ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf90i17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CT828849.1| Oryza sativa (indica cultivar-group) cDNA clone:... 307 2e-80
2ref|NM_001059908.1| Oryza sativa (japonica cultivar-group) Os04g... 283 4e-73
3dbj|AK065957.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 4e-73
4gb|AY107722.1| Zea mays PCO146241 mRNA sequence 268 2e-68
5emb|CR855230.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 228 2e-56
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 228 2e-56
7emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4,... 228 2e-56
8emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4,... 228 2e-56
9emb|AJ234558.1|HVU234558 Hordeum vulgare genomic DNA fragment; c... 198 2e-47
10emb|AL158093.8| Human DNA sequence from clone RP5-959I16 on chro... 46 0.15
11emb|CU137662.1| Medicago truncatula chromosome 5 clone mth2-155l... 42 2.3
12gb|AY730302.1| Mazaea phialanthoides internal transcribed spacer... 42 2.3
13gb|AC122725.30| Medicago truncatula clone mth2-4c11, complete se... 42 2.3
14gb|AC151424.15| Medicago truncatula clone mth2-101c17, complete ... 42 2.3
15gb|AF394547.1| Oryza sativa alpha-expansin OsEXPA7 (EXPA7) gene,... 42 2.3
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
17emb|BX664730.2| Human DNA sequence from clone RP11-118H15 on chr... 42 2.3
18emb|AL954685.6| Human DNA sequence from clone RP11-237M21 on chr... 42 2.3
19emb|AL953883.5| Human DNA sequence from clone RP11-246P17 on chr... 42 2.3
20emb|AL353791.7| Human DNA sequence from clone RP11-475B17 on chr... 42 2.3
21emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k... 42 2.3
22gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genom... 42 2.3
23emb|AL591855.11| Human DNA sequence from clone RP11-4C12 on chro... 42 2.3
24ref|XM_001225690.1| Chaetomium globosum CBS 148.51 hypothetical ... 40 9.0
25tpe|BN000872.1| TPA_exp: Mus musculus immunoglobulin heavy chain... 40 9.0
26gb|DQ397571.2| Cenarchaeum symbiosum clone C08E06, complete sequ... 40 9.0
27gb|DQ397837.1| Cenarchaeum symbiosum clone C03G11, complete sequ... 40 9.0
28gb|DQ397552.1| Cenarchaeum symbiosum clone C07G05, complete sequ... 40 9.0
29gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial ... 40 9.0
30gb|AC130730.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
31gb|AC161246.2| Mus musculus BAC clone RP24-421E18 from chromosom... 40 9.0
32gb|AC122850.4| Mus musculus BAC clone RP23-167J19 from 10, compl... 40 9.0
33gb|AC162918.3| Mus musculus BAC clone RP23-370K14 from chromosom... 40 9.0
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
35emb|AL356984.13| Human DNA sequence from clone RP11-333E3 on chr... 40 9.0
36emb|CR385056.20| Wallaby DNA sequence from clone GRWB-43E9, comp... 40 9.0
37gb|AC027559.17| Homo sapiens chromosome 15, clone RP11-89K11, co... 40 9.0
38gb|AC147328.4| Pan troglodytes BAC clone RP43-30N11 from chromos... 40 9.0
39gb|AC079181.3|AC079181 Mus musculus strain C57BL/6J chromosome 1... 40 9.0
40gb|AC073082.6| Homo sapiens BAC clone RP11-310N16 from 2, comple... 40 9.0
41dbj|AP008228.1| Thermus thermophilus HB8 plasmid pTT8 DNA, compl... 40 9.0
42gb|AC090164.22| Homo sapiens chromosome 15, clone RP11-14C10, co... 40 9.0
43dbj|AB119193.1| Thermus thermophilus plasmid pTT8, complete sequ... 40 9.0
44gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, par... 40 9.0

>emb|CT828849.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI029K14, full
           insert sequence
          Length = 635
 Score =  307 bits (155), Expect = 2e-80
 Identities = 233/259 (89%)
 Strand = Plus / Plus

                                                                       
Query: 212 cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagga 271
           ||||||||| ||||||||||||  |||||||||||||||||||||||||||| |||||||
Sbjct: 169 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagga 228

                                                                       
Query: 272 gccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatgagga 331
           ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 229 gccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatgagga 288

                                                                       
Query: 332 tcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggagaacag 391
           |||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| | | |
Sbjct: 289 tcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggatagccg 348

                                                                       
Query: 392 tgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattgagtg 451
             |||| ||||||| ||||||| ||||||||||||  ||||| |||||||||||||||||
Sbjct: 349 aaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattgagtg 408

                              
Query: 452 aggtgcattagttgccttt 470
           |||||||||||||| ||||
Sbjct: 409 aggtgcattagttgacttt 427



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>ref|NM_001059908.1| Oryza sativa (japonica cultivar-group) Os04g0528100 (Os04g0528100)
           mRNA, complete cds
          Length = 798

 Score =  283 bits (143), Expect = 4e-73
 Identities = 218/243 (89%)
 Strand = Plus / Plus

                                                                       
Query: 212 cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagga 271
           ||||||||| ||||||||||||  |||||||||||||||||||||||||||| |||||||
Sbjct: 172 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagga 231

                                                                       
Query: 272 gccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatgagga 331
           ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 232 gccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatgagga 291

                                                                       
Query: 332 tcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggagaacag 391
           |||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| | | |
Sbjct: 292 tcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggatagccg 351

                                                                       
Query: 392 tgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattgagtg 451
             |||| ||||||| ||||||| ||||||||||||  ||||| |||||||||||||||||
Sbjct: 352 aaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattgagtg 411

              
Query: 452 agg 454
           |||
Sbjct: 412 agg 414



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>dbj|AK065957.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044D08, full
           insert sequence
          Length = 800

 Score =  283 bits (143), Expect = 4e-73
 Identities = 218/243 (89%)
 Strand = Plus / Plus

                                                                       
Query: 212 cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagga 271
           ||||||||| ||||||||||||  |||||||||||||||||||||||||||| |||||||
Sbjct: 173 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagga 232

                                                                       
Query: 272 gccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatgagga 331
           ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 233 gccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatgagga 292

                                                                       
Query: 332 tcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggagaacag 391
           |||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| | | |
Sbjct: 293 tcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggatagccg 352

                                                                       
Query: 392 tgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattgagtg 451
             |||| ||||||| ||||||| ||||||||||||  ||||| |||||||||||||||||
Sbjct: 353 aaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattgagtg 412

              
Query: 452 agg 454
           |||
Sbjct: 413 agg 415



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>gb|AY107722.1| Zea mays PCO146241 mRNA sequence
          Length = 583

 Score =  268 bits (135), Expect = 2e-68
 Identities = 222/251 (88%)
 Strand = Plus / Plus

                                                                       
Query: 210 gtcgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaag 269
           ||||||||||| | |||||| ||| ||||||| || ||||||||||| || ||| | |||
Sbjct: 187 gtcgtgcgagctttcttcaaccctctcggggatgagcgcatcctccgagaagccatcaag 246

                                                                       
Query: 270 gagccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatgag 329
           |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 247 gagccagtagcattcatgggtggtgtgtttgctggcctcttgaggcttgacctgaatgag 306

                                                                       
Query: 330 gatcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggagaac 389
           |||||||||||||| ||| ||| ||| || || ||||||||||||||||||||||| |||
Sbjct: 307 gatcctctcaaggaatggataagtcggacagtggaggcttctggaatagctgaggaaaac 366

                                                                       
Query: 390 agtgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattgag 449
           ||  | || ||||||| ||||| || ||||||||||| ||| ||||||||||||||||||
Sbjct: 367 agctctgaagaatcaagtgaggcagatcaaaatgatgcacctcagcaaattgagattgag 426

                      
Query: 450 tgaggtgcatt 460
           |||||||||||
Sbjct: 427 tgaggtgcatt 437



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 491 cttgtaacttatcctgaatat 511
           |||||||||||||||||||||
Sbjct: 467 cttgtaacttatcctgaatat 487



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>emb|CR855230.1| Oryza sativa genomic DNA, chromosome 4, BAC clone:
             OSIGBa0115K01-H0319F09, complete sequence
          Length = 189580

 Score =  228 bits (115), Expect = 2e-56
 Identities = 181/203 (89%)
 Strand = Plus / Plus

                                                                         
Query: 268   aggagccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatg 327
             ||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 98447 aggagccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatg 98506

                                                                         
Query: 328   aggatcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggaga 387
             |||||||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| |
Sbjct: 98507 aggatcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggata 98566

                                                                         
Query: 388   acagtgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattg 447
              | |  |||| ||||||| ||||||| ||||||||||||  ||||| |||||||||||||
Sbjct: 98567 gccgaaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattg 98626

                                    
Query: 448   agtgaggtgcattagttgccttt 470
             |||||||||||||||||| ||||
Sbjct: 98627 agtgaggtgcattagttgacttt 98649



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                        
Query: 212   cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagg 270
             ||||||||| ||||||||||||  |||||||||||||||||||||||||||| ||||||
Sbjct: 98019 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagg 98077



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  228 bits (115), Expect = 2e-56
 Identities = 181/203 (89%)
 Strand = Plus / Plus

                                                                            
Query: 268      aggagccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatg 327
                ||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 26361701 aggagccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatg 26361760

                                                                            
Query: 328      aggatcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggaga 387
                |||||||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| |
Sbjct: 26361761 aggatcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggata 26361820

                                                                            
Query: 388      acagtgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattg 447
                 | |  |||| ||||||| ||||||| ||||||||||||  ||||| |||||||||||||
Sbjct: 26361821 gccgaaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattg 26361880

                                       
Query: 448      agtgaggtgcattagttgccttt 470
                |||||||||||||||||| ||||
Sbjct: 26361881 agtgaggtgcattagttgacttt 26361903



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                           
Query: 212      cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagg 270
                ||||||||| ||||||||||||  |||||||||||||||||||||||||||| ||||||
Sbjct: 26361273 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagg 26361331



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>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10,
              complete sequence
          Length = 141545

 Score =  228 bits (115), Expect = 2e-56
 Identities = 181/203 (89%)
 Strand = Plus / Plus

                                                                          
Query: 268    aggagccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatg 327
              ||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 138278 aggagccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatg 138337

                                                                          
Query: 328    aggatcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggaga 387
              |||||||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| |
Sbjct: 138338 aggatcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggata 138397

                                                                          
Query: 388    acagtgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattg 447
               | |  |||| ||||||| ||||||| ||||||||||||  ||||| |||||||||||||
Sbjct: 138398 gccgaaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattg 138457

                                     
Query: 448    agtgaggtgcattagttgccttt 470
              |||||||||||||||||| ||||
Sbjct: 138458 agtgaggtgcattagttgacttt 138480



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                         
Query: 212    cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagg 270
              ||||||||| ||||||||||||  |||||||||||||||||||||||||||| ||||||
Sbjct: 137850 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagg 137908



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>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08,
            complete sequence
          Length = 171551

 Score =  228 bits (115), Expect = 2e-56
 Identities = 181/203 (89%)
 Strand = Plus / Plus

                                                                        
Query: 268  aggagccagttgcattcatgggtggtgtgtttgctggtctcttaaggcttgacctgaatg 327
            ||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 2334 aggagccagttgcattcatgggtggtgtgtttgctggcctattgaggcttgacctgaatg 2393

                                                                        
Query: 328  aggatcctctcaaggagtgggtaactcgaacggtagaggcttctggaatagctgaggaga 387
            |||||||||||||||| ||| | ||| | |||||||||||||||||| | |||||||| |
Sbjct: 2394 aggatcctctcaaggaatggatcactaggacggtagaggcttctggagttgctgaggata 2453

                                                                        
Query: 388  acagtgccgaggaatcaaatgagggagctcaaaatgatggaccccagcaaattgagattg 447
             | |  |||| ||||||| ||||||| ||||||||||||  ||||| |||||||||||||
Sbjct: 2454 gccgaaccgatgaatcaagtgagggatctcaaaatgatgcgccccaacaaattgagattg 2513

                                   
Query: 448  agtgaggtgcattagttgccttt 470
            |||||||||||||||||| ||||
Sbjct: 2514 agtgaggtgcattagttgacttt 2536



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                       
Query: 212  cgtgcgagcatgcttcaatcctttcggggacgaacgcatcctccgggaggccctgaagg 270
            ||||||||| ||||||||||||  |||||||||||||||||||||||||||| ||||||
Sbjct: 1906 cgtgcgagcttgcttcaatcctcccggggacgaacgcatcctccgggaggccttgaagg 1964



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>emb|AJ234558.1|HVU234558 Hordeum vulgare genomic DNA fragment; clone MWG0801.uni
          Length = 335

 Score =  198 bits (100), Expect = 2e-47
 Identities = 113/116 (97%), Gaps = 1/116 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   aaggtagctcacatttcgctgctcaccgagccctcgaggcgcgctatccatggccaccta 61
           |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 aaggcagctcgcatttcgctgctcaccgagccctcgaggcgcgctatccatggccaccta 187

                                                                   
Query: 62  ctacccgtccggcgcttccgcgc-tcctgctccccgtcccgcgaacccgcgccgcc 116
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 188 ctacccgtccggcgcttccgcgcttcctgctccccgtcccgcgaacccgcgccgcc 243



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>emb|AL158093.8| Human DNA sequence from clone RP5-959I16 on chromosome 20 Contains
             STSs, GSSs and a CpG island, complete sequence
          Length = 112674

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 503   cctgaatatttgtaatatctaag 525
             |||||||||||||||||||||||
Sbjct: 96495 cctgaatatttgtaatatctaag 96517



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>emb|CU137662.1| Medicago truncatula chromosome 5 clone mth2-155l8, COMPLETE SEQUENCE
          Length = 111929

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 543    atattttgggttcatagtaca 563
              |||||||||||||||||||||
Sbjct: 107798 atattttgggttcatagtaca 107818



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>gb|AY730302.1| Mazaea phialanthoides internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 683

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                        
Query: 124 aggggtttcccggcccggct-tccgggag 151
           |||||||||||||||||||| ||||||||
Sbjct: 100 aggggtttcccggcccggctctccgggag 72



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>gb|AC122725.30| Medicago truncatula clone mth2-4c11, complete sequence
          Length = 134892

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 543    atattttgggttcatagtaca 563
              |||||||||||||||||||||
Sbjct: 107623 atattttgggttcatagtaca 107603



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>gb|AC151424.15| Medicago truncatula clone mth2-101c17, complete sequence
          Length = 137117

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 494   gtaacttatcctgaatatttgtaat 518
             |||||||||| ||||||||||||||
Sbjct: 81933 gtaacttatcatgaatatttgtaat 81957



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>gb|AF394547.1| Oryza sativa alpha-expansin OsEXPA7 (EXPA7) gene, complete cds
          Length = 4985

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 174  cggcggcagcggaggggaaggggag 198
            |||||||||||||||| ||||||||
Sbjct: 1114 cggcggcagcggagggaaaggggag 1090



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 174      cggcggcagcggaggggaaggggag 198
                |||||||||||||||| ||||||||
Sbjct: 34298553 cggcggcagcggagggaaaggggag 34298577



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>emb|BX664730.2| Human DNA sequence from clone RP11-118H15 on chromosome 9 Contains a
              novel gene, complete sequence
          Length = 171251

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 543    atattttgggttcatagtaca 563
              |||||||||||||||||||||
Sbjct: 116473 atattttgggttcatagtaca 116453



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>emb|AL954685.6| Human DNA sequence from clone RP11-237M21 on chromosome 9, complete
              sequence
          Length = 130124

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 543    atattttgggttcatagtaca 563
              |||||||||||||||||||||
Sbjct: 112989 atattttgggttcatagtaca 113009



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>emb|AL953883.5| Human DNA sequence from clone RP11-246P17 on chromosome 9, complete
             sequence
          Length = 102894

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 543   atattttgggttcatagtaca 563
             |||||||||||||||||||||
Sbjct: 39503 atattttgggttcatagtaca 39483



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>emb|AL353791.7| Human DNA sequence from clone RP11-475B17 on chromosome 9 Contains the 3'
              end of novel protein similar to contactin associated
              protein-like 3 (CNTNAP3) and a pseudogene similar to part
              of vomeronasal 2 family, complete sequence
          Length = 208233

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 543    atattttgggttcatagtaca 563
              |||||||||||||||||||||
Sbjct: 147402 atattttgggttcatagtaca 147422



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>emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k9, COMPLETE SEQUENCE
          Length = 123977

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 543    atattttgggttcatagtaca 563
              |||||||||||||||||||||
Sbjct: 104108 atattttgggttcatagtaca 104088



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>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete
              sequence
          Length = 143205

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 174    cggcggcagcggaggggaaggggag 198
              |||||||||||||||| ||||||||
Sbjct: 126917 cggcggcagcggagggaaaggggag 126893



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>emb|AL591855.11| Human DNA sequence from clone RP11-4C12 on chromosome 9, complete
             sequence
          Length = 153214

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 543   atattttgggttcatagtaca 563
             |||||||||||||||||||||
Sbjct: 49205 atattttgggttcatagtaca 49225



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>ref|XM_001225690.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_08035)
            mRNA, complete cds
          Length = 3384

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 175  ggcggcagcggaggggaagg 194
            ||||||||||||||||||||
Sbjct: 2616 ggcggcagcggaggggaagg 2635



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>tpe|BN000872.1| TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus,
               strain C57BL/6
          Length = 2500000

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 400     aatcaaatgagggagctcaaaatg 423
               |||||||||||||| |||||||||
Sbjct: 1042562 aatcaaatgagggacctcaaaatg 1042585



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>gb|DQ397571.2| Cenarchaeum symbiosum clone C08E06, complete sequence
          Length = 40576

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    gccctcgaggcgcgctatcc 50
             ||||||||||||||||||||
Sbjct: 37487 gccctcgaggcgcgctatcc 37468



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>gb|DQ397837.1| Cenarchaeum symbiosum clone C03G11, complete sequence
          Length = 41322

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    gccctcgaggcgcgctatcc 50
             ||||||||||||||||||||
Sbjct: 26614 gccctcgaggcgcgctatcc 26595



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>gb|DQ397552.1| Cenarchaeum symbiosum clone C07G05, complete sequence
          Length = 39781

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    gccctcgaggcgcgctatcc 50
             ||||||||||||||||||||
Sbjct: 28985 gccctcgaggcgcgctatcc 28966



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>gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence
          Length = 114045

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 132  cccggcccggcttccgggaggagc 155
            ||||||||||||||||||| ||||
Sbjct: 2639 cccggcccggcttccgggacgagc 2662



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>gb|AC130730.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0681D04,
             complete sequence
          Length = 163670

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   agcggaggggaaggggagcg 200
             ||||||||||||||||||||
Sbjct: 51186 agcggaggggaaggggagcg 51205



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>gb|AC161246.2| Mus musculus BAC clone RP24-421E18 from chromosome 9, complete sequence
          Length = 201524

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 524    agcagtaaaatgcttgccca 543
              ||||||||||||||||||||
Sbjct: 173093 agcagtaaaatgcttgccca 173112



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>gb|AC122850.4| Mus musculus BAC clone RP23-167J19 from 10, complete sequence
          Length = 234973

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 507    aatatttgtaatatctaagc 526
              ||||||||||||||||||||
Sbjct: 229758 aatatttgtaatatctaagc 229739



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>gb|AC162918.3| Mus musculus BAC clone RP23-370K14 from chromosome 10, complete sequence
          Length = 165624

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 507    aatatttgtaatatctaagc 526
              ||||||||||||||||||||
Sbjct: 146668 aatatttgtaatatctaagc 146687



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 181     agcggaggggaaggggagcg 200
               ||||||||||||||||||||
Sbjct: 5627222 agcggaggggaaggggagcg 5627241



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>emb|AL356984.13| Human DNA sequence from clone RP11-333E3 on chromosome 1 Contains the
             gene for actin-related protein M2 (ARPM2), complete
             sequence
          Length = 38206

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   tctaagcagtaaaatgcttg 539
             ||||||||||||||||||||
Sbjct: 16319 tctaagcagtaaaatgcttg 16338



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>emb|CR385056.20| Wallaby DNA sequence from clone GRWB-43E9, complete sequence
          Length = 153276

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   ggcagcggaggggaagggga 197
             ||||||||||||||||||||
Sbjct: 92633 ggcagcggaggggaagggga 92614



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>gb|AC027559.17| Homo sapiens chromosome 15, clone RP11-89K11, complete sequence
          Length = 130473

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    tccgggaggccctgaaggag 272
              ||||||||||||||||||||
Sbjct: 115736 tccgggaggccctgaaggag 115755



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>gb|AC147328.4| Pan troglodytes BAC clone RP43-30N11 from chromosome 7, complete
             sequence
          Length = 207176

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   tccgggaggccctgaaggag 272
             ||||||||||||||||||||
Sbjct: 57020 tccgggaggccctgaaggag 57001



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>gb|AC079181.3|AC079181 Mus musculus strain C57BL/6J chromosome 12 clone RP23-197F8, complete
             sequence
          Length = 209058

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 400   aatcaaatgagggagctcaaaatg 423
             |||||||||||||| |||||||||
Sbjct: 39664 aatcaaatgagggacctcaaaatg 39687



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>gb|AC073082.6| Homo sapiens BAC clone RP11-310N16 from 2, complete sequence
          Length = 177047

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    ctccgggaggccctgaagga 271
              ||||||||||||||||||||
Sbjct: 118456 ctccgggaggccctgaagga 118437



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>dbj|AP008228.1| Thermus thermophilus HB8 plasmid pTT8 DNA, complete sequence
          Length = 9322

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 251  cctccgggaggccctgaagg 270
            ||||||||||||||||||||
Sbjct: 9139 cctccgggaggccctgaagg 9158



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>gb|AC090164.22| Homo sapiens chromosome 15, clone RP11-14C10, complete sequence
          Length = 204674

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    tccgggaggccctgaaggag 272
              ||||||||||||||||||||
Sbjct: 162814 tccgggaggccctgaaggag 162795



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>dbj|AB119193.1| Thermus thermophilus plasmid pTT8, complete sequence
          Length = 9328

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 251  cctccgggaggccctgaagg 270
            ||||||||||||||||||||
Sbjct: 3286 cctccgggaggccctgaagg 3305



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>gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, partial genome
          Length = 189370

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    ccgcgccgcctttccgcagg 126
              ||||||||||||||||||||
Sbjct: 164633 ccgcgccgcctttccgcagg 164614


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 94,103,520
Number of extensions: 4926548
Number of successful extensions: 95834
Number of sequences better than 10.0: 44
Number of HSP's gapped: 95826
Number of HSP's successfully gapped: 49
Length of query: 611
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 589
Effective length of database: 18,508,616,841
Effective search space: 10901575319349
Effective search space used: 10901575319349
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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