ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf93j03 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os12g28690:12012.t02579:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 87.7 bits (185), Expect(3) = 2e-31 Identities = 36/107 (33%), Positives = 64/107 (59%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y +F +LARYA+ D+ D++ K Sbjct: 358 TWEEFTAAFRENFVPTAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKR 678 Score = 66.1 bits (138), Expect(3) = 2e-31 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + D+P +AEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATADEPMEAEDWLRIIEKKLTLVRVREADKVIFAVNQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 33.1 bits (66), Expect(3) = 2e-31 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +1 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 862 NVDCFNCGKYGHYANNC 912 Score = 40.5 bits (82), Expect(2) = 5e-07 Identities = 23/53 (43%), Positives = 27/53 (50%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P +W A +T S+ RTL + R QSSAS G S NV Sbjct: 329 SL*VSHQSPAGPSSWFTAKITLSASRTLTRVSFFSMMRSQSSASMGSSAVANV 171 Score = 34.5 bits (69), Expect(2) = 5e-07 Identities = 21/71 (29%), Positives = 37/71 (52%) Frame = -1 / -1 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q ++Q ELV L IR + V QL +L +L+HR L Q+ +L+ + R Sbjct: 573 QFIIQPFYELVDLFFFIRQVSNCVASQLSELV*ILLHRCIPLPQSSKLVLLHAHHCSRYE 394 Query: 759 VGSEVTTKLVP 727 + ++ ++L+P Sbjct: 393 ILAKRCSELLP 361
>LOC_Os04g43950:12004.t03935:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 86.8 bits (183), Expect(3) = 2e-31 Identities = 36/107 (33%), Positives = 64/107 (59%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y +F +LARYA+ D+ D++ K Sbjct: 358 TWEEFTVAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKR 678 Score = 66.1 bits (138), Expect(3) = 2e-31 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + D+P +AEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATADEPMEAEDWLRIIEKKLTLVRVREADKVIFAVNQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 33.6 bits (67), Expect(3) = 2e-31 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +1 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 862 NVDCFNCGEYGHYANNC 912 Score = 40.0 bits (81), Expect(2) = 1e-04 Identities = 23/53 (43%), Positives = 27/53 (50%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P +W A +T S+ RTL + R QSSAS G S NV Sbjct: 329 SL*VSHQSPAGPSSWFTAKITLSASRTLTRVSFFSMMRNQSSASMGSSAVANV 171 Score = 26.7 bits (52), Expect(2) = 1e-04 Identities = 19/71 (26%), Positives = 35/71 (49%) Frame = -1 / -1 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q ++Q ELV L I + V QL +L +L+H L Q+ +L+ + R Sbjct: 573 QFIIQPFYELVDLFFFICQVSNCVASQLSELV*ILLHCCIPLPQSSKLVLLHAHHCSRYE 394 Query: 759 VGSEVTTKLVP 727 + ++ ++L+P Sbjct: 393 ILAKRYSELLP 361
>LOC_Os12g26790:12012.t02392:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 85.8 bits (181), Expect(3) = 5e-31 Identities = 35/107 (32%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA +D+ D++ K Sbjct: 358 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATRDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 66.1 bits (138), Expect(3) = 5e-31 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 33.6 bits (67), Expect(3) = 5e-31 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ GH+ANKC Sbjct: 814 QNRAPAPNQAATGSVRPGSCFNCGEYGHFANKC 912 Score = 36.3 bits (73), Expect = 0.66 Identities = 22/53 (41%), Positives = 25/53 (47%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT + QSSAS G S NV Sbjct: 329 SLYVSHQSPAGPSNWFAAKITLSASRTRTRVSFFSMILNQSSASIGSSAVANV 171
>LOC_Os01g19100:12001.t01700:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 4413 Score = 85.8 bits (181), Expect(3) = 5e-31 Identities = 35/107 (32%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA +D+ D++ K Sbjct: 358 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATRDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 66.1 bits (138), Expect(3) = 5e-31 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 33.6 bits (67), Expect(3) = 5e-31 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ GH+ANKC Sbjct: 814 QNRAPAPNQAATGSVRPGSCFNCGEYGHFANKC 912 Score = 36.3 bits (73), Expect = 0.66 Identities = 22/53 (41%), Positives = 25/53 (47%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT + QSSAS G S NV Sbjct: 329 SLYVSHQSPAGPSNWFAAKITLSASRTRTRVSFFSMILNQSSASIGSSAVANV 171
>LOC_Os07g15080:12007.t01371:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5990 Score = 87.7 bits (185), Expect(3) = 6e-31 Identities = 36/107 (33%), Positives = 64/107 (59%) Frame = +1 / +3 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y +F +LARYA+ D+ D++ K Sbjct: 1935 TWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLADEEEK 2114 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 2115 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKR 2255 Score = 64.8 bits (135), Expect(3) = 6e-31 Identities = 26/67 (38%), Positives = 37/67 (55%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + D+P +AEDW+R + K VR D V FA QL+G A WW Sbjct: 1713 SSFGEFMRTKPPTFATADEPMEAEDWLRIIEKKLTLVRVREADKVIFAVNQLEGPAGDWW 1892 Query: 688 QQLKDSR 708 K +R Sbjct: 1893 DTYKGAR 1913 Score = 33.6 bits (67), Expect(3) = 6e-31 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +3 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 2439 NVDCFNCGEYGHYANNC 2489 Score = 39.6 bits (80), Expect(2) = 1e-04 Identities = 21/48 (43%), Positives = 25/48 (52%) Frame = -2 / -2 Query: 686 HQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 HQ A P +W A +T S+ RTL + R QSSAS G S NV Sbjct: 1891 HQSPAGPSSWFTAKITLSASRTLTRVSFFSMMRSQSSASMGSSAVANV 1748 Score = 27.2 bits (53), Expect(2) = 1e-04 Identities = 19/71 (26%), Positives = 35/71 (49%) Frame = -1 / -1 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q ++Q ELV L I + V QL +L +L+H L Q+ +L+ + R Sbjct: 2150 QFIIQPFYELVDLFFFICQVSNCVASQLSELV*ILLHCCIPLPQSSKLVLLHAHHCSRYE 1971 Query: 759 VGSEVTTKLVP 727 + ++ ++L+P Sbjct: 1970 ILAKRCSELLP 1938
>LOC_Os12g18320:12012.t01682:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4412 Score = 84.9 bits (179), Expect(3) = 6e-31 Identities = 35/107 (32%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA+ D+ +++ K Sbjct: 358 TWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYAIGDLANEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKR 678 Score = 70.3 bits (147), Expect(3) = 6e-31 Identities = 28/67 (41%), Positives = 40/67 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+S + TFT+ D+P +AEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMSTKPPTFTTTDEPMEAEDWLRIIEKKLTLIRVREADKVIFAVNQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 29.9 bits (59), Expect(3) = 6e-31 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +1 / +1 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C C + GHYAN C Sbjct: 862 NVDCFNCEEYGHYANNC 912 Score = 39.6 bits (80), Expect(2) = 1e-06 Identities = 23/53 (43%), Positives = 28/53 (52%) Frame = -2 / -1 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P +W A +T S+ RT + + R QSSAS G S VNV Sbjct: 329 SL*VSHQSPAGPSSWFTAKITLSASRTRIRVSFFSMIRSQSSASIGSSVVVNV 171 Score = 34.1 bits (68), Expect(2) = 1e-06 Identities = 23/88 (26%), Positives = 43/88 (48%) Frame = -1 / -3 Query: 990 VIEFVKLLRIVQSEC*LQILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALL 811 V + ++ L ++ + Q ++Q ELV L L I + + GQL + + +HR L Sbjct: 624 VDQALEALMVLPNHRSTQFIIQPFYELVDLFLFICKVSNCIAGQLSEPVQIFLHRCVPLS 445 Query: 810 QAPELLTHLLNKTGRNVVGSEVTTKLVP 727 Q EL+ + R+ V ++ ++L P Sbjct: 444 QPSELVLLHTHYRSRHEVLAKCCSELFP 361 Score = 39.1 bits (79), Expect = 0.098 Identities = 23/68 (33%), Positives = 36/68 (52%) Frame = -1 / -3 Query: 690 LPPNRSLPLQLECCKLDIILWTHIATLEMLVHITDPIFRVKRLVARSERPKLV*QELTQT 511 +PP S LQL C+ + + H + L++ T PIF + RLV RSER L +L++ Sbjct: 318 IPPITSGSLQLVYCEDHFVGFAHPDKGQFLLYDT*PIFCLHRLVCRSERGWLGAHKLSKA 139 Query: 510 GEVIATLL 487 + L+ Sbjct: 138 *SFVVALI 115
>LOC_Os10g28930:12010.t02242:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 85.8 bits (181), Expect(3) = 6e-31 Identities = 35/107 (32%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA +D+ D++ K Sbjct: 358 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATRDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 65.7 bits (137), Expect(3) = 6e-31 Identities = 26/66 (39%), Positives = 37/66 (56%) Frame = +1 / +1 Query: 511 SLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQ 690 S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 139 SFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWWD 318 Query: 691 QLKDSR 708 K++R Sbjct: 319 TYKEAR 336 Score = 33.6 bits (67), Expect(3) = 6e-31 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ GH+ANKC Sbjct: 814 QNRAPAPNQAATGSVRPGSCFNCGEYGHFANKC 912 Score = 36.3 bits (73), Expect = 0.66 Identities = 22/53 (41%), Positives = 25/53 (47%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT + QSSAS G S NV Sbjct: 329 SLYVSHQSPAGPSNWFAAKITLSASRTRTRVSFFSMILNQSSASIGSSAVANV 171
>LOC_Os07g30430:12007.t02731:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3942 Score = 83.5 bits (176), Expect(3) = 9e-31 Identities = 34/107 (31%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA +D+ +++ K Sbjct: 358 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNHFTQLARYATRDLANEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 67.0 bits (140), Expect(3) = 9e-31 Identities = 27/66 (40%), Positives = 37/66 (56%) Frame = +1 / +1 Query: 511 SLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQ 690 S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 139 SFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLIRVREADKVIFAANQLEGPAGDWWD 318 Query: 691 QLKDSR 708 K+SR Sbjct: 319 TYKESR 336 Score = 33.6 bits (67), Expect(3) = 9e-31 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ GH+ANKC Sbjct: 814 QNRAPAPNQAATGSVRPGSCFNCGEYGHFANKC 912 Score = 38.6 bits (78), Expect = 0.13 Identities = 22/54 (40%), Positives = 27/54 (50%) Frame = -2 / -2 Query: 704 ESLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 +SL HQ A P NW A +T S+ RT + + QSSAS G S NV Sbjct: 332 DSLYVSHQSPAGPSNWFAAKITLSASRTRIRVSFFSMILNQSSASIGSSAVANV 171
>LOC_Os07g17090:12007.t01569:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2968 Score = 87.7 bits (185), Expect(3) = 1e-30 Identities = 36/107 (33%), Positives = 64/107 (59%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y +F +LARYA+ D+ D++ K Sbjct: 358 TWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKR 678 Score = 62.0 bits (129), Expect(3) = 1e-30 Identities = 24/66 (36%), Positives = 36/66 (54%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + D+P + EDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATADEPMETEDWLRIIEKKLTLVRVREADKVIFAVNQLEGPAGDWW 315 Query: 688 QQLKDS 705 K++ Sbjct: 316 DTYKEA 333 Score = 33.6 bits (67), Expect(3) = 1e-30 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +1 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 862 NVDCFNCGEYGHYANNC 912 Score = 38.6 bits (78), Expect(2) = 4e-06 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -2 / -3 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P +W A +T S+ RTL + R QSS S G S NV Sbjct: 329 SL*VSHQSPAGPSSWFTAKITLSASRTLTRVSFFSMMRSQSSVSMGSSAVANV 171 Score = 33.1 bits (66), Expect(2) = 4e-06 Identities = 23/88 (26%), Positives = 43/88 (48%) Frame = -1 / -2 Query: 990 VIEFVKLLRIVQSEC*LQILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALL 811 V + ++ L ++ + Q ++Q ELV L L I + + GQL +L + +HR L Sbjct: 624 VDQALEALMVLPNHRSTQFIIQPFYELVDLFLFICEVSNCIAGQLSELVQIFLHRCIPLS 445 Query: 810 QAPELLTHLLNKTGRNVVGSEVTTKLVP 727 Q +L+ + R V ++ ++L P Sbjct: 444 QPSKLVLLHAHHCSRYEVLAKRCSELFP 361
>LOC_Os09g08750:12009.t00669:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4899 Score = 85.8 bits (181), Expect(3) = 1e-30 Identities = 35/107 (32%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA +D+ D++ K Sbjct: 358 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATRDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 66.1 bits (138), Expect(3) = 1e-30 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 32.7 bits (65), Expect(3) = 1e-30 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +1 / +1 Query: 1255 TCHKCGQKGHYANKC 1299 +C CG+ GH+ANKC Sbjct: 868 SCFNCGEYGHFANKC 912 Score = 36.3 bits (73), Expect = 0.66 Identities = 22/53 (41%), Positives = 25/53 (47%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT + QSSAS G S NV Sbjct: 329 SLYVSHQSPAGPSNWFAAKITLSASRTRTRVSFFSMILNQSSASIGSSAVANV 171
>LOC_Os06g31350:12006.t02836:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6812 Score = 85.8 bits (181), Expect(3) = 1e-30 Identities = 36/107 (33%), Positives = 63/107 (58%) Frame = +1 / +2 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA+ D+ D++ K Sbjct: 1697 TWEEFTAAFRENFVPAAVMLMKKNEFRRLRQGNTTVQEYLNRFTQLARYAIGDLADEEEK 1876 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 1877 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKR 2017 Score = 66.1 bits (138), Expect(3) = 1e-30 Identities = 27/67 (40%), Positives = 39/67 (58%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + D+P +AEDW+R + K VR D V FA QL+G AS WW Sbjct: 1475 SSFGEFMRTKPPTFATADEPMEAEDWLRIIEKKLTLVWVREADKVIFAVNQLEGPASDWW 1654 Query: 688 QQLKDSR 708 K++R Sbjct: 1655 DTYKEAR 1675 Score = 33.6 bits (67), Expect(3) = 1e-30 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +2 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 2201 NVDCFNCGEYGHYANNC 2251 Score = 33.1 bits (66), Expect(2) = 4e-04 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = -1 / -2 Query: 690 LPPNRSLPLQLECCKLDIILWTHIATLEMLVHITDPIFRVKRLVARSER 544 +PP S QL C+ + + + + L++ T PIF + RLV RSER Sbjct: 1657 IPPITSGSFQLVYCEDHFVGFAYPDKGQFLLYDT*PIFCLHRLVCRSER 1511 Score = 31.8 bits (63), Expect(2) = 4e-04 Identities = 21/84 (25%), Positives = 41/84 (48%) Frame = -1 / -2 Query: 978 VKLLRIVQSEC*LQILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPE 799 ++ L I+ + Q+++Q ELV L I + + GQL + + +HR L Q + Sbjct: 1951 LETLMILPNHRSTQLIIQPFYELVDLFFFICEVSNCIAGQLSESVQIFLHRCVPLSQPSK 1772 Query: 798 LLTHLLNKTGRNVVGSEVTTKLVP 727 L+ + R+ V ++ ++L P Sbjct: 1771 LILLHKHYRSRHEVLAKCCSELFP 1700
>LOC_Os07g26220:12007.t02318:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4404 Score = 84.5 bits (178), Expect(3) = 1e-30 Identities = 35/107 (32%), Positives = 62/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + +FRRL+QG+ +V +Y F +LARYA +D+ D++ K Sbjct: 358 NWEEFTTAFRDNFVPAAVMRMKNNEFRRLQQGNTTVQEYLNRFTQLARYATRDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 66.1 bits (138), Expect(3) = 1e-30 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 33.6 bits (67), Expect(3) = 1e-30 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ GH+ANKC Sbjct: 814 QNRAPAPNQAATGSVRPGSCFNCGEYGHFANKC 912 Score = 36.3 bits (73), Expect = 0.66 Identities = 22/53 (41%), Positives = 25/53 (47%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT + QSSAS G S NV Sbjct: 329 SLYVSHQSPAGPSNWFAAKITLSASRTRTRVSFFSMILNQSSASIGSSAVANV 171
>LOC_Os03g59810:12003.t05225:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 82.2 bits (173), Expect(3) = 1e-30 Identities = 34/107 (31%), Positives = 61/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ ++ +Y F +LARYA D+ D + K Sbjct: 358 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTIQEYLNRFTQLARYATGDLADGEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 68.4 bits (143), Expect(3) = 1e-30 Identities = 27/67 (40%), Positives = 39/67 (58%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TFT+ ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFTTAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 33.6 bits (67), Expect(3) = 1e-30 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ GH+ANKC Sbjct: 814 QNRAPAPHQATTGSVRPGSCFNCGEYGHFANKC 912 Score = 36.3 bits (73), Expect = 0.66 Identities = 23/53 (43%), Positives = 26/53 (49%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P +W A +T S+ RT I QSSAS G S VNV Sbjct: 329 SL*VSHQSPAGPSSWFAAKITLSASRTRTRVSFFSIILNQSSASIGSSAVVNV 171
>LOC_Os04g05730:12004.t00454:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4084 Score = 86.3 bits (182), Expect(3) = 1e-30 Identities = 35/107 (32%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA +D+ D++ K Sbjct: 358 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATRDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELREPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 63.4 bits (132), Expect(3) = 1e-30 Identities = 25/67 (37%), Positives = 37/67 (55%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + T + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTLATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 34.1 bits (68), Expect(3) = 1e-30 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ GH+ANKC Sbjct: 814 QNRSPAPNQAATGSVRPGSCFNCGEYGHFANKC 912 Score = 36.3 bits (73), Expect = 0.66 Identities = 22/53 (41%), Positives = 25/53 (47%) Frame = -2 / -3 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT + QSSAS G S NV Sbjct: 329 SLYVSHQSPAGPSNWFAAKITLSASRTRTRVSFFSMILNQSSASIGSSAVANV 171
>LOC_Os02g34450:12002.t03084:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 85.8 bits (181), Expect(3) = 2e-30 Identities = 35/107 (32%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA +D+ D++ K Sbjct: 358 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATRDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 64.3 bits (134), Expect(3) = 2e-30 Identities = 25/67 (37%), Positives = 37/67 (55%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G WW Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVQVREADKVIFAANQLEGPTGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 33.6 bits (67), Expect(3) = 2e-30 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ GH+ANKC Sbjct: 814 QNRAPAPNQAATGSVRPGSCFNCGEYGHFANKC 912
>LOC_Os04g11310:12004.t00959:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 84.5 bits (178), Expect(3) = 2e-30 Identities = 34/107 (31%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FR+L+QG+ +V +Y F +LARYA +D+ D++ K Sbjct: 358 NWEEFTTAFRDNFVPAAVMRMKKNEFRKLRQGNTTVQEYLNRFTQLARYATRDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 66.1 bits (138), Expect(3) = 2e-30 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 32.7 bits (65), Expect(3) = 2e-30 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +1 / +1 Query: 1255 TCHKCGQKGHYANKC 1299 +C CG+ GH+ANKC Sbjct: 868 SCFNCGEYGHFANKC 912 Score = 36.3 bits (73), Expect = 0.66 Identities = 22/53 (41%), Positives = 25/53 (47%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT + QSSAS G S NV Sbjct: 329 SLYVSHQSPAGPSNWFAAKITLSASRTRTRVSFFSMILNQSSASIGSSAVANV 171
>LOC_Os12g43179:12012.t03989:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5954 Score = 85.4 bits (180), Expect(3) = 3e-30 Identities = 36/107 (33%), Positives = 63/107 (58%) Frame = +1 / +3 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA+ D+ D++ K Sbjct: 1899 TWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYAIGDLADEEEK 2078 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 2079 IDKFIEGLNDELRGPMIGQDHESF*SLINKVVRLENDQRTVEHNRKR 2219 Score = 65.2 bits (136), Expect(3) = 3e-30 Identities = 25/67 (37%), Positives = 38/67 (56%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + D+P AEDW+R++ K +R D V FA QL+G A WW Sbjct: 1677 SSFGEFMRTKPPTFATADEPMGAEDWLRNIKKKLTLVRMREADKVIFAVNQLEGPAGDWW 1856 Query: 688 QQLKDSR 708 K++R Sbjct: 1857 DTYKEAR 1877 Score = 33.1 bits (66), Expect(3) = 3e-30 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +3 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 2403 NVDCFNCGEYGHYANTC 2453 Score = 38.2 bits (77), Expect(2) = 3e-07 Identities = 25/88 (28%), Positives = 45/88 (51%) Frame = -1 / -1 Query: 990 VIEFVKLLRIVQSEC*LQILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALL 811 V + ++ L I+ + Q+++Q ELV L L I + V GQL + + +HR +L Sbjct: 2165 VDQALETLMILSNHRPTQLIIQPFYELVDLFLFICEVSDCVAGQLSEPVQIFLHRCVSLS 1986 Query: 810 QAPELLTHLLNKTGRNVVGSEVTTKLVP 727 Q EL+ + GR+ V ++ ++ P Sbjct: 1985 QPSELVLLHAHHRGRHEVLTKSCSEFFP 1902 Score = 37.3 bits (75), Expect(2) = 3e-07 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = -1 / -1 Query: 708 SGILKLLPPNRSLPLQLECCKLDIILWTHIATLEMLVHITDPIFRVKRLVARSE 547 S L +PP S LQL C+ + + H + L+++ PIF RLV RSE Sbjct: 1877 SSFLVSIPPITSWSLQLVYCEDHFVGFAHPDKGQFLLYVA*PIFCPHRLVCRSE 1716
>LOC_Os12g33260:12012.t03018:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2651 Score = 83.1 bits (175), Expect(3) = 4e-30 Identities = 36/107 (33%), Positives = 60/107 (56%) Frame = +1 / +3 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W EF FR +++P++ + + KFRRL+QG+ V +Y F +LA YA+ D+ D++ K Sbjct: 1875 TWGEFTTAFRENFVPAAVMRMKKNKFRRLRQGNTMVQEYLNRFTQLACYAIGDLADEEEK 2054 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 2055 IDKFIEGLNDELRGPMIGQDHESFQSLINKVIRLENDQRTVEHNRKR 2195 Score = 64.3 bits (134), Expect(3) = 4e-30 Identities = 25/67 (37%), Positives = 37/67 (55%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + D+P +AEDW+R + K VR D V FA QL+G WW Sbjct: 1653 SSFGEFMRTKPPTFATADEPMEAEDWLRIIEKKLTLVRVREADKVIFAVNQLEGPTGDWW 1832 Query: 688 QQLKDSR 708 K++R Sbjct: 1833 DTYKEAR 1853 Score = 33.6 bits (67), Expect(3) = 4e-30 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +3 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 2376 NVDCFNCGEYGHYANNC 2426 Score = 34.5 bits (69), Expect(2) = 2e-04 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = -1 / -1 Query: 690 LPPNRSLPLQLECCKLDIILWTHIATLEMLVHITDPIFRVKRLVARSE 547 +PP S LQL C+ + + H + L++ PIF + RL+ RSE Sbjct: 1835 IPPIASWSLQLVYCEDHFVSFAHPDKGQFLLYDA*PIFCLHRLICRSE 1692 Score = 31.8 bits (63), Expect(2) = 2e-04 Identities = 23/88 (26%), Positives = 42/88 (47%) Frame = -1 / -1 Query: 990 VIEFVKLLRIVQSEC*LQILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALL 811 V + ++ L ++ + Q ++Q ELV L L I I V GQL + + +H +L Sbjct: 2141 VDQALEALMVLPNHRSTQFIIQPFYELVDLFLFICEISDCVAGQLSEPVQIFLHHCVSLS 1962 Query: 810 QAPELLTHLLNKTGRNVVGSEVTTKLVP 727 Q EL+ + R+ V ++ ++ P Sbjct: 1961 QPSELILLHAHHRSRHEVLTKSCSEFSP 1878
>LOC_Os01g64070:12001.t05775:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6275 Score = 84.5 bits (178), Expect(3) = 4e-30 Identities = 35/107 (32%), Positives = 62/107 (57%) Frame = +1 / +2 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA D+ D++ K Sbjct: 1934 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATGDLADEEEK 2113 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 2114 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 2254 Score = 65.2 bits (136), Expect(3) = 4e-30 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 1712 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLILVRVREADKVIFAANQLEGPAGDWW 1891 Query: 688 QQLKDSR 708 K++R Sbjct: 1892 DTYKEAR 1912 Score = 33.6 bits (67), Expect(3) = 4e-30 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +2 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ GH+ANKC Sbjct: 2390 QNRAPAPNQAATGSVRPGSCFNCGEYGHFANKC 2488 Score = 36.3 bits (73), Expect(2) = 4e-05 Identities = 22/53 (41%), Positives = 25/53 (47%) Frame = -2 / -3 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT + QSSAS G S NV Sbjct: 1905 SLYVSHQSPAGPSNWFAAKITLSASRTRTRISFFSMILNQSSASIGSSAVANV 1747 Score = 31.8 bits (63), Expect(2) = 4e-05 Identities = 23/70 (32%), Positives = 35/70 (50%) Frame = -1 / -2 Query: 936 ILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVV 757 +++QA E V L L + I V QL + VL+H L +PEL+ + GR+ V Sbjct: 2146 LVIQAFNEFVNLFLFVGKISSCVARQLSETVQVLLHCGIPLP*SPELILLHPHHRGRHEV 1967 Query: 756 GSEVTTKLVP 727 +E K +P Sbjct: 1966 VTEGCGKFLP 1937
>LOC_Os11g18620:12011.t01633:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3015 Score = 89.0 bits (188), Expect(3) = 5e-30 Identities = 37/107 (34%), Positives = 63/107 (58%) Frame = +1 / +2 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + R +FRRL+QG+ +V +Y F +LARYA+ D+ D++ K Sbjct: 1898 TWEEFTAAFRENFVPTAVMRMKRNEFRRLRQGNTTVQEYLNRFTQLARYAIGDLADEEEK 2077 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 2078 IDKFIEGLNDELRGPMIGQDQESFQSLINKVVRLENDQRTVEHNRKR 2218 Score = 59.3 bits (123), Expect(3) = 5e-30 Identities = 24/67 (35%), Positives = 36/67 (53%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + D+P +AEDW+R + VR D V FA L+G A WW Sbjct: 1676 SSFGEFMRTKPPTFATVDEPMEAEDWLRIIENKLTLVRVREADKVIFAVN*LEGPAGDWW 1855 Query: 688 QQLKDSR 708 K++R Sbjct: 1856 DTYKEAR 1876 Score = 32.7 bits (65), Expect(3) = 5e-30 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +2 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 2402 NVDCLNCGEYGHYANNC 2452 Score = 33.1 bits (66), Expect(2) = 5e-04 Identities = 21/68 (30%), Positives = 35/68 (51%) Frame = -1 / -3 Query: 690 LPPNRSLPLQLECCKLDIILWTHIATLEMLVHITDPIFRVKRLVARSERPKLV*QELTQT 511 +PP S LQL C+ + + + + +++ T PIF + RLV RSER L +L++ Sbjct: 1858 IPPITSGSLQLIYCEDHFVGFAYPDKGQFILYDT*PIFCLHRLVYRSERGWLGPHKLSKA 1679 Query: 510 GEVIATLL 487 L+ Sbjct: 1678 RSAAVALV 1655 Score = 31.3 bits (62), Expect(2) = 5e-04 Identities = 19/71 (26%), Positives = 35/71 (49%) Frame = -1 / -3 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q+++Q ELV L I + + GQL + + +HR L Q +L+ + R+ Sbjct: 2113 QLIIQPFYELVDLFFFICEVSNCIAGQLSESVQIFLHRCVPLSQPSKLVPLHTHYRSRHE 1934 Query: 759 VGSEVTTKLVP 727 V ++ ++L P Sbjct: 1933 VLAKCCSELFP 1901
>LOC_Os11g27050:12011.t02320:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4917 Score = 84.9 bits (179), Expect(3) = 5e-30 Identities = 35/107 (32%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA +D+ D++ K Sbjct: 358 NWEEFTIAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATRDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 63.4 bits (132), Expect(3) = 5e-30 Identities = 25/67 (37%), Positives = 37/67 (55%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K V D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVPEADKVIFAANQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DMYKEAR 336 Score = 34.1 bits (68), Expect(3) = 5e-30 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ GH+ANKC Sbjct: 814 QNRSPAPNQAATGSVRPGSCFNCGEYGHFANKC 912 Score = 33.1 bits (66), Expect = 6.1 Identities = 21/53 (39%), Positives = 24/53 (45%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ T + QSSAS G S NV Sbjct: 329 SLYMSHQSPAGPSNWFAAKITLSASGTRTRVSFFSMILNQSSASIGSSAVANV 171
>LOC_Os03g41710:12003.t03580:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3254 Score = 83.1 bits (175), Expect(3) = 8e-30 Identities = 34/107 (31%), Positives = 62/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 SW+EF FR +++P++ + + +FRR++QG+ ++ +Y F +LARYA D+ D++ K Sbjct: 358 SWEEFTTAFRDNFMPAAVMRMKKNEFRRVRQGNTTIQEYLNRFTQLARYATGDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 64.3 bits (134), Expect(3) = 8e-30 Identities = 25/67 (37%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DA+DW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAKDWLRIIEKKLTLVRVREADKVIFAVNQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 33.1 bits (66), Expect(3) = 8e-30 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q Q P Q +C CG+ GH+ANKC Sbjct: 814 QTQAPTPNQAATGSVRPGSCFNCGEYGHFANKC 912 Score = 81.3 bits (171), Expect = 2e-14 Identities = 35/111 (31%), Positives = 61/111 (54%) Frame = +1 / +3 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G+ ++W+EF + F +IP+ V + +FR LKQ +V +Y EF+ LARYA +DV Sbjct: 2511 GQPITWEEFTKGFNKTHIPAGVVALKKREFRTLKQKDRTVAEYLHEFNRLARYAPEDVRT 2690 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GLK++L + L HD +F + + ++N K++ Sbjct: 2691 DEERQEKFLEGLKDELSVTLISHDYVDFQQLVDKAIRLEDKKNRIDNRKRK 2843 Score = 47.3 bits (97), Expect = 3e-04 Identities = 31/102 (30%), Positives = 50/102 (49%) Frame = -1 / -1 Query: 1032 VLHPEQGCLCSES*VIEFVKLLRIVQSEC*LQILLQATPELVYLTLLIRNILQRVTGQLV 853 V++P S V + +K+ +++ +C Q +LQA EL+ L+ +I +T Q + Sbjct: 2831 VIYPVLLVFKSNCFVNQLLKINIVMRDQCN*QFILQAFQELLLPFLVSTHIFWSITCQTI 2652 Query: 852 KLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 +L +L H LLQ PEL N + R + E KL P Sbjct: 2651 ELMKILCHGTILLLQCPELTLLQSNNSCRYMCLIESFCKLFP 2526 Score = 40.9 bits (83), Expect = 0.028 Identities = 25/71 (35%), Positives = 42/71 (59%) Frame = -1 / -3 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q+++QA ELV L LL+ I VT QL + VL++ +L +PEL+ + +GR+ Sbjct: 573 QLVVQAFDELVDLFLLVGKISSCVTRQLSETV*VLLYSGISLSYSPELILLHSHHSGRHE 394 Query: 759 VGSEVTTKLVP 727 V +E ++ +P Sbjct: 393 VVTEGCSEFLP 361
>LOC_Os01g34250:12001.t02985:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 85.8 bits (181), Expect(2) = 9e-30 Identities = 36/107 (33%), Positives = 62/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 SW+EF FR +++P++ + + +FRRL+QG+ S+ +Y F +LARYA D+ D++ K Sbjct: 358 SWEEFTIAFRDNFVPTAVMRMKKNEFRRLRQGNTSIQEYLNRFTQLARYATGDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 66.1 bits (138), Expect(2) = 9e-30 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 42.8 bits (87), Expect = 0.008 Identities = 26/71 (36%), Positives = 43/71 (60%) Frame = -1 / -1 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q+++QA ELV L LL+ I RVT QL + VL++R +L +PEL+ + + R+ Sbjct: 573 QLVVQAFDELVDLFLLVGKISSRVTRQLSETVQVLLYRGISLP*SPELILLHSHHSSRHE 394 Query: 759 VGSEVTTKLVP 727 V +E ++ +P Sbjct: 393 VVTEGYSEFLP 361 Score = 30.9 bits (61), Expect(2) = 0.89 Identities = 20/48 (41%), Positives = 22/48 (45%) Frame = +2 / +2 Query: 797 SSGA*SRAAILCTSTMLSFTSWPVTRCRMFRIRRVRYTSSGVA*RRIC 940 SSG + L ST SW VTR + RR R TSS A* C Sbjct: 431 SSGDYGKEIPLYKST*TVSLSWRVTRLEILPTRRKRSTSSSKA*TTSC 574 Score = 28.6 bits (56), Expect(2) = 0.89 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C G+ GH+ANKC Sbjct: 814 QNRAPAPNQAATGSVRPGSCFNYGEYGHFANKC 912
>LOC_Os11g38820:12011.t03425:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5614 Score = 87.7 bits (185), Expect(3) = 9e-30 Identities = 36/107 (33%), Positives = 64/107 (59%) Frame = +1 / +2 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y +F +LARYA+ D+ D++ K Sbjct: 1928 TWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLADEEEK 2107 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 2108 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKR 2248 Score = 60.6 bits (126), Expect(3) = 9e-30 Identities = 24/67 (35%), Positives = 37/67 (55%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + D+P +A+DW+R + K VR D V FA QL+ A WW Sbjct: 1706 SSFGEFMRTKPPTFATADEPMEAKDWLRIIEKKLTLVRVREADKVIFAVNQLERPAGDWW 1885 Query: 688 QQLKDSR 708 K++R Sbjct: 1886 DTYKEAR 1906 Score = 33.6 bits (67), Expect(3) = 9e-30 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +2 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 2432 NVDCFNCGEYGHYANNC 2482 Score = 29.9 bits (59), Expect(2) = 0.035 Identities = 20/65 (30%), Positives = 32/65 (49%) Frame = -1 / -1 Query: 708 SGILKLLPPNRSLPLQLECCKLDIILWTHIATLEMLVHITDPIFRVKRLVARSERPKLV* 529 SG L +PP S QL C+ ++ + + + L + P+F LV SER +L Sbjct: 1906 SGFLVGIPPITSGSFQLVHCEDHLVGFAYPD*SQFLFYDA*PVFCFHGLVGSSERGRLGS 1727 Query: 528 QELTQ 514 EL++ Sbjct: 1726 HELSK 1712 Score = 28.1 bits (55), Expect(2) = 0.035 Identities = 19/71 (26%), Positives = 36/71 (50%) Frame = -1 / -1 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q ++Q+ ELV L I + V QL +L +L+H L Q+ +L+ + R Sbjct: 2143 QFIIQSFYELVDLFFFICQVSNCVASQLSELV*ILLHCCIPLPQSSKLVLLHAHHCSRYE 1964 Query: 759 VGSEVTTKLVP 727 + ++ ++L+P Sbjct: 1963 ILAKRRSELLP 1931
>LOC_Os03g44360:12003.t03824:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4321 Score = 82.6 bits (174), Expect(3) = 1e-29 Identities = 35/107 (32%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y +F +LARYA+ D+ D++ K Sbjct: 358 TWEEFTTVFRENFVPAAVMRMKKNEFRRLRQGNATVQEYLNQFTQLARYAIGDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++ R Sbjct: 538 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNR*R 678 Score = 64.8 bits (135), Expect(3) = 1e-29 Identities = 25/66 (37%), Positives = 37/66 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + D+P +AEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFEEFMRTKPPTFATADEPMEAEDWLRIIEKKLTLVRVREADKVIFAVHQLEGPAGDWW 315 Query: 688 QQLKDS 705 K++ Sbjct: 316 DTYKEA 333 Score = 33.6 bits (67), Expect(3) = 1e-29 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +3 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 861 NVDCFNCGEYGHYANNC 911 Score = 35.0 bits (70), Expect(2) = 2e-04 Identities = 19/49 (38%), Positives = 28/49 (57%) Frame = -1 / -2 Query: 690 LPPNRSLPLQLECCKLDIILWTHIATLEMLVHITDPIFRVKRLVARSER 544 +PP S LQL C+ + + + + L++ T PIF + RLV RSER Sbjct: 318 IPPITSGSLQLVYCEDHFVGFAYPDKGQFLLYDT*PIFCLHRLVCRSER 172 Score = 31.3 bits (62), Expect(2) = 2e-04 Identities = 22/88 (25%), Positives = 43/88 (48%) Frame = -1 / -2 Query: 990 VIEFVKLLRIVQSEC*LQILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALL 811 V + ++ L ++ + Q ++Q ELV L L I + + GQL +L + +HR L Sbjct: 624 VDQALEALMVLPNHRSTQFIIQPFYELVDLFLFICEVSNCIAGQLSELVQIFLHRCVPLS 445 Query: 810 QAPELLTHLLNKTGRNVVGSEVTTKLVP 727 +L+ + R+ V ++ ++L P Sbjct: 444 *PSKLVLLHTHYRSRHEVLAKYCSELFP 361
>LOC_Os04g14000:12004.t01220:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2565 Score = 82.6 bits (174), Expect(3) = 1e-29 Identities = 35/107 (32%), Positives = 61/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF F +++P++ + + +FRRL+QG+ +V +Y F +LARYA D+ D++ K Sbjct: 349 TWEEFTTAFHENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATGDLIDEEEK 528 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 529 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQKTVEHNRKR 669 Score = 63.8 bits (133), Expect(3) = 1e-29 Identities = 25/67 (37%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P +AEDW+R + K VR D V FA QL+G A WW Sbjct: 127 SSFGEFMRTKPPTFATAEEPMEAEDWLRIIEKKLTLVRVREADKVIFAINQLEGPAGDWW 306 Query: 688 QQLKDSR 708 K++R Sbjct: 307 DTYKEAR 327 Score = 32.7 bits (65), Expect(3) = 1e-29 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +1 / +2 Query: 1255 TCHKCGQKGHYANKC 1299 +C CG+ GHYAN C Sbjct: 890 SCFNCGEPGHYANNC 934 Score = 29.0 bits (57), Expect(2) = 0.22 Identities = 20/71 (28%), Positives = 33/71 (46%) Frame = -1 / -1 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q ++Q ELV L I I + GQL K + +H +L Q EL+ + R+ Sbjct: 564 QFIIQPFNELVNFLLFIYEIPCCIAGQLSKPVQIFLHCCVSLPQPSELVLLHAHHRSRHE 385 Query: 759 VGSEVTTKLVP 727 V + +++ P Sbjct: 384 VLMKSSSEFFP 352 Score = 26.3 bits (51), Expect(2) = 0.22 Identities = 19/68 (27%), Positives = 30/68 (44%) Frame = -1 / -1 Query: 690 LPPNRSLPLQLECCKLDIILWTHIATLEMLVHITDPIFRVKRLVARSERPKLV*QELTQT 511 +PP LQL C+ + + + + L + PIF + R RSE L EL + Sbjct: 309 VPPITGWSLQLVNCEDHFVGFAYPNQSQFLFYDA*PIFSLHRFFRRSEGGWLSPHELAKA 130 Query: 510 GEVIATLL 487 A+L+ Sbjct: 129 *ASTASLV 106
>LOC_Os05g29120:12005.t02561:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5739 Score = 87.7 bits (185), Expect(3) = 1e-29 Identities = 36/107 (33%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + KFRRL+QG+ ++ +Y F +LARYA D+PD++ K Sbjct: 1687 NWEEFTTAFRDNFVPAAVMRMKKNKFRRLRQGNTTIQEYLNRFTQLARYATGDLPDEEEK 1866 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 1867 IDKFIKGLNDELRGPMIGQDHDSF*SLINKVVRLENDQKVVEHNRKR 2007 Score = 61.1 bits (127), Expect(3) = 1e-29 Identities = 25/67 (37%), Positives = 37/67 (55%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+ A WW Sbjct: 1465 SSFGEFMRTKPPTFATDEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEEPAGDWW 1644 Query: 688 QQLKDSR 708 K++R Sbjct: 1645 DTYKEAR 1665 Score = 32.7 bits (65), Expect(3) = 1e-29 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +1 / +1 Query: 1255 TCHKCGQKGHYANKC 1299 +C CG+ GH+ANKC Sbjct: 2197 SCFNCGEYGHFANKC 2241 Score = 39.1 bits (79), Expect = 0.098 Identities = 24/71 (33%), Positives = 41/71 (57%) Frame = -1 / -1 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q+++Q E V L LL+ I RVT QL + VL++ +L +PEL+ + +GR+ Sbjct: 1902 QLVVQTFDEFVDLFLLVGKISSRVTRQLGETVQVLLYSGISLP*SPELILLHSHHSGRHE 1723 Query: 759 VGSEVTTKLVP 727 V +E ++ +P Sbjct: 1722 VVTEGRSEFLP 1690
>LOC_Os11g39950:12011.t03537:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5862 Score = 87.7 bits (185), Expect(3) = 1e-29 Identities = 36/107 (33%), Positives = 64/107 (59%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y +F +LARYA+ D+ D++ K Sbjct: 1933 TWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYAIGDLADEEEK 2112 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 2113 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKR 2253 Score = 60.2 bits (125), Expect(3) = 1e-29 Identities = 25/67 (37%), Positives = 37/67 (55%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAED +R + K VR D V FA QL+G A WW Sbjct: 1711 SSFGEFMRTKPPTFATAEEPMDAEDCLRVIEKKLTLVRVREADKVIFAANQLEGPAGDWW 1890 Query: 688 QQLKDSR 708 K++R Sbjct: 1891 DTYKEAR 1911 Score = 33.6 bits (67), Expect(3) = 1e-29 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +1 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 2437 NVDCFNCGEYGHYANNC 2487 Score = 36.8 bits (74), Expect(2) = 3e-05 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT ++ QSSAS G S NV Sbjct: 1904 SL*VSHQSPAGPSNWFAAKITLSASRTRTRVSFFSMTLKQSSASIGSSAVANV 1746 Score = 31.8 bits (63), Expect(2) = 3e-05 Identities = 21/71 (29%), Positives = 36/71 (50%) Frame = -1 / -1 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q ++Q ELV L I + V GQL +L +L+H L Q+ +L+ + R Sbjct: 2148 QFIIQPFYELVDLFFFICQVSNCVAGQLSELVQILLHCCIPLPQSSKLVLLHAHHCSRYE 1969 Query: 759 VGSEVTTKLVP 727 V ++ ++L+P Sbjct: 1968 VLAKCCSELLP 1936
>LOC_Os07g20330:12007.t01838:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 4413 Score = 80.8 bits (170), Expect(3) = 3e-29 Identities = 34/107 (31%), Positives = 61/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF F +++P++ + + +FRRL+QG+ +V +Y F +LARYA D+ D++ K Sbjct: 358 NWEEFTTAFCDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATGDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 66.1 bits (138), Expect(3) = 3e-29 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 32.7 bits (65), Expect(3) = 3e-29 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +1 / +1 Query: 1255 TCHKCGQKGHYANKC 1299 +C CG+ GH+ANKC Sbjct: 868 SCFNCGEYGHFANKC 912 Score = 36.3 bits (73), Expect = 0.66 Identities = 22/53 (41%), Positives = 25/53 (47%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT + QSSAS G S NV Sbjct: 329 SLYVSHQSPAGPSNWFAAKITLSASRTRTRVSFFSMILNQSSASIGSSAVANV 171
>LOC_Os01g23200:12001.t02047:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4338 Score = 84.0 bits (177), Expect(2) = 3e-29 Identities = 35/107 (32%), Positives = 62/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA +D+ D++ K Sbjct: 283 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLQQGNTTVQEYLNRFTQLARYATRDLADEEEK 462 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL + L+ + D + F N VE+++KR Sbjct: 463 IDKFIEGLNDKLRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 603 Score = 66.1 bits (138), Expect(2) = 3e-29 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 61 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWW 240 Query: 688 QQLKDSR 708 K++R Sbjct: 241 DTYKEAR 261 Score = 36.3 bits (73), Expect = 0.66 Identities = 22/53 (41%), Positives = 25/53 (47%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT + QSSAS G S NV Sbjct: 254 SLYVSHQSPAGPSNWFAAKITLSASRTRTRVSFFSMILNQSSASIGSSAVANV 96
>LOC_Os11g19910:12011.t01761:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4414 Score = 83.1 bits (175), Expect(3) = 5e-29 Identities = 34/107 (31%), Positives = 62/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF F+ +++P++ + + +FRR++QG+ +V +Y F +LARYA+ D+ D++ K Sbjct: 358 TWEEFTAAFQENFVPAAVMRMKKNEFRRMRQGNTTVQEYLNRFTQLARYAIGDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE++ KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNHKR 678 Score = 62.0 bits (129), Expect(3) = 5e-29 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TFT+ D+P +AEDW+R + K VR D V FA QL+G A W Sbjct: 136 SSFGEFMRTKPPTFTTADEPMEAEDWLRIIEKKLTLVRVREADKVIFAVNQLEGPAGDRW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 33.6 bits (67), Expect(3) = 5e-29 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +1 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 862 NVDCFNCGEYGHYANNC 912 Score = 36.3 bits (73), Expect(2) = 4e-04 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -2 / -3 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL H A P +W A +T S+ RT + R QSSAS G S VNV Sbjct: 329 SL*VSHLSPAGPSSWFTAKITLSASRTRTRVSFFSMMRSQSSASMGSSAVVNV 171 Score = 28.6 bits (56), Expect(2) = 4e-04 Identities = 21/88 (23%), Positives = 41/88 (46%) Frame = -1 / -2 Query: 990 VIEFVKLLRIVQSEC*LQILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALL 811 V + ++ L ++ + Q ++Q ELV L L I + + GQL + + +HR L Sbjct: 624 VDQALEALMVLPNHRSAQFIIQPFYELVDLFLFICEVSNCIAGQLSEPVQIFLHRCVPLS 445 Query: 810 QAPELLTHLLNKTGRNVVGSEVTTKLVP 727 +L+ + R+ V + ++L P Sbjct: 444 HPSKLVLLHTHYRSRHEVLLKCCSELFP 361
>LOC_Os07g11860:12007.t01059:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5706 Score = 83.5 bits (176), Expect(3) = 8e-29 Identities = 34/107 (31%), Positives = 62/107 (57%) Frame = +1 / +3 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF F +++P++ + + +FRRL+QG+ +V +Y F ++ARYA+ D+ D++ K Sbjct: 1704 TWEEFTAAFHENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQVARYAIGDLADEEEK 1883 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 1884 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKR 2024 Score = 63.4 bits (132), Expect(3) = 8e-29 Identities = 25/67 (37%), Positives = 36/67 (53%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF D+P +AEDW+R + K VR D V F QL+G A WW Sbjct: 1482 SSFGEFMRTKPPTFAMADEPMEAEDWLRIIEKKLTLVRVREADKVIFVVNQLEGPAGDWW 1661 Query: 688 QQLKDSR 708 K++R Sbjct: 1662 DTYKEAR 1682 Score = 31.8 bits (63), Expect(3) = 8e-29 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +1 / +3 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHY N C Sbjct: 2208 NVDCFNCGEYGHYTNNC 2258
>LOC_Os07g33500:12007.t03029:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 84.0 bits (177), Expect(3) = 9e-29 Identities = 34/107 (31%), Positives = 63/107 (58%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL++G+ +V +Y F +LARYA +D+ D++ K Sbjct: 358 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLRKGNTTVQEYLNRFTQLARYATRDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 63.8 bits (133), Expect(3) = 9e-29 Identities = 25/67 (37%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR + V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREANKVIFAANQLEGPAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 29.9 bits (59), Expect(3) = 9e-29 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ H+ANKC Sbjct: 814 QNRAPAPNQAATGSVRTGSCFNCGEYEHFANKC 912 Score = 33.6 bits (67), Expect = 4.4 Identities = 21/53 (39%), Positives = 24/53 (45%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T + RT + QSSAS G S NV Sbjct: 329 SLYVSHQSPAGPSNWFAAKITLLASRTRTRVSFFSMILNQSSASIGSSAVANV 171
>LOC_Os06g36540:12006.t03350:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4214 Score = 84.5 bits (178), Expect(4) = 1e-28 Identities = 40/108 (37%), Positives = 59/108 (54%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V ++KFR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 399 ITWLEFTAAFRKTHIPSGVVSLKKKKFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 578 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 579 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 722 Score = 52.4 bits (108), Expect(4) = 1e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 189 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 368 Query: 694 LKDSR 708 + +R Sbjct: 369 FRLNR 383 Score = 34.1 bits (68), Expect(4) = 1e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +3 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 939 VVCFNCGDPGHYADKCPKPRRV 1004 Score = 28.1 bits (55), Expect(4) = 1e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1050 ARVNHVAAAEAQDAPDVIL 1106
>LOC_Os06g37935:12006.t03489:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 88.1 bits (186), Expect(3) = 1e-28 Identities = 39/111 (35%), Positives = 62/111 (55%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LARYA +DV Sbjct: 427 GHTITWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLARYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(3) = 1e-28 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 28.1 bits (55), Expect(3) = 1e-28 Identities = 8/26 (30%), Positives = 13/26 (50%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKC 1299 PQ+ + C+ C + GHY+ C Sbjct: 1147 PQMDSSAKKTLICYNCKEPGHYSRDC 1224
>LOC_Os06g37908:12006.t03486:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 88.1 bits (186), Expect(3) = 1e-28 Identities = 39/111 (35%), Positives = 62/111 (55%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LARYA +DV Sbjct: 427 GHTITWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLARYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(3) = 1e-28 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 28.1 bits (55), Expect(3) = 1e-28 Identities = 8/26 (30%), Positives = 13/26 (50%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKC 1299 PQ+ + C+ C + GHY+ C Sbjct: 1147 PQMDSSAKKTLICYNCKEPGHYSRDC 1224
>LOC_Os11g30860:12011.t02686:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3012 Score = 79.4 bits (167), Expect(3) = 1e-28 Identities = 33/107 (30%), Positives = 61/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +F RL+QG+ ++ +Y F +LARYA D+ D++ K Sbjct: 358 NWEEFTTAFRDNFVPAAVMRMKKNEFMRLRQGNTTIQEYLNCFTQLARYATGDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 63.8 bits (133), Expect(3) = 1e-28 Identities = 25/67 (37%), Positives = 37/67 (55%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P D EDW+R + K VR D V FA QL+G A WW Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDVEDWLRIIEKKLTLVRVREADKVIFAVNQLEGLAGDWW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 32.7 bits (65), Expect(3) = 1e-28 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +1 / +3 Query: 1255 TCHKCGQKGHYANKC 1299 +C CG+ GH+ANKC Sbjct: 867 SCFNCGEYGHFANKC 911 Score = 34.1 bits (68), Expect = 3.2 Identities = 21/53 (39%), Positives = 24/53 (45%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P +W A +T S+ RTL I QSS S G S V Sbjct: 329 SL*VSHQSPASPSSWFTAKITLSASRTLTRVSFFSIILSQSSTSIGSSAVAKV 171
>LOC_Os01g25688:12001.t02284:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2442 Score = 81.7 bits (172), Expect(2) = 1e-28 Identities = 33/107 (30%), Positives = 62/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +F+RL+QG+ +V +Y F +LARYA D+ D++ K Sbjct: 1933 NWEEFTTAFRDNFVPAAVMRMKKNEFKRLRQGNTTVQEYLNRFTQLARYATGDLADEEEK 2112 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N +E+++KR Sbjct: 2113 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVMEHNRKR 2253 Score = 66.1 bits (138), Expect(2) = 1e-28 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 1711 SSFGEFMRTKPPTFATAEEPMDAEDWLRVIEKKLTLVRVREADKVIFAANQLEGPAGDWW 1890 Query: 688 QQLKDSR 708 K++R Sbjct: 1891 DTYKEAR 1911 Score = 37.7 bits (76), Expect = 0.25 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT ++ QSSAS G S NV Sbjct: 1904 SLYVSHQSPAGPSNWFAAKITLSASRTRTRVSFFSMTLNQSSASIGSSAVANV 1746
>LOC_Os08g38940:12008.t03628:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4543 Score = 84.5 bits (178), Expect(3) = 2e-28 Identities = 35/107 (32%), Positives = 62/107 (57%) Frame = +1 / +2 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA D+ D++ K Sbjct: 1895 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATGDLADEEEK 2074 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 2075 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 2215 Score = 59.7 bits (124), Expect(3) = 2e-28 Identities = 24/67 (35%), Positives = 36/67 (53%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DA DW+R + K VR D V F QL+G A WW Sbjct: 1673 SSFGEFMRTKPPTFATAEEPMDA*DWLRVIEKKLTLVRVREADKVIFEANQLEGPAGDWW 1852 Query: 688 QQLKDSR 708 K++R Sbjct: 1853 DTYKEAR 1873 Score = 32.7 bits (65), Expect(3) = 2e-28 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +1 / +2 Query: 1255 TCHKCGQKGHYANKC 1299 +C CG+ GH+ANKC Sbjct: 2405 SCFNCGEYGHFANKC 2449
>LOC_Os06g21050:12006.t01922:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3901 Score = 83.1 bits (175), Expect(4) = 2e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 52.4 bits (108), Expect(4) = 2e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 2e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 2e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os04g05710:12004.t00452:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5141 Score = 83.1 bits (175), Expect(2) = 2e-28 Identities = 34/107 (31%), Positives = 62/107 (57%) Frame = +1 / +3 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ ++ +Y F +LARYA D+ D++ K Sbjct: 1110 NWEEFTTAFRDNFVPAAVMRMKKNEFRRLQQGNTTIQEYLNRFTQLARYATGDLADEEEK 1289 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F + N VE++ KR Sbjct: 1290 IDKFIEGLNDELRGPMIGQDHDSFQRLINKVVRLENDRKVVEHNHKR 1430 Score = 64.3 bits (134), Expect(2) = 2e-28 Identities = 25/67 (37%), Positives = 37/67 (55%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V F QL+G A WW Sbjct: 888 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVRKADKVIFTANQLEGPAGDWW 1067 Query: 688 QQLKDSR 708 K++R Sbjct: 1068 DTYKEAR 1088
>LOC_Os07g05984:12007.t00481:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2021 Score = 82.6 bits (174), Expect(2) = 2e-28 Identities = 34/107 (31%), Positives = 63/107 (58%) Frame = +1 / +3 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA +D+ +++ K Sbjct: 1674 NWEEFTTAFRDNFMPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYATRDLANEEEK 1853 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 1854 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKVVEHNRKR 1994 Score = 64.8 bits (135), Expect(2) = 2e-28 Identities = 26/67 (38%), Positives = 37/67 (55%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF ++P DAEDW+R + K VR D V FA QL+G A WW Sbjct: 1452 SSFGEFMRTKPPTFAIAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWW 1631 Query: 688 QQLKDSR 708 K++R Sbjct: 1632 DTYKEAR 1652 Score = 36.3 bits (73), Expect = 0.66 Identities = 22/53 (41%), Positives = 25/53 (47%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P NW A +T S+ RT + QSSAS G S NV Sbjct: 1645 SLYVSHQSPAGPSNWFAAKITLSASRTRTRVSFFSMILNQSSASIGSSAMANV 1487
>LOC_Os02g16190:12002.t01412:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 82.6 bits (174), Expect(4) = 2e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNHMEQKKRR 711 Score = 52.4 bits (108), Expect(4) = 2e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 2e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 29.0 bits (57), Expect(4) = 2e-28 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIMAVH 1443 ARVN V AAEA+++ DVI V+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIFLVN 1104
>LOC_Os10g11702:12010.t00967:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4428 Score = 83.1 bits (175), Expect(4) = 2e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 394 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 573 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 574 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 717 Score = 52.4 bits (108), Expect(4) = 2e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 184 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 363 Query: 694 LKDSR 708 + +R Sbjct: 364 FRLNR 378 Score = 34.1 bits (68), Expect(4) = 2e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 934 VVCFNCGDPGHYADKCPKPRRV 999 Score = 28.6 bits (56), Expect(4) = 2e-28 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIMAV 1440 ARVN V AAEA+++ DVI+ + Sbjct: 1045 ARVNHVAAAEAQDAPDVILGM 1107
>LOC_Os07g25340:12007.t02230:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5388 Score = 81.3 bits (171), Expect(2) = 3e-28 Identities = 35/107 (32%), Positives = 62/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+ G+ +V +Y +F +LARYA+ D+ D++ K Sbjct: 1333 TWEEFTVAFRENFVPAAVMRMKKNEFRRLR*GNTTVQEYLNKFTQLARYAIGDLADEEEK 1512 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL + L+ + D E F N VE+++KR Sbjct: 1513 IDKFIEGLNDGLRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKR 1653 Score = 65.7 bits (137), Expect(2) = 3e-28 Identities = 26/67 (38%), Positives = 38/67 (56%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + D+P +AEDW+R + K VR D V FA QL+G A WW Sbjct: 1111 SSFGEFMRTKPPTFATADEPMEAEDWLRIIEKKLTLVRVREADKVIFAVNQLEGPARDWW 1290 Query: 688 QQLKDSR 708 K++R Sbjct: 1291 DTYKEAR 1311 Score = 39.6 bits (80), Expect(2) = 4e-05 Identities = 23/53 (43%), Positives = 27/53 (50%) Frame = -2 / -2 Query: 701 SLSCCHQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 SL HQ A P +W A +T S+ RTL + R QSSAS G S NV Sbjct: 1304 SL*VSHQSLAGPSSWFTAKITLSASRTLTRVSFFSMMRSQSSASMGSSAVANV 1146 Score = 28.6 bits (56), Expect(2) = 4e-05 Identities = 20/71 (28%), Positives = 35/71 (49%) Frame = -1 / -1 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q ++Q+ ELV L L I + + G L +L + +HR L Q +L+ + R Sbjct: 1548 QSIIQSFYELVDLFLFICEVSNCIAG*LSELVQIFLHRCIPLSQPSKLVLLHTHYCSRYE 1369 Query: 759 VGSEVTTKLVP 727 V ++ ++L P Sbjct: 1368 VLAKCYSELFP 1336
>LOC_Os04g13330:12004.t01154:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 89.0 bits (188), Expect(2) = 3e-28 Identities = 40/111 (36%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V KY EF+ LARYA +DV Sbjct: 427 GHTITWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTKYLHEFYRLARYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYENFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 3e-28 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os09g01230:12009.t00025:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4423 Score = 83.1 bits (175), Expect(4) = 3e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 52.4 bits (108), Expect(4) = 3e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 3e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 3e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os11g31230:12011.t02723:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2208 Score = 85.8 bits (181), Expect(4) = 3e-28 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 625 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 804 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 805 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 894 Score = 51.9 bits (107), Expect(4) = 3e-28 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 409 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 588 Query: 688 Q 690 + Sbjct: 589 E 591 Score = 33.6 bits (67), Expect(4) = 3e-28 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 1165 PSAVQCFRCNQMGHYARQC 1221 Score = 23.1 bits (44), Expect(4) = 3e-28 Identities = 8/20 (40%), Positives = 14/20 (70%) Frame = +1 / +1 Query: 1381 RVNMVNAAEAENSSDVIMAV 1440 RVN + A A+++ DV+M + Sbjct: 1363 RVNHIQAETAQDAPDVVMGM 1422
>LOC_Os01g39930:12001.t03519:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4368 Score = 82.2 bits (173), Expect(4) = 4e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNCMEQRKRR 711 Score = 52.4 bits (108), Expect(4) = 4e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 4e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.6 bits (56), Expect(4) = 4e-28 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIMAV 1440 ARVN V AAEA+++ DVI+ + Sbjct: 1039 ARVNHVAAAEAQDAPDVILGM 1101
>LOC_Os05g17130:12005.t01482:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3565 Score = 88.6 bits (187), Expect(2) = 4e-28 Identities = 39/111 (35%), Positives = 62/111 (55%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LARYA +DV Sbjct: 427 GHTITWNEFSSAFRRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLARYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 4e-28 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os06g24960:12006.t02304:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2604 Score = 81.3 bits (171), Expect(3) = 4e-28 Identities = 34/107 (31%), Positives = 61/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF F +++P++ + + +FRRL QG+ +V +Y F +LARYA +D+ D++ K Sbjct: 358 NWEEFTTAFLDNFVPAAVMRMKKNEFRRLWQGNTTVQEYLNRFTQLARYATRDLADEEEK 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIKGLNDELRGPMIRQDHDSFQSLINKVVRLENDRKVVEHNRKR 678 Score = 58.8 bits (122), Expect(3) = 4e-28 Identities = 25/67 (37%), Positives = 36/67 (53%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL G A W Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKITLVRVREADKVIFAANQLDGPAGDRW 315 Query: 688 QQLKDSR 708 K++R Sbjct: 316 DTYKEAR 336 Score = 34.1 bits (68), Expect(3) = 4e-28 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ GH+ANKC Sbjct: 814 QNRAPAPNQATTGSVRPESCFNCGEYGHFANKC 912
>LOC_Os12g29000:12012.t02610:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4420 Score = 82.6 bits (174), Expect(4) = 4e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 385 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 564 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 565 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 708 Score = 52.4 bits (108), Expect(4) = 4e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 175 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 354 Query: 694 LKDSR 708 + +R Sbjct: 355 FRLNR 369 Score = 34.1 bits (68), Expect(4) = 4e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 925 VVCFNCGDPGHYADKCPKPRRV 990 Score = 28.1 bits (55), Expect(4) = 4e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1036 ARVNHVAAAEAQDAPDVIL 1092
>LOC_Os12g28970:12012.t02607:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4419 Score = 82.6 bits (174), Expect(4) = 4e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 385 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 564 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 565 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 708 Score = 52.4 bits (108), Expect(4) = 4e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 175 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 354 Query: 694 LKDSR 708 + +R Sbjct: 355 FRLNR 369 Score = 34.1 bits (68), Expect(4) = 4e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 925 VVCFNCGDPGHYADKCPKPRRV 990 Score = 28.1 bits (55), Expect(4) = 4e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1036 ARVNHVAAAEAQDAPDVIL 1092
>LOC_Os12g31250:12012.t02829:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 82.6 bits (174), Expect(4) = 4e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 52.4 bits (108), Expect(4) = 4e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 4e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 4e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os12g30400:12012.t02747:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 82.6 bits (174), Expect(4) = 4e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 52.4 bits (108), Expect(4) = 4e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 4e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 4e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os04g07710:12004.t00645:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 82.6 bits (174), Expect(4) = 4e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 52.4 bits (108), Expect(4) = 4e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 4e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 4e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os01g47150:12001.t04163:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4428 Score = 82.6 bits (174), Expect(4) = 4e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 394 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 573 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 574 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 717 Score = 52.4 bits (108), Expect(4) = 4e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 184 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 363 Query: 694 LKDSR 708 + +R Sbjct: 364 FRLNR 378 Score = 34.1 bits (68), Expect(4) = 4e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 934 VVCFNCGDPGHYADKCPKPRRV 999 Score = 28.1 bits (55), Expect(4) = 4e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1045 ARVNHVAAAEAQDAPDVIL 1101
>LOC_Os10g29490:12010.t02292:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6932 Score = 91.3 bits (193), Expect(3) = 4e-28 Identities = 38/90 (42%), Positives = 57/90 (63%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +EKF RLKQG++SV +Y F++LARYAL++V K Sbjct: 2838 IAWDEFATAFRAAHVPESTIDMKKEKFNRLKQGNSSVNEYLSMFNKLARYALEEVDSDKK 3017 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 3018 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 3107 Score = 51.9 bits (107), Expect(3) = 4e-28 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 2622 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAANWW 2801 Query: 688 Q 690 + Sbjct: 2802 E 2804 Score = 33.6 bits (67), Expect(3) = 4e-28 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +3 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 3378 PSAVQCFRCNQMGHYARQC 3434 Score = 34.5 bits (69), Expect(2) = 0.035 Identities = 19/38 (50%), Positives = 20/38 (52%) Frame = -2 / -2 Query: 839 YLYTELLPCFKRLNFSRISSTKLEGM*WDLKSRQNSSQ 726 Y T LLPC LNFS S L G * K+ NSSQ Sbjct: 2956 YSLTLLLPCLSLLNFSFFMSMVLSGT*AARKAVANSSQ 2843 Score = 23.5 bits (45), Expect(2) = 0.035 Identities = 16/41 (39%), Positives = 18/41 (43%) Frame = -2 / -2 Query: 686 HQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNG 564 HQ A P +W A S+G L S QSSAS G Sbjct: 2800 HQFAAGPLSW*EA*SVFSTGVHCTKLSFLSTSFNQSSASTG 2678
>LOC_Os08g14250:12008.t01300:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5073 Score = 83.1 bits (175), Expect(4) = 4e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 1039 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 1218 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 1219 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 1362 Score = 52.4 bits (108), Expect(4) = 4e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 829 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 1008 Query: 694 LKDSR 708 + +R Sbjct: 1009 FRLNR 1023 Score = 34.1 bits (68), Expect(4) = 4e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 1579 VVCFNCGDPGHYADKCPKPRRV 1644 Score = 28.1 bits (55), Expect(4) = 4e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1690 ARVNHVAAAEAQDAPDVIL 1746
>LOC_Os07g18770:12007.t01735:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4044 Score = 87.2 bits (184), Expect(3) = 5e-28 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG+ SV +Y +F++LARYA ++V K Sbjct: 625 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNTSVNEYLSQFNKLARYAPEEVDTDKK 804 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 805 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 894 Score = 54.2 bits (112), Expect(3) = 5e-28 Identities = 18/61 (29%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+ + F P + +A+ QL+G A+ WW Sbjct: 409 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVERKFNLVQCTPVEKTLYASHQLRGPAADWW 588 Query: 688 Q 690 + Sbjct: 589 E 591 Score = 33.6 bits (67), Expect(3) = 5e-28 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 1165 PSAVQCFRCNQMGHYARQC 1221 Score = 35.4 bits (71), Expect = 1.2 Identities = 23/63 (36%), Positives = 35/63 (55%) Frame = -1 / -1 Query: 915 ELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTK 736 EL L L+ ++L+ V QLV+L VL+ ALL+ E L +N R++ +E K Sbjct: 819 ELPDLLLVCVHLLRGVPSQLVELT*VLIDTGVALLKPVEFLFLHVNGAFRHMSCTESRGK 640 Query: 735 LVP 727 L+P Sbjct: 639 LIP 631
>LOC_Os08g05180:12008.t00412:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 82.6 bits (174), Expect(4) = 5e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 51.9 bits (107), Expect(4) = 5e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGLASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 5e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 5e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os02g38630:12002.t03501:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 82.6 bits (174), Expect(4) = 5e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 52.4 bits (108), Expect(4) = 5e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 5e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 27.6 bits (54), Expect(4) = 5e-28 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DV++ Sbjct: 1039 ARVNHVAAAEAQDAPDVVL 1095
>LOC_Os06g07290:12006.t00612:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5483 Score = 83.1 bits (175), Expect(4) = 5e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 1450 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 1629 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 1630 RQEKFLGGLNDELSYLLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 1773 Score = 52.4 bits (108), Expect(4) = 5e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 1240 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 1419 Query: 694 LKDSR 708 + +R Sbjct: 1420 FRLNR 1434 Score = 34.1 bits (68), Expect(4) = 5e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 1990 VVCFNCGDPGHYADKCPKPRRV 2055 Score = 28.1 bits (55), Expect(4) = 5e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 2101 ARVNHVAAAEAQDAPDVIL 2157
>LOC_Os09g08040:12009.t00600:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3434 Score = 86.8 bits (183), Expect(3) = 6e-28 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF F + ++P S ++ +E+F RLKQG+NSV +Y +F++LARYA ++V K Sbjct: 232 IAWDEFATAFLAAHVPESTIDMKKEEFNRLKQGNNSVNEYLSQFNKLARYAPEEVDTDKK 411 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 412 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 501 Score = 53.8 bits (111), Expect(3) = 6e-28 Identities = 18/61 (29%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL +Q F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 16 SKLTDFLRSQPPEFSQTVEPVEADDWLKDVDRKLNIVQCTPVEKTLYASHQLRGPAADWW 195 Query: 688 Q 690 + Sbjct: 196 E 198 Score = 33.6 bits (67), Expect(3) = 6e-28 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 772 PSAVQCFRCNQMGHYARQC 828 Score = 37.3 bits (75), Expect = 0.35 Identities = 22/63 (34%), Positives = 35/63 (55%) Frame = -1 / -3 Query: 915 ELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTK 736 EL L L+ + L+ V QLV+L VL+ + ALL+ + L +N R++ E +K Sbjct: 426 ELPDLLLVCVHFLRGVPSQLVELT*VLIDTVVALLKPVKFLFLHINGAFRHMSCKESRSK 247 Query: 735 LVP 727 L+P Sbjct: 246 LIP 238
>LOC_Os04g04900:12004.t00374:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 82.6 bits (174), Expect(4) = 7e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 394 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 573 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 574 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNFMEQKKRR 717 Score = 51.5 bits (106), Expect(4) = 7e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 184 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 363 Query: 694 LKDSR 708 + +R Sbjct: 364 FRLNR 378 Score = 34.1 bits (68), Expect(4) = 7e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 934 VVCFNCGDPGHYADKCPKPRRV 999 Score = 28.1 bits (55), Expect(4) = 7e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1045 ARVNHVAAAEAQDAPDVIL 1101
>LOC_Os10g20190:12010.t01513:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5477 Score = 82.6 bits (174), Expect(4) = 7e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 1443 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 1622 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 1623 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNCMEQRKRR 1766 Score = 52.4 bits (108), Expect(4) = 7e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 1233 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 1412 Query: 694 LKDSR 708 + +R Sbjct: 1413 FRLNR 1427 Score = 34.1 bits (68), Expect(4) = 7e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +3 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 1983 VVCFNCGDPGHYADKCPKPRRV 2048 Score = 28.1 bits (55), Expect(4) = 7e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 2094 ARVNHVAAAEAQDAPDVIL 2150
>LOC_Os08g12540:12008.t01133:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2923 Score = 79.0 bits (166), Expect(4) = 7e-28 Identities = 39/108 (36%), Positives = 56/108 (51%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V R++FR L QGS SV +Y EF+ LARYA +DV + Sbjct: 1551 ITWLEFTAAFRKTHIPSGVVSLKRKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRTDEE 1730 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 1731 RQEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNRMEQKKRR 1874 Score = 53.3 bits (110), Expect(4) = 7e-28 Identities = 22/65 (33%), Positives = 34/65 (52%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 1341 LANFLRVRPPTFSSTTNPVEAGDWLHTIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 1520 Query: 694 LKDSR 708 + +R Sbjct: 1521 FRLNR 1535 Score = 34.1 bits (68), Expect(4) = 7e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +3 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 2091 VVCFNCGDPGHYADKCPKPRRV 2156 Score = 28.1 bits (55), Expect(4) = 7e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 2202 ARVNHVAAAEAQDAPDVIL 2258
>LOC_Os06g03474:12006.t00240:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5536 Score = 82.6 bits (174), Expect(4) = 7e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 2589 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 2768 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 2769 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 2912 Score = 52.4 bits (108), Expect(4) = 7e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2379 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 2558 Query: 694 LKDSR 708 + +R Sbjct: 2559 FRLNR 2573 Score = 34.1 bits (68), Expect(4) = 7e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +3 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3129 VVCFNCGDPGHYADKCPKPRRV 3194 Score = 28.1 bits (55), Expect(4) = 7e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 3240 ARVNHVAAAEAQDAPDVIL 3296
>LOC_Os02g40570:12002.t03693:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5958 Score = 88.1 bits (186), Expect(3) = 7e-28 Identities = 37/90 (41%), Positives = 56/90 (62%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG+NSV +Y F++LARYA ++V K Sbjct: 1865 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNNSVNEYLSMFNKLARYAPEEVDTDKK 2044 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2045 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2134 Score = 53.8 bits (111), Expect(3) = 7e-28 Identities = 18/61 (29%), Positives = 37/61 (60%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 ++L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QLKG A+ WW Sbjct: 1649 SNLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLKGPAADWW 1828 Query: 688 Q 690 + Sbjct: 1829 E 1831 Score = 33.6 bits (67), Expect(3) = 7e-28 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2405 PSAVQCFRCNQMGHYARQC 2461 Score = 37.3 bits (75), Expect(2) = 0.001 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = -1 / -3 Query: 915 ELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTK 736 EL L L+ + L+ V QLV+ VL+ + ALL++ E L +N R++ +E +K Sbjct: 2059 ELPDLLLVCVHFLRGVPSQLVEHT*VLIDTVVALLKSVEFLFLHINGAFRHMSCTESRSK 1880 Query: 735 LVP 727 L+P Sbjct: 1879 LIP 1871 Score = 25.8 bits (50), Expect(2) = 0.001 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = -2 / -1 Query: 686 HQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNG 564 HQ A PF+W A S+G L S QSSAS G Sbjct: 1827 HQSAAGPFSW*EA*SVFSTGVHCTKLSFLSTSFSQSSASTG 1705
>LOC_Os11g39790:12011.t03521:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6125 Score = 90.0 bits (190), Expect(3) = 8e-28 Identities = 37/90 (41%), Positives = 57/90 (63%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG+NSV +Y +F++LARYA ++V K Sbjct: 2031 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNNSVNEYLSQFNKLARYAPEEVDTDKK 2210 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2211 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2300 Score = 51.9 bits (107), Expect(3) = 8e-28 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1815 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1994 Query: 688 Q 690 + Sbjct: 1995 E 1997 Score = 33.6 bits (67), Expect(3) = 8e-28 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +3 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2571 PSAVQCFRCNQMGHYARQC 2627 Score = 35.0 bits (70), Expect = 1.7 Identities = 18/51 (35%), Positives = 30/51 (58%) Frame = -1 / -1 Query: 879 LQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L+ V QLV+L VL+ + ALL++ E +N R++ +E +KL+P Sbjct: 2189 LRGVPSQLVELT*VLIDTVVALLKSVEFFFLHVNSAFRHMSCTESRSKLIP 2037
>LOC_Os08g26910:12008.t02455:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4209 Score = 80.8 bits (170), Expect(4) = 8e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 VTWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNCLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 52.8 bits (109), Expect(4) = 8e-28 Identities = 21/66 (31%), Positives = 35/66 (53%) Frame = +1 / +1 Query: 511 SLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQ 690 +L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 175 NLAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWD 354 Query: 691 QLKDSR 708 + +R Sbjct: 355 HFRLNR 372 Score = 34.1 bits (68), Expect(4) = 8e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 8e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os06g15530:12006.t01426:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 88.1 bits (186), Expect(3) = 9e-28 Identities = 38/111 (34%), Positives = 62/111 (55%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF +FR ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSEFRRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.5 bits (117), Expect(3) = 9e-28 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 26.3 bits (51), Expect(3) = 9e-28 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSVKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os12g28380:12012.t02548:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 86.8 bits (183), Expect(3) = 9e-28 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++WDEF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWDEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(3) = 9e-28 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 26.3 bits (51), Expect(3) = 9e-28 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSVKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os04g27490:12004.t02452:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6628 Score = 90.0 bits (190), Expect(3) = 9e-28 Identities = 37/90 (41%), Positives = 57/90 (63%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG+NSV +Y +F++LARYA ++V K Sbjct: 2758 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNNSVNEYLSQFNKLARYAPEEVDTDKK 2937 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2938 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 3027 Score = 51.9 bits (107), Expect(3) = 9e-28 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 2542 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNIVQCTPVEKTLYASHQLRGPAADWW 2721 Query: 688 Q 690 + Sbjct: 2722 E 2724 Score = 33.6 bits (67), Expect(3) = 9e-28 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 3298 PSAVQCFRCNQMGHYARQC 3354 Score = 37.7 bits (76), Expect = 0.26 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = -1 / -2 Query: 915 ELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTK 736 EL L L+ + L+ V QLV+L VL+ + ALL+ + L +N R++ +E +K Sbjct: 2952 ELPDLLLVCVHFLRGVPSQLVELT*VLIDTVVALLKPVKFLFLHINGAFRHMSCTESRSK 2773 Query: 735 LVP 727 L+P Sbjct: 2772 LIP 2764
>LOC_Os10g10600:12010.t00866:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 82.6 bits (174), Expect(4) = 9e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 51.0 bits (105), Expect(4) = 9e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTNQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 9e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 9e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os10g03250:12010.t00214:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 82.2 bits (173), Expect(4) = 9e-28 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNCMEQRKRR 711 Score = 51.5 bits (106), Expect(4) = 9e-28 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 9e-28 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 9e-28 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os08g09140:12008.t00800:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5481 Score = 82.2 bits (173), Expect(4) = 1e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 1447 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVCNDEE 1626 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 1627 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 1770 Score = 52.4 bits (108), Expect(4) = 1e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 1237 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 1416 Query: 694 LKDSR 708 + +R Sbjct: 1417 FRLNR 1431 Score = 34.1 bits (68), Expect(4) = 1e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 1987 VVCFNCGDPGHYADKCPKPRRV 2052 Score = 28.1 bits (55), Expect(4) = 1e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 2098 ARVNHVAAAEAQDAPDVIL 2154
>LOC_Os01g23160:12001.t02044:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2415 Score = 87.2 bits (184), Expect(2) = 1e-27 Identities = 39/111 (35%), Positives = 62/111 (55%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ V + +FR LKQG +V +Y EF+ LARYA +DV Sbjct: 1492 GHTITWNEFSSVFKRSHVPAGMVTLRKREFRYLKQGDLTVTEYLHEFYRLARYAPEDVET 1671 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 1672 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAVQLESEHNRMTNCKRR 1824 Score = 57.9 bits (120), Expect(2) = 1e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1291 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 1470 Query: 694 LKDSR 708 + SR Sbjct: 1471 YEASR 1485
>LOC_Os12g33450:12012.t03034:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6616 Score = 82.6 bits (174), Expect(4) = 1e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 2582 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 2761 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 2762 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 2905 Score = 52.4 bits (108), Expect(4) = 1e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2372 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 2551 Query: 694 LKDSR 708 + +R Sbjct: 2552 FRLNR 2566 Score = 34.1 bits (68), Expect(4) = 1e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3122 VVCFNCGDPGHYADKCPKPRRV 3187 Score = 28.1 bits (55), Expect(4) = 1e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 3233 ARVNHVAAAEAQDAPDVIL 3289
>LOC_Os06g36620:12006.t03357:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 83.5 bits (176), Expect(3) = 1e-27 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLGKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLENEHNRMTNCKRR 759 Score = 60.6 bits (126), Expect(3) = 1e-27 Identities = 26/65 (40%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL GQAS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGQASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 26.3 bits (51), Expect(3) = 1e-27 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSVKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os05g22810:12005.t01940:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 83.1 bits (175), Expect(4) = 1e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 52.4 bits (108), Expect(4) = 1e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 31.3 bits (62), Expect(4) = 1e-27 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHY +KC R+ Sbjct: 928 VVCFNCGDPGHYDDKCPKPRRV 993 Score = 28.6 bits (56), Expect(4) = 1e-27 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIMAV 1440 ARVN V AAEA+++ DVI+ + Sbjct: 1039 ARVNHVAAAEAQDAPDVILGM 1101
>LOC_Os01g45490:12001.t04004:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4428 Score = 82.6 bits (174), Expect(4) = 1e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 394 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 573 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 574 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 717 Score = 52.4 bits (108), Expect(4) = 1e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 184 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 363 Query: 694 LKDSR 708 + +R Sbjct: 364 FRLNR 378 Score = 34.1 bits (68), Expect(4) = 1e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 934 VVCFNCGDPGHYADKCPKPRRV 999 Score = 26.3 bits (51), Expect(4) = 1e-27 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AEA+++ DVI+ Sbjct: 1045 ARVNHVATAEAQDAPDVIL 1101
>LOC_Os10g06430:12010.t00512:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5748 Score = 78.0 bits (164), Expect(3) = 1e-27 Identities = 33/107 (30%), Positives = 61/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF F +++P++ + + +FRRL+QG+ +V +Y F +LARYA+ D+ +++ K Sbjct: 1693 TWEEFTAAFHENFVPAAVMRMKKNEFRRLQQGNTTVQEYLNRFTQLARYAIGDLANEEEK 1872 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N V +++KR Sbjct: 1873 IDKFIEGLNDELRGPMIGQDHESFRSLINKVVRLENDQRTVGHNRKR 2013 Score = 62.9 bits (131), Expect(3) = 1e-27 Identities = 25/67 (37%), Positives = 36/67 (53%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF D+P +AEDW+R + K VR D V F QL+G A WW Sbjct: 1471 SSFGEFMRTKPPTFAMADKPMEAEDWLRIIEKKLTLVRVREADKVIFVVNQLEGPAGDWW 1650 Query: 688 QQLKDSR 708 K++R Sbjct: 1651 DTYKEAR 1671 Score = 33.6 bits (67), Expect(3) = 1e-27 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 / +1 Query: 1249 DVTCHKCGQKGHYANKC 1299 +V C CG+ GHYAN C Sbjct: 2197 NVDCFNCGEYGHYANNC 2247 Score = 32.7 bits (65), Expect = 8.4 Identities = 20/71 (28%), Positives = 35/71 (49%) Frame = -1 / -1 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q+++Q ELV L I + + GQL + + +HR LLQ +L+ + R+ Sbjct: 1908 QLIIQPFYELVDLFFFICEVSNCIAGQLSESV*IFLHRCVPLLQPSKLVLLHTHYRSRHE 1729 Query: 759 VGSEVTTKLVP 727 V + ++L P Sbjct: 1728 VLMKCCSELFP 1696
>LOC_Os04g18600:12004.t01602:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5492 Score = 81.7 bits (172), Expect(4) = 1e-27 Identities = 38/108 (35%), Positives = 59/108 (54%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QG+ SV +Y EF+ LARYA +DV + + Sbjct: 1458 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGTRSVTEYLHEFNRLARYAPEDVRNDEE 1637 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 1638 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 1781 Score = 52.4 bits (108), Expect(4) = 1e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 1248 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 1427 Query: 694 LKDSR 708 + +R Sbjct: 1428 FRLNR 1442 Score = 34.1 bits (68), Expect(4) = 1e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +3 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 1998 VVCFNCGDPGHYADKCPKPRRV 2063 Score = 28.1 bits (55), Expect(4) = 1e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 2109 ARVNHVAAAEAQDAPDVIL 2165
>LOC_Os05g19890:12005.t01752:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1281 Score = 86.8 bits (183), Expect(2) = 1e-27 Identities = 38/111 (34%), Positives = 62/111 (55%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LARYA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLARYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 1e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os01g68410:12001.t06197:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5946 Score = 86.3 bits (182), Expect(3) = 1e-27 Identities = 35/90 (38%), Positives = 57/90 (63%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG+++V +Y +F++LARYA ++V K Sbjct: 1852 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSNVNEYLSQFNKLARYAPEEVDTDKK 2031 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2032 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2121 Score = 54.7 bits (113), Expect(3) = 1e-27 Identities = 18/61 (29%), Positives = 37/61 (60%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ F P + +A+ QL+G A+ WW Sbjct: 1636 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKFNLVQCTPVEKTLYASHQLRGPAADWW 1815 Query: 688 Q 690 + Sbjct: 1816 E 1818 Score = 33.6 bits (67), Expect(3) = 1e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2392 PSAVQCFRCNQMGHYARQC 2448 Score = 35.4 bits (71), Expect = 1.2 Identities = 22/63 (34%), Positives = 35/63 (55%) Frame = -1 / -1 Query: 915 ELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTK 736 EL L L+ + L+ + QLV+L VL+ ALL++ E L +N R + +E +K Sbjct: 2046 ELPDLLLVCVHFLRGIPSQLVELT*VLIDIAVALLKSVEFLFLHVNGAFRYMSCTESCSK 1867 Query: 735 LVP 727 L+P Sbjct: 1866 LIP 1858
>LOC_Os03g26760:12003.t02358:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9720 Score = 82.6 bits (174), Expect(4) = 1e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 5686 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 5865 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 5866 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAVRQEDKYNRMEQKKRR 6009 Score = 54.2 bits (112), Expect(4) = 1e-27 Identities = 22/65 (33%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + +D V FA+ QL G AS WW Sbjct: 5476 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQDKVSFASHQLHGPASEWWDH 5655 Query: 694 LKDSR 708 + +R Sbjct: 5656 FRLNR 5670 Score = 34.1 bits (68), Expect(4) = 1e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 6226 VVCFNCGDPGHYADKCPKPRRV 6291 Score = 27.6 bits (54), Expect(4) = 1e-27 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+ + DVI+ Sbjct: 6337 ARVNHVAAAEAQGAPDVIL 6393
>LOC_Os05g19650:12005.t01731:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7939 Score = 82.6 bits (174), Expect(4) = 2e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 3905 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 4084 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 4085 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 4228 Score = 52.4 bits (108), Expect(4) = 2e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 3695 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 3874 Query: 694 LKDSR 708 + +R Sbjct: 3875 FRLNR 3889 Score = 34.5 bits (69), Expect(4) = 2e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 4445 VVCFNCGDSGHYADKCPKPRRV 4510 Score = 28.1 bits (55), Expect(4) = 2e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 4556 ARVNHVAAAEAQDAPDVIL 4612
>LOC_Os07g24250:12007.t02122:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1754 Score = 87.7 bits (185), Expect(3) = 2e-27 Identities = 39/111 (35%), Positives = 61/111 (54%) Frame = +1 / +3 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V KY EF+ LA YA +DV Sbjct: 831 GHTITWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTKYLHEFYRLAHYAPEDVET 1010 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 1011 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 1163 Score = 56.5 bits (117), Expect(3) = 2e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 630 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATPQLVGPASEWWDS 809 Query: 694 LKDSR 708 + SR Sbjct: 810 YEASR 824 Score = 26.7 bits (52), Expect(3) = 2e-27 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +3 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1551 PQMDSSTKKTLICYNCKEPGHFSRDCPQPKR 1643
>LOC_Os11g21830:12011.t01853:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5463 Score = 81.3 bits (171), Expect(3) = 2e-27 Identities = 35/107 (32%), Positives = 61/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FR L+QG+ +V +Y F LARYA+ D+ D++ K Sbjct: 1696 TWEEFTAAFRENFVPAAVMRMKKNEFRGLRQGNTTVQEYLNRFT*LARYAIGDLADEEEK 1875 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D E F N VE+++KR Sbjct: 1876 IDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKR 2016 Score = 60.6 bits (126), Expect(3) = 2e-27 Identities = 24/67 (35%), Positives = 36/67 (53%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + D+P +AEDW+ + K VR D V F QL+G A WW Sbjct: 1474 SSFGEFMRTKPPTFATADEPMEAEDWLCIIEKKLTLVQVREADKVIFTVNQLEGPAGDWW 1653 Query: 688 QQLKDSR 708 K++R Sbjct: 1654 DTYKEAR 1674 Score = 32.2 bits (64), Expect(3) = 2e-27 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +1 / +1 Query: 1249 DVTCHKCGQKGHYANKC 1299 ++ C CG+ GHYAN C Sbjct: 2200 NMDCFNCGEYGHYANNC 2250 Score = 37.3 bits (75), Expect(2) = 2e-05 Identities = 19/49 (38%), Positives = 29/49 (59%) Frame = -1 / -1 Query: 690 LPPNRSLPLQLECCKLDIILWTHIATLEMLVHITDPIFRVKRLVARSER 544 +PP S LQL C+ + + ++ + L++ T PIFR+ RLV SER Sbjct: 1656 IPPITSGSLQLVYCEDHFVGFAYLDKGQFLLYDT*PIFRLHRLVCCSER 1510 Score = 31.8 bits (63), Expect(2) = 2e-05 Identities = 21/84 (25%), Positives = 41/84 (48%) Frame = -1 / -1 Query: 978 VKLLRIVQSEC*LQILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPE 799 ++ L I+ + Q+++Q ELV L I + + GQL + + +HR L Q + Sbjct: 1950 LETLMILPNHRSTQLIIQPFYELVDLFFFICEVSNCIAGQLSESVQIFLHRCVPLSQPSK 1771 Query: 798 LLTHLLNKTGRNVVGSEVTTKLVP 727 L+ + R+ V ++ ++L P Sbjct: 1770 LVLLHTHYRSRHEVLAKCCSELFP 1699
>LOC_Os05g18340:12005.t01601:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5910 Score = 77.6 bits (163), Expect(4) = 2e-27 Identities = 37/111 (33%), Positives = 57/111 (51%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W EF F+ +IPS V + +FR L QGS SV +Y +F+ LARYA +DV Sbjct: 400 GEPITWQEFTAAFKKTHIPSGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRT 579 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GL ++L AL D +F + + +E K+R Sbjct: 580 DEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRR 732 Score = 52.8 bits (109), Expect(4) = 2e-27 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G A+ WW Sbjct: 199 LADFLHVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 378 Query: 694 LKDSR 708 + R Sbjct: 379 FRQGR 393 Score = 35.9 bits (72), Expect(4) = 2e-27 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 VTC CG GHYA+KC R+ Sbjct: 964 VTCFNCGDLGHYADKCPKPRRV 1029 Score = 29.9 bits (59), Expect(4) = 2e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+N+ DV++ Sbjct: 1075 ARVNHVAAAEAQNAPDVVL 1131
>LOC_Os11g03250:12011.t00216:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4040 Score = 81.7 bits (172), Expect(3) = 2e-27 Identities = 34/107 (31%), Positives = 62/107 (57%) Frame = +1 / +1 Query: 724 SWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKSK 903 +W+EF FR +++P++ + + +FRRL+QG+ +V +Y F +LARYA +D+ D++ Sbjct: 358 NWEEFTTAFRDNFVPAAVMLMKKNEFRRLRQGNTTVQEYLNRFTQLARYATRDLADEEET 537 Query: 904 IYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 I +F GL ++L+ + D + F N VE+++KR Sbjct: 538 IDKFIEGLNDELRGPMIGQDHDSFQSLINKVVRLENDRKIVEHNRKR 678 Score = 58.3 bits (121), Expect(3) = 2e-27 Identities = 25/67 (37%), Positives = 36/67 (53%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 +S +F+ + TF + ++P DAEDW+R + K VR D V FA QL+G A W Sbjct: 136 SSFGEFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDSW 315 Query: 688 QQLKDSR 708 K +R Sbjct: 316 DTYKGAR 336 Score = 33.1 bits (66), Expect(3) = 2e-27 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +1 Query: 1201 QHQKQGPPQIQFRQPADVTCHKCGQKGHYANKC 1299 Q++ P Q +C CG+ GH+ANKC Sbjct: 814 QNRAPAPNQAATGPVRPGSCFNCGEYGHFANKC 912 Score = 33.1 bits (66), Expect = 6.1 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = -2 / -1 Query: 686 HQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNGWSQEVNV 543 H+ A P NW A +T S+ RT + QSSAS G S NV Sbjct: 314 HESPAGPSNWFAAKITLSASRTRTRVSFFSMILNQSSASIGSSAVANV 171
>LOC_Os05g19810:12005.t01745:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.9 bits (179), Expect(3) = 2e-27 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFRRSHVPAGTITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 58.3 bits (121), Expect(3) = 2e-27 Identities = 25/65 (38%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW + Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDR 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 26.7 bits (52), Expect(3) = 2e-27 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSAKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os08g24970:12008.t02267:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3563 Score = 86.3 bits (182), Expect(2) = 2e-27 Identities = 38/111 (34%), Positives = 62/111 (55%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LARYA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLARYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELVVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 2e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os07g24620:12007.t02159:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2865 Score = 86.3 bits (182), Expect(2) = 2e-27 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 1939 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 2118 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K QF GLK++L + L L D E+F+K + + N K+R Sbjct: 2119 DEDKQEQFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 2271 Score = 57.9 bits (120), Expect(2) = 2e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1738 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 1917 Query: 694 LKDSR 708 + SR Sbjct: 1918 YEASR 1932
>LOC_Os06g03280:12006.t00221:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2811 Score = 88.1 bits (186), Expect(2) = 2e-27 Identities = 39/111 (35%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR Y+P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 1888 GHTITWNEFSSVFRRSYVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 2067 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 2068 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 2220 Score = 56.1 bits (116), Expect(2) = 2e-27 Identities = 24/65 (36%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1687 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDN 1866 Query: 694 LKDSR 708 + S+ Sbjct: 1867 YEASQ 1881
>LOC_Os10g10660:12010.t00872:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2808 Score = 88.1 bits (186), Expect(2) = 2e-27 Identities = 39/111 (35%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR Y+P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 1885 GHTITWNEFSSVFRRSYVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 2064 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 2065 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 2217 Score = 56.1 bits (116), Expect(2) = 2e-27 Identities = 24/65 (36%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1684 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDN 1863 Query: 694 LKDSR 708 + S+ Sbjct: 1864 YEASQ 1878
>LOC_Os05g17500:12005.t01519:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1281 Score = 86.3 bits (182), Expect(2) = 2e-27 Identities = 38/111 (34%), Positives = 62/111 (55%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LARYA +DV Sbjct: 427 GHTITWNEFSSVFKRPHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLARYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 2e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os08g06990:12008.t00588:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7745 Score = 82.6 bits (174), Expect(4) = 2e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 5106 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 5285 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 5286 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 5429 Score = 52.4 bits (108), Expect(4) = 2e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 4896 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 5075 Query: 694 LKDSR 708 + +R Sbjct: 5076 FRLNR 5090 Score = 34.1 bits (68), Expect(4) = 2e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +3 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 5646 VVCFNCGDPGHYADKCPKPRRV 5711 Score = 28.1 bits (55), Expect(4) = 2e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 5757 ARVNHVAAAEAQDAPDVIL 5813
>LOC_Os05g40930:12005.t03632:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1468 Score = 85.8 bits (181), Expect(3) = 2e-27 Identities = 37/109 (33%), Positives = 61/109 (55%) Frame = +1 / +1 Query: 718 VMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQK 897 +++W EF FR +IP++ + + +FRRL+QG +V +Y +F +LA+YA D+ D+K Sbjct: 352 IITWMEFTTAFRDAFIPTAVIRMKKNEFRRLRQGFMTVQEYLNKFTQLAQYAASDIQDEK 531 Query: 898 SKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 KI +F GL+++L+ + D E F N VE +KR Sbjct: 532 EKIERFIEGLRDELRGPMISQDHENFQSLVNKVVRLENDRRMVEGLRKR 678 Score = 56.5 bits (117), Expect(3) = 2e-27 Identities = 21/63 (33%), Positives = 36/63 (57%) Frame = +1 / +1 Query: 517 SQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQL 696 ++F+ + F+ ++P DAEDW+R + K ++ V FAT QL+G A+ WW+ Sbjct: 145 AEFMRIKPPVFSKSEEPMDAEDWLRAIEKKLTLVRTSEQEKVTFATHQLEGPANEWWEAY 324 Query: 697 KDS 705 + S Sbjct: 325 QAS 333 Score = 27.6 bits (54), Expect(3) = 2e-27 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +1 / +1 Query: 1249 DVTCHKCGQKGHYANKCTSQ 1308 D C+ CG+ GH+A C ++ Sbjct: 814 DSPCYVCGKIGHFARLCPNR 873
>LOC_Os06g21059:12006.t01923:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8730 Score = 83.1 bits (175), Expect(4) = 2e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 52.4 bits (108), Expect(4) = 2e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 2e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 2e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os06g18800:12006.t01703:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7871 Score = 82.6 bits (174), Expect(4) = 2e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 3837 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 4016 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 4017 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 4160 Score = 52.4 bits (108), Expect(4) = 2e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 3627 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 3806 Query: 694 LKDSR 708 + +R Sbjct: 3807 FRLNR 3821 Score = 34.1 bits (68), Expect(4) = 2e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +3 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 4377 VVCFNCGDPGHYADKCPKPRRV 4442 Score = 28.1 bits (55), Expect(4) = 2e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 4488 ARVNHVAAAEAQDAPDVIL 4544
>LOC_Os04g38150:12004.t03386:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.9 bits (179), Expect(3) = 2e-27 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ V + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMVTLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(3) = 2e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 26.7 bits (52), Expect(3) = 2e-27 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSAKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os03g33340:12003.t02927:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4116 Score = 85.8 bits (181), Expect(2) = 2e-27 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +1 / +2 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 1964 GHTITWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 2143 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 2144 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 2296 Score = 57.9 bits (120), Expect(2) = 2e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1763 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWNS 1942 Query: 694 LKDSR 708 + SR Sbjct: 1943 YEASR 1957
>LOC_Os04g04860:12004.t00370:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2822 Score = 85.8 bits (181), Expect(2) = 2e-27 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +1 / +3 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 1899 GHTITWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 2078 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 2079 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 2231 Score = 57.9 bits (120), Expect(2) = 2e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1698 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 1877 Query: 694 LKDSR 708 + SR Sbjct: 1878 YEASR 1892
>LOC_Os04g07480:12004.t00622:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 85.8 bits (181), Expect(2) = 2e-27 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 2e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os12g19700:12012.t01813:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 10595 Score = 83.1 bits (175), Expect(4) = 3e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 6561 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 6740 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 6741 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 6884 Score = 52.8 bits (109), Expect(4) = 3e-27 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G A+ WW Sbjct: 199 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 378 Query: 694 LKDSR 708 + R Sbjct: 379 FRQGR 393 Score = 34.1 bits (68), Expect(4) = 3e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +3 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 7101 VVCFNCGDPGHYADKCPKPRRV 7166 Score = 28.1 bits (55), Expect(4) = 3e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 7212 ARVNHVAAAEAQDAPDVIL 7268 Score = 75.8 bits (159), Expect(3) = 2e-16 Identities = 36/111 (32%), Positives = 57/111 (51%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G +++W EF F+ +IPS V + +FR L QGS SV +Y + + LARYA +DV Sbjct: 400 GELITWQEFTTAFKKTHIPSGVVALKKREFRALNQGSRSVTEYLHDVNRLARYAPEDVRT 579 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GL ++L AL D +F + + +E K+R Sbjct: 580 DEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRR 732 Score = 32.7 bits (65), Expect(3) = 2e-16 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKC 1299 V C CG GHYA+KC Sbjct: 964 VICFNCGDPGHYADKC 1011 Score = 29.9 bits (59), Expect(3) = 2e-16 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+N+ DV++ Sbjct: 1075 ARVNHVAAAEAQNAPDVVL 1131 Score = 52.4 bits (108), Expect = 1e-05 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 6351 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 6530 Query: 694 LKDSR 708 + +R Sbjct: 6531 FRLNR 6545
>LOC_Os05g20129:12005.t01775:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9633 Score = 83.1 bits (175), Expect(4) = 3e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 5599 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 5778 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 5779 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 5922 Score = 52.4 bits (108), Expect(4) = 3e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 5389 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 5568 Query: 694 LKDSR 708 + +R Sbjct: 5569 FRLNR 5583 Score = 34.1 bits (68), Expect(4) = 3e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 6139 VVCFNCGDPGHYADKCPKPRRV 6204 Score = 28.1 bits (55), Expect(4) = 3e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 6250 ARVNHVAAAEAQDAPDVIL 6306
>LOC_Os06g32010:12006.t02899:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5798 Score = 80.8 bits (170), Expect(4) = 3e-27 Identities = 39/108 (36%), Positives = 58/108 (53%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 2763 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVMEYLHEFNRLARYAPEDVRNDEE 2942 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 +F GGL ++L L + D +F K + +E K+R Sbjct: 2943 CQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 3086 Score = 52.4 bits (108), Expect(4) = 3e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2553 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 2732 Query: 694 LKDSR 708 + +R Sbjct: 2733 FRLNR 2747 Score = 34.1 bits (68), Expect(4) = 3e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +3 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3303 VVCFNCGDPGHYADKCPKPRRV 3368 Score = 28.1 bits (55), Expect(4) = 3e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 3414 ARVNHVAAAEAQDAPDVIL 3470
>LOC_Os04g04160:12004.t00304:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9031 Score = 82.6 bits (174), Expect(4) = 3e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 4997 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 5176 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 5177 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 5320 Score = 52.4 bits (108), Expect(4) = 3e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 4787 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 4966 Query: 694 LKDSR 708 + +R Sbjct: 4967 FRLNR 4981 Score = 34.1 bits (68), Expect(4) = 3e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 5537 VVCFNCGDPGHYADKCPKPRRV 5602 Score = 28.1 bits (55), Expect(4) = 3e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 5648 ARVNHVAAAEAQDAPDVIL 5704
>LOC_Os08g03010:12008.t00195:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6634 Score = 82.6 bits (174), Expect(4) = 3e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 2600 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 2779 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 2780 RQEKFLGGLNDELSYPLMVGDYSDFQKLVDKAIRQEDKYNCMEQRKRR 2923 Score = 49.6 bits (102), Expect(4) = 3e-27 Identities = 21/65 (32%), Positives = 32/65 (49%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F S P +A DW+ + K + + V FA+ QL G AS WW Sbjct: 2390 LAEFLRVRPPVFFSTTNPIEAGDWLHAIEKKLDLLQCTDPEKVSFASHQLHGSASEWWDH 2569 Query: 694 LKDSR 708 + +R Sbjct: 2570 FRLNR 2584 Score = 34.1 bits (68), Expect(4) = 3e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3140 VVCFNCGDPGHYADKCPKPRRV 3205 Score = 29.5 bits (58), Expect(4) = 3e-27 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA++S DVI+ Sbjct: 3251 ARVNHVAAAEAQDSPDVIL 3307
>LOC_Os05g35390:12005.t03132:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5576 Score = 87.7 bits (185), Expect(3) = 3e-27 Identities = 36/90 (40%), Positives = 57/90 (63%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y +F++LARYA ++V K Sbjct: 1469 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSQFNKLARYAPEEVDTDKK 1648 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 1649 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 1738 Score = 51.9 bits (107), Expect(3) = 3e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1253 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1432 Query: 688 Q 690 + Sbjct: 1433 E 1435 Score = 33.6 bits (67), Expect(3) = 3e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2009 PSAVQCFRCNQMGHYARQC 2065 Score = 32.7 bits (65), Expect = 8.4 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = -1 / -2 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ L+ V QLV+L VL+ ALL++ E +N R++ +E ++L+P Sbjct: 1651 LLLICVYFLRGVPSQLVELT*VLIDTAVALLKSVEFFFLHVNSAFRHMSCTESRSELIP 1475
>LOC_Os12g33910:12012.t03080:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 10289 Score = 83.1 bits (175), Expect(4) = 3e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 52.4 bits (108), Expect(4) = 3e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 3e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 3e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os04g05970:12004.t00478:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 79.9 bits (168), Expect(4) = 3e-27 Identities = 38/108 (35%), Positives = 58/108 (53%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF F +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFPKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFYRLARYASEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 568 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNCMEQRKRR 711 Score = 51.9 bits (107), Expect(4) = 3e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGSASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 3e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 3e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os07g35440:12007.t03219:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4842 Score = 88.1 bits (186), Expect(2) = 3e-27 Identities = 39/111 (35%), Positives = 62/111 (55%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LARYA +DV Sbjct: 1684 GHTITWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLARYAPEDVET 1863 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 1864 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 2016 Score = 55.1 bits (114), Expect(2) = 3e-27 Identities = 24/65 (36%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + F P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1483 LSEFLKTEPPIFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 1662 Query: 694 LKDSR 708 + SR Sbjct: 1663 YEASR 1677
>LOC_Os07g43790:12007.t04023:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4702 Score = 88.6 bits (187), Expect(2) = 3e-27 Identities = 37/90 (41%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RL QG+NSV +Y EF++LARYA ++V K Sbjct: 1846 IAWDEFTTAFRAAHVPESTIDMKKEEFNRLNQGNNSVNEYLSEFNKLARYAPEEVDTDKK 2025 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2026 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2115 Score = 54.7 bits (113), Expect(2) = 3e-27 Identities = 18/61 (29%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++L F+ +P +A+DW++D+ + P + +A+ QL+G A+ WW Sbjct: 1630 SKLTDFLRSRLLEFSQTVEPVEADDWLKDVERKLNLVQCTPVEKTLYASHQLRGPAADWW 1809 Query: 688 Q 690 + Sbjct: 1810 E 1812
>LOC_Os04g23080:12004.t02036:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2461 Score = 84.5 bits (178), Expect(2) = 3e-27 Identities = 37/112 (33%), Positives = 63/112 (56%) Frame = +1 / +2 Query: 709 GGRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVP 888 GG+ ++W+EF + F +IP+ V + +FR LKQ ++V +Y EF+ LARYA +DV Sbjct: 1916 GGQPITWEEFTKGFNKTHIPAGVVALKKREFRPLKQKDHTVAEYLHEFNRLARYAPEDVR 2095 Query: 889 DQKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GLK++L + L HD +F + + ++N K+R Sbjct: 2096 TDEERQEKFLEGLKDELSVTLISHDYVDFQQLVDKAIRLEDKKNRMDNRKRR 2251 Score = 58.8 bits (122), Expect(2) = 3e-27 Identities = 24/67 (35%), Positives = 36/67 (53%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K E ++ V FA+ QL+G AS WW Sbjct: 1718 LADFLRVRPPTFSSTTNPVEAGDWLHTIEKRLELLQCTDQEKVVFASHQLQGSASEWWDH 1897 Query: 694 LKDSRGG 714 + +R G Sbjct: 1898 FRMNRAG 1918 Score = 44.1 bits (90), Expect = 0.003 Identities = 26/71 (36%), Positives = 37/71 (52%) Frame = -1 / -1 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNV 760 Q +LQA EL+ L+ +I +TGQ ++L +L H + LLQ PEL N + R + Sbjct: 2146 QFILQAFQELLLPFLVSTHIFWSITGQTIELMKILCHGMILLLQWPELTLLQSNNSCRYM 1967 Query: 759 VGSEVTTKLVP 727 E KL P Sbjct: 1966 CLIESFCKLFP 1934
>LOC_Os04g12320:12004.t01056:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6193 Score = 79.0 bits (166), Expect(4) = 3e-27 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 2756 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 2935 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 2936 RQEKFLEGLNDELSYPLMTRDYPDFQKLVDKAIRQEDKYNRMEQKKRR 3079 Score = 54.2 bits (112), Expect(4) = 3e-27 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + TF+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2546 LAEFLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEMVSFASHQLHGPASEWWDH 2725 Query: 694 LKDSR 708 + +R Sbjct: 2726 FRLNR 2740 Score = 34.1 bits (68), Expect(4) = 3e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3296 VVCFNCGDPGHYADKCPKPRRV 3361 Score = 28.1 bits (55), Expect(4) = 3e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 3407 ARVNHVAAAEAQDAPDVIL 3463
>LOC_Os11g34510:12011.t03004:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1152 Score = 85.4 bits (180), Expect(2) = 3e-27 Identities = 38/111 (34%), Positives = 60/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++WDEF F+ ++P + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWDEFSSVFKRSHVPVGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 3e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os07g30320:12007.t02721:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 5958 Score = 87.7 bits (185), Expect(3) = 4e-27 Identities = 36/90 (40%), Positives = 57/90 (63%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y +F++LARYA ++V K Sbjct: 1864 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSQFNKLARYAPEEVDTDKK 2043 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2044 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2133 Score = 51.9 bits (107), Expect(3) = 4e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1648 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1827 Query: 688 Q 690 + Sbjct: 1828 E 1830 Score = 33.6 bits (67), Expect(3) = 4e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2404 PSAVQCFRCNQMGHYARQC 2460 Score = 34.5 bits (69), Expect = 2.4 Identities = 20/59 (33%), Positives = 32/59 (54%) Frame = -1 / -1 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ L+ V QLV+L VL+ ALL++ E +N R++ +E +KL+P Sbjct: 2046 LLLICVYFLRGVPSQLVELT*VLIDTAVALLKSVEFFFLHVNSAFRHMSCTESRSKLIP 1870
>LOC_Os01g73320:12001.t06614:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5959 Score = 87.2 bits (184), Expect(3) = 4e-27 Identities = 35/90 (38%), Positives = 57/90 (63%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++S+ +Y +F++LARYA ++V K Sbjct: 1865 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSINEYLSQFNKLARYAPEEVDTDKK 2044 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2045 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2134 Score = 52.4 bits (108), Expect(3) = 4e-27 Identities = 17/61 (27%), Positives = 37/61 (60%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + + +A+ QL+G A+ WW Sbjct: 1649 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKMLYASHQLRGPAADWW 1828 Query: 688 Q 690 + Sbjct: 1829 E 1831 Score = 33.6 bits (67), Expect(3) = 4e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2405 PSAVQCFRCNQMGHYARQC 2461 Score = 33.1 bits (66), Expect = 6.1 Identities = 18/59 (30%), Positives = 33/59 (55%) Frame = -1 / -1 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ + L+ + QLV+L VL+ ALL++ E +N R++ +E ++L+P Sbjct: 2047 LLLVCVHFLRGIPSQLVELT*VLIDTAVALLKSVEFFFLHVNSAFRHMSCTESRSELIP 1871
>LOC_Os12g15850:12012.t01439:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2537 Score = 83.5 bits (176), Expect(3) = 4e-27 Identities = 35/111 (31%), Positives = 62/111 (55%) Frame = +1 / +3 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++WDEF F+ ++P+ + + +FR LKQ +V +Y EFH LA YA +DV + Sbjct: 1614 GHTITWDEFSSVFKRSHVPAGMITLRKREFRYLKQEDLTVTEYLHEFHRLAHYAPEDVEN 1793 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K ++ GLK+++ + L L + E+F+K + ++N K+R Sbjct: 1794 DEDKQEKYLQGLKDEIAVQLLLEEYEDFEKLVDKAIQLESEHNRMKNCKRR 1946 Score = 58.8 bits (122), Expect(3) = 4e-27 Identities = 25/65 (38%), Positives = 34/65 (52%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF +P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1413 LSEFLKTETPTFAIVVEPMEASDWLRTVEKKLGLIQCTDQERVVFATHQLVGLASEWWDS 1592 Query: 694 LKDSR 708 + SR Sbjct: 1593 YEASR 1607 Score = 28.1 bits (55), Expect(3) = 4e-27 Identities = 8/26 (30%), Positives = 13/26 (50%) Frame = +1 / +3 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKC 1299 PQ+ + C+ C + GHY+ C Sbjct: 2334 PQMDSSAKKTLICYNCKEPGHYSRDC 2411
>LOC_Os06g40260:12006.t03722:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 80.3 bits (169), Expect(4) = 4e-27 Identities = 38/108 (35%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L +L + D +F K + +E K+R Sbjct: 568 RQEKFLEGLNDELSYSLMIGDYPDFQKLVDKAIRQENKYNCMEQKKRR 711 Score = 52.8 bits (109), Expect(4) = 4e-27 Identities = 22/65 (33%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LTDFLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 32.2 bits (64), Expect(4) = 4e-27 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +1 / +1 Query: 1258 CHKCGQKGHYANKCTSQLRL 1317 C CG GHYA+KC R+ Sbjct: 934 CFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 4e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os03g36290:12003.t03100:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5204 Score = 83.5 bits (176), Expect(2) = 5e-27 Identities = 37/109 (33%), Positives = 61/109 (55%) Frame = +1 / +3 Query: 718 VMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQK 897 +++W EF FR+ +IP++ + + +F R +QG SV++Y +F +LARYA D+ D+K Sbjct: 1698 IITWAEFTIAFRNTFIPTAVIRMKKNEF*RRRQGFMSVHEYLNKFTQLARYAASDIQDEK 1877 Query: 898 SKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 KI +F GL+++L+ + D E F N VE +KR Sbjct: 1878 EKIERFIEGLRDELRGQMISQDHESFQSLVNKVVKLENDHRMVEGLRKR 2024 Score = 59.3 bits (123), Expect(2) = 5e-27 Identities = 22/58 (37%), Positives = 34/58 (58%) Frame = +1 / +3 Query: 517 SQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQ 690 S+F+ + F+ ++P DAEDW+R + K ++ V FAT QLKG A+ WW+ Sbjct: 1491 SEFMRVKPPIFSKTEEPMDAEDWLRAIEKKLALVRTNEQEKVTFATHQLKGPANEWWE 1664
>LOC_Os02g16360:12002.t01429:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3900 Score = 83.5 bits (176), Expect(2) = 5e-27 Identities = 35/111 (31%), Positives = 62/111 (55%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++WDEF F+ ++P+ + + +FR LKQ +V +Y EFH LA YA +DV + Sbjct: 2977 GHTITWDEFSSVFKRSHVPAGMITLRKREFRYLKQEDLTVTEYLHEFHRLAHYAPEDVEN 3156 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K ++ GLK+++ + L L + E+F+K + ++N K+R Sbjct: 3157 DEDKQEKYLQGLKDEITVQLLLEEYEDFEKLVDKAIQLESEHNRMKNCKRR 3309 Score = 59.3 bits (123), Expect(2) = 5e-27 Identities = 25/65 (38%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF +P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 2776 LSEFLKTETPTFAIAVEPMEASDWLRTVEKKLGLIQCTDQERVVFATHQLVGLASEWWDS 2955 Query: 694 LKDSR 708 + SR Sbjct: 2956 YEASR 2970
>LOC_Os05g20690:12005.t01830:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1218 Score = 87.2 bits (184), Expect(2) = 5e-27 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++WDEF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 295 GHTITWDEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVIEYLHEFYRLAHYAPEDVET 474 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 475 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 627 Score = 55.6 bits (115), Expect(2) = 5e-27 Identities = 24/65 (36%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+ + K ++ V FAT QL G AS WW Sbjct: 94 LSEFLKTEPPTFAIAVNPMEASDWLHTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 273 Query: 694 LKDSR 708 + SR Sbjct: 274 YEASR 288
>LOC_Os08g06310:12008.t00521:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5950 Score = 87.2 bits (184), Expect(3) = 5e-27 Identities = 35/90 (38%), Positives = 57/90 (63%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y +F++LARYA +++ K Sbjct: 1856 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSQFNKLARYAPEEIDTDKK 2035 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2036 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2125 Score = 51.9 bits (107), Expect(3) = 5e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1640 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1819 Query: 688 Q 690 + Sbjct: 1820 E 1822 Score = 33.6 bits (67), Expect(3) = 5e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2396 PSAVQCFRCNQMGHYARQC 2452 Score = 34.1 bits (68), Expect = 3.2 Identities = 20/59 (33%), Positives = 32/59 (54%) Frame = -1 / -1 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ L+ V QLV+L VL+ ALL++ E +N R++ +E +KL+P Sbjct: 2038 LLLICVYFLRGVPSQLVELT*VLIDTAIALLKSVEFFFLHVNSAFRHMSCTESRSKLIP 1862
>LOC_Os12g17510:12012.t01603:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5959 Score = 87.2 bits (184), Expect(3) = 5e-27 Identities = 35/90 (38%), Positives = 57/90 (63%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++S+ +Y +F++LARYA ++V K Sbjct: 1865 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSINEYLSQFNKLARYAPEEVDTDKK 2044 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2045 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2134 Score = 51.9 bits (107), Expect(3) = 5e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1649 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1828 Query: 688 Q 690 + Sbjct: 1829 E 1831 Score = 33.6 bits (67), Expect(3) = 5e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2405 PSAVQCFRCNQMGHYARQC 2461 Score = 33.6 bits (67), Expect = 4.4 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = -1 / -1 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ + L+ V QLV+L VL+ ALL++ E +N R++ +E ++L+P Sbjct: 2047 LLLVCVHFLRGVPSQLVELT*VLIDTAVALLKSVEFFFLHVNSAFRHMSCTESRSELIP 1871
>LOC_Os04g59250:12004.t05383:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5959 Score = 87.2 bits (184), Expect(3) = 5e-27 Identities = 36/90 (40%), Positives = 57/90 (63%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y +F++LARYA ++V K Sbjct: 1865 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSQFNKLARYAPEEVDTDKK 2044 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2045 KIRKFLKGIAVGMRLQLLAHDFPTFHHMIN 2134 Score = 51.9 bits (107), Expect(3) = 5e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1649 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1828 Query: 688 Q 690 + Sbjct: 1829 E 1831 Score = 33.6 bits (67), Expect(3) = 5e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2405 PSAVQCFRCNQMGHYARQC 2461
>LOC_Os05g17630:12005.t01532:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7011 Score = 79.0 bits (166), Expect(4) = 5e-27 Identities = 38/111 (34%), Positives = 57/111 (51%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W EF FR +IPS V + +FR L QGS SV +Y +F+ LARYA +DV Sbjct: 2953 GEPITWQEFTAAFRKTHIPSGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRT 3132 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GL ++L AL D +F + + +E K+R Sbjct: 3133 DEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRR 3285 Score = 52.8 bits (109), Expect(4) = 5e-27 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G A+ WW Sbjct: 2752 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 2931 Query: 694 LKDSR 708 + R Sbjct: 2932 FRQGR 2946 Score = 33.6 bits (67), Expect(4) = 5e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3517 VICFNCGDPGHYADKCPKPRRV 3582 Score = 29.9 bits (59), Expect(4) = 5e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+N+ DV++ Sbjct: 3628 ARVNHVAAAEAQNAPDVVL 3684
>LOC_Os05g19900:12005.t01753:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 10795 Score = 82.6 bits (174), Expect(4) = 5e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 6761 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 6940 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 6941 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 7084 Score = 52.4 bits (108), Expect(4) = 5e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 6551 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 6730 Query: 694 LKDSR 708 + +R Sbjct: 6731 FRLNR 6745 Score = 33.6 bits (67), Expect(4) = 5e-27 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA KC R+ Sbjct: 7301 VVCFNCGDPGHYAGKCPKPRRV 7366 Score = 28.6 bits (56), Expect(4) = 5e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 7412 ARVNYVAAAEAQDAPDVIL 7468
>LOC_Os12g19620:12012.t01805:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1788 Score = 75.8 bits (159), Expect(4) = 5e-27 Identities = 37/108 (34%), Positives = 55/108 (50%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF R +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + Sbjct: 394 ITWLEFTAALRKTHIPSGVVSPKKKEFRTLTQGSRSVTEYLHEFNRLARYAPEDVRTDEE 573 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 574 RQEKFLEGLNDELSYPLMTGDYHDFQKLVDMAIRQEDKYNRMEQKKRR 717 Score = 54.2 bits (112), Expect(4) = 5e-27 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + TF+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 184 LAEFLRVRPPTFSSTTNPVEASDWLHAIEKKLDLLQCTNQEKVSFASHQLHGPASEWWDH 363 Query: 694 LKDSR 708 + +R Sbjct: 364 FRLNR 378 Score = 31.8 bits (63), Expect(4) = 5e-27 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 / +1 Query: 1258 CHKCGQKGHYANKCTSQLRL 1317 C CG+ GHY++KC R+ Sbjct: 940 CFNCGEPGHYSDKCPKPRRV 999 Score = 27.6 bits (54), Expect(4) = 5e-27 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+ + DVI+ Sbjct: 1045 ARVNHVAAAEAQGAPDVIL 1101
>LOC_Os04g45430:12004.t04077:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6114 Score = 87.2 bits (184), Expect(3) = 5e-27 Identities = 35/90 (38%), Positives = 57/90 (63%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++S+ +Y +F++LARYA ++V K Sbjct: 2038 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSINEYLSQFNKLARYAPEEVDTDKK 2217 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2218 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2307 Score = 51.9 bits (107), Expect(3) = 5e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1822 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 2001 Query: 688 Q 690 + Sbjct: 2002 E 2004 Score = 33.6 bits (67), Expect(3) = 5e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2578 PSAVQCFRCNQMGHYARQC 2634 Score = 33.6 bits (67), Expect = 4.4 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = -1 / -1 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ + L+ V QLV+L VL+ ALL++ E +N R++ +E ++L+P Sbjct: 2220 LLLVCVHFLRGVPSQLVELT*VLIDTAVALLKSVEFFFLHVNSAFRHMSCTESRSELIP 2044
>LOC_Os04g47100:12004.t04237:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5959 Score = 84.9 bits (179), Expect(4) = 6e-27 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 1865 IAWDEFATAFRTAHVPESAIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 2044 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2045 KIRKFFKGIVVGMRLQLIAHDFPTFQHMIN 2134 Score = 51.9 bits (107), Expect(4) = 6e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1649 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1828 Query: 688 Q 690 + Sbjct: 1829 E 1831 Score = 33.6 bits (67), Expect(4) = 6e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2405 PSAVQCFRCNQMGHYARQC 2461 Score = 24.0 bits (46), Expect(4) = 6e-27 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +1 / +2 Query: 1381 RVNMVNAAEAENSSDVIMAV 1440 RVN + A A++++DV+M + Sbjct: 2603 RVNHIQAETAQDATDVVMGM 2662 Score = 32.7 bits (65), Expect = 8.4 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = -1 / -1 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ + L+ V QLV+ VL+ ALL++ E +N R++ +E +KL+P Sbjct: 2047 LLLVCVHFLRGVPSQLVEHT*VLIDTAVALLKSVEFFFLHINSAFRHMSCTESRSKLIP 1871
>LOC_Os07g16570:12007.t01517:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3186 Score = 78.5 bits (165), Expect(4) = 6e-27 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 568 RQEKFLEGLNDELSYPLMTGDYHDFQKLVDMAIRQEDKYNRMEQKKRR 711 Score = 51.0 bits (105), Expect(4) = 6e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 6e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 6e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os04g08540:12004.t00722:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9238 Score = 80.3 bits (169), Expect(4) = 6e-27 Identities = 39/108 (36%), Positives = 58/108 (53%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 5204 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 5383 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 +F GGL ++L L + D +F K + +E K+R Sbjct: 5384 CQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 5527 Score = 54.2 bits (112), Expect(4) = 6e-27 Identities = 22/65 (33%), Positives = 34/65 (52%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + +D V FA+ QL G AS WW Sbjct: 4994 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQDKVSFASHQLHGPASEWWDH 5173 Query: 694 LKDSR 708 + +R Sbjct: 5174 FRLNR 5188 Score = 34.1 bits (68), Expect(4) = 6e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 5744 VVCFNCGDPGHYADKCPKPRRV 5809 Score = 27.6 bits (54), Expect(4) = 6e-27 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+ + DVI+ Sbjct: 5855 ARVNHVAAAEAQGAPDVIL 5911
>LOC_Os03g35430:12003.t03032:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4425 Score = 76.7 bits (161), Expect(4) = 6e-27 Identities = 37/108 (34%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS++V +Y EF+ LARYA +DV + Sbjct: 391 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSHTVTEYLHEFNRLARYAPEDVRTDEE 570 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 571 RQERFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNRMEQKKRR 714 Score = 57.0 bits (118), Expect(4) = 6e-27 Identities = 23/65 (35%), Positives = 36/65 (55%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL +L TF+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 181 LAEFLRVRLPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 360 Query: 694 LKDSR 708 + +R Sbjct: 361 FRLNR 375 Score = 31.8 bits (63), Expect(4) = 6e-27 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +1 / +1 Query: 1258 CHKCGQKGHYANKCTSQLRL 1317 C CG GHYA+KC R+ Sbjct: 937 CFNCGDLGHYADKCPKPRRV 996 Score = 27.6 bits (54), Expect(4) = 6e-27 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+ + DVI+ Sbjct: 1042 ARVNHVAAAEAQGAPDVIL 1098
>LOC_Os01g45330:12001.t03989:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 7828 Score = 87.7 bits (185), Expect(3) = 6e-27 Identities = 36/90 (40%), Positives = 57/90 (63%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y +F++LARYA ++V K Sbjct: 1865 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSQFNKLARYAPEEVDTDKK 2044 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2045 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2134 Score = 51.9 bits (107), Expect(3) = 6e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1649 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1828 Query: 688 Q 690 + Sbjct: 1829 E 1831 Score = 33.6 bits (67), Expect(3) = 6e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2405 PSAVQCFRCNQMGHYARQC 2461 Score = 35.4 bits (71), Expect(2) = 0.008 Identities = 20/63 (31%), Positives = 34/63 (53%) Frame = -1 / -1 Query: 915 ELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTK 736 E L L+ + L+ V QL++L VL+ ALL++ E +N R++ +E +K Sbjct: 2059 EFPNLLLVCVHFLRGVPSQLIELT*VLIDTAVALLKSVEFFFLHVNSAFRHMSCTESRSK 1880 Query: 735 LVP 727 L+P Sbjct: 1879 LIP 1871 Score = 24.9 bits (48), Expect(2) = 0.008 Identities = 17/41 (41%), Positives = 18/41 (43%) Frame = -2 / -2 Query: 686 HQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNG 564 HQ A P NW A S+G L S QSSAS G Sbjct: 1827 HQSAAGPLNW*EA*SVFSTGVHCTKLSFLSTSFNQSSASTG 1705
>LOC_Os02g25770:12002.t02271:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9917 Score = 89.5 bits (189), Expect(2) = 6e-27 Identities = 37/90 (41%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR ++P S ++ +E+F RLKQG+NSV +Y +F++LARYA ++V K Sbjct: 1762 IAWDEFATAFRGAHVPESTIDTKKEEFNRLKQGNNSVNEYLSQFNKLARYAPKEVDTDKK 1941 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 1942 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2031 Score = 52.8 bits (109), Expect(2) = 6e-27 Identities = 17/61 (27%), Positives = 37/61 (60%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + + +A+ QL+G A+ WW Sbjct: 1546 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKMLYASHQLRGHAADWW 1725 Query: 688 Q 690 + Sbjct: 1726 E 1728 Score = 37.7 bits (76), Expect(2) = 2e-04 Identities = 21/63 (33%), Positives = 35/63 (55%) Frame = -1 / -3 Query: 915 ELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTK 736 EL L+ + L+ V QLV+L VL+ + ALL+ + L +N R++ +E +K Sbjct: 1956 ELPDFLLVCVHFLRGVPSQLVELT*VLIDTVVALLKPVKFLFLRINGAFRHMSSTESRSK 1777 Query: 735 LVP 727 L+P Sbjct: 1776 LIP 1768 Score = 28.1 bits (55), Expect(2) = 2e-04 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = -2 / -1 Query: 686 HQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNG 564 HQ ACP +W A S+G L S QSSAS G Sbjct: 1724 HQSAACPLSW*EA*SIFSTGVHCTKLSFLSTSFSQSSASTG 1602
>LOC_Os01g23210:12001.t02048:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5481 Score = 84.5 bits (178), Expect(2) = 6e-27 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 4888 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 5067 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 5068 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 5220 Score = 57.9 bits (120), Expect(2) = 6e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 4687 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 4866 Query: 694 LKDSR 708 + SR Sbjct: 4867 YEASR 4881
>LOC_Os03g29120:12003.t02531:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3041 Score = 84.9 bits (179), Expect(2) = 6e-27 Identities = 36/111 (32%), Positives = 62/111 (55%) Frame = +1 / +3 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++WDEF F+ ++P+ + + +FR LKQ +V +Y EFH LA YA +DV + Sbjct: 1584 GHTITWDEFSSVFKRSHVPAGMITLRKREFRYLKQEDLTVTEYLHEFHRLAHYAPEDVEN 1763 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK+++ + L L + E+F+K + ++N K+R Sbjct: 1764 DEDKQEKFLQGLKDEIAVQLLLEEYEDFEKLVDKAIQLESEHNRMKNCKRR 1916 Score = 57.4 bits (119), Expect(2) = 6e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1383 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVVFATHQLVGLASEWWDS 1562 Query: 694 LKDSR 708 + SR Sbjct: 1563 YEASR 1577
>LOC_Os09g17250:12009.t01512:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2892 Score = 84.5 bits (178), Expect(2) = 6e-27 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 1969 GHTITWNEFSSVFKRSHVPAGMIALRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 2148 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 2149 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 2301 Score = 57.9 bits (120), Expect(2) = 6e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1768 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 1947 Query: 694 LKDSR 708 + SR Sbjct: 1948 YEASR 1962
>LOC_Os04g50140:12004.t04527:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2518 Score = 87.2 bits (184), Expect(2) = 6e-27 Identities = 39/111 (35%), Positives = 61/111 (54%) Frame = +1 / +2 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LARYA +DV Sbjct: 1679 GHTITWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLARYAPEDVET 1858 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E F+K + + N K+R Sbjct: 1859 DEEKQEKFLQGLKDELAVQLLLEDYENFEKLVDKAMQLESEHNRMTNCKRR 2011 Score = 55.1 bits (114), Expect(2) = 6e-27 Identities = 24/65 (36%), Positives = 33/65 (50%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A +W+R + K ++ V FAT QL G AS WW Sbjct: 1478 LSEFLKTESPTFAIAVDPKEASEWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 1657 Query: 694 LKDSR 708 + SR Sbjct: 1658 YEASR 1672
>LOC_Os08g28328:12008.t02590:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2507 Score = 84.5 bits (178), Expect(2) = 6e-27 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 6e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os08g28319:12008.t02589:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2507 Score = 84.5 bits (178), Expect(2) = 6e-27 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 6e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os01g38010:12001.t03340:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 85.8 bits (181), Expect(2) = 6e-27 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.5 bits (117), Expect(2) = 6e-27 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os04g19040:12004.t01645:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.5 bits (178), Expect(2) = 6e-27 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 6e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os04g06390:12004.t00525:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.0 bits (177), Expect(2) = 6e-27 Identities = 38/111 (34%), Positives = 60/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFRRSHVPAGTITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYENFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 58.3 bits (121), Expect(2) = 6e-27 Identities = 25/65 (38%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW + Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDR 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os04g07340:12004.t00608:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2421 Score = 75.8 bits (159), Expect(4) = 7e-27 Identities = 37/108 (34%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF F+ +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 379 ITWLEFTAAFQKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNGEE 558 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 559 RQEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNRMEQKKRR 702 Score = 52.4 bits (108), Expect(4) = 7e-27 Identities = 21/65 (32%), Positives = 35/65 (53%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL+G AS WW Sbjct: 169 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLQGPASEWWDH 348 Query: 694 LKDSR 708 + +R Sbjct: 349 FRLNR 363 Score = 34.1 bits (68), Expect(4) = 7e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 919 VVCFNCGDPGHYADKCPKPRRV 984 Score = 28.1 bits (55), Expect(4) = 7e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1030 ARVNHVAAAEAQDAPDVIL 1086
>LOC_Os01g61270:12001.t05507:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5958 Score = 86.8 bits (183), Expect(3) = 7e-27 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG +SV +Y +F++LARYA ++V K Sbjct: 1865 IAWDEFAAAFRAAHVPESTIDMKKEEFNRLKQGHSSVNEYLSQFNKLARYAPEEVDTDKK 2044 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2045 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2134 Score = 51.9 bits (107), Expect(3) = 7e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1649 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1828 Query: 688 Q 690 + Sbjct: 1829 E 1831 Score = 33.6 bits (67), Expect(3) = 7e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2404 PSAVQCFRCNQMGHYARQC 2460
>LOC_Os07g03560:12007.t00246:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6131 Score = 87.7 bits (185), Expect(3) = 7e-27 Identities = 36/90 (40%), Positives = 57/90 (63%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y +F++LARYA ++V K Sbjct: 2037 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSQFNKLARYAPEEVDTDKK 2216 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2217 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2306 Score = 51.0 bits (105), Expect(3) = 7e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + + +A QL+G A+ WW Sbjct: 1821 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKMLYAFHQLRGPAADWW 2000 Query: 688 Q 690 + Sbjct: 2001 E 2003 Score = 33.6 bits (67), Expect(3) = 7e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +3 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2577 PSAVQCFRCNQMGHYARQC 2633 Score = 32.7 bits (65), Expect = 8.4 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = -1 / -1 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ L+ V QLV+L VL+ ALL++ E +N R++ +E ++L+P Sbjct: 2219 LLLICVYFLRGVPSQLVELT*VLIDTAVALLKSVEFFFLHVNSAFRHMSCTESRSELIP 2043
>LOC_Os08g21360:12008.t01931:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7926 Score = 81.7 bits (172), Expect(4) = 7e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 3892 ITWLEFTAAFRKTHIPSRVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 4071 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 4072 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNCMEQRKRR 4215 Score = 51.5 bits (106), Expect(4) = 7e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 3682 LAEFLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGSASEWWDH 3861 Query: 694 LKDSR 708 + +R Sbjct: 3862 FRLNR 3876 Score = 34.1 bits (68), Expect(4) = 7e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 4432 VVCFNCGDPGHYADKCPKPRRV 4497 Score = 28.1 bits (55), Expect(4) = 7e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 4543 ARVNHVAAAEAQDAPDVIL 4599
>LOC_Os06g32490:12006.t02947:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6533 Score = 80.8 bits (170), Expect(4) = 7e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 2580 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 2759 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 2760 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIR*EDKYNCMEQRKRR 2903 Score = 51.5 bits (106), Expect(4) = 7e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2370 LAEFLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGSASEWWDH 2549 Query: 694 LKDSR 708 + +R Sbjct: 2550 FRLNR 2564 Score = 34.1 bits (68), Expect(4) = 7e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +3 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3120 VVCFNCGDPGHYADKCPKPRRV 3185 Score = 28.1 bits (55), Expect(4) = 7e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 3231 ARVNHVAAAEAQDAPDVIL 3287
>LOC_Os03g59140:12003.t05163:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4641 Score = 85.8 bits (181), Expect(3) = 7e-27 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 625 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 804 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 805 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 894 Score = 51.9 bits (107), Expect(3) = 7e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 409 SKLTDFLRSRPPEFSQTIEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 588 Query: 688 Q 690 + Sbjct: 589 E 591 Score = 33.6 bits (67), Expect(3) = 7e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 1165 PSAVQCFRCNQMGHYARQC 1221
>LOC_Os07g16590:12007.t01519:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5326 Score = 79.0 bits (166), Expect(4) = 7e-27 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 1454 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVMEYLHEFNRLARYAPEDVRNDEE 1633 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 1634 RQEKFLEGLNDELSYPLMTGDYSDFQKLVDKAIRQEDKYNRMEQKKRR 1777 Score = 53.8 bits (111), Expect(4) = 7e-27 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + TF+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 1244 LAEFLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 1423 Query: 694 LKDSR 708 + +R Sbjct: 1424 FRLNR 1438 Score = 32.2 bits (64), Expect(4) = 7e-27 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHY +KC R+ Sbjct: 1994 VVCFNCGDPGHYTDKCPKPRRV 2059 Score = 28.6 bits (56), Expect(4) = 7e-27 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIMAVHWL 1449 ARVN V AAEA+++ DVI+ ++ Sbjct: 2105 ARVNHVAAAEAQDAPDVILGTFFV 2176
>LOC_Os01g26756:12001.t02355:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6631 Score = 82.6 bits (174), Expect(4) = 8e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 2597 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 2776 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 2777 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNFMEQKKRR 2920 Score = 51.5 bits (106), Expect(4) = 8e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2387 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 2566 Query: 694 LKDSR 708 + +R Sbjct: 2567 FRLNR 2581 Score = 34.1 bits (68), Expect(4) = 8e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3137 VVCFNCGDPGHYADKCPKPRRV 3202 Score = 26.3 bits (51), Expect(4) = 8e-27 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V A EA+++ DVI+ Sbjct: 3248 ARVNHVAAVEAQDAPDVIL 3304
>LOC_Os07g11590:12007.t01032:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4719 Score = 85.8 bits (181), Expect(3) = 8e-27 Identities = 35/90 (38%), Positives = 57/90 (63%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV ++ +F++LARYA ++V K Sbjct: 625 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEFLSQFNKLARYAPEEVDTDKK 804 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 805 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 894 Score = 51.9 bits (107), Expect(3) = 8e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 409 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 588 Query: 688 Q 690 + Sbjct: 589 E 591 Score = 33.6 bits (67), Expect(3) = 8e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 1165 PSAVQCFRCNQMGHYARQC 1221
>LOC_Os09g14310:12009.t01220:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.5 bits (178), Expect(3) = 8e-27 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.5 bits (117), Expect(3) = 8e-27 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAIDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 26.7 bits (52), Expect(3) = 8e-27 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSAKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os05g17450:12005.t01514:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.5 bits (178), Expect(3) = 8e-27 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.5 bits (117), Expect(3) = 8e-27 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 26.7 bits (52), Expect(3) = 8e-27 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSAKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os04g24998:12004.t02209:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.5 bits (178), Expect(3) = 8e-27 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPTGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.5 bits (117), Expect(3) = 8e-27 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 26.7 bits (52), Expect(3) = 8e-27 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSAKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os04g06660:12004.t00545:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.5 bits (178), Expect(3) = 8e-27 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVAEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.5 bits (117), Expect(3) = 8e-27 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 26.7 bits (52), Expect(3) = 8e-27 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSAKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os01g35360:12001.t03089:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.5 bits (178), Expect(3) = 8e-27 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.5 bits (117), Expect(3) = 8e-27 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 26.7 bits (52), Expect(3) = 8e-27 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSAKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os09g23860:12009.t02069:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3576 Score = 78.5 bits (165), Expect(4) = 8e-27 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 2594 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 2773 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 2774 RQEKFLEGLNDELSYPLMTGDYSDFQKLVDKAIRQEDKNNRMEQKKRR 2917 Score = 51.5 bits (106), Expect(4) = 8e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2384 LAEFLRVRPPIFSSTSNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 2563 Query: 694 LKDSR 708 + +R Sbjct: 2564 FRLNR 2578 Score = 33.6 bits (67), Expect(4) = 8e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3134 VVCFNCGDLGHYADKCPKPRRV 3199 Score = 28.1 bits (55), Expect(4) = 8e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 3245 ARVNHVAAAEAQDAPDVIL 3301
>LOC_Os11g40730:12011.t03615:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4861 Score = 85.8 bits (181), Expect(3) = 8e-27 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 2167 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 2346 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2347 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2436 Score = 51.9 bits (107), Expect(3) = 8e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1951 SKLTDFLRSRPLEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 2130 Query: 688 Q 690 + Sbjct: 2131 E 2133 Score = 33.6 bits (67), Expect(3) = 8e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2707 PSAVQCFRCNQMGHYARQC 2763 Score = 34.1 bits (68), Expect = 3.2 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = -1 / -2 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ + L+ V QLV+ VL+ ALL++ E L +N R++ +E +KL+P Sbjct: 2349 LLLVCVHFLRGVPSQLVEHT*VLIDTAVALLKSVEFLFLHVNSAFRHMSCTESRSKLIP 2173
>LOC_Os06g17610:12006.t01633:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 10506 Score = 82.6 bits (174), Expect(4) = 8e-27 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 7762 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 7941 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 7942 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 8085 Score = 52.4 bits (108), Expect(4) = 8e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 7552 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 7731 Query: 694 LKDSR 708 + +R Sbjct: 7732 FRLNR 7746 Score = 34.1 bits (68), Expect(4) = 8e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 8302 VVCFNCGDPGHYADKCPKPQRV 8367 Score = 27.2 bits (53), Expect(4) = 8e-27 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN + AAEA+ + DVI+ Sbjct: 8413 ARVNHIAAAEAQGAPDVIL 8469
>LOC_Os09g03040:12009.t00203:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 10056 Score = 84.0 bits (177), Expect(2) = 8e-27 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVEA 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 8e-27 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os10g18580:12010.t01406:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3285 Score = 78.0 bits (164), Expect(4) = 9e-27 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 568 RQEKFLEGLNDELSYPLMTGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 51.0 bits (105), Expect(4) = 9e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 9e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 9e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os07g22410:12007.t01945:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 10711 Score = 80.8 bits (170), Expect(4) = 9e-27 Identities = 38/108 (35%), Positives = 59/108 (54%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA ++V + + Sbjct: 6677 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEEVRNDEE 6856 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 6857 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 7000 Score = 52.4 bits (108), Expect(4) = 9e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 6467 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 6646 Query: 694 LKDSR 708 + +R Sbjct: 6647 FRLNR 6661 Score = 34.1 bits (68), Expect(4) = 9e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 7217 VVCFNCGDPGHYADKCPKPRRV 7282 Score = 29.0 bits (57), Expect(4) = 9e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 7328 ARVNHVTAAEAQDAPDVIL 7384
>LOC_Os01g06770:12001.t00560:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5959 Score = 87.7 bits (185), Expect(3) = 9e-27 Identities = 36/90 (40%), Positives = 57/90 (63%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y +F++LARYA ++V K Sbjct: 1865 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSQFNKLARYAPEEVDTDKK 2044 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2045 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2134 Score = 50.6 bits (104), Expect(3) = 9e-27 Identities = 17/61 (27%), Positives = 35/61 (57%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1649 SKLIDFLRSRPLEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1828 Query: 688 Q 690 + Sbjct: 1829 E 1831 Score = 33.6 bits (67), Expect(3) = 9e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2405 PSAVQCFRCNQMGHYARQC 2461
>LOC_Os12g38030:12012.t03484:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5959 Score = 86.3 bits (182), Expect(3) = 9e-27 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG +SV +Y +F++LARYA ++V K Sbjct: 1865 IAWDEFAAAFRAAHVPESTIDMKKEEFNRLKQGHSSVNEYLSQFNKLARYAPEEVNTDKK 2044 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2045 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2134 Score = 51.9 bits (107), Expect(3) = 9e-27 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1649 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1828 Query: 688 Q 690 + Sbjct: 1829 E 1831 Score = 33.6 bits (67), Expect(3) = 9e-27 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2405 PSAVQCFRCNQMGHYARQC 2461
>LOC_Os02g04940:12002.t00392:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7036 Score = 78.5 bits (165), Expect(4) = 9e-27 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 3005 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 3184 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 3185 RQEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEEKYNRMEQKKRR 3328 Score = 51.5 bits (106), Expect(4) = 9e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2795 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 2974 Query: 694 LKDSR 708 + +R Sbjct: 2975 FRLNR 2989 Score = 36.3 bits (73), Expect(4) = 9e-27 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYANKC R+ Sbjct: 3545 VVCFNCGDPGHYANKCPKPRRV 3610 Score = 28.1 bits (55), Expect(4) = 9e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 3656 ARVNHVAAAEAQDAPDVIL 3712
>LOC_Os05g17470:12005.t01516:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4203 Score = 78.5 bits (165), Expect(4) = 9e-27 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 568 RQEKFLEGLNDELSYPLMTGDYSDFQKLMDKAIRQEDKYNRMEQKKRR 711 Score = 51.5 bits (106), Expect(4) = 9e-27 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 9e-27 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 9e-27 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os05g47610:12005.t04196:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7269 Score = 86.8 bits (183), Expect(3) = 1e-26 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG +SV +Y +F++LARYA ++V K Sbjct: 3175 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGHSSVNEYLSQFNKLARYAPEEVDTDKK 3354 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 3355 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 3444 Score = 51.9 bits (107), Expect(3) = 1e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 2959 SKLTDFLRSRPPKFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 3138 Query: 688 Q 690 + Sbjct: 3139 E 3141 Score = 33.6 bits (67), Expect(3) = 1e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 3715 PSAVQCFRCNQMGHYARQC 3771
>LOC_Os07g24290:12007.t02126:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1749 Score = 81.7 bits (172), Expect(3) = 1e-26 Identities = 36/90 (40%), Positives = 51/90 (56%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W EFCR FR +P V + + +FR L QG+ +V KY EF+ LARYA +DV Sbjct: 454 GTEVTWAEFCRSFRKAQVPDGVVAQKKREFRALHQGNRTVIKYLHEFNRLARYAPEDVRT 633 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDK 981 K +F GL ++L L D +F+K Sbjct: 634 DAEKQEKFLAGLDDELTNQLISGDYADFEK 723 Score = 55.6 bits (115), Expect(3) = 1e-26 Identities = 22/60 (36%), Positives = 32/60 (53%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L +FL + TF+S P +A DW+ + K ++ V FAT QL+G AS WW Sbjct: 247 SKLPEFLRVRPPTFSSTTNPMEANDWLHAIEKKLNLLQYNDQEKVAFATHQLQGPASAWW 426 Score = 30.9 bits (61), Expect(3) = 1e-26 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 / +1 Query: 1255 TCHKCGQKGHYANKCTSQLR 1314 +C CG+ GH+A+KC R Sbjct: 1039 SCFNCGELGHFADKCPKPRR 1098
>LOC_Os06g03250:12006.t00218:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 11100 Score = 82.6 bits (174), Expect(4) = 1e-26 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 7066 ITWLEFAAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 7245 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 7246 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNFMEQRKRR 7389 Score = 51.5 bits (106), Expect(4) = 1e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 6856 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 7035 Query: 694 LKDSR 708 + +R Sbjct: 7036 FRLNR 7050 Score = 34.1 bits (68), Expect(4) = 1e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 7606 VVCFNCGDPGHYADKCPKPRRV 7671 Score = 28.1 bits (55), Expect(4) = 1e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 7717 ARVNHVAAAEAQDAPDVIL 7773
>LOC_Os04g21500:12004.t01883:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5296 Score = 80.3 bits (169), Expect(4) = 1e-26 Identities = 38/108 (35%), Positives = 58/108 (53%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IP V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 1262 ITWLEFTAAFRKTHIPLGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 1441 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 1442 RQEKFLGGLNDELSYPLMVGDHPDFQKLVDKAIRQEDKYNRMEQKKRR 1585 Score = 50.6 bits (104), Expect(4) = 1e-26 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V F + QL G AS WW Sbjct: 1052 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFVSHQLHGPASEWWDH 1231 Query: 694 LKDSR 708 + +R Sbjct: 1232 FRLNR 1246 Score = 34.1 bits (68), Expect(4) = 1e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 1802 VVCFNCGDPGHYADKCPKPRRV 1867 Score = 28.1 bits (55), Expect(4) = 1e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1913 ARVNHVAAAEAQDAPDVIL 1969
>LOC_Os02g33910:12002.t03032:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5410 Score = 85.8 bits (181), Expect(3) = 1e-26 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 1865 IAWDEFATAFRTAHVPESAIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 2044 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2045 KIRKFLKGIAVGMRLQLIAHDFPTFQHMIN 2134 Score = 51.9 bits (107), Expect(3) = 1e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1649 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1828 Query: 688 Q 690 + Sbjct: 1829 E 1831 Score = 33.6 bits (67), Expect(3) = 1e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2405 PSAVQCFRCNQMGHYARQC 2461 Score = 32.7 bits (65), Expect = 8.4 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = -1 / -1 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ + L+ V QLV+ VL+ ALL++ E +N R++ +E +KL+P Sbjct: 2047 LLLVCVHFLRGVPSQLVEHT*VLIDTAVALLKSVEFFFLHINSAFRHMSCTESRSKLIP 1871
>LOC_Os09g38180:12009.t03293:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5440 Score = 85.8 bits (181), Expect(3) = 1e-26 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 1808 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 1987 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 1988 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2077 Score = 51.9 bits (107), Expect(3) = 1e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1592 SKLTNFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1771 Query: 688 Q 690 + Sbjct: 1772 E 1774 Score = 33.6 bits (67), Expect(3) = 1e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2348 PSAVQCFRCNQMGHYARQC 2404 Score = 33.6 bits (67), Expect = 4.4 Identities = 21/63 (33%), Positives = 34/63 (53%) Frame = -1 / -1 Query: 915 ELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTK 736 EL L L+ + L+ V QLV+ VL+ ALL++ E +N R++ +E +K Sbjct: 2002 ELPDLLLVCVHFLRGVPSQLVEHT*VLIDTAVALLKSVEFFFLHVNSAFRHMSCTEGRSK 1823 Query: 735 LVP 727 L+P Sbjct: 1822 LIP 1814
>LOC_Os08g20770:12008.t01887:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4308 Score = 80.8 bits (170), Expect(4) = 1e-26 Identities = 39/108 (36%), Positives = 58/108 (53%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 +F GGL ++L L + D +F K + +E K+R Sbjct: 568 HQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNCMEQRKRR 711 Score = 49.2 bits (101), Expect(4) = 1e-26 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G A WW Sbjct: 178 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGSAFEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 1e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 1e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os06g48420:12006.t04528:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.5 bits (178), Expect(3) = 1e-26 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHAITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.5 bits (117), Expect(3) = 1e-26 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YETSR 420 Score = 26.3 bits (51), Expect(3) = 1e-26 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSVKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os06g48410:12006.t04527:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.5 bits (178), Expect(3) = 1e-26 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHAITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEGKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.5 bits (117), Expect(3) = 1e-26 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YETSR 420 Score = 26.3 bits (51), Expect(3) = 1e-26 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSVKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os04g18500:12004.t01592:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 78.5 bits (165), Expect(4) = 1e-26 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 382 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 561 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 562 RQEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNRMEQKKRR 705 Score = 51.5 bits (106), Expect(4) = 1e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 172 LAEFLRVRPPIFSSTTNPVEAGDWLHTIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 351 Query: 694 LKDSR 708 + +R Sbjct: 352 FRLNR 366 Score = 34.1 bits (68), Expect(4) = 1e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 922 VVCFNCGDPGHYADKCPKPRRV 987 Score = 28.1 bits (55), Expect(4) = 1e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1033 ARVNHVAAAEAQDAPDVIL 1089
>LOC_Os01g60380:12001.t05419:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4419 Score = 78.5 bits (165), Expect(4) = 1e-26 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 385 ITWLEFAAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 564 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 565 RQEKFLEGLNDELSYPLMTGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 708 Score = 51.5 bits (106), Expect(4) = 1e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 175 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 354 Query: 694 LKDSR 708 + +R Sbjct: 355 FRLNR 369 Score = 34.1 bits (68), Expect(4) = 1e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 925 VVCFNCGDPGHYADKCPKPRRV 990 Score = 28.1 bits (55), Expect(4) = 1e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1036 ARVNHVAAAEAQDAPDVIL 1092
>LOC_Os04g05140:12004.t00396:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3125 Score = 84.9 bits (179), Expect(2) = 1e-26 Identities = 37/111 (33%), Positives = 62/111 (55%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA+YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAQYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.5 bits (117), Expect(2) = 1e-26 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os04g05270:12004.t00409:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3103 Score = 84.9 bits (179), Expect(2) = 1e-26 Identities = 37/111 (33%), Positives = 62/111 (55%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA+YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAQYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.5 bits (117), Expect(2) = 1e-26 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os08g11280:12008.t01010:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2810 Score = 85.4 bits (180), Expect(2) = 1e-26 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +3 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 1887 GHTITWNEFSSVFKKSHVPAGMITLRKREFRYLKQGDLTVTEYMHEFYRLAHYAPEDVET 2066 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 2067 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 2219 Score = 56.1 bits (116), Expect(2) = 1e-26 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1686 LSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASGWWDS 1865 Query: 694 LKDSR 708 + SR Sbjct: 1866 YEASR 1880
>LOC_Os12g30240:12012.t02730:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2806 Score = 83.5 bits (176), Expect(2) = 1e-26 Identities = 36/111 (32%), Positives = 62/111 (55%) Frame = +1 / +2 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV + Sbjct: 1883 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVEN 2062 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GLK++L + L L D E+F+K + + N K+R Sbjct: 2063 DEDQQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 2215 Score = 57.9 bits (120), Expect(2) = 1e-26 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1682 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 1861 Query: 694 LKDSR 708 + SR Sbjct: 1862 YEASR 1876
>LOC_Os06g15070:12006.t01381:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.5 bits (178), Expect(2) = 1e-26 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.0 bits (118), Expect(2) = 1e-26 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWGS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os12g30890:12012.t02795:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 83.5 bits (176), Expect(2) = 1e-26 Identities = 37/111 (33%), Positives = 60/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYENFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 1e-26 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os02g20240:12002.t01816:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1194 Score = 83.5 bits (176), Expect(2) = 1e-26 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GYTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYHLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 57.9 bits (120), Expect(2) = 1e-26 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os02g46880:12002.t04274:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5901 Score = 85.8 bits (181), Expect(3) = 1e-26 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 1807 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 1986 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 1987 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2076 Score = 51.9 bits (107), Expect(3) = 1e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1591 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1770 Query: 688 Q 690 + Sbjct: 1771 E 1773 Score = 33.6 bits (67), Expect(3) = 1e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2347 PSAVQCFRCNQMGHYARQC 2403 Score = 33.6 bits (67), Expect = 4.4 Identities = 21/63 (33%), Positives = 34/63 (53%) Frame = -1 / -1 Query: 915 ELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTK 736 EL L L+ + L+ V QLV+ VL+ ALL++ E +N R++ +E +K Sbjct: 2001 ELPDLLLVCVHFLRGVPSQLVEHT*VLIDTAVALLKSVEFFFLHVNSAFRHMSCTEGRSK 1822 Query: 735 LVP 727 L+P Sbjct: 1821 LIP 1813
>LOC_Os04g55020:12004.t04975:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5960 Score = 86.3 bits (182), Expect(3) = 1e-26 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 1866 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDSDKK 2045 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2046 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2135 Score = 51.9 bits (107), Expect(3) = 1e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1650 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1829 Query: 688 Q 690 + Sbjct: 1830 E 1832 Score = 33.1 bits (66), Expect(3) = 1e-26 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +1 / +3 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ + C +C Q GHYA +C Sbjct: 2406 PSAIQCFRCNQMGHYARQC 2462
>LOC_Os12g26780:12012.t02391:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3711 Score = 76.2 bits (160), Expect(4) = 1e-26 Identities = 36/111 (32%), Positives = 57/111 (51%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W EF F+ +IP+ V + +FR L QGS SV +Y +F+ LARYA +DV Sbjct: 382 GEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRT 561 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GL ++L AL D +F + + +E K+R Sbjct: 562 DEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRR 714 Score = 52.8 bits (109), Expect(4) = 1e-26 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G A+ WW Sbjct: 181 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 360 Query: 694 LKDSR 708 + R Sbjct: 361 FRQGR 375 Score = 32.2 bits (64), Expect(4) = 1e-26 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +1 / +1 Query: 1258 CHKCGQKGHYANKCTSQLRL 1317 C CG GHYA+KC R+ Sbjct: 952 CFNCGDPGHYADKCPKPRRV 1011 Score = 29.9 bits (59), Expect(4) = 1e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+N+ DV++ Sbjct: 1057 ARVNHVAAAEAQNAPDVVL 1113
>LOC_Os07g45610:12007.t04198:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 10788 Score = 81.3 bits (171), Expect(4) = 1e-26 Identities = 39/108 (36%), Positives = 58/108 (53%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V ++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 6754 ITWLEFTAAFRKTHIPSGVVSLKMKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 6933 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 6934 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 7077 Score = 52.4 bits (108), Expect(4) = 1e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 6544 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 6723 Query: 694 LKDSR 708 + +R Sbjct: 6724 FRLNR 6738 Score = 34.1 bits (68), Expect(4) = 1e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 7294 VVCFNCGDPGHYADKCPKPRRV 7359 Score = 28.1 bits (55), Expect(4) = 1e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 7405 ARVNHVAAAEAQDAPDVIL 7461
>LOC_Os02g41740:12002.t03761:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4511 Score = 85.4 bits (180), Expect(3) = 1e-26 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 625 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 804 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 805 KIRKFLKGIAVGMRLQLLAHDFPTFQYMIN 894 Score = 51.9 bits (107), Expect(3) = 1e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 409 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 588 Query: 688 Q 690 + Sbjct: 589 E 591 Score = 33.1 bits (66), Expect(3) = 1e-26 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P V C +C Q GHYA +C Sbjct: 1165 PTTVQCFRCDQMGHYARQC 1221 Score = 34.1 bits (68), Expect = 3.2 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = -1 / -3 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ + L+ V QLV+ VL+ ALL++ E L +N R++ +E +KL+P Sbjct: 807 LLLVCVHFLRGVPSQLVEHT*VLIDTAVALLKSVEFLFLHVNSAFRHMSCTESRSKLIP 631
>LOC_Os08g30190:12008.t02772:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4529 Score = 84.9 bits (179), Expect(3) = 1e-26 Identities = 36/90 (40%), Positives = 55/90 (61%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG+NS +Y F++LARYA ++V K Sbjct: 1869 IAWDEFAMAFRAAHMPESTIDMKKEEFNRLKQGNNSANEYLSLFNKLARYAPEEVETDKK 2048 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2049 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2138 Score = 51.9 bits (107), Expect(3) = 1e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1653 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1832 Query: 688 Q 690 + Sbjct: 1833 E 1835 Score = 33.6 bits (67), Expect(3) = 1e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +3 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2409 PSAVQCFRCNQMGHYARQC 2465 Score = 34.1 bits (68), Expect = 3.2 Identities = 20/59 (33%), Positives = 34/59 (57%) Frame = -1 / -1 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ + L+ V QLV+ VL+ + ALL++ E L +N R++ +E +KL+P Sbjct: 2051 LLLVCLHFLRGVPSQLVEQA*VLICTVVALLKSVEFLFLHINGAFRHMSCTESHSKLIP 1875
>LOC_Os11g42650:12011.t03795:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 13740 Score = 83.1 bits (175), Expect(4) = 1e-26 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 8074 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 8253 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 8254 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 8397 Score = 51.5 bits (106), Expect(4) = 1e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 7864 LAEFLRVRPLVFSSTTNPVEASDWLHAIEKKLDLLQCIDQEKVSFASHQLHGPASEWWDH 8043 Query: 694 LKDSR 708 + +R Sbjct: 8044 FRLNR 8058 Score = 34.1 bits (68), Expect(4) = 1e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 8614 VVCFNCGDPGHYADKCLKPRRV 8679 Score = 28.1 bits (55), Expect(4) = 1e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 8725 ARVNHVAAAEAQDAPDVIL 8781
>LOC_Os02g23840:12002.t02082:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6633 Score = 78.0 bits (164), Expect(4) = 1e-26 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV KY EF+ LARYA +DV + + Sbjct: 2599 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTKYLHEFNRLARYAPEDVRNDEE 2778 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + ++ K+R Sbjct: 2779 RQEKFLEGLNDELSYPLMTGDYPDFQKLVDKAIRQEDKYNRMKQKKRR 2922 Score = 53.8 bits (111), Expect(4) = 1e-26 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + TF+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2389 LAEFLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 2568 Query: 694 LKDSR 708 + +R Sbjct: 2569 FRLNR 2583 Score = 33.6 bits (67), Expect(4) = 1e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3139 VVCFNCGDPGHYADKCPKLRRV 3204 Score = 28.1 bits (55), Expect(4) = 1e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 3250 ARVNHVAAAEAQDAPDVIL 3306
>LOC_Os09g01100:12009.t00012:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5412 Score = 76.2 bits (160), Expect(4) = 1e-26 Identities = 36/111 (32%), Positives = 57/111 (51%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W EF F+ +IP+ V + +FR L QGS SV +Y +F+ LARYA +DV Sbjct: 1354 GEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRT 1533 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GL ++L AL D +F + + +E K+R Sbjct: 1534 NEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRR 1686 Score = 52.8 bits (109), Expect(4) = 1e-26 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G A+ WW Sbjct: 1153 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 1332 Query: 694 LKDSR 708 + R Sbjct: 1333 FRQGR 1347 Score = 33.6 bits (67), Expect(4) = 1e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 1918 VICFNCGDPGHYADKCPKPRRV 1983 Score = 29.9 bits (59), Expect(4) = 1e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+N+ DV++ Sbjct: 2029 ARVNHVAAAEAQNAPDVVL 2085
>LOC_Os08g27110:12008.t02475:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4436 Score = 78.5 bits (165), Expect(4) = 2e-26 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 394 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 573 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 574 RQEKFLEGLNDELSYPLMTGDYSDFQKLVDKAIRQEDKYNRMEQKKRR 717 Score = 51.0 bits (105), Expect(4) = 2e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 184 LAEFLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 363 Query: 694 LKDSR 708 + +R Sbjct: 364 FRLNR 378 Score = 34.1 bits (68), Expect(4) = 2e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 934 VVCFNCGDPGHYADKCPKPRRV 999 Score = 28.1 bits (55), Expect(4) = 2e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1045 ARVNHVAAAEAQDAPDVIL 1101
>LOC_Os11g12060:12011.t01093:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4452 Score = 78.5 bits (165), Expect(4) = 2e-26 Identities = 37/111 (33%), Positives = 57/111 (51%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W EF F+ +IP+ V + +FR L QGS SV KY +F+ LARYA +DV Sbjct: 394 GEPITWQEFTAAFKKTHIPAGVVALKKREFRELNQGSRSVTKYLHDFNRLARYAPEDVRT 573 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GL ++L AL D +F + + +E K+R Sbjct: 574 DEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRR 726 Score = 52.8 bits (109), Expect(4) = 2e-26 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G A+ WW Sbjct: 193 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 372 Query: 694 LKDSR 708 + R Sbjct: 373 FRQGR 387 Score = 32.2 bits (64), Expect(4) = 2e-26 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +1 / +1 Query: 1258 CHKCGQKGHYANKCTSQLRL 1317 C CG GHYA+KC R+ Sbjct: 964 CFNCGDPGHYADKCPKPRRV 1023 Score = 28.1 bits (55), Expect(4) = 2e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1069 ARVNHVAAAEAQSAPDVIL 1125
>LOC_Os05g15560:12005.t01327:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4452 Score = 78.5 bits (165), Expect(4) = 2e-26 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 2593 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 2772 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 2773 RQEKFLEGLNDELSYPLMTGDYSDFQKLVDKAIRQEDKYNRMEQKKRR 2916 Score = 51.0 bits (105), Expect(4) = 2e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2383 LAEFLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 2562 Query: 694 LKDSR 708 + +R Sbjct: 2563 FRLNR 2577 Score = 34.1 bits (68), Expect(4) = 2e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3133 VVCFNCGDPGHYADKCPKPRRV 3198 Score = 28.1 bits (55), Expect(4) = 2e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 3244 ARVNHVAAAEAQDAPDVIL 3300
>LOC_Os08g22740:12008.t02047:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3682 Score = 85.8 bits (181), Expect(2) = 2e-26 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++WDEF F+ ++P+ + + +FR LKQ +V +Y EFH LA YA +DV Sbjct: 1465 GHTITWDEFSSIFKRSHVPAGMITLRKREFRYLKQEDLTVIEYLHEFHRLAHYAPEDVET 1644 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L + D E+F+K + ++N K+R Sbjct: 1645 DEDK*EKFLQGLKDELAVQLLIEDYEDFEKLVDKAIQLESEHNRMKNCKRR 1797 Score = 55.1 bits (114), Expect(2) = 2e-26 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + +F P DA DW+R + K + V FAT QL G AS WW Sbjct: 1264 LSEFLKTEPPSFAIAVDPMDASDWLRTVEKKLGLIQCTD*ERVGFATHQLVGPASEWWDS 1443 Query: 694 LKDSR 708 + SR Sbjct: 1444 YEASR 1458
>LOC_Os01g47960:12001.t04242:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3651 Score = 84.5 bits (178), Expect(2) = 2e-26 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +2 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 1889 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 2068 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 2069 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 2221 Score = 56.5 bits (117), Expect(2) = 2e-26 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1688 LSEFLKTGPPTFAMAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 1867 Query: 694 LKDSR 708 + SR Sbjct: 1868 YEASR 1882
>LOC_Os08g11010:12008.t00983:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2813 Score = 84.5 bits (178), Expect(2) = 2e-26 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +3 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 1887 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 2066 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 2067 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLKSEHNRMTNCKRR 2219 Score = 56.5 bits (117), Expect(2) = 2e-26 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1686 LSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 1865 Query: 694 LKDSR 708 + SR Sbjct: 1866 YEASR 1880
>LOC_Os06g15950:12006.t01468:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2601 Score = 84.5 bits (178), Expect(2) = 2e-26 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 1678 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 1857 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 1858 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 2010 Score = 56.5 bits (117), Expect(2) = 2e-26 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1477 LSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 1656 Query: 694 LKDSR 708 + SR Sbjct: 1657 YEASR 1671
>LOC_Os11g27950:12011.t02409:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2429 Score = 81.7 bits (172), Expect(2) = 2e-26 Identities = 36/112 (32%), Positives = 62/112 (55%) Frame = +1 / +3 Query: 709 GGRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVP 888 GG+ ++W+EF + F +IP+ V + +FR LKQ ++V +Y EF+ ARYA +DV Sbjct: 1683 GGQPITWEEFTKGFNKTHIPAGVVALKKREFRALKQKDHTVAEYLHEFNRPARYAPEDVC 1862 Query: 889 DQKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 K + +F GLK++L + L HD +F + + ++N K++ Sbjct: 1863 TDKERQEKFLEGLKDELSVTLISHDYVDFQQLVDKAIRLEDKKNRMDNCKRK 2018 Score = 59.3 bits (123), Expect(2) = 2e-26 Identities = 24/67 (35%), Positives = 38/67 (56%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ ++ K E + ++ V FA+ QL+G AS WW Sbjct: 1485 LADFLRVRPPTFSSTTNPVEAGDWLHNIEKKLELLHYTDQEKVVFASHQLQGPASEWWDH 1664 Query: 694 LKDSRGG 714 + +R G Sbjct: 1665 FRMNRAG 1685
>LOC_Os02g46240:12002.t04211:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 4278 Score = 84.5 bits (178), Expect(3) = 2e-26 Identities = 36/90 (40%), Positives = 55/90 (61%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 232 IAWDEFATAFRVAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 411 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 412 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 501 Score = 51.9 bits (107), Expect(3) = 2e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 16 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 195 Query: 688 Q 690 + Sbjct: 196 E 198 Score = 33.6 bits (67), Expect(3) = 2e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 772 PSAVQCFRCNQMGHYARQC 828 Score = 34.1 bits (68), Expect = 3.2 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = -1 / -1 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ + L+ V QLV+ VL+ ALL++ E L +N R++ +E +KL+P Sbjct: 414 LLLVCVHFLRGVPSQLVEHT*VLIDTAVALLKSVEFLFLHVNSAFRHMSYTESRSKLIP 238
>LOC_Os11g26360:12011.t02252:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3318 Score = 77.1 bits (162), Expect(4) = 2e-26 Identities = 38/108 (35%), Positives = 56/108 (51%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRTDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 568 RQEKFLAGLNDELSYPLMTGDYPDF*KLVDKAIRQEDKYNRIEQKKRR 711 Score = 51.0 bits (105), Expect(4) = 2e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 2e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 2e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095 Score = 34.1 bits (68), Expect = 3.2 Identities = 14/50 (28%), Positives = 29/50 (58%) Frame = -1 / -1 Query: 696 KLLPPNRSLPLQLECCKLDIILWTHIATLEMLVHITDPIFRVKRLVARSE 547 +++PP R +QL CK D++L + + +++L++ +PI R+ E Sbjct: 360 EVIPPFRGRAMQLMGCK*DLLLISALKQIQLLLYGMEPITSFNRISGARE 211
>LOC_Os08g21030:12008.t01906:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1266 Score = 84.9 bits (179), Expect(2) = 2e-26 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LAR+A +DV Sbjct: 427 GHTITWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLARHAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E F+K + + N K+R Sbjct: 607 DEEKQEKFLQGLKDELAVQLLLEDYENFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.1 bits (116), Expect(2) = 2e-26 Identities = 24/65 (36%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A +W+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASEWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os06g35040:12006.t03201:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5946 Score = 85.8 bits (181), Expect(3) = 2e-26 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 1867 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 2046 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2047 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2136 Score = 51.5 bits (106), Expect(3) = 2e-26 Identities = 17/61 (27%), Positives = 35/61 (57%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL + F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1651 SKLTDFLRSHPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1830 Query: 688 Q 690 + Sbjct: 1831 E 1833 Score = 33.6 bits (67), Expect(3) = 2e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2407 PSAVQCFRCNQMGHYARQC 2463
>LOC_Os07g01430:12007.t00042:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5960 Score = 85.4 bits (180), Expect(3) = 2e-26 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 1866 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 2045 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2046 KIRKFLKGIVVGMRLQLLAHDFPTFQHMIN 2135 Score = 51.9 bits (107), Expect(3) = 2e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1650 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQFTPVEKTLYASHQLRGPAADWW 1829 Query: 688 Q 690 + Sbjct: 1830 E 1832 Score = 33.6 bits (67), Expect(3) = 2e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +3 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2406 PSAVQCFRCNQMGHYARQC 2462 Score = 34.1 bits (68), Expect = 3.2 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = -1 / -1 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ + L+ V QLV+ VL+ ALL++ E L +N R++ +E +KL+P Sbjct: 2048 LLLVCVHFLRGVPSQLVEHT*VLIDTAVALLKSVEFLFLHVNSAFRHMSCTESRSKLIP 1872
>LOC_Os04g56260:12004.t05098:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5958 Score = 85.4 bits (180), Expect(3) = 2e-26 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 1864 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVGTDKK 2043 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2044 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2133 Score = 51.9 bits (107), Expect(3) = 2e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1648 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1827 Query: 688 Q 690 + Sbjct: 1828 E 1830 Score = 33.6 bits (67), Expect(3) = 2e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2404 PSAVQCFRCNQMGHYARQC 2460 Score = 33.1 bits (66), Expect = 6.1 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = -1 / -1 Query: 903 LTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTKLVP 727 L L+ + L+ V QLV+ VL+ ALL++ E +N R++ +E +KL+P Sbjct: 2046 LLLVCAHFLRGVPSQLVEHT*VLIDTAVALLKSVEFFFLHVNSAFRHMSCTESRSKLIP 1870
>LOC_Os04g53590:12004.t04833:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5960 Score = 85.4 bits (180), Expect(3) = 2e-26 Identities = 36/90 (40%), Positives = 55/90 (61%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR ++P S ++ +E+F RLKQG +SV +Y +F++LARYA ++V K Sbjct: 1866 IAWDEFATAFRVAHVPESTIDMKKEEFNRLKQGHSSVNEYLSQFNKLARYAPEEVDTDKK 2045 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2046 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2135 Score = 51.9 bits (107), Expect(3) = 2e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1650 SKLTDFLRSRPPEFSQTIEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1829 Query: 688 Q 690 + Sbjct: 1830 E 1832 Score = 33.6 bits (67), Expect(3) = 2e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +3 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2406 PSAVQCFRCNQMGHYARQC 2462
>LOC_Os02g36100:12002.t03247:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 7068 Score = 88.6 bits (187), Expect(3) = 2e-26 Identities = 37/90 (41%), Positives = 56/90 (62%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG+NSV +Y +F++LARYA + V K Sbjct: 3053 ITWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNNSVNEYLSQFNKLARYAPEGVDTDKK 3232 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 3233 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 3322 Score = 49.2 bits (101), Expect(3) = 2e-26 Identities = 17/61 (27%), Positives = 35/61 (57%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 2837 SKLTDFLRSRPPEFSQTV*PVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAANWW 3016 Query: 688 Q 690 + Sbjct: 3017 E 3019 Score = 33.6 bits (67), Expect(3) = 2e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 3593 PSAVQCFRCNQMGHYARQC 3649 Score = 34.5 bits (69), Expect(2) = 0.026 Identities = 21/63 (33%), Positives = 36/63 (57%) Frame = -1 / -3 Query: 915 ELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTK 736 EL L L+ + L+ V QLV+L VL+ + ALL+ + L ++ R++ +E +K Sbjct: 3247 ELPDLLLVCVHSLRGVPSQLVELT*VLIDTVVALLKPVKFLFLHIDGAFRHMSCTESRSK 3068 Query: 735 LVP 727 L+P Sbjct: 3067 LIP 3059 Score = 24.0 bits (46), Expect(2) = 0.026 Identities = 16/41 (39%), Positives = 18/41 (43%) Frame = -2 / -1 Query: 686 HQIEACPFNWNVANLT*SSGRTLLHSKCLFISRIQSSASNG 564 HQ A P +W A S+G L S QSSAS G Sbjct: 3015 HQFAAGPLSW*EA*SVFSTGVHCTKLSFLSTSFSQSSASTG 2893
>LOC_Os08g20110:12008.t01829:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4479 Score = 76.7 bits (161), Expect(3) = 2e-26 Identities = 32/100 (32%), Positives = 54/100 (54%) Frame = +1 / +3 Query: 682 WWQQLKDSRGGRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHEL 861 W + G ++W EFC+ F +P V + + +FR L+QG+ +V +Y +F+ L Sbjct: 453 WDNYMVTRPAGTEVTWLEFCKSFNKAQVPERIVAQKKREFRSLQQGTRTVIEYLHKFNRL 632 Query: 862 ARYALQDVPDQKSKIYQFRGGLKEDLQLALALHDPEEFDK 981 ARYA +DV + +F G+ ++L L D E+F+K Sbjct: 633 ARYAPEDVRTDDERQEKFLSGIDDELTNQLISRDYEDFEK 752 Score = 58.3 bits (121), Expect(3) = 2e-26 Identities = 23/67 (34%), Positives = 36/67 (53%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L +FL +L TF+ P +A DW+ + K + ++ V FAT QL+G AS+WW Sbjct: 276 SKLLEFLRVKLPTFSRTTNPIEATDWLHAIEKKLKLLQCNDQEKVAFATHQLQGPASVWW 455 Query: 688 QQLKDSR 708 +R Sbjct: 456 DNYMVTR 476 Score = 23.5 bits (45), Expect(3) = 2e-26 Identities = 11/34 (32%), Positives = 15/34 (44%) Frame = +3 / +3 Query: 402 DDDGSYQCKYSDAVAVDPGESQSSARQFPAGWQS 503 +DD + VA D S ++A PA W S Sbjct: 165 NDDATDTTTVPSGVAADAAASTTAAAAEPAVWSS 266 Score = 35.0 bits (70), Expect(2) = 0.001 Identities = 15/46 (32%), Positives = 28/46 (60%) Frame = -1 / -2 Query: 717 PATSGILKLLPPNRSLPLQLECCKLDIILWTHIATLEMLVHITDPI 580 P+ +G ++PPNRS LQL C K +++L + ++L++ P+ Sbjct: 485 PSWTGHHVVVPPNRSGTLQLVCSKSNLLLVVAL*KFQLLLNSMKPV 348 Score = 28.6 bits (56), Expect(2) = 0.001 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -2 / -3 Query: 839 YLYTELLPCFKRLNFSRISSTKLEGM*WDLKSRQNSSQDITLP 711 Y T L+PC + N +T L G LK QNS+Q ++P Sbjct: 610 YSITVLVPCCRERNSLFFCATILSGTCALLKLLQNSNQVTSVP 482
>LOC_Os08g11430:12008.t01025:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4182 Score = 76.2 bits (160), Expect(4) = 2e-26 Identities = 36/111 (32%), Positives = 57/111 (51%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W EF F+ +IP+ V + +FR L QGS SV +Y +F+ LARYA +DV Sbjct: 388 GEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRT 567 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GL ++L AL D +F + + +E K+R Sbjct: 568 DEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQENKYNRMEQKKRR 720 Score = 52.8 bits (109), Expect(4) = 2e-26 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G A+ WW Sbjct: 187 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 366 Query: 694 LKDSR 708 + R Sbjct: 367 FRQGR 381 Score = 32.2 bits (64), Expect(4) = 2e-26 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +1 / +1 Query: 1258 CHKCGQKGHYANKCTSQLRL 1317 C CG GHYA+KC R+ Sbjct: 958 CFNCGDPGHYADKCPKPRRV 1017 Score = 29.9 bits (59), Expect(4) = 2e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+N+ DV++ Sbjct: 1063 ARVNHVAAAEAQNAPDVVL 1119
>LOC_Os08g11830:12008.t01063:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4310 Score = 76.2 bits (160), Expect(4) = 2e-26 Identities = 36/111 (32%), Positives = 57/111 (51%) Frame = +1 / +3 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W EF F+ +IP+ V + +FR L QGS SV +Y +F+ LARYA +DV Sbjct: 3111 GEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRT 3290 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GL ++L AL D +F + + +E K+R Sbjct: 3291 DEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAICQEDKYNRMEQKKRR 3443 Score = 52.8 bits (109), Expect(4) = 2e-26 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G A+ WW Sbjct: 2910 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 3089 Query: 694 LKDSR 708 + R Sbjct: 3090 FRQGR 3104 Score = 32.2 bits (64), Expect(4) = 2e-26 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +1 / +3 Query: 1258 CHKCGQKGHYANKCTSQLRL 1317 C CG GHYA+KC R+ Sbjct: 3681 CFNCGDPGHYADKCPKPRRV 3740 Score = 29.9 bits (59), Expect(4) = 2e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+N+ DV++ Sbjct: 3786 ARVNHVAAAEAQNAPDVVL 3842
>LOC_Os12g16050:12012.t01458:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4329 Score = 78.0 bits (164), Expect(4) = 2e-26 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 385 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 564 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 565 RQEKFLEGLNDELSYPLMAGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 708 Score = 51.0 bits (105), Expect(4) = 2e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 175 LAEFLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 354 Query: 694 LKDSR 708 + +R Sbjct: 355 FRLNR 369 Score = 34.1 bits (68), Expect(4) = 2e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 925 VVCFNCGDPGHYADKCPKPRRV 990 Score = 28.1 bits (55), Expect(4) = 2e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1036 ARVNHVAAAEAQDAPDVIL 1092
>LOC_Os11g17230:12011.t01501:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4057 Score = 80.3 bits (169), Expect(3) = 2e-26 Identities = 35/100 (35%), Positives = 52/100 (52%) Frame = +1 / +1 Query: 682 WWQQLKDSRGGRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHEL 861 W + G ++W EFCR FR +P V + + +FR L QG+ +V Y EF+ L Sbjct: 445 WDNHMATRPPGSEVTWAEFCRSFRKAQVPDGVVAQKKREFRALHQGNRTVIDYLYEFNRL 624 Query: 862 ARYALQDVPDQKSKIYQFRGGLKEDLQLALALHDPEEFDK 981 ARYA +DV K +F GL ++L L D +F++ Sbjct: 625 ARYAPEDVRTDAEKQEKFLAGLDDELTNQLISRDYADFER 744 Score = 56.1 bits (116), Expect(3) = 2e-26 Identities = 22/60 (36%), Positives = 33/60 (55%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L +FL + TF+S P +A+DW+ + K ++ V FAT QL+G AS WW Sbjct: 268 SKLPEFLCVRPPTFSSTTNPMEAKDWLHAIEKKLNLLQCNDQEKVTFATHQLQGPASAWW 447 Score = 33.1 bits (66), Expect(3) = 2e-26 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +1 / +1 Query: 1255 TCHKCGQKGHYANKCTSQLR 1314 +C KCG+ GH+A+KC R Sbjct: 1060 SCFKCGELGHFADKCPKPRR 1119 Score = 29.5 bits (58), Expect(2) = 0.52 Identities = 11/41 (26%), Positives = 26/41 (63%) Frame = -1 / -2 Query: 693 LLPPNRSLPLQLECCKLDIILWTHIATLEMLVHITDPIFRV 571 ++PP+ L+L C + D++L + +++L + +P+FR+ Sbjct: 453 IVPPS*RGTLELVCGESDLLLIIALQEVQLLFYGMEPVFRL 331 Score = 24.4 bits (47), Expect(2) = 0.52 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -2 / -3 Query: 830 TELLPCFKRLNFSRISSTKLEGM*WDLKSRQNSSQDITLP 711 T LLP + LN +T G LK RQNS+Q + P Sbjct: 593 TVLLP*WSALNSLFFCATTPSGTCAFLKLRQNSAQVTSEP 474
>LOC_Os05g16880:12005.t01457:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 83.1 bits (175), Expect(3) = 2e-26 Identities = 37/111 (33%), Positives = 60/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ A YA +DV Sbjct: 427 GHTITWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRSAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHSRMTNCKRR 759 Score = 56.5 bits (117), Expect(3) = 2e-26 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420 Score = 26.7 bits (52), Expect(3) = 2e-26 Identities = 8/31 (25%), Positives = 14/31 (45%) Frame = +1 / +1 Query: 1222 PQIQFRQPADVTCHKCGQKGHYANKCTSQLR 1314 PQ+ + C+ C + GH++ C R Sbjct: 1147 PQMDSSAKKTLICYNCKEPGHFSRDCPQPKR 1239
>LOC_Os10g18650:12010.t01413:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 78.0 bits (164), Expect(4) = 2e-26 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 388 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 567 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 568 RQEKFLEGLNDELSYPLMTGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 711 Score = 51.0 bits (105), Expect(4) = 2e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 178 LAEFLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 357 Query: 694 LKDSR 708 + +R Sbjct: 358 FRLNR 372 Score = 34.1 bits (68), Expect(4) = 2e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 928 VVCFNCGDPGHYADKCPKPRRV 993 Score = 28.1 bits (55), Expect(4) = 2e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1039 ARVNHVAAAEAQDAPDVIL 1095
>LOC_Os01g63550:12001.t05724:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4210 Score = 84.9 bits (179), Expect(3) = 2e-26 Identities = 35/90 (38%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P ++ +E+F RLKQG++SV +Y +F++LARYA ++V K Sbjct: 232 IAWDEFATAFRAAHVPEITIDMKKEEFNRLKQGNSSVNEYLSQFNKLARYAPEEVDTDKK 411 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 412 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 501 Score = 51.0 bits (105), Expect(3) = 2e-26 Identities = 17/61 (27%), Positives = 35/61 (57%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL G A+ WW Sbjct: 16 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLSGPAADWW 195 Query: 688 Q 690 + Sbjct: 196 E 198 Score = 33.6 bits (67), Expect(3) = 2e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 772 PSAVQCFRCNQMGHYARQC 828
>LOC_Os06g31670:12006.t02866:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3819 Score = 84.9 bits (179), Expect(2) = 2e-26 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +3 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++WDEF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 1614 GHTITWDEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 1793 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GLK++L + L L D E+F+K + ++N K+R Sbjct: 1794 DEDTQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAIQLESEHNRMKNCKRR 1946 Score = 55.6 bits (115), Expect(2) = 2e-26 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1413 LSEFLKTEPPTFAIAVDPMEASDWLRIVEKKLGLIQCTDQERVGFATPQLVGPASEWWDS 1592 Query: 694 LKDSR 708 + SR Sbjct: 1593 YEASR 1607
>LOC_Os10g24160:12010.t01841:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2975 Score = 84.5 bits (178), Expect(2) = 2e-26 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++WDEF F+ ++P+ + + +FR LKQ +V +Y EFH LA YA +DV Sbjct: 295 GHTITWDEFLAVFKRSHVPAGMITLRK*EFRYLKQEYLTVIEYLHEFHRLAHYAPEDVET 474 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + ++N K+R Sbjct: 475 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLLDKAIQLESEHNQMKNCKRR 627 Score = 56.1 bits (116), Expect(2) = 2e-26 Identities = 25/65 (38%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K+ ++ V FAT QL G AS WW Sbjct: 94 LSEFLKTGPPTFAIAVDPMEANDWLRTVEKNLGLIQCTDQERVVFATHQLVGLASEWWDS 273 Query: 694 LKDSR 708 + SR Sbjct: 274 YEVSR 288
>LOC_Os07g17700:12007.t01629:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2944 Score = 81.3 bits (171), Expect(2) = 2e-26 Identities = 37/111 (33%), Positives = 59/111 (53%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W EF F+ ++P+ + + +FR LKQ +V +Y EFH LA YA +DV Sbjct: 427 GHTITWGEFSAVFKRSHVPAGMITLRKREFRYLKQEDLTVTEYLHEFHRLAYYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELVVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 59.3 bits (123), Expect(2) = 2e-26 Identities = 26/65 (40%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAITVDPMEASDWLRTVEKKLGLIQCTDQERVVFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 K SR Sbjct: 406 YKASR 420
>LOC_Os06g37990:12006.t03494:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2879 Score = 86.3 bits (182), Expect(2) = 2e-26 Identities = 37/90 (41%), Positives = 56/90 (62%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG+NSV +Y F++LARYA ++V K Sbjct: 1865 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNNSVNEYLSLFNKLARYAPEEVDTDKK 2044 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2045 KIRKFLKGIAVGIRL*LLAHDFPTFQHMIN 2134 Score = 54.2 bits (112), Expect(2) = 2e-26 Identities = 18/61 (29%), Positives = 37/61 (60%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FLS++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1649 SKLTDFLSSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1828 Query: 688 Q 690 + Sbjct: 1829 E 1831 Score = 35.9 bits (72), Expect = 0.91 Identities = 21/63 (33%), Positives = 35/63 (55%) Frame = -1 / -2 Query: 915 ELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTK 736 EL L L+ + L+ V QLV+ VL+ + ALL++ E +N R++ +E +K Sbjct: 2059 ELPDLLLVCVHFLRGVPSQLVEQT*VLIDTVVALLKSVEFFFLHINGAFRHMSCTESRSK 1880 Query: 735 LVP 727 L+P Sbjct: 1879 LIP 1871
>LOC_Os07g11640:12007.t01037:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4589 Score = 76.2 bits (160), Expect(4) = 2e-26 Identities = 36/111 (32%), Positives = 57/111 (51%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W EF F+ +IP+ V + +FR L QGS SV +Y +F+ LARYA +DV Sbjct: 388 GEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRT 567 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GL ++L AL D +F + + +E K+R Sbjct: 568 DEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRR 720 Score = 52.8 bits (109), Expect(4) = 2e-26 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G A+ WW Sbjct: 187 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 366 Query: 694 LKDSR 708 + R Sbjct: 367 FRQGR 381 Score = 32.2 bits (64), Expect(4) = 2e-26 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +1 / +1 Query: 1258 CHKCGQKGHYANKCTSQLRL 1317 C CG GHYA+KC R+ Sbjct: 958 CFNCGDPGHYADKCPKPRRV 1017 Score = 29.9 bits (59), Expect(4) = 2e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+N+ DV++ Sbjct: 1063 ARVNHVAAAEAQNAPDVVL 1119
>LOC_Os08g04510:12008.t00345:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5960 Score = 84.9 bits (179), Expect(3) = 2e-26 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 1865 IAWDEFATAFRAAHMPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 2044 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2045 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2134 Score = 51.9 bits (107), Expect(3) = 2e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +2 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1649 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1828 Query: 688 Q 690 + Sbjct: 1829 E 1831 Score = 33.6 bits (67), Expect(3) = 2e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2405 PSAVQCFRCNQMGHYARQC 2461
>LOC_Os01g46632:12001.t04113:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3229 Score = 83.1 bits (175), Expect(3) = 2e-26 Identities = 39/108 (36%), Positives = 59/108 (54%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 2582 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARYAPEDVRNDEE 2761 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 2762 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 2905 Score = 52.4 bits (108), Expect(3) = 2e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2372 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 2551 Query: 694 LKDSR 708 + +R Sbjct: 2552 FRLNR 2566 Score = 33.1 bits (66), Expect(3) = 2e-26 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKC 1299 V C CG GHYA+KC Sbjct: 3122 VVCFNCGDPGHYADKC 3169
>LOC_Os04g14890:12004.t01306:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7945 Score = 78.0 bits (164), Expect(4) = 2e-26 Identities = 37/111 (33%), Positives = 58/111 (52%) Frame = +1 / +2 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G +++W EF F+ +IPS V + +FR L QGS SV +Y +F+ LARYA +DV Sbjct: 3707 GELITWREFTAAFKKTHIPSGVVALKKREFRALNQGSRSVIEYLHDFNLLARYAPEDVRT 3886 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GL ++L AL D +F + + +E K+R Sbjct: 3887 DEERQEKFLEGLNDELSYALMATDYRDFQQLVDKAIRQEDKYNRMEQKKRR 4039 Score = 53.3 bits (110), Expect(4) = 2e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G A+ WW Sbjct: 3506 LADFLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLIQCTKQEKVSFASHQLHGPAAEWWDH 3685 Query: 694 LKDSR 708 + +R Sbjct: 3686 FRQNR 3700 Score = 32.2 bits (64), Expect(4) = 2e-26 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +1 / +2 Query: 1258 CHKCGQKGHYANKCTSQLRL 1317 C CG GHYA+KC R+ Sbjct: 4277 CFNCGDPGHYADKCPKPRRV 4336 Score = 29.9 bits (59), Expect(4) = 2e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+N+ DV++ Sbjct: 4382 ARVNHVAAAEAQNAPDVVL 4438
>LOC_Os12g27880:12012.t02499:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3846 Score = 76.2 bits (160), Expect(4) = 2e-26 Identities = 36/111 (32%), Positives = 57/111 (51%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W EF F+ +IP+ V + +FR L QGS SV +Y +F+ LARYA +DV Sbjct: 388 GEPITWQEFMAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRT 567 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GL ++L AL D +F + + +E K+R Sbjct: 568 DEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRR 720 Score = 51.9 bits (107), Expect(4) = 2e-26 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G A+ WW Sbjct: 187 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVYFASHQLHGPAAEWWDH 366 Query: 694 LKDSR 708 + R Sbjct: 367 FRQGR 381 Score = 32.2 bits (64), Expect(4) = 2e-26 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +1 / +1 Query: 1258 CHKCGQKGHYANKCTSQLRL 1317 C CG GHYA+KC R+ Sbjct: 958 CFNCGDPGHYADKCPKPRRV 1017 Score = 29.9 bits (59), Expect(4) = 2e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+N+ DV++ Sbjct: 1063 ARVNHVAAAEAQNAPDVVL 1119
>LOC_Os04g45440:12004.t04078:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8760 Score = 85.4 bits (180), Expect(3) = 3e-26 Identities = 36/90 (40%), Positives = 56/90 (62%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 4666 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDTDKK 4845 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 4846 KIRKFLKGIAVGMRLHLLAHDFPTFQHMIN 4935 Score = 51.9 bits (107), Expect(3) = 3e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +1 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 4450 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 4629 Query: 688 Q 690 + Sbjct: 4630 E 4632 Score = 34.1 bits (68), Expect(3) = 3e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +1 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 5206 PSTVQCFRCNQTGHYARQC 5262
>LOC_Os04g05200:12004.t00402:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4419 Score = 78.0 bits (164), Expect(4) = 3e-26 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 385 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 564 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 565 RQEKFLEGLNDELSYPLMTGDYPDFQKLVDKAIRQEDKNNRMEQKKRR 708 Score = 51.0 bits (105), Expect(4) = 3e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 175 LAEFLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 354 Query: 694 LKDSR 708 + +R Sbjct: 355 FRLNR 369 Score = 33.6 bits (67), Expect(4) = 3e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 925 VVCFNCGDPGHYADKCPKPHRV 990 Score = 28.1 bits (55), Expect(4) = 3e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 1036 ARVNHVAAAEAQDAPDVIL 1092
>LOC_Os03g21350:12003.t01890:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4001 Score = 80.3 bits (169), Expect(4) = 3e-26 Identities = 39/108 (36%), Positives = 57/108 (52%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYAL+DV + Sbjct: 277 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYALEDVRTDEE 456 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 457 RQEKFLEGLNDELSYPLMTGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 600 Score = 50.1 bits (103), Expect(4) = 3e-26 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 67 LAEFLRVRPPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 246 Query: 694 LKDSR 708 + +R Sbjct: 247 SRLNR 261 Score = 34.1 bits (68), Expect(4) = 3e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 817 VVCFNCGDPGHYADKCPKPRRV 882 Score = 25.8 bits (50), Expect(4) = 3e-26 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V A EA+ + DVI+ Sbjct: 928 ARVNHVAATEAQGAPDVIL 984
>LOC_Os08g23400:12008.t02112:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4452 Score = 75.8 bits (159), Expect(4) = 3e-26 Identities = 36/111 (32%), Positives = 57/111 (51%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W EF F+ +IP+ V + +FR L QGS SV +Y +F+ LARYA +DV Sbjct: 394 GEPITWQEFTAVFKKTHIPAGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRT 573 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + + +F GL ++L AL D +F + + +E K+R Sbjct: 574 DEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRR 726 Score = 52.8 bits (109), Expect(4) = 3e-26 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + TF+S P +A DW+ + K + ++ V FA+ QL G A+ WW Sbjct: 193 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 372 Query: 694 LKDSR 708 + R Sbjct: 373 FRQGR 387 Score = 32.2 bits (64), Expect(4) = 3e-26 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +1 / +1 Query: 1258 CHKCGQKGHYANKCTSQLRL 1317 C CG GHYA+KC R+ Sbjct: 964 CFNCGDPGHYADKCPKPRRV 1023 Score = 29.9 bits (59), Expect(4) = 3e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+N+ DV++ Sbjct: 1069 ARVNHVAAAEAQNAPDVVL 1125
>LOC_Os12g28220:12012.t02532:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6817 Score = 77.6 bits (163), Expect(4) = 3e-26 Identities = 38/108 (35%), Positives = 56/108 (51%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + Sbjct: 2783 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRTDEE 2962 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 2963 RQEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNHMEQKKRR 3106 Score = 52.4 bits (108), Expect(4) = 3e-26 Identities = 21/65 (32%), Positives = 35/65 (53%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + TF+S P ++ DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2573 LAEFLRVRPPTFSSTTNPVESGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 2752 Query: 694 LKDSR 708 + +R Sbjct: 2753 FRLNR 2767 Score = 34.5 bits (69), Expect(4) = 3e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3323 VVCFNCGDPGHYADKCPKSRRV 3388 Score = 28.1 bits (55), Expect(4) = 3e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 3434 ARVNHVAAAEAQDAPDVIL 3490
>LOC_Os06g20700:12006.t01887:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4052 Score = 82.2 bits (173), Expect(2) = 3e-26 Identities = 35/111 (31%), Positives = 62/111 (55%) Frame = +1 / +3 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++WDEF F+ ++P+ + + +FR LKQ +V +Y EFH LA YA +DV + Sbjct: 3129 GHTITWDEFSSVFKRSHVPAGMITLRKREFRYLKQEDLTVTEYLHEFHRLAHYAPEDVEN 3308 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K ++ GLK+++ + L L + E+F+K + ++N K+R Sbjct: 3309 DEDKQEKYLQGLKDEIAVQLLLEEYEDFEKLVDKAIQL*SEHNRMKNCKRR 3461 Score = 57.9 bits (120), Expect(2) = 3e-26 Identities = 25/65 (38%), Positives = 34/65 (52%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF +P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 2928 LSEFLKIETPTFAIAVEPMEASDWLRTVEKKLGLIQCTDQERVVFATHQLVGLASEWWDS 3107 Query: 694 LKDSR 708 + SR Sbjct: 3108 YEASR 3122
>LOC_Os06g19330:12006.t01754:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2888 Score = 83.5 bits (176), Expect(2) = 3e-26 Identities = 37/111 (33%), Positives = 60/111 (54%) Frame = +1 / +3 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 1962 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 2141 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E F+K + + N K+R Sbjct: 2142 DEDKQEKFLQGLKDELAVQLLLEDYENFEKLVDKAMQLESEHNRMTNCKRR 2294 Score = 56.5 bits (117), Expect(2) = 3e-26 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 1761 LSEFLKTGPPTFAMAVDPMEASDWLRTIEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 1940 Query: 694 LKDSR 708 + SR Sbjct: 1941 YEASR 1955
>LOC_Os01g48520:12001.t04295:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2273 Score = 90.0 bits (190), Expect(2) = 3e-26 Identities = 37/90 (41%), Positives = 57/90 (63%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF FR+ ++P S ++ +E+F RLKQG+NSV +Y +F++LARYA ++V K Sbjct: 1848 IAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNNSVNEYLSQFNKLARYAPEEVDTDKK 2027 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2028 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2117 Score = 50.1 bits (103), Expect(2) = 3e-26 Identities = 17/61 (27%), Positives = 36/61 (59%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+++ P + +A+ QL+G A+ WW Sbjct: 1632 SKLTDFLRSRPPEFS*TVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWW 1811 Query: 688 Q 690 + Sbjct: 1812 E 1814 Score = 37.3 bits (75), Expect = 0.35 Identities = 21/63 (33%), Positives = 36/63 (57%) Frame = -1 / -1 Query: 915 ELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELLTHLLNKTGRNVVGSEVTTK 736 EL L L+ + L+ + QLV+L VL+ + ALL+ + L +N R++ +E +K Sbjct: 2042 ELPDLFLVCVHFLRGIPSQLVELT*VLIDTVVALLEPVKFLFLHINGAFRHMSCTESRSK 1863 Query: 735 LVP 727 L+P Sbjct: 1862 LIP 1854
>LOC_Os11g43090:12011.t03839:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.9 bits (179), Expect(2) = 3e-26 Identities = 38/111 (34%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF FR ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFRRSHVPTGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLGDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 55.1 bits (114), Expect(2) = 3e-26 Identities = 24/65 (36%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + + ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAVDPMEASDWLRTVERKLGLIQCTDQERVGFATHQLVGPASEWWDN 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os02g24640:12002.t02161:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1350 Score = 84.0 bits (177), Expect(2) = 3e-26 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPARMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.1 bits (116), Expect(2) = 3e-26 Identities = 24/65 (36%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V F T QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFTTHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + SR Sbjct: 406 YEASR 420
>LOC_Os12g35150:12012.t03203:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1266 Score = 86.8 bits (183), Expect(2) = 3e-26 Identities = 40/111 (36%), Positives = 59/111 (53%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G +W+EF FR ++PS + + FR LKQG +V +Y EF+ LARYA +DV Sbjct: 427 GHTTTWNEFSSVFRRSHVPSGMITLRKRAFRYLKQGDLTVTEYLHEFYRLARYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E F+K + + N K+R Sbjct: 607 DEEKQEKFLQGLKDELAVQLLLEDYENFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 53.3 bits (110), Expect(2) = 3e-26 Identities = 23/65 (35%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + + ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAVDPMEASDWLRTVERKLGLIQCTDQERVGFATHQLVGPASEWWDN 405 Query: 694 LKDSR 708 + S+ Sbjct: 406 YEASQ 420
>LOC_Os12g33980:12012.t03087:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1266 Score = 86.8 bits (183), Expect(2) = 3e-26 Identities = 40/111 (36%), Positives = 59/111 (53%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G +W+EF FR ++PS + + FR LKQG +V +Y EF+ LARYA +DV Sbjct: 427 GHTTTWNEFSSVFRRSHVPSGMITLRKRAFRYLKQGDLTVTEYLHEFYRLARYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E F+K + + N K+R Sbjct: 607 DEEKQEKFLQGLKDELAVQLLLEDYENFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 53.3 bits (110), Expect(2) = 3e-26 Identities = 23/65 (35%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL TF P +A DW+R + + ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTGPPTFAMAVDPMEASDWLRTVERKLGLIQCTDQERVGFATHQLVGPASEWWDN 405 Query: 694 LKDSR 708 + S+ Sbjct: 406 YEASQ 420
>LOC_Os04g13730:12004.t01192:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1116 Score = 84.0 bits (177), Expect(2) = 3e-26 Identities = 37/111 (33%), Positives = 61/111 (54%) Frame = +1 / +1 Query: 712 GRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPD 891 G ++W+EF F+ ++P+ + + +FR LKQG +V +Y EF+ LA YA +DV Sbjct: 427 GHTITWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFYRLAHYAPEDVET 606 Query: 892 QKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + K +F GLK++L + L L D E+F+K + + N K+R Sbjct: 607 DEDKQEKFLQGLKDELAVQLLLEDFEDFEKLVDKAMQLESEHNRMTNCKRR 759 Score = 56.1 bits (116), Expect(2) = 3e-26 Identities = 24/65 (36%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 LS+FL + TF P +A DW+R + K ++ V FAT QL G AS WW Sbjct: 226 LSEFLKTEPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDS 405 Query: 694 LKDSR 708 + S+ Sbjct: 406 YEASQ 420
>LOC_Os07g10080:12007.t00882:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7819 Score = 78.5 bits (165), Expect(4) = 3e-26 Identities = 38/108 (35%), Positives = 57/108 (52%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + + Sbjct: 3891 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEE 4070 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 4071 RQEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNRMEQKKRR 4214 Score = 52.4 bits (108), Expect(4) = 3e-26 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = +1 / +3 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + TF+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 3681 LAEFLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASPQLHGPASEWWDH 3860 Query: 694 LKDSR 708 + +R Sbjct: 3861 FRLNR 3875 Score = 34.1 bits (68), Expect(4) = 3e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +3 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 4431 VVCFNCGDPGHYADKCPKPRRV 4496 Score = 28.1 bits (55), Expect(4) = 3e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 4542 ARVNHVAAAEAQDAPDVIL 4598
>LOC_Os07g20460:12007.t01850:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7852 Score = 79.9 bits (168), Expect(4) = 3e-26 Identities = 38/108 (35%), Positives = 58/108 (53%) Frame = +1 / +1 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS V +Y EF+ LARYA +DV + + Sbjct: 385 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRFVTEYLHEFNRLARYAPEDVRNDEE 564 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GGL ++L L + D +F K + +E K+R Sbjct: 565 RQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRR 708 Score = 50.6 bits (104), Expect(4) = 3e-26 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 / +1 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L+ FL + F+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 175 LAGFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 354 Query: 694 LKDSR 708 + +R Sbjct: 355 FRLNR 369 Score = 34.1 bits (68), Expect(4) = 3e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 925 VVCFNCGDPGHYADKCPKPRRV 990 Score = 28.6 bits (56), Expect(4) = 3e-26 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 / +1 Query: 1378 ARVNMVNAAEAENSSDVIMAV 1440 ARVN V AAEA+++ DVI+ + Sbjct: 1036 ARVNHVAAAEAQDAPDVILGM 1098
>LOC_Os02g43450:12002.t03930:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7421 Score = 82.6 bits (174), Expect(3) = 3e-26 Identities = 35/90 (38%), Positives = 55/90 (61%) Frame = +1 / +3 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++WDEF F + ++P S ++ +E+F RLKQG++SV +Y F++LARYA ++V K Sbjct: 2043 IAWDEFATAFCAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAPEEVDSDKK 2222 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYN 990 KI +F G+ ++L L HD F N Sbjct: 2223 KIRKFLKGIAVGMRLQLLAHDFPTFQHMIN 2312 Score = 54.2 bits (112), Expect(3) = 3e-26 Identities = 18/61 (29%), Positives = 36/61 (59%) Frame = +1 / +3 Query: 508 ASLSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWW 687 + L+ FL ++ F+ +P +A+DW++D+N+ P + +A+ QL+G A+ WW Sbjct: 1827 SKLTDFLRSRPPEFSQTVEPVEADDWLKDVNRKLNLVQCTPVEKTLYASHQLRGPAADWW 2006 Query: 688 Q 690 + Sbjct: 2007 E 2009 Score = 33.6 bits (67), Expect(3) = 3e-26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 / +3 Query: 1243 PADVTCHKCGQKGHYANKC 1299 P+ V C +C Q GHYA +C Sbjct: 2583 PSAVQCFRCNQMGHYARQC 2639
>LOC_Os11g26540:12011.t02270:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5357 Score = 75.3 bits (158), Expect(4) = 4e-26 Identities = 37/108 (34%), Positives = 56/108 (51%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR +IPS V +++FR L QGS SV +Y EF+ LARYA +DV + Sbjct: 2777 ITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRTDEE 2956 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K++ Sbjct: 2957 RQEKFLEGLNDELSYPLMTGDYPDFQKLVDKAIRQEDKYNRMEQKKRQ 3100 Score = 53.8 bits (111), Expect(4) = 4e-26 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + TF+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2567 LAEFLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 2746 Query: 694 LKDSR 708 + +R Sbjct: 2747 FRLNR 2761 Score = 34.1 bits (68), Expect(4) = 4e-26 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 1252 VTCHKCGQKGHYANKCTSQLRL 1317 V C CG GHYA+KC R+ Sbjct: 3317 VVCFNCGDPGHYADKCPKPRRV 3382 Score = 28.1 bits (55), Expect(4) = 4e-26 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIM 1434 ARVN V AAEA+++ DVI+ Sbjct: 3428 ARVNHVAAAEAQDAPDVIL 3484
>LOC_Os03g39450:12003.t03379:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5379 Score = 79.4 bits (167), Expect(4) = 4e-26 Identities = 38/108 (35%), Positives = 56/108 (51%) Frame = +1 / +2 Query: 721 MSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGSNSVYKYNVEFHELARYALQDVPDQKS 900 ++W EF FR ++PS V +++FR L QGS SV KY EF+ LARYA +DV + Sbjct: 2795 ITWLEFTAAFRKTHVPSRVVSLKKKEFRALTQGSRSVTKYMHEFNRLARYAPEDVCTDEE 2974 Query: 901 KIYQFRGGLKEDLQLALALHDPEEFDKFYNXXXXXXXXXXXVENSKKR 1044 + +F GL ++L L D +F K + +E K+R Sbjct: 2975 RQEKFLEGLNDELSYPLMTRDYSDFQKLVDKAIRQEDKYNRMEQKKRR 3118 Score = 51.9 bits (107), Expect(4) = 4e-26 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = +1 / +2 Query: 514 LSQFLSNQLRTFTSCDQPFDAEDWIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQ 693 L++FL + TF+S P +A DW+ + K + ++ V FA+ QL G AS WW Sbjct: 2585 LAEFLRVRPPTFSSTTNPVEAGDWLHVIEKKLDLLQGTNQEKVSFASHQLHGPASKWWDH 2764 Query: 694 LKDSR 708 + +R Sbjct: 2765 FRLNR 2779 Score = 31.8 bits (63), Expect(4) = 4e-26 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 / +2 Query: 1258 CHKCGQKGHYANKCTSQLRL 1317 C CG+ GHY++KC R+ Sbjct: 3341 CFNCGEAGHYSDKCPKPRRV 3400 Score = 28.1 bits (55), Expect(4) = 4e-26 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = +1 / +2 Query: 1378 ARVNMVNAAEAENSSDVIMAV 1440 ARVN V AAEA+ + DVI+ + Sbjct: 3446 ARVNHVAAAEAQGAPDVILGM 3508 Score = 37.3 bits (75), Expect = 0.35 Identities = 16/49 (32%), Positives = 30/49 (61%) Frame = -1 / -3 Query: 939 QILLQATPELVYLTLLIRNILQRVTGQLVKLNIVLVHRIAALLQAPELL 793 ++++Q+ EL+ + +IL+ +TGQ ++ VL R +L + PELL Sbjct: 3013 KLIIQSFQELLLTLFICAHILRSITGQTIEFMHVLGDRTGSLSERPELL 2867 Score = 29.5 bits (58), Expect(2) = 1.7 Identities = 18/41 (43%), Positives = 22/41 (53%) Frame = -2 / -1 Query: 842 LYLYTELLPCFKRLNFSRISSTKLEGM*WDLKSRQNSSQDI 720 +YL TE P LN + T L+G * LK+ NSSQ I Sbjct: 2916 MYLVTERDP*VSALNSFFLRDTTLDGT*VFLKAAVNSSQVI 2794 Score = 22.6 bits (43), Expect(2) = 1.7 Identities = 10/23 (43%), Positives = 10/23 (43%) Frame = -3 / -2 Query: 883 HPATRNGPARETQHCTCTQNCCP 815 HP NGP CT QN P Sbjct: 2957 HPPEHNGPDD*IHACTW*QNGIP 2889 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 629,749,779 Number of extensions: 9248628 Number of successful extensions: 48512 Number of sequences better than 10.0: 1621 Length of query: 600 Length of database: 55,613,886 Length adjustment: 51 Effective length of query: 549 Effective length of database: 52,743,708 Effective search space: 28956295692 Effective search space used: 28956295692 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
