I I+ ID T Sbjct: 88 SRDRQRMRQARDHPQA-SRCIGVF--GLNTNTTQQKVRELFNKFGPIERIQMVIDAHTHR 144 Query: 668 SRGFCHVDFED--DESLEK--AVGMNQSELRGRPVKIAYAIINRA 790 SRGFC + FE+ D + K GM E+ GR +++ Y+I RA Sbjct: 145 SRGFCFIYFENLGDARVAKDACTGM---EVDGRRIRVDYSITQRA 186
>Q44554:RBPB_ANASP Putative RNA-binding protein rbpB - Anabaena sp. (strain PCC 7120)| Length = 103 Score = 42.7 bits (99), Expect = 0.002 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +2 Query: 551 LSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV- 724 +S YVGNLS++++E+ L F + + ++ +D+ TG RGF V+ D A+ Sbjct: 1 MSIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIE 60 Query: 725 GMNQSELRGRPVKI 766 ++ +E GR +K+ Sbjct: 61 ALDGAEWMGRDLKV 74
>Q6CQR6:MRD1_KLULA Multiple RNA-binding domain-containing protein 1 - Kluyveromyces| lactis (Yeast) (Candida sphaerica) Length = 878 Score = 42.7 bits (99), Expect = 0.002 Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Frame = +2 Query: 245 ECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFE-SDEVALK 421 E G++ + YT TE++ R+LF +G + + ++ +G +G A+V F+ +D A Sbjct: 328 ETGRLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATA 387 Query: 422 SLELDGYKIGNRFMRVERCRITASSKRQKKTE 517 +ELD R + + + A +K+ K + Sbjct: 388 FVELDKQIFQGRLLHI----LPADAKKSHKLD 415 Score = 38.9 bits (89), Expect = 0.033 Identities = 17/49 (34%), Positives = 31/49 (63%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTF 397 GK++ +P+ T +++ ELF FG ++S+++ + D + RG AFV F Sbjct: 752 GKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDK-SARGFAFVEF 799 Score = 38.5 bits (88), Expect = 0.043 Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 20/156 (12%) Frame = +2 Query: 401 SDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEF-QSDPEKPDGCLSA------ 559 +D++A D + NR +R++ T SK+Q++ + Q PE+ + S Sbjct: 262 TDDMAKDEAVSDLDWLKNRRVRIKDGADTPVSKQQQQPDTEQQQPEETEVETSQESEEEK 321 Query: 560 -----------YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFED- 700 ++ N+ + +E D R F + + A+D RTG S+GF +V F++ Sbjct: 322 SLKKIRETGRLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNA 381 Query: 701 DESLEKAVGMNQSELRGRPVKIAYAIINRA*RLSSW 808 D + V +++ +GR + I A ++ +L + Sbjct: 382 DNAATAFVELDKQIFQGRLLHILPADAKKSHKLDEF 417 Score = 35.0 bits (79), Expect = 0.47 Identities = 22/65 (33%), Positives = 29/65 (44%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELD 436 ++ PY TT EEI ELF FG ++ L L P SG L F + A + Sbjct: 518 ILVKNFPYGTTREEIAELFLPFGKLQRLLL---PPSGTIAILQFRDVPAARAAFSKISYK 574 Query: 437 GYKIG 451 +K G Sbjct: 575 RFKDG 579
>Q19706:IF34_CAEEL Probable eukaryotic translation initiation factor 3 subunit 4 -| Caenorhabditis elegans Length = 256 Score = 42.7 bits (99), Expect = 0.002 Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Frame = +2 Query: 266 SGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSLELDGY 442 + +P E+E+R+LF + G + + ++R +G +G AFVTFES D+ A EL+ Sbjct: 181 TNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELNDI 240 Query: 443 KIGNRFMRVERCR 481 ++ + ++VE R Sbjct: 241 RMYHMVLKVEWTR 253
>Q6PDU1:SFRS2_RAT Splicing factor, arginine/serine-rich 2 - Rattus norvegicus (Rat)| Length = 221 Score = 42.4 bits (98), Expect = 0.003 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Frame = +2 Query: 530 PEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 P +G S V NL++ S LR F K R+ + D+ T +SRGF V F D Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66 Query: 707 SLEKAV-GMNQSELRGRPVKIAYAIINR 787 E A+ M+ + L GR +++ A R Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYGR 94
>Q06A98:SFRS2_PIG Splicing factor, arginine/serine-rich 2 - Sus scrofa (Pig)| Length = 221 Score = 42.4 bits (98), Expect = 0.003 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Frame = +2 Query: 530 PEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 P +G S V NL++ S LR F K R+ + D+ T +SRGF V F D Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66 Query: 707 SLEKAV-GMNQSELRGRPVKIAYAIINR 787 E A+ M+ + L GR +++ A R Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYGR 94
>Q5R1W5:SFRS2_PANTR Splicing factor, arginine/serine-rich 2 - Pan troglodytes| (Chimpanzee) Length = 221 Score = 42.4 bits (98), Expect = 0.003 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Frame = +2 Query: 530 PEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 P +G S V NL++ S LR F K R+ + D+ T +SRGF V F D Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66 Query: 707 SLEKAV-GMNQSELRGRPVKIAYAIINR 787 E A+ M+ + L GR +++ A R Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYGR 94
>Q62093:SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 - Mus musculus (Mouse)| Length = 221 Score = 42.4 bits (98), Expect = 0.003 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Frame = +2 Query: 530 PEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 P +G S V NL++ S LR F K R+ + D+ T +SRGF V F D Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66 Query: 707 SLEKAV-GMNQSELRGRPVKIAYAIINR 787 E A+ M+ + L GR +++ A R Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYGR 94
>Q01130:SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 - Homo sapiens (Human)| Length = 221 Score = 42.4 bits (98), Expect = 0.003 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Frame = +2 Query: 530 PEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 P +G S V NL++ S LR F K R+ + D+ T +SRGF V F D Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66 Query: 707 SLEKAV-GMNQSELRGRPVKIAYAIINR 787 E A+ M+ + L GR +++ A R Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYGR 94
>P30352:SFRS2_CHICK Splicing factor, arginine/serine-rich 2 - Gallus gallus (Chicken)| Length = 221 Score = 42.4 bits (98), Expect = 0.003 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Frame = +2 Query: 530 PEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 P +G S V NL++ S LR F K R+ + D+ T +SRGF V F D Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66 Query: 707 SLEKAV-GMNQSELRGRPVKIAYAIINR 787 E A+ M+ + L GR +++ A R Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYGR 94
>Q3MHR5:SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 - Bos taurus (Bovine)| Length = 221 Score = 42.4 bits (98), Expect = 0.003 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Frame = +2 Query: 530 PEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDE 706 P +G S V NL++ S LR F K R+ + D+ T +SRGF V F D Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66 Query: 707 SLEKAV-GMNQSELRGRPVKIAYAIINR 787 E A+ M+ + L GR +++ A R Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYGR 94
>Q9QZH3:PPIE_MOUSE Peptidyl-prolyl cis-trans isomerase E - Mus musculus (Mouse)| Length = 301 Score = 42.4 bits (98), Expect = 0.003 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 YVG L+ + +K L F I I+ +D T RGF V+FE E A+ MN Sbjct: 9 YVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMN 68 Query: 734 QSELRGRPVKIAYA 775 +SEL GR +++ A Sbjct: 69 ESELFGRTIRVNLA 82
>Q9UNP9:PPIE_HUMAN Peptidyl-prolyl cis-trans isomerase E - Homo sapiens (Human)| Length = 301 Score = 42.4 bits (98), Expect = 0.003 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRD-FFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 YVG L+ + +K L F I I+ +D T RGF V+FE E A+ MN Sbjct: 9 YVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMN 68 Query: 734 QSELRGRPVKIAYA 775 +SEL GR +++ A Sbjct: 69 ESELFGRTIRVNLA 82
>P38656:LA_RAT Lupus La protein homolog - Rattus norvegicus (Rat)| Length = 415 Score = 42.4 bits (98), Expect = 0.003 Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 22/197 (11%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELD 436 V G P T ++I+E D G I ++Q+ R F+G F F+S + A K ++ Sbjct: 113 VYIKGFPTDATLDDIKEWLDDKGQILNIQMRRTLHK-TFKGSIFAVFDSIQSAKKFVDTP 171 Query: 437 GYKIGNRFMRV--------------ERCRITASSKRQKKTEFQSDP--------EKPDGC 550 G K + + + ++ ++ A K +++ E + P E GC Sbjct: 172 GQKYKDTNLLILFKEDYFAKKNEERKQSKVEAKLKAKQEHEGRHKPGSTETRALEGKMGC 231 Query: 551 LSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGM 730 L + G+L +D F S I++ ID G G + ++LEKA Sbjct: 232 LLKFSGDLDDQTCREDFHFLF--SNHGEIKW-IDFVRGAKEGIILFKEKAKDALEKARSA 288 Query: 731 NQSELRGRPVKIAYAII 781 N L R K+ + ++ Sbjct: 289 NNGNLLLRNKKVTWKVL 305
>P23241:ELAV_DROVI Protein elav - Drosophila virilis (Fruit fly)| Length = 519 Score = 42.4 bits (98), Expect = 0.003 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +2 Query: 284 TTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSLELDGYKIGNRF 460 T E + +LF FG ++S+++ + P + +G FV+ + DE A+ L+GY +GNR Sbjct: 449 TEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRV 508 Query: 461 MRV 469 ++V Sbjct: 509 LQV 511 Score = 37.4 bits (85), Expect = 0.096 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 14/89 (15%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSR-------------FPDSGNFRGLAFVTF 397 ++ + +P T TE+EIR LF G I S++L R P G G FV + Sbjct: 187 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 246 Query: 398 ESDEVALKSLE-LDGYKIGNRFMRVERCR 481 + A +++ L+G ++ N+ ++V R Sbjct: 247 VRPQDAEQAVNVLNGLRLQNKTIKVSFAR 275
>P16914:ELAV_DROME Protein elav - Drosophila melanogaster (Fruit fly)| Length = 483 Score = 42.4 bits (98), Expect = 0.003 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +2 Query: 284 TTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSLELDGYKIGNRF 460 T E + +LF FG ++S+++ + P + +G FV+ + DE A+ L+GY +GNR Sbjct: 413 TEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRV 472 Query: 461 MRV 469 ++V Sbjct: 473 LQV 475 Score = 37.4 bits (85), Expect = 0.096 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 14/89 (15%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSR-------------FPDSGNFRGLAFVTF 397 ++ + +P T TE+EIR LF G I S++L R P G G FV + Sbjct: 151 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 210 Query: 398 ESDEVALKSLE-LDGYKIGNRFMRVERCR 481 + A +++ L+G ++ N+ ++V R Sbjct: 211 VRPQDAEQAVNVLNGLRLQNKTIKVSFAR 239
>Q6CEW9:MRD1_YARLI Multiple RNA-binding domain-containing protein 1 - Yarrowia| lipolytica (Candida lipolytica) Length = 828 Score = 42.0 bits (97), Expect = 0.004 Identities = 21/66 (31%), Positives = 34/66 (51%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G++ + YT EE+ R+LF ++G + + L +G +G A V FE E A+ + E Sbjct: 301 GRLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYE 360 Query: 431 LDGYKI 448 KI Sbjct: 361 AQDGKI 366 Score = 38.9 bits (89), Expect = 0.033 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDES 709 ++ NL + E+D R F + + I+ +TG +GF HV FED E+ Sbjct: 304 FLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPEN 354 Score = 36.6 bits (83), Expect = 0.16 Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 26/181 (14%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQL-----------SRFPDS-GNFRGLAFVTFE 400 ++ P+ TT+ EI E+F +G + + + PD+ F LAF F+ Sbjct: 487 ILVKNFPFGTTQPEIAEMFSEYGDLYKVMMPPAGTIAIVIFKHIPDARAAFAKLAFRRFK 546 Query: 401 SD----EVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQ---SDPEKP-DGCLS 556 + E K+L + + V++ +I + ++ S+ E+P S Sbjct: 547 TSILYLEKGPKNLLPNEKMESDEVEHVKQDKIVTIEDKLSASDVMDTGSNDERPATASTS 606 Query: 557 AYVGNLSWNISEKDLRDFFKS---SRIASIRFAIDKRTGD---SRGFCHVDFEDDESLEK 718 +V NL++ + + L D FK+ +A ++ D + S GF V+F E+ E Sbjct: 607 VFVKNLNFKTTSRVLTDAFKALDGFLVAQVKMKPDSKNKGKFLSMGFGFVEFSSKEAAEI 666 Query: 719 A 721 A Sbjct: 667 A 667
>Q5AJS6:MRD1_CANAL Multiple RNA-binding domain-containing protein 1 - Candida albicans| (Yeast) Length = 841 Score = 42.0 bits (97), Expect = 0.004 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 ++ N+S+ SE+D R F + + AID RTG S+GF +V F E +A ++ Sbjct: 313 FIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSLD 372 Query: 734 QSELRGRPVKI 766 + +GR + I Sbjct: 373 KQIFQGRLLHI 383 Score = 39.7 bits (91), Expect = 0.019 Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 14/138 (10%) Frame = +2 Query: 239 SYECGKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTF---ESDE 409 S + K++ +P+ T +++ ELF FG ++S+++ + D + RG AFV F + E Sbjct: 713 SGKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQ-SARGFAFVEFNLMKEAE 771 Query: 410 VALKSLELDGYKIGNRFM-----------RVERCRITASSKRQKKTEFQSDPEKPDGCLS 556 A+ LE + +G R + VE R+T K+Q T+ + + Sbjct: 772 TAMSQLE-GVHLLGRRLVMQYAEQDPENAEVEIERMTKKVKKQVATQ--------NLAAA 822 Query: 557 AYVGNLSWNISEKDLRDF 610 G + EKD DF Sbjct: 823 RLAGKGKIELEEKDEEDF 840 Score = 35.4 bits (80), Expect = 0.36 Identities = 16/59 (27%), Positives = 36/59 (61%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 +++ G+P TEE++RE F + G + ++L + +G R AF+ ++S + A ++++ Sbjct: 3 RLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMK-KRNGESRKFAFIGYKSADAAERAVK 60 Score = 31.2 bits (69), Expect = 6.8 Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Frame = +2 Query: 587 SEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG-MNQSELRGRPV 760 +E+ LR+FF K + ++ + KR G+SR F + ++ ++ E+AV N+S + + Sbjct: 14 TEEKLREFFSKQGDVTDVKL-MKKRNGESRKFAFIGYKSADAAERAVKYFNKSFIDTARI 72 Query: 761 KIAYA 775 ++ +A Sbjct: 73 EVEFA 77
>P40565:IST3_YEAST U2 snRNP component IST3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 148 Score = 42.0 bits (97), Expect = 0.004 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKSSRI-ASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 Y+GNL+ ++E D+ F + + + D+ TG+S+GF ++ +ED S AV +N Sbjct: 34 YIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLN 93 Query: 734 QSELRGRPVKI 766 ++ GR +KI Sbjct: 94 GFKIGGRALKI 104
>Q20870:DAZ1_CAEEL DAZ protein 1 - Caenorhabditis elegans| Length = 499 Score = 42.0 bits (97), Expect = 0.004 Identities = 18/54 (33%), Positives = 35/54 (64%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVA 415 ++ G P +TTE E+RE F++F ++ +++ + D G +G F+TFE+++ A Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQA 120
>P19018:TRA2_DROME Transformer-2 sex-determining protein - Drosophila melanogaster| (Fruit fly) Length = 264 Score = 41.6 bits (96), Expect = 0.005 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFE--SDEVALK----SLE 430 G+ T++ ++RELF+++GPI +Q+ + RG F+ FE SD A K +E Sbjct: 103 GLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIE 162 Query: 431 LDGYKIGNRFMRVER 475 +DG +I F +R Sbjct: 163 VDGRRIRVDFSITQR 177 Score = 40.8 bits (94), Expect = 0.009 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 2/108 (1%) Frame = +2 Query: 473 RCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF-KSSRIASIRFAI 649 R R SS+ +++ + + C+ + L+ N S+ +R+ F K I I+ I Sbjct: 73 RHRSGRSSRDRERMHKSREHPQASRCIGVF--GLNTNTSQHKVRELFNKYGPIERIQMVI 130 Query: 650 DKRTGDSRGFCHVDFEDDESLEKAV-GMNQSELRGRPVKIAYAIINRA 790 D +T SRGFC + FE A + E+ GR +++ ++I RA Sbjct: 131 DAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRA 178
>P39697:RT19_ARATH 40S ribosomal protein S19, mitochondrial precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 212 Score = 41.6 bits (96), Expect = 0.005 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEKAV-GMN 733 Y+G LS E L+D F S + + R +K TG SRG+ V+F ++S A+ MN Sbjct: 34 YIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMN 93 Query: 734 QSELRGRPVKIAYA 775 EL G + + A Sbjct: 94 GQELNGFNISVNVA 107
>Q7SG09:MRD1_NEUCR Multiple RNA-binding domain-containing protein 1 - Neurospora| crassa Length = 827 Score = 41.6 bits (96), Expect = 0.005 Identities = 22/82 (26%), Positives = 43/82 (52%) Frame = +2 Query: 272 MPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKIG 451 + YT TE+++RE F +FG + + + G+ +G A + +E AL + + DG Sbjct: 315 LSYTVTEDDVREHFAKFGILVEVHVP-LDSKGHSKGFAMIRYEKPASALAAFQTDGTVFQ 373 Query: 452 NRFMRVERCRITASSKRQKKTE 517 R + + + A++KR+ K + Sbjct: 374 GRIVHI----LPAAAKRENKLD 391 Score = 37.0 bits (84), Expect = 0.12 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 3/73 (4%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQL-SRFPDSGNFRGLAFVTFESDEVALKSLE 430 K+V +P+ T++E+R LF +G + +L++ +F S RG AF F + + AL + Sbjct: 705 KLVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQSS--RGFAFAEFSTAKEALNAFN 762 Query: 431 --LDGYKIGNRFM 463 D + +G R + Sbjct: 763 SLKDTHILGRRLV 775 Score = 36.2 bits (82), Expect = 0.21 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 5/112 (4%) Frame = +2 Query: 488 ASSKRQKKTEFQSDPEKPDGCLSA----YVGNLSWNISEKDLRDFF-KSSRIASIRFAID 652 A R+ DPE + ++ NLS+ ++E D+R+ F K + + +D Sbjct: 283 AEDSREMAATSTHDPESAISLIEKTSRLFLRNLSYTVTEDDVREHFAKFGILVEVHVPLD 342 Query: 653 KRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKIAYAIINRA*RLSSW 808 + G S+GF + +E S A + + +GR V I A R +L + Sbjct: 343 SK-GHSKGFAMIRYEKPASALAAFQTDGTVFQGRIVHILPAAAKRENKLDEF 393
>Q5KJL5:MRD1_CRYNE Multiple RNA-binding domain-containing protein 1 - Cryptococcus| neoformans (Filobasidiella neoformans) Length = 769 Score = 41.6 bits (96), Expect = 0.005 Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 5/64 (7%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSR--FPDS---GNFRGLAFVTFESDEVAL 418 KV+ +P+ T++++RELF +G ++SL+L R P S + RG AF+ F + A Sbjct: 641 KVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTEAA 700 Query: 419 KSLE 430 +++E Sbjct: 701 RAME 704
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 41.6 bits (96), Expect = 0.005 Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFES-DEVALKSL 427 GK+ G+ + T E+ + + F ++G I + + + ++ RG FVTFE+ D+ + Sbjct: 5 GKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMM 64 Query: 428 ELDGYKIGNRFMRVERCRITASSKR 502 ++G + R +RV++ ++ +R Sbjct: 65 AMNGKSVDGRQIRVDQAGKSSGERR 89 Score = 38.5 bits (88), Expect = 0.043 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = +2 Query: 560 YVGNLSWNISEKDLRDFF-KSSRIASIRFAIDKRTGDSRGFCHVDFED-DESLEKAVGMN 733 ++G L++ +E L F K RI+ + D+ T SRGF V FE+ D++ + + MN Sbjct: 8 FIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMN 67 Query: 734 QSELRGRPVKIAYA 775 + GR +++ A Sbjct: 68 GKSVDGRQIRVDQA 81
>P26369:U2AF2_MOUSE Splicing factor U2AF 65 kDa subunit - Mus musculus (Mouse)| Length = 475 Score = 41.2 bits (95), Expect = 0.007 Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE- 430 K+ G+P +++++EL FGP+++ L + +G +G AF + V +++ Sbjct: 260 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAG 319 Query: 431 LDGYKIGNRFMRVERCRITASS 496 L+G ++G++ + V+R + A + Sbjct: 320 LNGMQLGDKKLLVQRASVGAKN 341
>P26368:U2AF2_HUMAN Splicing factor U2AF 65 kDa subunit - Homo sapiens (Human)| Length = 475 Score = 41.2 bits (95), Expect = 0.007 Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE- 430 K+ G+P +++++EL FGP+++ L + +G +G AF + V +++ Sbjct: 260 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAG 319 Query: 431 LDGYKIGNRFMRVERCRITASS 496 L+G ++G++ + V+R + A + Sbjct: 320 LNGMQLGDKKLLVQRASVGAKN 341
>Q3US41:RB35A_MOUSE RNA-binding protein 35A - Mus musculus (Mouse)| Length = 680 Score = 41.2 bits (95), Expect = 0.007 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 4/95 (4%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPI----RSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELD 436 G+P+T T EE+ F + PI + +PD G G AFV F +E A +L Sbjct: 331 GLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD-GRPTGDAFVLFACEEYAQNALRKH 389 Query: 437 GYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKP 541 +G R+ +E R TA+ +Q F S P P Sbjct: 390 KELLGKRY--IELFRSTAAEVQQVLNRFSSAPLIP 422
>Q9P6M8:PABPX_SCHPO mRNA export factor crp79 - Schizosaccharomyces pombe (Fission| yeast) Length = 710 Score = 41.2 bits (95), Expect = 0.007 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Frame = +2 Query: 284 TTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE-LDGYKIGNRF 460 T + ++ +LF FG I S L+ +P+SG +G FV F E A+++ + L+G +G + Sbjct: 395 TCKSQLEDLFSPFGSILSSMLACYPNSGISKGYGFVAFRQIEAAVRAKDTLNGMMVGKK- 453 Query: 461 MRVERCRITASSKRQKKTE 517 R+ C S R ++ + Sbjct: 454 -RIFVCFAERKSDRIRRLQ 471
>Q7TP47:HNRPQ_RAT Heterogeneous nuclear ribonucleoprotein Q - Rattus norvegicus (Rat)| Length = 533 Score = 41.2 bits (95), Expect = 0.007 Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 3/159 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 ++ +P E+E+ LF++ GPI L+L P +G RG AFVTF + E A ++++L Sbjct: 73 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 132 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + C A+++ +VG++ + +++ + + F Sbjct: 133 YNNHEIRSGKHIGVCISVANNR-------------------LFVGSIPKSKTKEQILEEF 173 Query: 614 KSSRIASIRFAIDKRTGD---SRGFCHVDFEDDESLEKA 721 + + D +RGFC +++ED ++ +A Sbjct: 174 SKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQA 212
>Q7TMK9:HNRPQ_MOUSE Heterogeneous nuclear ribonucleoprotein Q - Mus musculus (Mouse)| Length = 623 Score = 41.2 bits (95), Expect = 0.007 Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 3/159 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 ++ +P E+E+ LF++ GPI L+L P +G RG AFVTF + E A ++++L Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + C A+++ +VG++ + +++ + + F Sbjct: 223 YNNHEIRSGKHIGVCISVANNR-------------------LFVGSIPKSKTKEQILEEF 263 Query: 614 KSSRIASIRFAIDKRTGD---SRGFCHVDFEDDESLEKA 721 + + D +RGFC +++ED ++ +A Sbjct: 264 SKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQA 302
>O60506:HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q - Homo sapiens (Human)| Length = 623 Score = 41.2 bits (95), Expect = 0.007 Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 3/159 (1%) Frame = +2 Query: 254 KVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLEL 433 ++ +P E+E+ LF++ GPI L+L P +G RG AFVTF + E A ++++L Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222 Query: 434 DGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFF 613 + C A+++ +VG++ + +++ + + F Sbjct: 223 YNNHEIRSGKHIGVCISVANNR-------------------LFVGSIPKSKTKEQILEEF 263 Query: 614 KSSRIASIRFAIDKRTGD---SRGFCHVDFEDDESLEKA 721 + + D +RGFC +++ED ++ +A Sbjct: 264 SKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQA 302
>Q6AY09:HNRH2_RAT Heterogeneous nuclear ribonucleoprotein H' - Rattus norvegicus| (Rat) Length = 449 Score = 41.2 bits (95), Expect = 0.007 Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 6/176 (3%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRF--PDSGNFRGLAFVTFESDEVALKSLE 430 V G+P++ + EE+ F RF G G AFV ES++ +L+ Sbjct: 13 VKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLALK 72 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYV--GNLSWNISEKDLR 604 D +G+R++ V + K T P PD +V L + S++++ Sbjct: 73 KDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGFVRLRGLPFGCSKEEIV 128 Query: 605 DFFKSSRIA--SIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 FF I + +D + G S G V F E EKA+ ++ + R ++I Sbjct: 129 QFFSGLEIVPNGMTLPVDFQ-GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEI 183 Score = 38.5 bits (88), Expect = 0.043 Identities = 27/96 (28%), Positives = 48/96 (50%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G V G+P+ ++EEI + F + + G G AFV F S E+A K+L+ Sbjct: 111 GFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK 170 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEK 538 +IG+R++ + + SS+ + +T + DP + Sbjct: 171 KHKERIGHRYIEIFK-----SSRAEVRTHY--DPPR 199 Score = 32.3 bits (72), Expect = 3.1 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKI 448 G+PY TE +I F P+R + + PD G G A V F + E A+ ++ D + Sbjct: 295 GLPYRATENDIYNFFSPLNPMR-VHIEIGPD-GRVTGEADVEFATHEDAVAAMAKDKANM 352 Query: 449 GNRFMRV 469 +R++ + Sbjct: 353 QHRYVEL 359
>P70333:HNRH2_MOUSE Heterogeneous nuclear ribonucleoprotein H' - Mus musculus (Mouse)| Length = 449 Score = 41.2 bits (95), Expect = 0.007 Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 6/176 (3%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRF--PDSGNFRGLAFVTFESDEVALKSLE 430 V G+P++ + EE+ F RF G G AFV ES++ +L+ Sbjct: 13 VKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLALK 72 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYV--GNLSWNISEKDLR 604 D +G+R++ V + K T P PD +V L + S++++ Sbjct: 73 KDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGFVRLRGLPFGCSKEEIV 128 Query: 605 DFFKSSRIA--SIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 FF I + +D + G S G V F E EKA+ ++ + R ++I Sbjct: 129 QFFSGLEIVPNGMTLPVDFQ-GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEI 183 Score = 38.5 bits (88), Expect = 0.043 Identities = 27/96 (28%), Positives = 48/96 (50%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G V G+P+ ++EEI + F + + G G AFV F S E+A K+L+ Sbjct: 111 GFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK 170 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEK 538 +IG+R++ + + SS+ + +T + DP + Sbjct: 171 KHKERIGHRYIEIFK-----SSRAEVRTHY--DPPR 199 Score = 32.3 bits (72), Expect = 3.1 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKI 448 G+PY TE +I F P+R + + PD G G A V F + E A+ ++ D + Sbjct: 295 GLPYRATENDIYNFFSPLNPMR-VHIEIGPD-GRVTGEADVEFATHEDAVAAMAKDKANM 352 Query: 449 GNRFMRV 469 +R++ + Sbjct: 353 QHRYVEL 359
>P55795:HNRH2_HUMAN Heterogeneous nuclear ribonucleoprotein H' - Homo sapiens (Human)| Length = 449 Score = 41.2 bits (95), Expect = 0.007 Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 6/176 (3%) Frame = +2 Query: 257 VVASGMPYTTTEEEIRELFDRFGPIRSLQLSRF--PDSGNFRGLAFVTFESDEVALKSLE 430 V G+P++ + +E+ F RF G G AFV ES+E +L+ Sbjct: 13 VKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLALK 72 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYV--GNLSWNISEKDLR 604 D +G+R++ V + K T P PD +V L + S++++ Sbjct: 73 KDRETMGHRYVEVFKSNSVEMDWVLKHT----GPNSPDTANDGFVRLRGLPFGCSKEEIV 128 Query: 605 DFFKSSRIA--SIRFAIDKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPVKI 766 FF I + +D + G S G V F E EKA+ ++ + R ++I Sbjct: 129 QFFSGLEIVPNGMTLPVDFQ-GRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEI 183 Score = 38.5 bits (88), Expect = 0.043 Identities = 27/96 (28%), Positives = 48/96 (50%) Frame = +2 Query: 251 GKVVASGMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLE 430 G V G+P+ ++EEI + F + + G G AFV F S E+A K+L+ Sbjct: 111 GFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK 170 Query: 431 LDGYKIGNRFMRVERCRITASSKRQKKTEFQSDPEK 538 +IG+R++ + + SS+ + +T + DP + Sbjct: 171 KHKERIGHRYIEIFK-----SSRAEVRTHY--DPPR 199 Score = 32.3 bits (72), Expect = 3.1 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKI 448 G+PY TE +I F P+R + + PD G G A V F + E A+ ++ D + Sbjct: 295 GLPYRATENDIYNFFSPLNPMR-VHIEIGPD-GRVTGEADVEFATHEDAVAAMAKDKANM 352 Query: 449 GNRFMRV 469 +R++ + Sbjct: 353 QHRYVEL 359
>Q3ZBP3:RBMS1_BOVIN RNA-binding motif, single-stranded-interacting protein 1 - Bos| taurus (Bovine) Length = 403 Score = 40.8 bits (94), Expect = 0.009 Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 1/154 (0%) Frame = +2 Query: 269 GMPYTTTEEEIRELFDRFGPIRSLQLSRFPDSGNFRGLAFVTFESDEVALKSLELDGYKI 448 G+P TT++++ +L +G I S + + +G FV F+S A K++ Sbjct: 68 GLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVS------ 121 Query: 449 GNRFMRVERCRITASSKRQKKTEFQSDPEKPDGCLSAYVGNLSWNISEKDLRDFFKS-SR 625 ++ + A +Q+ + DP + Y+ NL ++ E++L + K + Sbjct: 122 -----ALKASGVQAQMAKQQ----EQDP------TNLYISNLPLSMDEQELENMLKPFGQ 166 Query: 626 IASIRFAIDKRTGDSRGFCHVDFEDDESLEKAVG 727 + S R D +G SRG E E E +G Sbjct: 167 VISTRILRDS-SGTSRGVGFARMESTEKCEAVIG 199 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 137,734,703 Number of extensions: 2492310 Number of successful extensions: 8164 Number of sequences better than 10.0: 522 Number of HSP's gapped: 7908 Number of HSP's successfully gapped: 809 Length of query: 332 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 218 Effective length of database: 69,416,809 Effective search space: 15132864362 Effective search space used: 15132864362 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
