Clone Name | FLbaf93j07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK242820.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090063M02, full insert sequence Length = 1327 Score = 971 bits (490), Expect = 0.0 Identities = 835/950 (87%) Strand = Plus / Plus Query: 191 cgcctagacgaagacgacaccttcggccgcgacttcaacgcctcgccctctcgcaacgcc 250 ||||| ||||| || ||| |||||||||||||||||||| | || || || | || ||| Sbjct: 175 cgcctggacgaggaggacgccttcggccgcgacttcaactcgtccccttcgcccacagcc 234 Query: 251 gcccccgtccgttccggcgagaagaggcagttcggcgatctggatgacgacgaagacgat 310 | |||| ||| |||||||||||||||| ||||||||||||||| ||||| || || || Sbjct: 235 ccacccgcccgctccggcgagaagaggccgttcggcgatctggacgacgatgacgaggac 294 Query: 311 gtcttcgcttcgaagaagggaaagacaaaggtggaggaaagtgcaccaggtgctgccacg 370 || |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 295 gttttcgcttccaagaagggaaagacaaaggtggaagaaagtgcgccaggtgctgccacg 354 Query: 371 ggaatgattctgtctcttcgtgaaaatttacagacctgcaaagagaatcttgaatcaaac 430 |||||||||||||||||||| || | ||| |||| ||| ||||| ||||||| ||| Sbjct: 355 ggaatgattctgtctcttcgcgagagtttgcagaactgtaaagataatcttgcgtcatgt 414 Query: 431 caggtggaactggaagctgctaaatcagaaatccagaagtggcattcagcatttgagaac 490 |||||||||| ||| ||||| ||||||||| | || |||||||||||||||||| ||||| Sbjct: 415 caggtggaacgggaggctgccaaatcagaagttcaaaagtggcattcagcatttcagaac 474 Query: 491 attcctgctgtacctgcaggaaccaatccagagcctgtttcggtggttacttatcttaat 550 ||||| ||||||||||| |||||||||||||| ||||||||||| ||| ||||||| ||| Sbjct: 475 attccagctgtacctgctggaaccaatccagatcctgtttcggttgtttcttatctcaat 534 Query: 551 aacctgaagtcgtcggaggagtcactgaaggagcagctggagaaagcgaagaaaagagaa 610 ||||||||||||||||| || ||| |||||||||||||||||||||| ||||||||||| Sbjct: 535 aacctgaagtcgtcggaagaatcattgaaggagcagctggagaaagctaagaaaagagag 594 Query: 611 gctgcttttattgtaacatttgcaaaacgagaacaagagattgcggaattgaagtctgca 670 || ||||| |||||||||||||| ||||| |||||||| ||||| ||| ||||||||||| Sbjct: 595 gcggctttcattgtaacatttgcgaaacgtgaacaagaaattgcagaactgaagtctgca 654 Query: 671 gttagggacttgaaaacacaattgaggccaccatcaatgcagacgagacgattattgctt 730 |||||||| |||||||| ||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 655 gttagggatttgaaaactcaattaaggccaccatcgatgcagacaaggagattattgctt 714 Query: 731 gatccagcaatccacgaggaatttacgcgcttaaagaatctggctgaagagaaagagaaa 790 |||||||||||||||||||||||||| || ||||||||||| | || ||||| |||||| Sbjct: 715 gatccagcaatccacgaggaatttacacgattaaagaatcttgtggaggagaaggagaaa 774 Query: 791 aagataaaagagctgcaggaaaatgttgctgctgtcaattttactccatccagcaagcat 850 ||||| || || || ||||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 775 aagatcaaggaactacaggacaatgttgctgctgtcaattttactccatccagtaaacat 834 Query: 851 gggaagatgctaatggccaagtgtaggacattgcaagaggaaaatgaagaaattggggca 910 ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 835 gggaaaatgctaatggccaagtgtagaacattgcaagaggaaaatgaagagattggggcg 894 Query: 911 atggcttctgaaggaaaaatccatgaacttggaatgaaaattgcagttctgaagacccag 970 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | Sbjct: 895 atggcttctgaaggaaaaatccatgaacttggaatgaaaattgcagttttgaagactcgg 954 Query: 971 aacaatgagctcaggaatcagttcgatgggctgtacaaacacatggatggcctaacaaac 1030 |||||||| ||||||||||||||| ||| |||||| |||||||||||||| |||||||| Sbjct: 955 aacaatgaactcaggaatcagttcaatgagctgtataaacacatggatggtctaacaaat 1014 Query: 1031 gatgttgagaggtcaaatgaaatggtttccattctgcaagaggaattagaagctaaagat 1090 || ||||| || |||||||||||||| ||||||| ||||| || |||||| | |||||| Sbjct: 1015 gacgttgaaagatcaaatgaaatggtggccattcttcaagatgagttagaaacaaaagat 1074 Query: 1091 gtggagctggcaaggttaaaggagatgctttcacagaaagaggcaactga 1140 || |||||| ||| || |||||||||||| | |||||||| |||||||| Sbjct: 1075 gtagagctgagaagattgaaggagatgcttgcccagaaagaagcaactga 1124
>ref|NM_001064165.1| Oryza sativa (japonica cultivar-group) Os06g0474200 (Os06g0474200) mRNA, complete cds Length = 987 Score = 620 bits (313), Expect = e-174 Identities = 496/557 (89%) Strand = Plus / Plus Query: 584 cagctggagaaagcgaagaaaagagaagctgcttttattgtaacatttgcaaaacgagaa 643 |||||||||||||| ||||||||||| || ||||| |||||||||||||| ||||| ||| Sbjct: 343 cagctggagaaagctaagaaaagagaggcggctttcattgtaacatttgcgaaacgtgaa 402 Query: 644 caagagattgcggaattgaagtctgcagttagggacttgaaaacacaattgaggccacca 703 ||||| ||||| ||| ||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 403 caagaaattgcagaactgaagtctgcagttagggatttgaaaactcaattaaggccacca 462 Query: 704 tcaatgcagacgagacgattattgcttgatccagcaatccacgaggaatttacgcgctta 763 || |||||||| || ||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 463 tcgatgcagacaaggagattattgcttgatccagcaatccacgaggaatttacacgatta 522 Query: 764 aagaatctggctgaagagaaagagaaaaagataaaagagctgcaggaaaatgttgctgct 823 |||||||| | || ||||| ||||||||||| || || || ||||| |||||||||||| Sbjct: 523 aagaatcttgtggaggagaaggagaaaaagatcaaggaactacaggacaatgttgctgct 582 Query: 824 gtcaattttactccatccagcaagcatgggaagatgctaatggccaagtgtaggacattg 883 |||||||||||||||||||| || |||||||| |||||||||||||||||||| |||||| Sbjct: 583 gtcaattttactccatccagtaaacatgggaaaatgctaatggccaagtgtagaacattg 642 Query: 884 caagaggaaaatgaagaaattggggcaatggcttctgaaggaaaaatccatgaacttgga 943 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 643 caagaggaaaatgaagagattggggcgatggcttctgaaggaaaaatccatgaacttgga 702 Query: 944 atgaaaattgcagttctgaagacccagaacaatgagctcaggaatcagttcgatgggctg 1003 ||||||||||||||| ||||||| | ||||||||| ||||||||||||||| ||| |||| Sbjct: 703 atgaaaattgcagttttgaagactcggaacaatgaactcaggaatcagttcaatgagctg 762 Query: 1004 tacaaacacatggatggcctaacaaacgatgttgagaggtcaaatgaaatggtttccatt 1063 || |||||||||||||| |||||||| || ||||| || |||||||||||||| ||||| Sbjct: 763 tataaacacatggatggtctaacaaatgacgttgaaagatcaaatgaaatggtggccatt 822 Query: 1064 ctgcaagaggaattagaagctaaagatgtggagctggcaaggttaaaggagatgctttca 1123 || ||||| || |||||| | |||||||| |||||| ||| || |||||||||||| | Sbjct: 823 cttcaagatgagttagaaacaaaagatgtagagctgagaagattgaaggagatgcttgcc 882 Query: 1124 cagaaagaggcaactga 1140 |||||||| |||||||| Sbjct: 883 cagaaagaagcaactga 899 Score = 190 bits (96), Expect = 9e-45 Identities = 174/200 (87%) Strand = Plus / Plus Query: 191 cgcctagacgaagacgacaccttcggccgcgacttcaacgcctcgccctctcgcaacgcc 250 ||||| ||||| || ||| |||||||||||||||||||| | || || || | || ||| Sbjct: 22 cgcctggacgaggaggacgccttcggccgcgacttcaactcgtccccttcgcccacagcc 81 Query: 251 gcccccgtccgttccggcgagaagaggcagttcggcgatctggatgacgacgaagacgat 310 | |||| ||| |||||||||||||||| ||||||||||||||| ||||| || || || Sbjct: 82 ccacccgcccgctccggcgagaagaggccgttcggcgatctggacgacgatgacgaggac 141 Query: 311 gtcttcgcttcgaagaagggaaagacaaaggtggaggaaagtgcaccaggtgctgccacg 370 || |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 142 gttttcgcttccaagaagggaaagacaaaggtggaagaaagtgcgccaggtgctgccacg 201 Query: 371 ggaatgattctgtctcttcg 390 |||||||||||||||||||| Sbjct: 202 ggaatgattctgtctcttcg 221 Score = 109 bits (55), Expect = 3e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 431 caggtggaactggaagctgctaaatcagaaatccagaagtggcattcagcatttgagaac 490 |||||||||| ||| ||||| ||||||||| | || |||||||||||||||||| ||||| Sbjct: 255 caggtggaacgggaggctgccaaatcagaagttcaaaagtggcattcagcatttcagaac 314 Query: 491 attcctgctgtacctgcaggaaccaatccag 521 ||||| ||||||||||| ||||||||||||| Sbjct: 315 attccagctgtacctgctggaaccaatccag 345
>emb|CT836206.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA008F02, full insert sequence Length = 551 Score = 394 bits (199), Expect = e-106 Identities = 301/335 (89%) Strand = Plus / Plus Query: 806 caggaaaatgttgctgctgtcaattttactccatccagcaagcatgggaagatgctaatg 865 ||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 11 caggacaatgttgctgctgtcaattttactccatccagtaaacatgggaaaatgctaatg 70 Query: 866 gccaagtgtaggacattgcaagaggaaaatgaagaaattggggcaatggcttctgaagga 925 ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 71 gccaagtgtagaacattgcaagaggaaaatgaagagattggggcgatggcttctgaagga 130 Query: 926 aaaatccatgaacttggaatgaaaattgcagttctgaagacccagaacaatgagctcagg 985 ||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||||| Sbjct: 131 aaaatccatgaacttggaatgaaaattgcagttttgaagactcggaacaatgaactcagg 190 Query: 986 aatcagttcgatgggctgtacaaacacatggatggcctaacaaacgatgttgagaggtca 1045 ||||||||| ||| |||||| |||||||||||||| |||||||| || ||||| || ||| Sbjct: 191 aatcagttcaatgagctgtataaacacatggatggtctaacaaatgacgttgaaagatca 250 Query: 1046 aatgaaatggtttccattctgcaagaggaattagaagctaaagatgtggagctggcaagg 1105 ||||||||||| ||||||| ||||| || |||||| | |||||||| |||||| ||| Sbjct: 251 aatgaaatggtggccattcttcaagatgagttagaaacaaaagatgtagagctgagaaga 310 Query: 1106 ttaaaggagatgctttcacagaaagaggcaactga 1140 || |||||||||||| | |||||||| |||||||| Sbjct: 311 ttgaaggagatgcttgcccagaaagaagcaactga 345
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 202 bits (102), Expect = 2e-48 Identities = 138/150 (92%) Strand = Plus / Minus Query: 779 gagaaagagaaaaagataaaagagctgcaggaaaatgttgctgctgtcaattttactcca 838 ||||| ||||||||||| || || || ||||| ||||||||||||||||||||||||||| Sbjct: 15650051 gagaaggagaaaaagatcaaggaactacaggacaatgttgctgctgtcaattttactcca 15649992 Query: 839 tccagcaagcatgggaagatgctaatggccaagtgtaggacattgcaagaggaaaatgaa 898 ||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 15649991 tccagtaaacatgggaaaatgctaatggccaagtgtagaacattgcaagaggaaaatgaa 15649932 Query: 899 gaaattggggcaatggcttctgaaggaaaa 928 || |||||||| |||||||||||||||||| Sbjct: 15649931 gagattggggcgatggcttctgaaggaaaa 15649902 Score = 111 bits (56), Expect = 7e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 327 agggaaagacaaaggtggaggaaagtgcaccaggtgctgccacgggaatgattctgtctc 386 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 15653831 agggaaagacaaaggtggaagaaagtgcgccaggtgctgccacgggaatgattctgtctc 15653772 Query: 387 ttcg 390 |||| Sbjct: 15653771 ttcg 15653768 Score = 109 bits (55), Expect = 3e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 431 caggtggaactggaagctgctaaatcagaaatccagaagtggcattcagcatttgagaac 490 |||||||||| ||| ||||| ||||||||| | || |||||||||||||||||| ||||| Sbjct: 15652633 caggtggaacgggaggctgccaaatcagaagttcaaaagtggcattcagcatttcagaac 15652574 Query: 491 attcctgctgtacctgcaggaaccaatccag 521 ||||| ||||||||||| ||||||||||||| Sbjct: 15652573 attccagctgtacctgctggaaccaatccag 15652543 Score = 101 bits (51), Expect = 7e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 929 atccatgaacttggaatgaaaattgcagttctgaagacccagaacaatgagctcaggaat 988 |||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||| Sbjct: 15649486 atccatgaacttggaatgaaaattgcagttttgaagactcggaacaatgaactcaggaat 15649427 Query: 989 cagttcgatgg 999 |||||| |||| Sbjct: 15649426 cagttcaatgg 15649416 Score = 89.7 bits (45), Expect = 3e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 584 cagctggagaaagcgaagaaaagagaagctgcttttattgtaacatttgcaaaacgagaa 643 |||||||||||||| ||||||||||| || ||||| |||||||||||||| ||||| ||| Sbjct: 15652321 cagctggagaaagctaagaaaagagaggcggctttcattgtaacatttgcgaaacgtgaa 15652262 Query: 644 caagagattgcggaattgaag 664 ||||| ||||| ||| ||||| Sbjct: 15652261 caagaaattgcagaactgaag 15652241 Score = 77.8 bits (39), Expect = 1e-10 Identities = 45/47 (95%) Strand = Plus / Minus Query: 720 gattattgcttgatccagcaatccacgaggaatttacgcgcttaaag 766 ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 15650577 gattattgcttgatccagcaatccacgaggaatttacacgattaaag 15650531 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Minus Query: 524 cctgtttcggtggttacttatcttaataacctgaagtcgtcggaggagtcactgaaggag 583 ||||||||||| ||| ||||||| |||||||||||||||||||| || ||| |||||||| Sbjct: 15652464 cctgtttcggttgtttcttatctcaataacctgaagtcgtcggaagaatcattgaaggag 15652405 Query: 584 cag 586 ||| Sbjct: 15652404 cag 15652402 Score = 67.9 bits (34), Expect = 9e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 663 agtctgcagttagggacttgaaaacacaattgaggccaccatcaatgcag 712 |||||||||||||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 15651997 agtctgcagttagggatttgaaaactcaattaaggccaccatcgatgcag 15651948 Score = 65.9 bits (33), Expect = 4e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1000 gctgtacaaacacatggatggcctaacaaacgatgttgagaggtcaaatgaaatggt 1056 |||||| |||||||||||||| |||||||| || ||||| || |||||||||||||| Sbjct: 15645842 gctgtataaacacatggatggtctaacaaatgacgttgaaagatcaaatgaaatggt 15645786 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Minus Query: 266 ggcgagaagaggcagttcggcgatctggatgacgacgaagacgatgtcttcgcttcgaag 325 ||||||||||||| ||||||||||||||| ||||| || || || || |||||||| ||| Sbjct: 15654172 ggcgagaagaggccgttcggcgatctggacgacgatgacgaggacgttttcgcttccaag 15654113 Query: 326 aagg 329 |||| Sbjct: 15654112 aagg 15654109 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 1059 ccattctgcaagaggaattagaagctaaagatgtggagctggcaaggttaaaggagatgc 1118 ||||||| ||||| || |||||| | |||||||| |||||| ||| || |||||||||| Sbjct: 15645443 ccattcttcaagatgagttagaaacaaaagatgtagagctgagaagattgaaggagatgc 15645384 Query: 1119 tttcacagaaagaggcaactga 1140 || | |||||||| |||||||| Sbjct: 15645383 ttgcccagaaagaagcaactga 15645362 Score = 46.1 bits (23), Expect = 0.34 Identities = 35/39 (89%) Strand = Plus / Minus Query: 191 cgcctagacgaagacgacaccttcggccgcgacttcaac 229 ||||| ||||| || ||| |||||||||||||||||||| Sbjct: 15654378 cgcctggacgaggaggacgccttcggccgcgacttcaac 15654340
>dbj|AP003528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0633D04 Length = 159636 Score = 202 bits (102), Expect = 2e-48 Identities = 138/150 (92%) Strand = Plus / Minus Query: 779 gagaaagagaaaaagataaaagagctgcaggaaaatgttgctgctgtcaattttactcca 838 ||||| ||||||||||| || || || ||||| ||||||||||||||||||||||||||| Sbjct: 139384 gagaaggagaaaaagatcaaggaactacaggacaatgttgctgctgtcaattttactcca 139325 Query: 839 tccagcaagcatgggaagatgctaatggccaagtgtaggacattgcaagaggaaaatgaa 898 ||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 139324 tccagtaaacatgggaaaatgctaatggccaagtgtagaacattgcaagaggaaaatgaa 139265 Query: 899 gaaattggggcaatggcttctgaaggaaaa 928 || |||||||| |||||||||||||||||| Sbjct: 139264 gagattggggcgatggcttctgaaggaaaa 139235 Score = 111 bits (56), Expect = 7e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 327 agggaaagacaaaggtggaggaaagtgcaccaggtgctgccacgggaatgattctgtctc 386 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 143164 agggaaagacaaaggtggaagaaagtgcgccaggtgctgccacgggaatgattctgtctc 143105 Query: 387 ttcg 390 |||| Sbjct: 143104 ttcg 143101 Score = 109 bits (55), Expect = 3e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 431 caggtggaactggaagctgctaaatcagaaatccagaagtggcattcagcatttgagaac 490 |||||||||| ||| ||||| ||||||||| | || |||||||||||||||||| ||||| Sbjct: 141966 caggtggaacgggaggctgccaaatcagaagttcaaaagtggcattcagcatttcagaac 141907 Query: 491 attcctgctgtacctgcaggaaccaatccag 521 ||||| ||||||||||| ||||||||||||| Sbjct: 141906 attccagctgtacctgctggaaccaatccag 141876 Score = 101 bits (51), Expect = 7e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 929 atccatgaacttggaatgaaaattgcagttctgaagacccagaacaatgagctcaggaat 988 |||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||| Sbjct: 138819 atccatgaacttggaatgaaaattgcagttttgaagactcggaacaatgaactcaggaat 138760 Query: 989 cagttcgatgg 999 |||||| |||| Sbjct: 138759 cagttcaatgg 138749 Score = 89.7 bits (45), Expect = 3e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 584 cagctggagaaagcgaagaaaagagaagctgcttttattgtaacatttgcaaaacgagaa 643 |||||||||||||| ||||||||||| || ||||| |||||||||||||| ||||| ||| Sbjct: 141654 cagctggagaaagctaagaaaagagaggcggctttcattgtaacatttgcgaaacgtgaa 141595 Query: 644 caagagattgcggaattgaag 664 ||||| ||||| ||| ||||| Sbjct: 141594 caagaaattgcagaactgaag 141574 Score = 77.8 bits (39), Expect = 1e-10 Identities = 45/47 (95%) Strand = Plus / Minus Query: 720 gattattgcttgatccagcaatccacgaggaatttacgcgcttaaag 766 ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 139910 gattattgcttgatccagcaatccacgaggaatttacacgattaaag 139864 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Minus Query: 524 cctgtttcggtggttacttatcttaataacctgaagtcgtcggaggagtcactgaaggag 583 ||||||||||| ||| ||||||| |||||||||||||||||||| || ||| |||||||| Sbjct: 141797 cctgtttcggttgtttcttatctcaataacctgaagtcgtcggaagaatcattgaaggag 141738 Query: 584 cag 586 ||| Sbjct: 141737 cag 141735 Score = 67.9 bits (34), Expect = 9e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 663 agtctgcagttagggacttgaaaacacaattgaggccaccatcaatgcag 712 |||||||||||||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 141330 agtctgcagttagggatttgaaaactcaattaaggccaccatcgatgcag 141281 Score = 65.9 bits (33), Expect = 4e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1000 gctgtacaaacacatggatggcctaacaaacgatgttgagaggtcaaatgaaatggt 1056 |||||| |||||||||||||| |||||||| || ||||| || |||||||||||||| Sbjct: 135175 gctgtataaacacatggatggtctaacaaatgacgttgaaagatcaaatgaaatggt 135119 Score = 63.9 bits (32), Expect = 1e-06 Identities = 56/64 (87%) Strand = Plus / Minus Query: 266 ggcgagaagaggcagttcggcgatctggatgacgacgaagacgatgtcttcgcttcgaag 325 ||||||||||||| ||||||||||||||| ||||| || || || || |||||||| ||| Sbjct: 143505 ggcgagaagaggccgttcggcgatctggacgacgatgacgaggacgttttcgcttccaag 143446 Query: 326 aagg 329 |||| Sbjct: 143445 aagg 143442 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 1059 ccattctgcaagaggaattagaagctaaagatgtggagctggcaaggttaaaggagatgc 1118 ||||||| ||||| || |||||| | |||||||| |||||| ||| || |||||||||| Sbjct: 134776 ccattcttcaagatgagttagaaacaaaagatgtagagctgagaagattgaaggagatgc 134717 Query: 1119 tttcacagaaagaggcaactga 1140 || | |||||||| |||||||| Sbjct: 134716 ttgcccagaaagaagcaactga 134695 Score = 46.1 bits (23), Expect = 0.34 Identities = 35/39 (89%) Strand = Plus / Minus Query: 191 cgcctagacgaagacgacaccttcggccgcgacttcaac 229 ||||| ||||| || ||| |||||||||||||||||||| Sbjct: 143711 cgcctggacgaggaggacgccttcggccgcgacttcaac 143673
>gb|AY109211.1| Zea mays PCO144972 mRNA sequence Length = 685 Score = 172 bits (87), Expect = 2e-39 Identities = 195/231 (84%) Strand = Plus / Plus Query: 331 aaagacaaaggtggaggaaagtgcaccaggtgctgccacgggaatgattctgtctcttcg 390 ||||| |||||| ||||||||||||||||| ||||| || ||| |||||||||||||||| Sbjct: 452 aaagataaaggtcgaggaaagtgcaccaggagctgcgacaggagtgattctgtctcttcg 511 Query: 391 tgaaaatttacagacctgcaaagagaatcttgaatcaaaccaggtggaactggaagctgc 450 ||||| ||||||| ||| ||| | | |||| ||| |||||||||||| |||||||| Sbjct: 512 tgaaagtttacaggactgtaaacaaagccttgcatcctgccaggtggaacttgaagctgc 571 Query: 451 taaatcagaaatccagaagtggcattcagcatttgagaacattcctgctgtacctgcagg 510 ||||||||||| |||||||||||||||||||| ||| |||||| ||||||||| | || Sbjct: 572 aaaatcagaaattgagaagtggcattcagcatttcagagcattccagctgtaccttctgg 631 Query: 511 aaccaatccagagcctgtttcggtggttacttatcttaataacctgaagtc 561 |||| |||||| |||||||| ||||| |||| || | |||||||||||| Sbjct: 632 taccagtccagatcctgtttcagtggtatcttacctcagtaacctgaagtc 682
>gb|AY110702.1| Zea mays CL30465_1 mRNA sequence Length = 574 Score = 117 bits (59), Expect = 1e-22 Identities = 166/202 (82%) Strand = Plus / Minus Query: 882 tgcaagaggaaaatgaagaaattggggcaatggcttctgaaggaaaaatccatgaacttg 941 ||||||||||||| ||||| |||||||| ||||| || ||||||| ||||||||| || | Sbjct: 521 tgcaagaggaaaacgaagagattggggcgatggcatcggaaggaanaatccatgagctcg 462 Query: 942 gaatgaaaattgcagttctgaagacccagaacaatgagctcaggaatcagttcgatgggc 1001 | |||||||| || ||||||||| | |||||||| |||||| ||||||| ||||||| Sbjct: 461 ggatgaaaatcgccgttctgaagtcgcagaacaacgagctccggaatcaattcgatgttt 402 Query: 1002 tgtacaaacacatggatggcctaacaaacgatgttgagaggtcaaatgaaatggtttcca 1061 |||| || |||||||| ||| | || || || || ||||| ||||| ||| |||| ||| Sbjct: 401 tgtataagcacatggacggcgtgacgaatgacgtggagagatcaaacgaactggtggcca 342 Query: 1062 ttctgcaagaggaattagaagc 1083 | ||||||||||| ||||||| Sbjct: 341 tcctgcaagaggagctagaagc 320
>ref|NM_115277.3| Arabidopsis thaliana ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37) (ATFIP37) mRNA, complete cds Length = 1213 Score = 52.0 bits (26), Expect = 0.006 Identities = 56/66 (84%) Strand = Plus / Plus Query: 842 agcaagcatgggaagatgctaatggccaagtgtaggacattgcaagaggaaaatgaagaa 901 |||||| |||| |||||||| ||||| ||||| || || |||||||||||||||| || Sbjct: 722 agcaagaatggaaagatgcttatggcaaagtgcagaaccctgcaagaggaaaatgaggag 781 Query: 902 attggg 907 |||||| Sbjct: 782 attggg 787 Score = 48.1 bits (24), Expect = 0.086 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1001 ctgtacaaacacatggatggcctaacaaacgatgttgagaggtcaaatgaaa 1052 ||||||||||||||||| | |||| || ||||||||||| |||||||||| Sbjct: 881 ctgtacaaacacatggaggaattaactaatgatgttgagagatcaaatgaaa 932
>gb|AY113943.1| Arabidopsis thaliana putative FKBP12 interacting protein FIP37 (At3g54170) mRNA, complete cds Length = 1024 Score = 52.0 bits (26), Expect = 0.006 Identities = 56/66 (84%) Strand = Plus / Plus Query: 842 agcaagcatgggaagatgctaatggccaagtgtaggacattgcaagaggaaaatgaagaa 901 |||||| |||| |||||||| ||||| ||||| || || |||||||||||||||| || Sbjct: 625 agcaagaatggaaagatgcttatggcaaagtgcagaaccctgcaagaggaaaatgaggag 684 Query: 902 attggg 907 |||||| Sbjct: 685 attggg 690 Score = 48.1 bits (24), Expect = 0.086 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1001 ctgtacaaacacatggatggcctaacaaacgatgttgagaggtcaaatgaaa 1052 ||||||||||||||||| | |||| || ||||||||||| |||||||||| Sbjct: 784 ctgtacaaacacatggaggaattaactaatgatgttgagagatcaaatgaaa 835
>gb|AY063940.1| Arabidopsis thaliana putative FKBP12 interacting protein FIP37 (At3g54170) mRNA, complete cds Length = 1196 Score = 52.0 bits (26), Expect = 0.006 Identities = 56/66 (84%) Strand = Plus / Plus Query: 842 agcaagcatgggaagatgctaatggccaagtgtaggacattgcaagaggaaaatgaagaa 901 |||||| |||| |||||||| ||||| ||||| || || |||||||||||||||| || Sbjct: 716 agcaagaatggaaagatgcttatggcaaagtgcagaaccctgcaagaggaaaatgaggag 775 Query: 902 attggg 907 |||||| Sbjct: 776 attggg 781 Score = 48.1 bits (24), Expect = 0.086 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1001 ctgtacaaacacatggatggcctaacaaacgatgttgagaggtcaaatgaaa 1052 ||||||||||||||||| | |||| || ||||||||||| |||||||||| Sbjct: 875 ctgtacaaacacatggaggaattaactaatgatgttgagagatcaaatgaaa 926
>gb|AF084570.1|AF084570 Arabidopsis thaliana FKBP12 interacting protein (FIP37) mRNA, complete cds Length = 1160 Score = 52.0 bits (26), Expect = 0.006 Identities = 56/66 (84%) Strand = Plus / Plus Query: 842 agcaagcatgggaagatgctaatggccaagtgtaggacattgcaagaggaaaatgaagaa 901 |||||| |||| |||||||| ||||| ||||| || || |||||||||||||||| || Sbjct: 691 agcaagaatggaaagatgcttatggcaaagtgcagaaccctgcaagaggaaaatgaggag 750 Query: 902 attggg 907 |||||| Sbjct: 751 attggg 756 Score = 48.1 bits (24), Expect = 0.086 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1001 ctgtacaaacacatggatggcctaacaaacgatgttgagaggtcaaatgaaa 1052 ||||||||||||||||| | |||| || ||||||||||| |||||||||| Sbjct: 850 ctgtacaaacacatggaggaattaactaatgatgttgagagatcaaatgaaa 901
>emb|AL132957.1|ATF24B22 Arabidopsis thaliana DNA chromosome 3, BAC clone F24B22 Length = 100285 Score = 52.0 bits (26), Expect = 0.006 Identities = 56/66 (84%) Strand = Plus / Plus Query: 842 agcaagcatgggaagatgctaatggccaagtgtaggacattgcaagaggaaaatgaagaa 901 |||||| |||| |||||||| ||||| ||||| || || |||||||||||||||| || Sbjct: 43800 agcaagaatggaaagatgcttatggcaaagtgcagaaccctgcaagaggaaaatgaggag 43859 Query: 902 attggg 907 |||||| Sbjct: 43860 attggg 43865 Score = 48.1 bits (24), Expect = 0.086 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1001 ctgtacaaacacatggatggcctaacaaacgatgttgagaggtcaaatgaaa 1052 ||||||||||||||||| | |||| || ||||||||||| |||||||||| Sbjct: 44187 ctgtacaaacacatggaggaattaactaatgatgttgagagatcaaatgaaa 44238
>emb|BX823922.1|CNS0A5BB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 671 Score = 52.0 bits (26), Expect = 0.006 Identities = 56/66 (84%) Strand = Plus / Plus Query: 842 agcaagcatgggaagatgctaatggccaagtgtaggacattgcaagaggaaaatgaagaa 901 |||||| |||| |||||||| ||||| ||||| || || |||||||||||||||| || Sbjct: 180 agcaagaatggaaagatgcttatggcaaagtgcagaaccctgcaagaggaaaatgaggag 239 Query: 902 attggg 907 |||||| Sbjct: 240 attggg 245 Score = 48.1 bits (24), Expect = 0.086 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1001 ctgtacaaacacatggatggcctaacaaacgatgttgagaggtcaaatgaaa 1052 ||||||||||||||||| | |||| || ||||||||||| |||||||||| Sbjct: 339 ctgtacaaacacatggaggaattaactaatgatgttgagagatcaaatgaaa 390
>dbj|AP006363.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34B12, TM0147b, complete sequence Length = 56052 Score = 50.1 bits (25), Expect = 0.022 Identities = 28/29 (96%) Strand = Plus / Plus Query: 763 aaagaatctggctgaagagaaagagaaaa 791 ||||||| ||||||||||||||||||||| Sbjct: 41525 aaagaatgtggctgaagagaaagagaaaa 41553
>ref|XM_001015731.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00078900) mRNA, complete cds Length = 2904 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 775 tgaagagaaagagaaaaagataaaaga 801 ||||||| ||||||||||||||||||| Sbjct: 429 tgaagagcaagagaaaaagataaaaga 455
>ref|XM_001177464.1| PREDICTED: Strongylocentrotus purpuratus similar to Low-density lipoprotein receptor-related protein 4 precursor (Multiple epidermal growth factor-like domains 7) (LOC580322), mRNA Length = 4536 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Plus Query: 773 gctgaagagaaagagaaaaagat 795 ||||||||||||||||||||||| Sbjct: 676 gctgaagagaaagagaaaaagat 698
>ref|XM_780389.2| PREDICTED: Strongylocentrotus purpuratus similar to Low-density lipoprotein receptor-related protein 4 precursor (Multiple epidermal growth factor-like domains 7) (LOC580322), mRNA Length = 4536 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Plus Query: 773 gctgaagagaaagagaaaaagat 795 ||||||||||||||||||||||| Sbjct: 676 gctgaagagaaagagaaaaagat 698
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Minus Query: 296 gacgacgaagacgatgtcttcgc 318 ||||||||||||||||||||||| Sbjct: 1106731 gacgacgaagacgatgtcttcgc 1106709
>gb|AY439181.1| Drosophila subobscura troponin I-b2 (TpnI) mRNA, complete cds, alternatively spliced Length = 677 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 776 gaagagaaagagaaaaagataaaaga 801 |||||||| ||||||||||||||||| Sbjct: 563 gaagagaaggagaaaaagataaaaga 588
>gb|AY439180.1| Drosophila subobscura troponin I-b1 (TpnI) mRNA, complete cds, alternatively spliced Length = 881 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 776 gaagagaaagagaaaaagataaaaga 801 |||||||| ||||||||||||||||| Sbjct: 767 gaagagaaggagaaaaagataaaaga 792
>gb|AC150651.3| Bos taurus BAC CH240-451E16 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 174648 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 799 agagctgcaggaaaatgttgct 820 |||||||||||||||||||||| Sbjct: 12168 agagctgcaggaaaatgttgct 12189
>gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, complete sequence Length = 208211 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 924 gaaaaatccatgaacttggaat 945 |||||||||||||||||||||| Sbjct: 46206 gaaaaatccatgaacttggaat 46185
>gb|AC116995.3| Mus musculus BAC clone RP23-3C16 from 1, complete sequence Length = 173131 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 777 aagagaaagagaaaaagataaaagag 802 |||||||||||||||||| ||||||| Sbjct: 1860 aagagaaagagaaaaagaaaaaagag 1885
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 631 tgcaaaacgagaacaagagatt 652 |||||||||||||||||||||| Sbjct: 8760056 tgcaaaacgagaacaagagatt 8760077
>gb|AC166977.6| Mus musculus chromosome 1, clone RP24-291A4, complete sequence Length = 151589 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 777 aagagaaagagaaaaagataaaagag 802 |||||||||||||||||| ||||||| Sbjct: 135742 aagagaaagagaaaaagaaaaaagag 135767
>gb|AC153652.3| Mus musculus BAC clone RP24-89C18 from chromosome 1, complete sequence Length = 168628 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 777 aagagaaagagaaaaagataaaagag 802 |||||||||||||||||| ||||||| Sbjct: 125689 aagagaaagagaaaaagaaaaaagag 125664
>ref|XM_651616.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (9.t00018) partial mRNA Length = 1128 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 777 aagagaaagagaaaaagataaaagag 802 |||||||||||||||||| ||||||| Sbjct: 1055 aagagaaagagaaaaagaaaaaagag 1080
>emb|AL662961.3|OSJN00164 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028M15, complete sequence Length = 187330 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 631 tgcaaaacgagaacaagagatt 652 |||||||||||||||||||||| Sbjct: 102595 tgcaaaacgagaacaagagatt 102616
>gb|AC105042.7| Homo sapiens chromosome 18, clone CTD-2544E12, complete sequence Length = 159505 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 777 aagagaaagagaaaaagataaaagag 802 |||||||||||||||||| ||||||| Sbjct: 35299 aagagaaagagaaaaagagaaaagag 35274
>gb|AC131683.4| Mus musculus BAC clone RP23-359C21 from 16, complete sequence Length = 200615 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 777 aagagaaagagaaaaagataaaagag 802 |||||||||||||||||| ||||||| Sbjct: 17411 aagagaaagagaaaaagagaaaagag 17436
>gb|AC187297.12| Canis Familiaris chromosome 18, clone XX-88E9, complete sequence Length = 203357 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 777 aagagaaagagaaaaagataaaaga 801 |||||||||||||||||| |||||| Sbjct: 130061 aagagaaagagaaaaagaaaaaaga 130085
>emb|CT954302.6| N.leucogenys DNA sequence from clone CH271-262E11, complete sequence Length = 195471 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 778 agagaaagagaaaaagataaa 798 ||||||||||||||||||||| Sbjct: 136739 agagaaagagaaaaagataaa 136719
>gb|AC183570.10| Canis Familiaris chromosome 2, clone XX-217G9, complete sequence Length = 174032 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 777 aagagaaagagaaaaagataaaaga 801 |||||||||||||||||| |||||| Sbjct: 69393 aagagaaagagaaaaagaaaaaaga 69417
>gb|CP000388.1| Pseudoalteromonas atlantica T6c, complete genome Length = 5187005 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 776 gaagagaaagagaaaaagataaaag 800 ||||||||||||||||||| ||||| Sbjct: 940551 gaagagaaagagaaaaagaaaaaag 940527
>ref|NM_001041940.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU08_2050) partial mRNA Length = 1401 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 agaaagcgaagaaaagagaag 611 ||||||||||||||||||||| Sbjct: 1268 agaaagcgaagaaaagagaag 1288
>gb|AC159008.2| Mus musculus BAC clone RP23-14E14 from chromosome 7, complete sequence Length = 239149 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 943 aatgaaaattgcagttctgaa 963 ||||||||||||||||||||| Sbjct: 40228 aatgaaaattgcagttctgaa 40208
>gb|AC161220.5| Mus musculus chromosome 5, clone RP23-9G1, complete sequence Length = 205791 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 778 agagaaagagaaaaagataaa 798 ||||||||||||||||||||| Sbjct: 137560 agagaaagagaaaaagataaa 137540
>gb|AY488597.1| Zacco pachycephalus microsatellite ZT20B sequence Length = 166 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 778 agagaaagagaaaaagataaaagag 802 ||||||||||||||| ||||||||| Sbjct: 109 agagaaagagaaaaatataaaagag 133
>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence Length = 222869 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 777 aagagaaagagaaaaagataaaaga 801 |||||||||||||||||| |||||| Sbjct: 147625 aagagaaagagaaaaagaaaaaaga 147649
>gb|BC073528.1| Xenopus laevis MGC82787 protein, mRNA (cDNA clone MGC:82787 IMAGE:5435288), complete cds Length = 3458 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 786 agaaaaagataaaagagctgcagga 810 |||||||||||||||| |||||||| Sbjct: 1595 agaaaaagataaaagaactgcagga 1619
>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence Length = 242229 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 778 agagaaagagaaaaagataaaagag 802 ||||||||||||||||| ||||||| Sbjct: 125510 agagaaagagaaaaagaaaaaagag 125486
>gb|AC152938.3| Mus musculus BAC clone RP23-469O12 from chromosome 7, complete sequence Length = 183468 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 943 aatgaaaattgcagttctgaa 963 ||||||||||||||||||||| Sbjct: 171836 aatgaaaattgcagttctgaa 171816
>gb|AC036145.11| Mus musculus chromosome 5, clone RP23-439C22, complete sequence Length = 182228 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 778 agagaaagagaaaaagataaa 798 ||||||||||||||||||||| Sbjct: 41358 agagaaagagaaaaagataaa 41338
>gb|AC098724.3| Mus musculus BAC clone RP23-3D14 from 4, complete sequence Length = 190437 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 777 aagagaaagagaaaaagataaaaga 801 |||||||||||||||||| |||||| Sbjct: 90038 aagagaaagagaaaaagaaaaaaga 90062
>dbj|AK123146.1| Homo sapiens cDNA FLJ41151 fis, clone BRACE2038271 Length = 2472 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 778 agagaaagagaaaaagataaaagag 802 ||||||||||||||||| ||||||| Sbjct: 1805 agagaaagagaaaaagagaaaagag 1781
>gb|AC135204.3| Rattus norvegicus 1 BAC CH230-381D2 (Children's Hospital Oakland Research Institute) complete sequence Length = 183322 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 940 tggaatgaaaattgcagttct 960 ||||||||||||||||||||| Sbjct: 62881 tggaatgaaaattgcagttct 62901
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 777 aagagaaagagaaaaagataa 797 ||||||||||||||||||||| Sbjct: 2594020 aagagaaagagaaaaagataa 2594000
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 777 aagagaaagagaaaaagataa 797 ||||||||||||||||||||| Sbjct: 2523701 aagagaaagagaaaaagataa 2523681
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 777 aagagaaagagaaaaagataa 797 ||||||||||||||||||||| Sbjct: 2534366 aagagaaagagaaaaagataa 2534346
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 777 aagagaaagagaaaaagataa 797 ||||||||||||||||||||| Sbjct: 2587262 aagagaaagagaaaaagataa 2587242
>emb|AL445528.16| Human DNA sequence from clone RP11-419N10 on chromosome 1 Contains the APCS gene for serum amyloid P component, the OR10J6P locus for olfactory receptor family 10 subfamily J member 6 pseudogene, a pentraxin-related C-reactive protein (CRP) pseudogene, the CRP gene for pentraxin-related C-reactive protein and a ribosomal protein L27 (RPL27) pseudogene, complete sequence Length = 195274 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 779 gagaaagagaaaaagataaaa 799 ||||||||||||||||||||| Sbjct: 110851 gagaaagagaaaaagataaaa 110831
>emb|AL138962.16| Human DNA sequence from clone RP11-279N8 on chromosome 13 Contains two novel genes, complete sequence Length = 124518 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 778 agagaaagagaaaaagataaaagag 802 ||||||||||||||||| ||||||| Sbjct: 123694 agagaaagagaaaaagagaaaagag 123718
>gb|AC160341.2| Mus musculus BAC clone RP24-226P13 from chromosome 9, complete sequence Length = 139613 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 778 agagaaagagaaaaagataaaagag 802 ||||||||||||||||| ||||||| Sbjct: 113336 agagaaagagaaaaagaaaaaagag 113360
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 777 aagagaaagagaaaaagataa 797 ||||||||||||||||||||| Sbjct: 2515456 aagagaaagagaaaaagataa 2515436
>emb|AL590605.1|SPAPB1E7 S.pombe chromosome I BAC pB1E7 Length = 41788 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 782 aaagagaaaaagataaaagag 802 ||||||||||||||||||||| Sbjct: 19565 aaagagaaaaagataaaagag 19545
>emb|AL590448.1|CNS07EGF chromosome VIII of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 238147 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 agaaagcgaagaaaagagaag 611 ||||||||||||||||||||| Sbjct: 223925 agaaagcgaagaaaagagaag 223905
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 777 aagagaaagagaaaaagataa 797 ||||||||||||||||||||| Sbjct: 2536288 aagagaaagagaaaaagataa 2536268
>gb|AC021150.9| Homo sapiens BAC clone RP11-477D13 from 2, complete sequence Length = 85748 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 gaagggaaagacaaaggtgga 345 ||||||||||||||||||||| Sbjct: 78909 gaagggaaagacaaaggtgga 78889
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 777 aagagaaagagaaaaagataa 797 ||||||||||||||||||||| Sbjct: 2522826 aagagaaagagaaaaagataa 2522806
>gb|AC074091.6| Homo sapiens BAC clone RP11-158I13 from 2, complete sequence Length = 204153 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 778 agagaaagagaaaaagataaa 798 ||||||||||||||||||||| Sbjct: 137323 agagaaagagaaaaagataaa 137303
>gb|AC073069.6| Homo sapiens BAC clone RP11-173N21 from 2, complete sequence Length = 85787 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 723 tattgcttgatccagcaatcc 743 ||||||||||||||||||||| Sbjct: 72226 tattgcttgatccagcaatcc 72206
>dbj|BS000203.1| Pan troglodytes chromosome 22 clone:PTB-155H17, map 22, complete sequences Length = 196470 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 892 aaatgaagaaattggggcaat 912 ||||||||||||||||||||| Sbjct: 135448 aaatgaagaaattggggcaat 135468
>dbj|AK119750.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-E12, full insert sequence Length = 3788 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 903 ttggggcaatggcttctgaag 923 ||||||||||||||||||||| Sbjct: 2752 ttggggcaatggcttctgaag 2772
>dbj|AK130327.1| Homo sapiens cDNA FLJ26817 fis, clone PRS06446 Length = 1931 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 778 agagaaagagaaaaagataaa 798 ||||||||||||||||||||| Sbjct: 1597 agagaaagagaaaaagataaa 1577
>gb|AC158683.2| Mus musculus 6 BAC RP23-328P16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203488 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 774 ctgaagagaaagagaaaaaga 794 ||||||||||||||||||||| Sbjct: 9665 ctgaagagaaagagaaaaaga 9645
>dbj|AP001725.1| Homo sapiens genomic DNA, chromosome 21q, section 69/105 Length = 340000 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 892 aaatgaagaaattggggcaat 912 ||||||||||||||||||||| Sbjct: 264939 aaatgaagaaattggggcaat 264959
>emb|AL611982.26| Mouse DNA sequence from clone RP23-348F1 on chromosome 4, complete sequence Length = 171559 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 777 aagagaaagagaaaaagataaaaga 801 |||||||||||||||||| |||||| Sbjct: 25134 aagagaaagagaaaaagaaaaaaga 25158
>gb|AC153888.3| Mus musculus 6 BAC RP23-428L22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse6 BAC Library) complete sequence Length = 178961 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 774 ctgaagagaaagagaaaaaga 794 ||||||||||||||||||||| Sbjct: 151421 ctgaagagaaagagaaaaaga 151401
>gb|AC122116.9| Mus musculus chromosome 7, clone RP23-449M8, complete sequence Length = 173990 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 777 aagagaaagagaaaaagataaaaga 801 |||||||||||||||||| |||||| Sbjct: 133673 aagagaaagagaaaaagaaaaaaga 133697
>dbj|AP000692.1| Homo sapiens genomic DNA, chromosome 21q22.2, PAC clone:P24J14, CBR1-HLCS region Length = 102714 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 892 aaatgaagaaattggggcaat 912 ||||||||||||||||||||| Sbjct: 97500 aaatgaagaaattggggcaat 97520 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 264,633,616 Number of extensions: 15423328 Number of successful extensions: 375711 Number of sequences better than 10.0: 70 Number of HSP's gapped: 375710 Number of HSP's successfully gapped: 103 Length of query: 1400 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1377 Effective length of database: 18,503,978,556 Effective search space: 25479978471612 Effective search space used: 25479978471612 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)