ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf93l13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001055338.1| Oryza sativa (japonica cultivar-group) Os03g0123200 (Os03g0123200) mRNA, complete cds Length = 1090 Score = 248 bits (125), Expect = 3e-62 Identities = 218/249 (87%) Strand = Plus / Plus Query: 254 aaggtggtggcgagcggcatgccgtacacgaccaccgaggaagagatccgggagctgttc 313 ||||||||||| |||||| |||||||||| |||||||||| |||||||||||||| ||| Sbjct: 354 aaggtggtggccagcggcctgccgtacaccaccaccgaggcggagatccgggagctcttc 413 Query: 314 gaccggttcggccccatccgctccctccagctctcccgcttcccggactccggcaacttc 373 || |||||||| ||| |||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 414 gagcggttcggtcccctccggtcgctccagctctctcgcttcccggactccggcaacttc 473 Query: 374 cgcggcctcgccttcgtcaccttcgagtcagatgaagttgccctgaaatctctggagctt 433 ||||||||||| |||||| ||||||||||| | || || | |||| ||||| |||||| Sbjct: 474 cgcggcctcgcgttcgtctccttcgagtcaaacgaggtggtaatgaagtctcttgagctt 533 Query: 434 gatggatacaaaattggtaacaggtttatgagggttgaaagatgcaggattactgctagc 493 || |||| ||||||||| |||||||||||||| ||||||||||||||| | ||||| || Sbjct: 534 gacggattcaaaattggcaacaggtttatgagagttgaaagatgcaggttggctgctggc 593 Query: 494 tcgaagagg 502 ||||||||| Sbjct: 594 tcgaagagg 602 Score = 139 bits (70), Expect = 2e-29 Identities = 148/174 (85%) Strand = Plus / Plus Query: 625 gattgcatcaataagatttgccatcgacaagagaacaggagattctcgtggcttctgcca 684 |||| |||| ||||| ||||| ||| ||||||||||||| ||||||||||| || || || Sbjct: 725 gatttcatcgataaggtttgctatcaacaagagaacaggtgattctcgtggtttttgtca 784 Query: 685 tgttgatttcgaggacgatgaatcgcttgagaaagctgtcgggatgaatcaatctgaact 744 ||||||||| |||||||| || ||||||||||| ||||| || ||||||||||||||||| Sbjct: 785 tgttgattttgaggacgacgagtcgcttgagaaggctgtaggaatgaatcaatctgaact 844 Query: 745 gcgcggaagacccgtgaagatagcgtatgctatcatcaacagggcctgaaggct 798 |||||| |||| | |||||| | |||||| ||| ||||||| ||||||||| Sbjct: 845 gcgcggccgacctatcaagatatcatatgctgtcagtaacaggggctgaaggct 898 Score = 87.7 bits (44), Expect = 7e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 88 gaacagcaagaagcggaagaagcccaagaaggacaagtggggccagcctatc 139 ||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 179 gaacagcaagaagaggaagaagcccaggaaggacaagtggggccagcctatc 230
>dbj|AK066740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082B19, full insert sequence Length = 1092 Score = 248 bits (125), Expect = 3e-62 Identities = 218/249 (87%) Strand = Plus / Plus Query: 254 aaggtggtggcgagcggcatgccgtacacgaccaccgaggaagagatccgggagctgttc 313 ||||||||||| |||||| |||||||||| |||||||||| |||||||||||||| ||| Sbjct: 356 aaggtggtggccagcggcctgccgtacaccaccaccgaggcggagatccgggagctcttc 415 Query: 314 gaccggttcggccccatccgctccctccagctctcccgcttcccggactccggcaacttc 373 || |||||||| ||| |||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 416 gagcggttcggtcccctccggtcgctccagctctctcgcttcccggactccggcaacttc 475 Query: 374 cgcggcctcgccttcgtcaccttcgagtcagatgaagttgccctgaaatctctggagctt 433 ||||||||||| |||||| ||||||||||| | || || | |||| ||||| |||||| Sbjct: 476 cgcggcctcgcgttcgtctccttcgagtcaaacgaggtggtaatgaagtctcttgagctt 535 Query: 434 gatggatacaaaattggtaacaggtttatgagggttgaaagatgcaggattactgctagc 493 || |||| ||||||||| |||||||||||||| ||||||||||||||| | ||||| || Sbjct: 536 gacggattcaaaattggcaacaggtttatgagagttgaaagatgcaggttggctgctggc 595 Query: 494 tcgaagagg 502 ||||||||| Sbjct: 596 tcgaagagg 604 Score = 139 bits (70), Expect = 2e-29 Identities = 148/174 (85%) Strand = Plus / Plus Query: 625 gattgcatcaataagatttgccatcgacaagagaacaggagattctcgtggcttctgcca 684 |||| |||| ||||| ||||| ||| ||||||||||||| ||||||||||| || || || Sbjct: 727 gatttcatcgataaggtttgctatcaacaagagaacaggtgattctcgtggtttttgtca 786 Query: 685 tgttgatttcgaggacgatgaatcgcttgagaaagctgtcgggatgaatcaatctgaact 744 ||||||||| |||||||| || ||||||||||| ||||| || ||||||||||||||||| Sbjct: 787 tgttgattttgaggacgacgagtcgcttgagaaggctgtaggaatgaatcaatctgaact 846 Query: 745 gcgcggaagacccgtgaagatagcgtatgctatcatcaacagggcctgaaggct 798 |||||| |||| | |||||| | |||||| ||| ||||||| ||||||||| Sbjct: 847 gcgcggccgacctatcaagatatcatatgctgtcagtaacaggggctgaaggct 900 Score = 87.7 bits (44), Expect = 7e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 88 gaacagcaagaagcggaagaagcccaagaaggacaagtggggccagcctatc 139 ||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 181 gaacagcaagaagaggaagaagcccaggaaggacaagtggggccagcctatc 232
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 180 bits (91), Expect = 6e-42 Identities = 133/147 (90%) Strand = Plus / Plus Query: 254 aaggtggtggcgagcggcatgccgtacacgaccaccgaggaagagatccgggagctgttc 313 ||||||||||| |||||| |||||||||| |||||||||| |||||||||||||| ||| Sbjct: 1302585 aaggtggtggccagcggcctgccgtacaccaccaccgaggcggagatccgggagctcttc 1302644 Query: 314 gaccggttcggccccatccgctccctccagctctcccgcttcccggactccggcaacttc 373 || |||||||| ||| |||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 1302645 gagcggttcggtcccctccggtcgctccagctctctcgcttcccggactccggcaacttc 1302704 Query: 374 cgcggcctcgccttcgtcaccttcgag 400 ||||||||||| |||||| |||||||| Sbjct: 1302705 cgcggcctcgcgttcgtctccttcgag 1302731 Score = 139 bits (70), Expect = 2e-29 Identities = 148/174 (85%) Strand = Plus / Plus Query: 625 gattgcatcaataagatttgccatcgacaagagaacaggagattctcgtggcttctgcca 684 |||| |||| ||||| ||||| ||| ||||||||||||| ||||||||||| || || || Sbjct: 1303632 gatttcatcgataaggtttgctatcaacaagagaacaggtgattctcgtggtttttgtca 1303691 Query: 685 tgttgatttcgaggacgatgaatcgcttgagaaagctgtcgggatgaatcaatctgaact 744 ||||||||| |||||||| || ||||||||||| ||||| || ||||||||||||||||| Sbjct: 1303692 tgttgattttgaggacgacgagtcgcttgagaaggctgtaggaatgaatcaatctgaact 1303751 Query: 745 gcgcggaagacccgtgaagatagcgtatgctatcatcaacagggcctgaaggct 798 |||||| |||| | |||||| | |||||| ||| ||||||| ||||||||| Sbjct: 1303752 gcgcggccgacctatcaagatatcatatgctgtcagtaacaggggctgaaggct 1303805 Score = 87.7 bits (44), Expect = 7e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 88 gaacagcaagaagcggaagaagcccaagaaggacaagtggggccagcctatc 139 ||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 1302410 gaacagcaagaagaggaagaagcccaggaaggacaagtggggccagcctatc 1302461 Score = 61.9 bits (31), Expect = 4e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 452 aacaggtttatgagggttgaaagatgcaggattactgctagctcgaagagg 502 |||||||||||||| ||||||||||||||| | ||||| ||||||||||| Sbjct: 1303459 aacaggtttatgagagttgaaagatgcaggttggctgctggctcgaagagg 1303509
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12, complete sequence Length = 146241 Score = 180 bits (91), Expect = 6e-42 Identities = 133/147 (90%) Strand = Plus / Plus Query: 254 aaggtggtggcgagcggcatgccgtacacgaccaccgaggaagagatccgggagctgttc 313 ||||||||||| |||||| |||||||||| |||||||||| |||||||||||||| ||| Sbjct: 107489 aaggtggtggccagcggcctgccgtacaccaccaccgaggcggagatccgggagctcttc 107548 Query: 314 gaccggttcggccccatccgctccctccagctctcccgcttcccggactccggcaacttc 373 || |||||||| ||| |||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 107549 gagcggttcggtcccctccggtcgctccagctctctcgcttcccggactccggcaacttc 107608 Query: 374 cgcggcctcgccttcgtcaccttcgag 400 ||||||||||| |||||| |||||||| Sbjct: 107609 cgcggcctcgcgttcgtctccttcgag 107635 Score = 139 bits (70), Expect = 2e-29 Identities = 148/174 (85%) Strand = Plus / Plus Query: 625 gattgcatcaataagatttgccatcgacaagagaacaggagattctcgtggcttctgcca 684 |||| |||| ||||| ||||| ||| ||||||||||||| ||||||||||| || || || Sbjct: 108536 gatttcatcgataaggtttgctatcaacaagagaacaggtgattctcgtggtttttgtca 108595 Query: 685 tgttgatttcgaggacgatgaatcgcttgagaaagctgtcgggatgaatcaatctgaact 744 ||||||||| |||||||| || ||||||||||| ||||| || ||||||||||||||||| Sbjct: 108596 tgttgattttgaggacgacgagtcgcttgagaaggctgtaggaatgaatcaatctgaact 108655 Query: 745 gcgcggaagacccgtgaagatagcgtatgctatcatcaacagggcctgaaggct 798 |||||| |||| | |||||| | |||||| ||| ||||||| ||||||||| Sbjct: 108656 gcgcggccgacctatcaagatatcatatgctgtcagtaacaggggctgaaggct 108709 Score = 87.7 bits (44), Expect = 7e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 88 gaacagcaagaagcggaagaagcccaagaaggacaagtggggccagcctatc 139 ||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 107314 gaacagcaagaagaggaagaagcccaggaaggacaagtggggccagcctatc 107365 Score = 61.9 bits (31), Expect = 4e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 452 aacaggtttatgagggttgaaagatgcaggattactgctagctcgaagagg 502 |||||||||||||| ||||||||||||||| | ||||| ||||||||||| Sbjct: 108363 aacaggtttatgagagttgaaagatgcaggttggctgctggctcgaagagg 108413
>gb|BT018692.1| Zea mays clone EL01N0512E07.d mRNA sequence Length = 1700 Score = 73.8 bits (37), Expect = 1e-09 Identities = 121/149 (81%) Strand = Plus / Plus Query: 545 ggctgcctctcggcttatgtcggcaatctctcatggaacatcagtgagaaggatttgaga 604 |||||||||||||||||||| || ||||||| ||||||| ||| ||| || || ||| || Sbjct: 79 ggctgcctctcggcttatgttggtaatctcttatggaacgtcattgaaaatgacttgcga 138 Query: 605 gatttcttcaaatcgtcaaggattgcatcaataagatttgccatcgacaagagaacagga 664 |||||||||| || || | |||||||| | |||| || | ||| ||||| ||||| || Sbjct: 139 gatttcttcagctcatcgaagattgcattagtaaggttcgtcattgacaaaagaactggg 198 Query: 665 gattctcgtggcttctgccatgttgattt 693 | ||| | |||||| || ||||||||||| Sbjct: 199 ggttcccatggcttttgtcatgttgattt 227
>gb|AY110713.1| Zea mays CL7875_1 mRNA sequence Length = 655 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 534 agaagcccgatggctgcctctcggcttatgtcggcaatctctcatggaac 583 ||||| |||| |||||||||||||| ||||| ||||| |||||||||||| Sbjct: 602 agaagtccgaaggctgcctctcggcatatgttggcaacctctcatggaac 553
>ref|XM_956402.1| Neurospora crassa OR74A hypothetical protein (NCU03719.1) partial mRNA Length = 2346 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 94 caagaagcggaagaagcccaaga 116 ||||||||||||||||||||||| Sbjct: 867 caagaagcggaagaagcccaaga 889
>emb|AL513467.1|NC17E5 Neurospora crassa DNA linkage group V Cosmid contig 17E5 Length = 130049 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Minus Query: 94 caagaagcggaagaagcccaaga 116 ||||||||||||||||||||||| Sbjct: 82978 caagaagcggaagaagcccaaga 82956
>emb|CR855188.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0102D10, complete sequence Length = 78391 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Plus Query: 209 gcggcggcggaggtcggggagg 230 |||||||||||||||||||||| Sbjct: 9180 gcggcggcggaggtcggggagg 9201
>emb|CR855153.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0823A09, complete sequence Length = 85663 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Plus Query: 209 gcggcggcggaggtcggggagg 230 |||||||||||||||||||||| Sbjct: 77539 gcggcggcggaggtcggggagg 77560
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Minus Query: 103 gaagaagcccaagaaggacaag 124 |||||||||||||||||||||| Sbjct: 4085423 gaagaagcccaagaaggacaag 4085402
>ref|NM_001063983.1| Oryza sativa (japonica cultivar-group) Os06g0300000 (Os06g0300000) mRNA, complete cds Length = 1393 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Minus Query: 203 gccgtagcggcggcggaggtcg 224 |||||||||||||||||||||| Sbjct: 230 gccgtagcggcggcggaggtcg 209
>ref|NM_001059377.1| Oryza sativa (japonica cultivar-group) Os04g0434500 (Os04g0434500) mRNA, complete cds Length = 852 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 gcggcggcggaggtcggggagg 230 |||||||||||||||||||||| Sbjct: 692 gcggcggcggaggtcggggagg 671
>ref|XM_001211689.1| Aspergillus terreus NIH2624 cell division control protein 16 (ATEG_02511) mRNA, complete cds Length = 1269 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cggccgacgagcgggcggtcga 168 |||||||||||||||||||||| Sbjct: 181 cggccgacgagcgggcggtcga 160
>ref|XM_001208982.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_01617) mRNA, complete cds Length = 960 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 cgggagctgttcgaccggttcg 323 |||||||||||||||||||||| Sbjct: 634 cgggagctgttcgaccggttcg 655
>gb|AC189561.2| Brassica rapa subsp. pekinensis clone KBrH007P05, complete sequence Length = 116269 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Minus Query: 559 ttatgtcggcaatctctcatgg 580 |||||||||||||||||||||| Sbjct: 116074 ttatgtcggcaatctctcatgg 116053
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Plus Query: 203 gccgtagcggcggcggaggtcg 224 |||||||||||||||||||||| Sbjct: 11017415 gccgtagcggcggcggaggtcg 11017436
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Plus Query: 209 gcggcggcggaggtcggggagg 230 |||||||||||||||||||||| Sbjct: 21609440 gcggcggcggaggtcggggagg 21609461 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 cgccgccgcggccgacgagcg 159 ||||||||||||||||||||| Sbjct: 21257591 cgccgccgcggccgacgagcg 21257571
>emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0086G13, complete sequence Length = 127952 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Plus Query: 209 gcggcggcggaggtcggggagg 230 |||||||||||||||||||||| Sbjct: 43982 gcggcggcggaggtcggggagg 44003
>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19, complete sequence Length = 156002 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Plus Query: 209 gcggcggcggaggtcggggagg 230 |||||||||||||||||||||| Sbjct: 131529 gcggcggcggaggtcggggagg 131550
>dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0501G08 Length = 173505 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Plus Query: 203 gccgtagcggcggcggaggtcg 224 |||||||||||||||||||||| Sbjct: 101497 gccgtagcggcggcggaggtcg 101518
>ref|XM_953294.1| Neurospora crassa OR74A hypothetical protein (NCU07801.1) partial mRNA Length = 975 Score = 44.1 bits (22), Expect = 0.95 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 gcaagaagcggaagaagcccaagaag 118 ||||||||||||||| |||||||||| Sbjct: 923 gcaagaagcggaagaggcccaagaag 948
>dbj|AK109790.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D07, full insert sequence Length = 1393 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Minus Query: 203 gccgtagcggcggcggaggtcg 224 |||||||||||||||||||||| Sbjct: 230 gccgtagcggcggcggaggtcg 209
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 42.1 bits (21), Expect = 3.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 145 cgcggccgacgagcgggcggtcgagcagg 173 |||||||||||||| ||| |||||||||| Sbjct: 2757030 cgcggccgacgagccggccgtcgagcagg 2757002
>ref|XM_420748.2| PREDICTED: Gallus gallus BH-protocadherin (brain-heart) (PCDH7), mRNA Length = 3792 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 aagaagcccaagaaggacaag 124 ||||||||||||||||||||| Sbjct: 2815 aagaagcccaagaaggacaag 2835
>ref|NM_001059341.1| Oryza sativa (japonica cultivar-group) Os04g0429000 (Os04g0429000) mRNA, complete cds Length = 873 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 cgccgccgcggccgacgagcg 159 ||||||||||||||||||||| Sbjct: 322 cgccgccgcggccgacgagcg 302
>emb|AM180355.1| Clostridium difficile 630 complete genome Length = 4290252 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 gagcaggtgcaggagcaagag 187 ||||||||||||||||||||| Sbjct: 159407 gagcaggtgcaggagcaagag 159427
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 gcggcggcggaggtcggggag 229 ||||||||||||||||||||| Sbjct: 47756 gcggcggcggaggtcggggag 47776
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 cgccgcggccgacgagcgggc 162 ||||||||||||||||||||| Sbjct: 2195908 cgccgcggccgacgagcgggc 2195888
>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940128D9, complete sequence Length = 128585 Score = 42.1 bits (21), Expect = 3.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 ctccggcaacttccgcggcctcgccttcg 389 |||||||||||||| |||||||| ||||| Sbjct: 63500 ctccggcaacttcctcggcctcgacttcg 63528
>gb|AC004932.4| Homo sapiens PAC clone RP5-943F2 from 7, complete sequence Length = 151183 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 934 aacagatacttttgggctgca 954 ||||||||||||||||||||| Sbjct: 97847 aacagatacttttgggctgca 97827
>gb|AE006025.1| Caulobacter crescentus CB15 section 351 of 359 of the complete genome Length = 10596 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 aagaagcccaagaaggacaag 124 ||||||||||||||||||||| Sbjct: 5566 aagaagcccaagaaggacaag 5546
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 cgccgccgcggccgacgagcg 159 ||||||||||||||||||||| Sbjct: 71065 cgccgccgcggccgacgagcg 71045
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 gcggcggcggaggtcggggag 229 ||||||||||||||||||||| Sbjct: 28088623 gcggcggcggaggtcggggag 28088643
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 cgccgcggccgacgagcgggc 162 ||||||||||||||||||||| Sbjct: 1630747 cgccgcggccgacgagcgggc 1630767
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 cgccgcggccgacgagcgggc 162 ||||||||||||||||||||| Sbjct: 357603 cgccgcggccgacgagcgggc 357583
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 gccgccgcggccgacgagcgggcgg 164 ||||||||||||||||| ||||||| Sbjct: 19516 gccgccgcggccgacgaccgggcgg 19540
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 agaacagcaagaagcggaaga 107 ||||||||||||||||||||| Sbjct: 2488380 agaacagcaagaagcggaaga 2488360
>emb|CR388971.1| Gallus gallus finished cDNA, clone ChEST328i11 Length = 825 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 aagaagcccaagaaggacaag 124 ||||||||||||||||||||| Sbjct: 220 aagaagcccaagaaggacaag 240
>emb|AJ325931.1|HSA325931 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CP4C Length = 739 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 aaggacaagtggggccagcct 136 ||||||||||||||||||||| Sbjct: 504 aaggacaagtggggccagcct 484 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 159,604,642 Number of extensions: 8543250 Number of successful extensions: 180341 Number of sequences better than 10.0: 40 Number of HSP's gapped: 180339 Number of HSP's successfully gapped: 51 Length of query: 996 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 973 Effective length of database: 18,503,978,556 Effective search space: 18004371134988 Effective search space used: 18004371134988 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
