Clone Name | FLbaf90i17 |
---|---|
Clone Library Name | barley_pub |
>Q9FZ89:Y1815_ARATH UPF0426 protein At1g28150, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 123 Score = 84.0 bits (206), Expect = 4e-16 Identities = 44/76 (57%), Positives = 49/76 (64%) Frame = +3 Query: 222 CFNPFGDERILREALKEPVAFMGGVFAGLLRLDLNEDPLKEWVTRTVXXXXXXXXXXXXX 401 CFN E IL EALKEP+AF+GG+FAGLLRLDLNE+PLK+WVTRTV Sbjct: 49 CFN-LPQEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDAD 107 Query: 402 XXXXXQNDGPQQIEIE 449 D PQQIEIE Sbjct: 108 GVVSNDEDSPQQIEIE 123
>P74786:Y294_SYNY3 UPF0426 protein ssl0294 - Synechocystis sp. (strain PCC 6803)| Length = 70 Score = 44.7 bits (104), Expect = 3e-04 Identities = 17/36 (47%), Positives = 27/36 (75%) Frame = +3 Query: 249 ILREALKEPVAFMGGVFAGLLRLDLNEDPLKEWVTR 356 + RE ++P+AF GG +G+LRL L +DPLK+W+ + Sbjct: 9 VTRELCQQPIAFAGGFVSGVLRLKLTDDPLKKWLQK 44
>Q8YQ06:Y4034_ANASP UPF0426 protein asl4034 - Anabaena sp. (strain PCC 7120)| Length = 72 Score = 40.0 bits (92), Expect = 0.007 Identities = 14/36 (38%), Positives = 27/36 (75%) Frame = +3 Query: 249 ILREALKEPVAFMGGVFAGLLRLDLNEDPLKEWVTR 356 I ++ ++ P +F+GG +G+LRL+L +DP+K W+ + Sbjct: 9 IFKQLVQHPASFLGGFASGVLRLNLADDPVKSWLDK 44
>Q9QZA1:PHLA1_RAT Pleckstrin homology-like domain family A member 1 - Rattus| norvegicus (Rat) Length = 263 Score = 35.0 bits (79), Expect = 0.21 Identities = 38/147 (25%), Positives = 52/147 (35%), Gaps = 8/147 (5%) Frame = -3 Query: 543 WASILLLRYYKYSG*VTSKAVKEGKRQLMHLTQSQFAGVHHFELPHLIPRHCSPQLFQKP 364 W + + L+ +Y AVK +++ HL Q Q + P+ PQ+ +P Sbjct: 125 WNAEITLQMVQYKNRQAILAVKSTRQKQQHLVQQQPPQTQQIQ-----PQPQQPQIQPQP 179 Query: 363 ----LPFELPTP*EDPHSGQALRDQQTH---HP*MQLAPSGPPGGCVRPRKD*SMLARHP 205 P P P P Q + QQ H HP L P P P HP Sbjct: 180 QPQIQPQPQPQPQPQPQPQQQPQPQQLHSYPHPHPHLYPHPHPHAHSHPHP-------HP 232 Query: 204 PPLPFPSAAAEQP-HRESSSRKPGRET 127 P P A QP H + + R T Sbjct: 233 HPHPHQLQHAHQPLHSQPQGHRLLRST 259
>P40603:APG_BRANA Anther-specific proline-rich protein APG - Brassica napus (Rape)| Length = 449 Score = 34.3 bits (77), Expect = 0.36 Identities = 31/96 (32%), Positives = 33/96 (34%) Frame = -3 Query: 411 PHLIPRHCSPQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGCVRPRK 232 P P C PQ KP P P P P Q + Q P PS PG P K Sbjct: 18 PAPTPSPCPPQP-PKPQPKPPPAPTPSPCPPQPPKPQPKPPP--APGPSPKPGPSPSPPK 74 Query: 231 D*SMLARHPPPLPFPSAAAEQPHRESSSRKPGRETP 124 A P P P PS P + S KP P Sbjct: 75 PPPSPAPKPVPPPSPSPKPSPPKPPAPSPKPSPPKP 110
>Q62392:PHLA1_MOUSE Pleckstrin homology-like domain family A member 1 - Mus musculus| (Mouse) Length = 261 Score = 32.7 bits (73), Expect = 1.1 Identities = 36/144 (25%), Positives = 51/144 (35%), Gaps = 5/144 (3%) Frame = -3 Query: 543 WASILLLRYYKYSG*VTSKAVKEGKRQLMHLTQSQFAGVHHFE---LPHLIPRHCSPQLF 373 W + + L+ +Y AVK +++ HL Q Q + P + P+ PQ+ Sbjct: 122 WNAEITLQMVQYKNRQAILAVKSTRQKQQHLVQQQPPQTQQIQPQPQPQIQPQP-QPQIQ 180 Query: 372 QKPLPFELPTP*EDPH-SGQALRDQQTHHP*MQLAPSGPPGGCVRPRKD*SMLARHPPPL 196 +P P P P P Q L HP P P P HP P Sbjct: 181 PQPQPQPQPQPQPQPQPQPQQLHSYPHPHPHPYSHPHQHPHPHPHPHP-------HPHPH 233 Query: 195 PFPSAAAEQP-HRESSSRKPGRET 127 P+ A QP H + + R T Sbjct: 234 PYQLQHAHQPLHSQPQGHRLLRST 257
>Q00451:PRF1_SOLLC 36.4 kDa proline-rich protein - Solanum lycopersicum (Tomato)| (Lycopersicon esculentum) Length = 346 Score = 32.3 bits (72), Expect = 1.4 Identities = 26/98 (26%), Positives = 34/98 (34%), Gaps = 6/98 (6%) Frame = -3 Query: 399 PRHCSPQLFQKPLPFELP--TP*EDPHSGQALRDQQTHHP*MQLAPS----GPPGGCVRP 238 P H P K P+ P TP PH + HP + P GP V+P Sbjct: 48 PPHVKPPSTPKQPPYVKPPTTPKHPPHVKPPSTPKHPKHPPQKPCPPPSHHGPKPPIVKP 107 Query: 237 RKD*SMLARHPPPLPFPSAAAEQPHRESSSRKPGRETP 124 HPPP+ P + + P + KP P Sbjct: 108 PHVPRPPIVHPPPIVSPPSTPKPPKTPPFTPKPPSPIP 145
>Q8IN94:OSA_DROME Trithorax group protein osa - Drosophila melanogaster (Fruit fly)| Length = 2716 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Frame = -3 Query: 330 PHSGQALRDQQTHH-P*MQLAPSGPPGGCVRPRKD*SMLARHPPPLPFPSAAAEQPHRE 157 P SG L HH P +Q P PP S P P P PS A+ PH+E Sbjct: 419 PGSGHPLPPASPHHVPPLQQQPPPPPHVSAGGPPPSSSPGHAPSPSPQPSQASPSPHQE 477
>O88902:PTN23_RAT Tyrosine-protein phosphatase non-receptor type 23 - Rattus norvegicus| (Rat) Length = 1499 Score = 32.0 bits (71), Expect = 1.8 Identities = 26/86 (30%), Positives = 31/86 (36%) Frame = -3 Query: 420 FELPHLIPRHCSPQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGCVR 241 F+ PHL P +P + P P+ P G + T H QL P PP Sbjct: 842 FQHPHLFPSQ-APGILTPPPPYPFT-----PQPGVLGQPPPTRHT--QLYPGPPP----- 888 Query: 240 PRKD*SMLARHPPPLPFPSAAAEQPH 163 L H LPFPS PH Sbjct: 889 -----DTLPPHSGALPFPSPGPPHPH 909
>P75330:P30_MYCPN P30 adhesin - Mycoplasma pneumoniae| Length = 274 Score = 32.0 bits (71), Expect = 1.8 Identities = 28/96 (29%), Positives = 35/96 (36%) Frame = -3 Query: 411 PHLIPRHCSPQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGCVRPRK 232 P + PR P P P P P P G A R HP M P PP + PR Sbjct: 177 PGMAPRPGMP-----PHPGMAPRPGFPPQPGMAPRPGMPPHPGMAPRPGFPPQPGMAPRP 231 Query: 231 D*SMLARHPPPLPFPSAAAEQPHRESSSRKPGRETP 124 + HP P P P + + +PG + P Sbjct: 232 G---MPPHPGMAPRPGF----PPQPGMAPRPGMQPP 260
>Q5VSG8:MANEL_HUMAN Glycoprotein endo-alpha-1,2-mannosidase-like protein - Homo sapiens| (Human) Length = 457 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +3 Query: 33 PRGALSMATYYPSGASALLLPVPRTRAAFPQGFPGPASGRSSP 161 P GA + A P+ +A P P R A P G PGPA + P Sbjct: 51 PEGAPAPAARAPAAPAAPPPPPPPPRTADPGGSPGPAPAEAEP 93
>O43312:MTSS1_HUMAN Metastasis suppressor protein 1 - Homo sapiens (Human)| Length = 755 Score = 31.6 bits (70), Expect = 2.3 Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 4/84 (4%) Frame = -3 Query: 363 LPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGCVRPRKD*SMLARHPPPLPFPS 184 LP LP P + P ++ H P GP G P S A PPLP P Sbjct: 626 LPGVLPAPPDGPE------ERGEHSPESPSVGEGPQGVTSMPSSMWSGQASVNPPLPGPK 679 Query: 183 AAAEQPHR----ESSSRKPGRETP 124 + + HR ES + RE P Sbjct: 680 PSIPEEHRQAIPESEAEDQEREPP 703
>P49797:RGS3_RAT Regulator of G-protein signaling 3 - Rattus norvegicus (Rat)| Length = 967 Score = 31.2 bits (69), Expect = 3.1 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Frame = -3 Query: 345 TP*EDPHSGQALRDQQTHHP*MQLAPSG--PPGGCVRPRKD*SMLARHPPPLPFPSAAAE 172 TP +DP Q L Q P +PS PPG + P KD S PP PS+ Sbjct: 423 TPSKDPSPSQELPPGQELPPSKDPSPSQELPPGQELPPSKDPSPSQELPPGQELPSSKNP 482 Query: 171 QPHRE 157 P +E Sbjct: 483 SPSQE 487
>Q58HI1:PELP1_XENLA Proline-, glutamic acid- and leucine-rich protein 1 - Xenopus| laevis (African clawed frog) Length = 1012 Score = 31.2 bits (69), Expect = 3.1 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 2/82 (2%) Frame = -3 Query: 372 QKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLA--PSGPPGGCVRPRKD*SMLARHPPP 199 Q+PLP P P D T P L+ P+ PP + PR ++ PP Sbjct: 584 QRPLPHLAPRP-------SVQSDAPTLRPPAALSTFPAMPPANHLPPRPTVPAMSTEPP- 635 Query: 198 LPFPSAAAEQPHRESSSRKPGR 133 P+A P ES KP R Sbjct: 636 --IPAAVPSPPPEESFGEKPRR 655
>Q7NH85:IF2_GLOVI Translation initiation factor IF-2 - Gloeobacter violaceus| Length = 925 Score = 31.2 bits (69), Expect = 3.1 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = -3 Query: 273 APSGPPGGCVRPRKD*SMLARHPPPLPFPSAAAEQPHRESSSRKPGRETP 124 AP+ P P + P PLP P+A A QP R + P + TP Sbjct: 189 APAAPTSEAAPPEPE-------PTPLPAPAAEAPQPVRPPAPPAPAKPTP 231
>Q02080:MEF2B_HUMAN Myocyte-specific enhancer factor 2B - Homo sapiens (Human)| Length = 365 Score = 30.8 bits (68), Expect = 4.0 Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = -3 Query: 351 LPTP*EDPHS-GQALRDQQTHHP*MQLAPSGPPGGCVRPRKD*SML-ARHPPPLPFPS 184 LP P DP G+AL Q P AP P G V P S L ++ PPPL P+ Sbjct: 147 LPPPGCDPSGLGEALPAQSRPSPFRPAAPKAGPPGLVHPLFSPSHLTSKTPPPLYLPT 204
>Q5T749:KPRP_HUMAN Keratinocyte proline-rich protein - Homo sapiens (Human)| Length = 579 Score = 30.8 bits (68), Expect = 4.0 Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 3/89 (3%) Frame = -3 Query: 411 PHLIPRHCS-PQLFQKPLPFELPTP*ED--PHSGQALRDQQTHHP*MQLAPSGPPGGCVR 241 P +PR S P L+ +PLP PTP P GQ + P L P P C R Sbjct: 420 PRPLPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQC----EIPEPRPCLQPCEHPEPCPR 475 Query: 240 PRKD*SMLARHPPPLPFPSAAAEQPHRES 154 P P PLP P + E P RE+ Sbjct: 476 P---------EPIPLPAPCPSPE-PCRET 494
>P35428:HES1_MOUSE Transcription factor HES-1 - Mus musculus (Mouse)| Length = 282 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = -3 Query: 291 HP*MQLAPSGPPGGCVRPRKD*SMLARHPPPL-PFPSAAAEQP 166 HP +Q P PP G P+ + A PPPL P P AA P Sbjct: 160 HPALQAPPPPPPSGPAGPQH--APFAPPPPPLVPIPGGAAPPP 200
>Q8R1S4:MTSS1_MOUSE Metastasis suppressor protein 1 - Mus musculus (Mouse)| Length = 759 Score = 30.4 bits (67), Expect = 5.2 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 4/84 (4%) Frame = -3 Query: 363 LPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGCVRPRKD*SMLARHPPPLPFPS 184 LP LP+P + P ++ H P A GP G P S A PPLP P Sbjct: 630 LPGVLPSPPDGPE------ERGEHSPESPSAGEGPQGVSNIPSSLWSGQAPVNPPLPGPK 683 Query: 183 AAAEQPHR----ESSSRKPGRETP 124 + + HR ES + R+ P Sbjct: 684 PSIPEEHRQAIPESEAEDQERDPP 707
>Q8WV24:PHLA1_HUMAN Pleckstrin homology-like domain family A member 1 - Homo sapiens| (Human) Length = 259 Score = 30.0 bits (66), Expect = 6.8 Identities = 36/140 (25%), Positives = 49/140 (35%), Gaps = 1/140 (0%) Frame = -3 Query: 543 WASILLLRYYKYSG*VTSKAVKEGKRQLMHLTQSQFAGVHHFELPHLIPRHCSPQLFQKP 364 W + + L+ +Y AVK +++ HL Q Q + P L P+ PQ +P Sbjct: 130 WNAEITLQMVQYKNRQAILAVKSTRQKQQHLVQQQPPSQPQPQ-PQLQPQP-QPQPQPQP 187 Query: 363 LPFELPTP*EDPH-SGQALRDQQTHHP*MQLAPSGPPGGCVRPRKD*SMLARHPPPLPFP 187 P P P P Q L HP P P P HP +P P Sbjct: 188 QPQSQPQPQPQPKPQPQQLHPYPHPHPHPHSHPHSHPHPHPHP---------HPHQIPHP 238 Query: 186 SAAAEQPHRESSSRKPGRET 127 QPH + + R T Sbjct: 239 H---PQPHSQPHGHRLLRST 255
>P16443:DBP_RAT D site-binding protein - Rattus norvegicus (Rat)| Length = 325 Score = 30.0 bits (66), Expect = 6.8 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = -3 Query: 276 LAPSGPPGGCVRPRKD*SMLARHPPPLPFPSAAAEQPHRESSSRKPGRET 127 L PS PP G + P AR P P P P + + R S P R T Sbjct: 128 LPPSPPPPGGLSPAPS---PARTPAPSPGPGSCSSSSPRSSPGHAPARAT 174
>Q60925:DBP_MOUSE D site-binding protein - Mus musculus (Mouse)| Length = 325 Score = 30.0 bits (66), Expect = 6.8 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = -3 Query: 276 LAPSGPPGGCVRPRKD*SMLARHPPPLPFPSAAAEQPHRESSSRKPGRET 127 L PS PP G + P AR P P P P + + R S P R T Sbjct: 128 LPPSPPPPGGLSPAPS---PARTPAPSPGPGSCSSSSPRSSPGHAPARAT 174
>P28704:RXRB_MOUSE Retinoic acid receptor RXR-beta - Mus musculus (Mouse)| Length = 520 Score = 29.6 bits (65), Expect = 8.9 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Frame = -3 Query: 306 DQQTHHP*MQ-LAPSGPPGGCVRPRKD*SMLARHPPPLPFPSAAAEQPHRESSSRKPGRE 130 D + +P Q + PS PPG + P + PPP+P P + P SS PG Sbjct: 81 DSSSPNPLSQGIRPSSPPGPPLTP-------SAPPPPMPPPPLGSPFPVISSSMGSPGLP 133 Query: 129 TP 124 P Sbjct: 134 PP 135
>P16112:PGCA_HUMAN Aggrecan core protein precursor - Homo sapiens (Human)| Length = 2415 Score = 29.6 bits (65), Expect = 8.9 Identities = 23/87 (26%), Positives = 35/87 (40%) Frame = -3 Query: 384 PQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP*MQLAPSGPPGGCVRPRKD*SMLARHP 205 P ++P P E+P P E+P + P ++L PS P ++ P Sbjct: 780 PSASEEPSPSEVPFPSEEPSPSEEPFPSVRPFPSVELFPSEEP-----------FPSKEP 828 Query: 204 PPLPFPSAAAEQPHRESSSRKPGRETP 124 P PS A+E+P+ S E P Sbjct: 829 SPSEEPS-ASEEPYTPSPPEPSWTELP 854
>Q09472:EP300_HUMAN Histone acetyltransferase p300 - Homo sapiens (Human)| Length = 2414 Score = 29.6 bits (65), Expect = 8.9 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 1/93 (1%) Frame = -3 Query: 444 SQFAGVHHFELPHLIPRHCSPQLFQKPLPFELPTP*EDPHSGQALRDQQTHHP-*MQLAP 268 SQ + +H +LP SP P+P PTP P S A + T P + P Sbjct: 812 SQGSHIHCPQLPQPALHQNSPS----PVPSRTPTPHHTPPSIGAQQPPATTIPAPVPTPP 867 Query: 267 SGPPGGCVRPRKD*SMLARHPPPLPFPSAAAEQ 169 + PPG P+ A HPPP P+ Q Sbjct: 868 AMPPG----PQSQ----ALHPPPRQTPTPPTTQ 892 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 97,375,963 Number of extensions: 2094524 Number of successful extensions: 7013 Number of sequences better than 10.0: 25 Number of HSP's gapped: 6966 Number of HSP's successfully gapped: 25 Length of query: 203 Length of database: 100,686,439 Length adjustment: 108 Effective length of query: 95 Effective length of database: 71,062,579 Effective search space: 6750945005 Effective search space used: 6750945005 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)