Clone Name | FLbaf90i17 |
---|---|
Clone Library Name | barley_pub |
>AK065957:Os04g0528100 | Length = 127 Score = 109 bits (272), Expect = 2e-24 Identities = 55/76 (72%), Positives = 56/76 (73%) Frame = +3 Query: 222 CFNPFGDERILREALKEPVAFMGGVFAGLLRLDLNEDPLKEWVTRTVXXXXXXXXXXXXX 401 CFNP GDERILREALKEPVAFMGGVFAGLLRLDLNEDPLKEW+TRTV Sbjct: 52 CFNPPGDERILREALKEPVAFMGGVFAGLLRLDLNEDPLKEWITRTVEASGVAEDSRTDE 111 Query: 402 XXXXXQNDGPQQIEIE 449 QND PQQIEIE Sbjct: 112 SSEGSQNDAPQQIEIE 127
>Os05g0293200:Os05g0293200 | Length = 1496 Score = 32.3 bits (72), Expect = 0.25 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -3 Query: 348 PTP*EDPHSGQALRDQQTHHP*MQLA-PSGPPGGCVRPRKD*SML---ARHPPPLPFPSA 181 PTP P SG A R P + A P+ PP P + A H P P P + Sbjct: 969 PTPIGRPRSGPAARAAPAAGPAVGAARPTVPPSPLAEPTTSSAPAPEPAAHEPASPGPLS 1028 Query: 180 AAEQPHRESSSRKP 139 A P S++R+P Sbjct: 1029 ARSPPSARSTARRP 1042
>AK072268:Os03g0726300 | Length = 743 Score = 30.4 bits (67), Expect = 0.96 Identities = 15/36 (41%), Positives = 23/36 (63%) Frame = +2 Query: 449 VRCISCLLPSFTALLVTYPEYL*YLSSKMLAHILGS 556 V C++ + + +A ++ Y EY Y+S K LAHI GS Sbjct: 147 VHCVALYVITISACILLYYEYK-YISRKRLAHITGS 181
>AK059852:Os03g0685100 | Length = 340 Score = 30.4 bits (67), Expect = 0.96 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -3 Query: 222 MLARHPPPLPFPSAAAEQPHRESSSR 145 +LAR PPP PSA + P RES R Sbjct: 2 LLARAPPPPAMPSAVSSPPQRESILR 27
>Os05g0121600:Os05g0121600 | Length = 519 Score = 30.0 bits (66), Expect = 1.3 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = -3 Query: 243 RPRKD*SMLARHPPPLPFPSAAAEQPHRESSSRKPGR 133 RP D +LA PPP P P QP SR+ R Sbjct: 130 RPHPDIRILAHAPPPAPPPPPPQPQPQAAKKSRRGPR 166
>AK120880:Os08g0100500 | Length = 1428 Score = 30.0 bits (66), Expect = 1.3 Identities = 24/68 (35%), Positives = 25/68 (36%), Gaps = 1/68 (1%) Frame = -3 Query: 366 PLPFELPTP*EDPHSGQAL-RDQQTHHP*MQLAPSGPPGGCVRPRKD*SMLARHPPPLPF 190 PLP + P P P L D P L PS PP P L PPP P Sbjct: 1112 PLPLDAPPPPPLPEGPPPLPSDSPPCQP--PLPPSPPPATPPPPPPLSPSLPPPPPPPPL 1169 Query: 189 PSAAAEQP 166 PS QP Sbjct: 1170 PSGPPPQP 1177
>AK109549:Os09g0553300 | Length = 184 Score = 30.0 bits (66), Expect = 1.3 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -3 Query: 222 MLARHPPPLPFPSAAAE--QPHRESSSRKPGRETP 124 +L RHPPPLP ++AA +P R SS+ +P Sbjct: 27 LLLRHPPPLPRAASAASRLRPPRMSSASSSNASSP 61
>AK109496:Os08g0100500 | Length = 379 Score = 30.0 bits (66), Expect = 1.3 Identities = 24/68 (35%), Positives = 25/68 (36%), Gaps = 1/68 (1%) Frame = -3 Query: 366 PLPFELPTP*EDPHSGQAL-RDQQTHHP*MQLAPSGPPGGCVRPRKD*SMLARHPPPLPF 190 PLP + P P P L D P L PS PP P L PPP P Sbjct: 109 PLPLDAPPPPPLPEGPPPLPSDSPPCQP--PLPPSPPPATPPPPPPLSPSLPPPPPPPPL 166 Query: 189 PSAAAEQP 166 PS QP Sbjct: 167 PSGPPPQP 174
>AK109338:Os03g0852400 | Length = 219 Score = 30.0 bits (66), Expect = 1.3 Identities = 24/93 (25%), Positives = 32/93 (34%), Gaps = 10/93 (10%) Frame = -3 Query: 387 SPQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGC----------VRP 238 +P L P LP P P + D++ H LAPS PP P Sbjct: 19 APLLASAESPISLP-PASAPTASTPAADERLHPADAALAPSQPPSEASSSAAALSPPAPP 77 Query: 237 RKD*SMLARHPPPLPFPSAAAEQPHRESSSRKP 139 H PP+P +A P S++ P Sbjct: 78 ETSPLPAPSHSPPVPHSAAPEPSPMEHSAASAP 110
>AK060985:Os03g0852400 | Length = 219 Score = 30.0 bits (66), Expect = 1.3 Identities = 24/93 (25%), Positives = 32/93 (34%), Gaps = 10/93 (10%) Frame = -3 Query: 387 SPQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGC----------VRP 238 +P L P LP P P + D++ H LAPS PP P Sbjct: 19 APLLASAESPISLP-PASAPTASTPAADERLHPADAALAPSQPPSEASSSAAALSPPAPP 77 Query: 237 RKD*SMLARHPPPLPFPSAAAEQPHRESSSRKP 139 H PP+P +A P S++ P Sbjct: 78 ETSPLPAPSHSPPVPHSAAPEPSPMEHSAASAP 110
>AK101943:Os01g0738300 | Length = 671 Score = 29.6 bits (65), Expect = 1.6 Identities = 19/65 (29%), Positives = 25/65 (38%) Frame = -3 Query: 393 HCSPQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGCVRPRKD*SMLA 214 H P+++ P P LP P P + H P AP+ P V P +A Sbjct: 133 HVQPRVYPSPPPPSLPPP--PPQTFSPPSPPPFHPPSSSPAPAPVPAAVVYPPPPPPRIA 190 Query: 213 RHPPP 199 PPP Sbjct: 191 SPPPP 195
>AK065375:Os01g0612700 | Length = 855 Score = 29.6 bits (65), Expect = 1.6 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 9/57 (15%) Frame = -3 Query: 267 SGPPGGCVRPRKD*SMLARHPPPLPF---------PSAAAEQPHRESSSRKPGRETP 124 +GPP D M A HPPPLPF P A P + + P R P Sbjct: 436 AGPPPALELEAMDVDMDAIHPPPLPFDSGVESLQKPLPRAPSPIMQEAPCSPDRAPP 492
>Os03g0717300:Os03g0717300 | Length = 160 Score = 29.3 bits (64), Expect = 2.1 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +1 Query: 49 PWPPTTRPALPRSCSPS 99 P PPT+ PA P SCSPS Sbjct: 90 PPPPTSPPASPSSCSPS 106
>AK110134: | Length = 944 Score = 28.9 bits (63), Expect = 2.8 Identities = 26/103 (25%), Positives = 37/103 (35%) Frame = -3 Query: 447 QSQFAGVHHFELPHLIPRHCSPQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAP 268 Q+ + HH + P + P+H P P P P PH Q QQ H Sbjct: 185 QNNYPHPHHPQNPQMPPQH---HPHPHPHPHPHPHPHPHPHPSQQQHHQQAHW------N 235 Query: 267 SGPPGGCVRPRKD*SMLARHPPPLPFPSAAAEQPHRESSSRKP 139 +GP ++P+ + L+ P PSA H P Sbjct: 236 TGPLPSVLQPQS--APLSSTPSSNRGPSAPPPPQHHTMDRAYP 276
>AK106138:Os10g0577200 | Length = 348 Score = 28.5 bits (62), Expect = 3.6 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Frame = -3 Query: 435 AGVHHFELPHLIPRHCSPQLFQKPLPFELPTP*EDPHSGQAL--RDQQTHHP*MQLAPSG 262 AG+ H + P +PRH PLP P P H + L + QQ P M+L Sbjct: 100 AGLQHQQEP--VPRHSPAAHRGDPLPASPPQPQHQHHPHRPLPPQHQQPKPPSMRLQKIR 157 Query: 261 PP 256 PP Sbjct: 158 PP 159
>AK063702: | Length = 374 Score = 28.1 bits (61), Expect = 4.8 Identities = 24/86 (27%), Positives = 33/86 (38%) Frame = -3 Query: 423 HFELPHLIPRHCSPQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGCV 244 H +P+ +P +PQ P+P +P P R+Q +P P P Sbjct: 216 HVPIPYPVP---TPQAVPVPVPTRVPVP----------REQPVPYPFQ--VPVPVPQPVP 260 Query: 243 RPRKD*SMLARHPPPLPFPSAAAEQP 166 RPR P P+P P A A P Sbjct: 261 RPR---------PVPVPTPCAVAAAP 277
>AK100944:Os01g0211800 | Length = 330 Score = 28.1 bits (61), Expect = 4.8 Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 4/56 (7%) Frame = -3 Query: 441 QFAGVHHFELPHLIPRHCSPQL---FQKPLP-FELPTP*EDPHSGQALRDQQTHHP 286 +F G HH H SP + PLP F LP P Q + QQ H P Sbjct: 17 EFGGGHHHHAAHGHHHQRSPSMGAFLAAPLPPFPLPPPAPANGGAQQQQQQQQHQP 72
>Os07g0539700:Os07g0539700 | Length = 924 Score = 27.7 bits (60), Expect = 6.2 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Frame = -3 Query: 282 MQLAPSGPPGGCVRPRKD*SMLARHPPPLPFPS-AAAEQPHRESSS 148 + L+PS PP C R R+ A P P P+ +P R SS Sbjct: 720 LSLSPSAPPARCARVREG---RAERPSPSALPARVRVSRPRRAESS 762
>Os02g0809100:Os02g0809100 | Length = 585 Score = 27.7 bits (60), Expect = 6.2 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 6/79 (7%) Frame = -3 Query: 384 PQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGCVRPRKD*SML---- 217 P + +P E+P +D H+ + D + ++P PG R + L Sbjct: 333 PPTVKDNVPVEIPAKNDDRHTTNPVSDH------VVVSPVVSPGEFQRQIQGLEKLQFAD 386 Query: 216 --ARHPPPLPFPSAAAEQP 166 A+ PPP P P+ AA P Sbjct: 387 TAAQQPPPPPAPATAAPPP 405
>AK122112:Os01g0761100 | Length = 619 Score = 27.7 bits (60), Expect = 6.2 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Frame = +3 Query: 33 PRGALSMATYY------PSGASALLLPVPRTRAAFPQGFPGP 140 PRG M +++ P A A+ +PVP+ R A PQ P P Sbjct: 89 PRGLPVMRSHHVVHVPLPRPAVAVAVPVPQVRPAQPQPVPRP 130
>AK121820:Os04g0650700 | Length = 185 Score = 27.7 bits (60), Expect = 6.2 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -1 Query: 161 GRAPPGSRAGKPLRKGGAGSRDG 93 G P G R LR+GGAG R G Sbjct: 54 GAVPAGGRGRAALRRGGAGRRGG 76
>AK121011:Os04g0498700 | Length = 508 Score = 27.7 bits (60), Expect = 6.2 Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 2/51 (3%) Frame = -3 Query: 270 PSGPPGGCVRPRKD*SMLARHPP--PLPFPSAAAEQPHRESSSRKPGRETP 124 P PP P K S A PP P P PS P S P TP Sbjct: 95 PQPPPATSPAPTKPSSPPAPKPPSPPAPSPSTTPSSPPAPKPSSPPPAATP 145
>AK119581:Os09g0498600 | Length = 398 Score = 27.7 bits (60), Expect = 6.2 Identities = 15/43 (34%), Positives = 18/43 (41%) Frame = -3 Query: 294 HHP*MQLAPSGPPGGCVRPRKD*SMLARHPPPLPFPSAAAEQP 166 HHP + AP P GG PP P PS A++P Sbjct: 209 HHPRQEPAPPHPTGGM--------------PPYPMPSFRADRP 237
>AK107456:Os08g0101000 | Length = 362 Score = 27.7 bits (60), Expect = 6.2 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = +3 Query: 63 YPSGASALLLPVPRTRAAFPQGFPGPASGRSSP 161 +P ALL V + FP FP P+SG P Sbjct: 14 HPYHYQALLAAVHQQTVPFPNPFPAPSSGAEPP 46
>AK106795:Os01g0132400 | Length = 427 Score = 27.7 bits (60), Expect = 6.2 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -3 Query: 225 SMLARHPPPLPFP-SAAAEQPHRESSSRKPGR 133 S+L PPLP P +AAA ESS R+P R Sbjct: 263 SILREADPPLPAPDAAAAAAAAAESSHREPSR 294
>AK068693:Os04g0650700 | Length = 162 Score = 27.7 bits (60), Expect = 6.2 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -1 Query: 161 GRAPPGSRAGKPLRKGGAGSRDG 93 G P G R LR+GGAG R G Sbjct: 54 GAVPAGGRGRAALRRGGAGRRGG 76
>AK066995:Os09g0498600 | Length = 616 Score = 27.7 bits (60), Expect = 6.2 Identities = 15/43 (34%), Positives = 18/43 (41%) Frame = -3 Query: 294 HHP*MQLAPSGPPGGCVRPRKD*SMLARHPPPLPFPSAAAEQP 166 HHP + AP P GG PP P PS A++P Sbjct: 427 HHPRQEPAPPHPTGGM--------------PPYPMPSFRADRP 455
>AK061502:Os04g0650700 | Length = 159 Score = 27.7 bits (60), Expect = 6.2 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -1 Query: 161 GRAPPGSRAGKPLRKGGAGSRDG 93 G P G R LR+GGAG R G Sbjct: 51 GAVPAGGRGRAALRRGGAGRRGG 73
>AK059661:Os04g0498700 | Length = 508 Score = 27.7 bits (60), Expect = 6.2 Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 2/51 (3%) Frame = -3 Query: 270 PSGPPGGCVRPRKD*SMLARHPP--PLPFPSAAAEQPHRESSSRKPGRETP 124 P PP P K S A PP P P PS P S P TP Sbjct: 95 PQPPPATSPAPTKPSSPPAPKPPSPPAPSPSTTPSSPPAPKPSSPPPAATP 145
>Os02g0768700:Os02g0768700 | Length = 284 Score = 27.3 bits (59), Expect = 8.1 Identities = 17/38 (44%), Positives = 19/38 (50%) Frame = -3 Query: 243 RPRKD*SMLARHPPPLPFPSAAAEQPHRESSSRKPGRE 130 RP+ ARHP P P P AA P +SSR RE Sbjct: 22 RPKPRAGDAARHPAPNPSPPPAAAAP---ASSRSRERE 56
>Os01g0749100:Os01g0749100 | Length = 713 Score = 27.3 bits (59), Expect = 8.1 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -3 Query: 243 RPRKD*SMLARHPPPLP--FPSAAAEQPHRESSSRKP 139 R R+ S+LAR PPPLP +AAA P P Sbjct: 646 RRRRSLSLLARPPPPLPRCAANAAAASPSSPVGGSSP 682
>AK110296: | Length = 772 Score = 27.3 bits (59), Expect = 8.1 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = +3 Query: 39 GALSMATYYPSGASALLLPVPRTRAAFPQGFPGPASGRSS 158 GA+ P + P R + FP G PGP GR + Sbjct: 517 GAIPQMFMAPGQQPMMYPPGARGQMPFPAGMPGPQGGRGA 556
>AK106214:Os07g0599600 | Length = 263 Score = 27.3 bits (59), Expect = 8.1 Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 3/90 (3%) Frame = -3 Query: 423 HFELPH-LIPRHCSPQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGC 247 H E PH ++P P+L P+ ELP E PH A+ + H PP Sbjct: 77 HEEPPHPVVPELPKPELPPHPVVPELPKHEEPPH--PAVVPELPKH-------EEPPHPA 127 Query: 246 VRPRKD*SMLARHP--PPLPFPSAAAEQPH 163 V P HP P LP P A E PH Sbjct: 128 VVPEFPKHEEPPHPAVPELPHP-AVPEIPH 156
>AK105918:Os07g0599600 | Length = 263 Score = 27.3 bits (59), Expect = 8.1 Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 3/90 (3%) Frame = -3 Query: 423 HFELPH-LIPRHCSPQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGC 247 H E PH ++P P+L P+ ELP E PH A+ + H PP Sbjct: 77 HEEPPHPVVPELPKPELPPHPVVPELPKHEEPPH--PAVVPELPKH-------EEPPHPA 127 Query: 246 VRPRKD*SMLARHP--PPLPFPSAAAEQPH 163 V P HP P LP P A E PH Sbjct: 128 VVPEFPKHEEPPHPAVPELPHP-AVPEIPH 156
>AK070771:Os07g0599600 | Length = 263 Score = 27.3 bits (59), Expect = 8.1 Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 3/90 (3%) Frame = -3 Query: 423 HFELPH-LIPRHCSPQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGC 247 H E PH ++P P+L P+ ELP E PH A+ + H PP Sbjct: 77 HEEPPHPVVPELPKPELPPHPVVPELPKHEEPPH--PAVVPELPKH-------EEPPHPA 127 Query: 246 VRPRKD*SMLARHP--PPLPFPSAAAEQPH 163 V P HP P LP P A E PH Sbjct: 128 VVPEFPKHEEPPHPAVPELPHP-AVPEIPH 156 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,787,464 Number of extensions: 408533 Number of successful extensions: 2239 Number of sequences better than 10.0: 35 Number of HSP's gapped: 2205 Number of HSP's successfully gapped: 35 Length of query: 203 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 107 Effective length of database: 11,555,919 Effective search space: 1236483333 Effective search space used: 1236483333 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)