Clone Name | FLbaf90i17 |
---|---|
Clone Library Name | barley_pub |
>emb|CT828849.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI029K14, full insert sequence Length = 635 Score = 307 bits (155), Expect = 2e-80 Identities = 233/259 (89%) Strand = Plus / Plus Query: 212 cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagga 271 ||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 169 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagga 228 Query: 272 gccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatgagga 331 ||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 229 gccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatgagga 288 Query: 332 tcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggagaacag 391 |||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| | | | Sbjct: 289 tcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggatagccg 348 Query: 392 tgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattgagtg 451 |||| ||||||| ||||||| |||||||||||| ||||| ||||||||||||||||| Sbjct: 349 aaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattgagtg 408 Query: 452 aggtgcattagttgccttt 470 |||||||||||||| |||| Sbjct: 409 aggtgcattagttgacttt 427
>ref|NM_001059908.1| Oryza sativa (japonica cultivar-group) Os04g0528100 (Os04g0528100) mRNA, complete cds Length = 798 Score = 283 bits (143), Expect = 4e-73 Identities = 218/243 (89%) Strand = Plus / Plus Query: 212 cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagga 271 ||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 172 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagga 231 Query: 272 gccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatgagga 331 ||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 232 gccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatgagga 291 Query: 332 tcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggagaacag 391 |||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| | | | Sbjct: 292 tcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggatagccg 351 Query: 392 tgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattgagtg 451 |||| ||||||| ||||||| |||||||||||| ||||| ||||||||||||||||| Sbjct: 352 aaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattgagtg 411 Query: 452 agg 454 ||| Sbjct: 412 agg 414
>dbj|AK065957.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044D08, full insert sequence Length = 800 Score = 283 bits (143), Expect = 4e-73 Identities = 218/243 (89%) Strand = Plus / Plus Query: 212 cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagga 271 ||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 173 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagga 232 Query: 272 gccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatgagga 331 ||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 233 gccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatgagga 292 Query: 332 tcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggagaacag 391 |||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| | | | Sbjct: 293 tcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggatagccg 352 Query: 392 tgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattgagtg 451 |||| ||||||| ||||||| |||||||||||| ||||| ||||||||||||||||| Sbjct: 353 aaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattgagtg 412 Query: 452 agg 454 ||| Sbjct: 413 agg 415
>gb|AY107722.1| Zea mays PCO146241 mRNA sequence Length = 583 Score = 268 bits (135), Expect = 2e-68 Identities = 222/251 (88%) Strand = Plus / Plus Query: 210 gtcgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaag 269 ||||||||||| | |||||| ||| ||||||| || ||||||||||| || ||| | ||| Sbjct: 187 gtcgtgcgagctttcttcaaccctctcggggatgagcgcatcctccgagaagccatcaag 246 Query: 270 gagccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatgag 329 |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 247 gagccagtagcattcatgggtggtgtgtttgctggcctcttgaggcttgacctgaatgag 306 Query: 330 gatcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggagaac 389 |||||||||||||| ||| ||| ||| || || ||||||||||||||||||||||| ||| Sbjct: 307 gatcctctcaaggaatggataagtcggacagtggaggcttctggaatagctgaggaaaac 366 Query: 390 agtgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattgag 449 || | || ||||||| ||||| || ||||||||||| ||| |||||||||||||||||| Sbjct: 367 agctctgaagaatcaagtgaggcagatcaaaatgatgcacctcagcaaattgagattgag 426 Query: 450 tgaggtgcatt 460 ||||||||||| Sbjct: 427 tgaggtgcatt 437 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 491 cttgtaacttatcctgaatat 511 ||||||||||||||||||||| Sbjct: 467 cttgtaacttatcctgaatat 487
>emb|CR855230.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0115K01-H0319F09, complete sequence Length = 189580 Score = 228 bits (115), Expect = 2e-56 Identities = 181/203 (89%) Strand = Plus / Plus Query: 268 aggagccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatg 327 ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| Sbjct: 98447 aggagccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatg 98506 Query: 328 aggatcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggaga 387 |||||||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| | Sbjct: 98507 aggatcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggata 98566 Query: 388 acagtgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattg 447 | | |||| ||||||| ||||||| |||||||||||| ||||| ||||||||||||| Sbjct: 98567 gccgaaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattg 98626 Query: 448 agtgaggtgcattagttgccttt 470 |||||||||||||||||| |||| Sbjct: 98627 agtgaggtgcattagttgacttt 98649 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 212 cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagg 270 ||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 98019 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagg 98077
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 228 bits (115), Expect = 2e-56 Identities = 181/203 (89%) Strand = Plus / Plus Query: 268 aggagccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatg 327 ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| Sbjct: 26361701 aggagccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatg 26361760 Query: 328 aggatcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggaga 387 |||||||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| | Sbjct: 26361761 aggatcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggata 26361820 Query: 388 acagtgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattg 447 | | |||| ||||||| ||||||| |||||||||||| ||||| ||||||||||||| Sbjct: 26361821 gccgaaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattg 26361880 Query: 448 agtgaggtgcattagttgccttt 470 |||||||||||||||||| |||| Sbjct: 26361881 agtgaggtgcattagttgacttt 26361903 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 212 cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagg 270 ||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 26361273 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagg 26361331
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 228 bits (115), Expect = 2e-56 Identities = 181/203 (89%) Strand = Plus / Plus Query: 268 aggagccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatg 327 ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| Sbjct: 138278 aggagccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatg 138337 Query: 328 aggatcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggaga 387 |||||||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| | Sbjct: 138338 aggatcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggata 138397 Query: 388 acagtgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattg 447 | | |||| ||||||| ||||||| |||||||||||| ||||| ||||||||||||| Sbjct: 138398 gccgaaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattg 138457 Query: 448 agtgaggtgcattagttgccttt 470 |||||||||||||||||| |||| Sbjct: 138458 agtgaggtgcattagttgacttt 138480 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 212 cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagg 270 ||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 137850 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagg 137908
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 228 bits (115), Expect = 2e-56 Identities = 181/203 (89%) Strand = Plus / Plus Query: 268 aggagccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatg 327 ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| Sbjct: 2334 aggagccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatg 2393 Query: 328 aggatcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggaga 387 |||||||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| | Sbjct: 2394 aggatcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggata 2453 Query: 388 acagtgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattg 447 | | |||| ||||||| ||||||| |||||||||||| ||||| ||||||||||||| Sbjct: 2454 gccgaaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattg 2513 Query: 448 agtgaggtgcattagttgccttt 470 |||||||||||||||||| |||| Sbjct: 2514 agtgaggtgcattagttgacttt 2536 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 212 cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagg 270 ||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 1906 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagg 1964
>emb|AJ234558.1|HVU234558 Hordeum vulgare genomic DNA fragment; clone MWG0801.uni Length = 335 Score = 198 bits (100), Expect = 2e-47 Identities = 113/116 (97%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 2 aaggtagctcacatttcgctgctcaccgagccctcgaggcgcgctatccatggccaccta 61 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 aaggcagctcgcatttcgctgctcaccgagccctcgaggcgcgctatccatggccaccta 187 Query: 62 ctacccgtccggcgcttccgcgc-tcctgctccccgtcccgcgaacccgcgccgcc 116 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 188 ctacccgtccggcgcttccgcgcttcctgctccccgtcccgcgaacccgcgccgcc 243
>emb|AL158093.8| Human DNA sequence from clone RP5-959I16 on chromosome 20 Contains STSs, GSSs and a CpG island, complete sequence Length = 112674 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 503 cctgaatatttgtaatatctaag 525 ||||||||||||||||||||||| Sbjct: 96495 cctgaatatttgtaatatctaag 96517
>emb|CU137662.1| Medicago truncatula chromosome 5 clone mth2-155l8, COMPLETE SEQUENCE Length = 111929 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 atattttgggttcatagtaca 563 ||||||||||||||||||||| Sbjct: 107798 atattttgggttcatagtaca 107818
>gb|AY730302.1| Mazaea phialanthoides internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 683 Score = 42.1 bits (21), Expect = 2.3 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 124 aggggtttcccggcccggct-tccgggag 151 |||||||||||||||||||| |||||||| Sbjct: 100 aggggtttcccggcccggctctccgggag 72
>gb|AC122725.30| Medicago truncatula clone mth2-4c11, complete sequence Length = 134892 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 atattttgggttcatagtaca 563 ||||||||||||||||||||| Sbjct: 107623 atattttgggttcatagtaca 107603
>gb|AC151424.15| Medicago truncatula clone mth2-101c17, complete sequence Length = 137117 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 gtaacttatcctgaatatttgtaat 518 |||||||||| |||||||||||||| Sbjct: 81933 gtaacttatcatgaatatttgtaat 81957
>gb|AF394547.1| Oryza sativa alpha-expansin OsEXPA7 (EXPA7) gene, complete cds Length = 4985 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 cggcggcagcggaggggaaggggag 198 |||||||||||||||| |||||||| Sbjct: 1114 cggcggcagcggagggaaaggggag 1090
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 cggcggcagcggaggggaaggggag 198 |||||||||||||||| |||||||| Sbjct: 34298553 cggcggcagcggagggaaaggggag 34298577
>emb|BX664730.2| Human DNA sequence from clone RP11-118H15 on chromosome 9 Contains a novel gene, complete sequence Length = 171251 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 atattttgggttcatagtaca 563 ||||||||||||||||||||| Sbjct: 116473 atattttgggttcatagtaca 116453
>emb|AL954685.6| Human DNA sequence from clone RP11-237M21 on chromosome 9, complete sequence Length = 130124 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 atattttgggttcatagtaca 563 ||||||||||||||||||||| Sbjct: 112989 atattttgggttcatagtaca 113009
>emb|AL953883.5| Human DNA sequence from clone RP11-246P17 on chromosome 9, complete sequence Length = 102894 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 atattttgggttcatagtaca 563 ||||||||||||||||||||| Sbjct: 39503 atattttgggttcatagtaca 39483
>emb|AL353791.7| Human DNA sequence from clone RP11-475B17 on chromosome 9 Contains the 3' end of novel protein similar to contactin associated protein-like 3 (CNTNAP3) and a pseudogene similar to part of vomeronasal 2 family, complete sequence Length = 208233 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 atattttgggttcatagtaca 563 ||||||||||||||||||||| Sbjct: 147402 atattttgggttcatagtaca 147422
>emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k9, COMPLETE SEQUENCE Length = 123977 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 atattttgggttcatagtaca 563 ||||||||||||||||||||| Sbjct: 104108 atattttgggttcatagtaca 104088
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 cggcggcagcggaggggaaggggag 198 |||||||||||||||| |||||||| Sbjct: 126917 cggcggcagcggagggaaaggggag 126893
>emb|AL591855.11| Human DNA sequence from clone RP11-4C12 on chromosome 9, complete sequence Length = 153214 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 atattttgggttcatagtaca 563 ||||||||||||||||||||| Sbjct: 49205 atattttgggttcatagtaca 49225
>ref|XM_001225690.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_08035) mRNA, complete cds Length = 3384 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ggcggcagcggaggggaagg 194 |||||||||||||||||||| Sbjct: 2616 ggcggcagcggaggggaagg 2635
>tpe|BN000872.1| TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 aatcaaatgagggagctcaaaatg 423 |||||||||||||| ||||||||| Sbjct: 1042562 aatcaaatgagggacctcaaaatg 1042585
>gb|DQ397571.2| Cenarchaeum symbiosum clone C08E06, complete sequence Length = 40576 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gccctcgaggcgcgctatcc 50 |||||||||||||||||||| Sbjct: 37487 gccctcgaggcgcgctatcc 37468
>gb|DQ397837.1| Cenarchaeum symbiosum clone C03G11, complete sequence Length = 41322 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gccctcgaggcgcgctatcc 50 |||||||||||||||||||| Sbjct: 26614 gccctcgaggcgcgctatcc 26595
>gb|DQ397552.1| Cenarchaeum symbiosum clone C07G05, complete sequence Length = 39781 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gccctcgaggcgcgctatcc 50 |||||||||||||||||||| Sbjct: 28985 gccctcgaggcgcgctatcc 28966
>gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence Length = 114045 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cccggcccggcttccgggaggagc 155 ||||||||||||||||||| |||| Sbjct: 2639 cccggcccggcttccgggacgagc 2662
>gb|AC130730.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0681D04, complete sequence Length = 163670 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agcggaggggaaggggagcg 200 |||||||||||||||||||| Sbjct: 51186 agcggaggggaaggggagcg 51205
>gb|AC161246.2| Mus musculus BAC clone RP24-421E18 from chromosome 9, complete sequence Length = 201524 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 agcagtaaaatgcttgccca 543 |||||||||||||||||||| Sbjct: 173093 agcagtaaaatgcttgccca 173112
>gb|AC122850.4| Mus musculus BAC clone RP23-167J19 from 10, complete sequence Length = 234973 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 aatatttgtaatatctaagc 526 |||||||||||||||||||| Sbjct: 229758 aatatttgtaatatctaagc 229739
>gb|AC162918.3| Mus musculus BAC clone RP23-370K14 from chromosome 10, complete sequence Length = 165624 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 aatatttgtaatatctaagc 526 |||||||||||||||||||| Sbjct: 146668 aatatttgtaatatctaagc 146687
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agcggaggggaaggggagcg 200 |||||||||||||||||||| Sbjct: 5627222 agcggaggggaaggggagcg 5627241
>emb|AL356984.13| Human DNA sequence from clone RP11-333E3 on chromosome 1 Contains the gene for actin-related protein M2 (ARPM2), complete sequence Length = 38206 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 tctaagcagtaaaatgcttg 539 |||||||||||||||||||| Sbjct: 16319 tctaagcagtaaaatgcttg 16338
>emb|CR385056.20| Wallaby DNA sequence from clone GRWB-43E9, complete sequence Length = 153276 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ggcagcggaggggaagggga 197 |||||||||||||||||||| Sbjct: 92633 ggcagcggaggggaagggga 92614
>gb|AC027559.17| Homo sapiens chromosome 15, clone RP11-89K11, complete sequence Length = 130473 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 tccgggaggccctgaaggag 272 |||||||||||||||||||| Sbjct: 115736 tccgggaggccctgaaggag 115755
>gb|AC147328.4| Pan troglodytes BAC clone RP43-30N11 from chromosome 7, complete sequence Length = 207176 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tccgggaggccctgaaggag 272 |||||||||||||||||||| Sbjct: 57020 tccgggaggccctgaaggag 57001
>gb|AC079181.3|AC079181 Mus musculus strain C57BL/6J chromosome 12 clone RP23-197F8, complete sequence Length = 209058 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 aatcaaatgagggagctcaaaatg 423 |||||||||||||| ||||||||| Sbjct: 39664 aatcaaatgagggacctcaaaatg 39687
>gb|AC073082.6| Homo sapiens BAC clone RP11-310N16 from 2, complete sequence Length = 177047 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ctccgggaggccctgaagga 271 |||||||||||||||||||| Sbjct: 118456 ctccgggaggccctgaagga 118437
>dbj|AP008228.1| Thermus thermophilus HB8 plasmid pTT8 DNA, complete sequence Length = 9322 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cctccgggaggccctgaagg 270 |||||||||||||||||||| Sbjct: 9139 cctccgggaggccctgaagg 9158
>gb|AC090164.22| Homo sapiens chromosome 15, clone RP11-14C10, complete sequence Length = 204674 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tccgggaggccctgaaggag 272 |||||||||||||||||||| Sbjct: 162814 tccgggaggccctgaaggag 162795
>dbj|AB119193.1| Thermus thermophilus plasmid pTT8, complete sequence Length = 9328 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cctccgggaggccctgaagg 270 |||||||||||||||||||| Sbjct: 3286 cctccgggaggccctgaagg 3305
>gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, partial genome Length = 189370 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ccgcgccgcctttccgcagg 126 |||||||||||||||||||| Sbjct: 164633 ccgcgccgcctttccgcagg 164614 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 94,103,520 Number of extensions: 4926548 Number of successful extensions: 95834 Number of sequences better than 10.0: 44 Number of HSP's gapped: 95826 Number of HSP's successfully gapped: 49 Length of query: 611 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 589 Effective length of database: 18,508,616,841 Effective search space: 10901575319349 Effective search space used: 10901575319349 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)