ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf90i13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK064492:Os02g0186700 182 3e-46
2AK110646:Os03g0231300 30 2.7
3Os06g0504100:Os06g0504100 29 4.5
4AK110674:Os09g0272200 29 4.5
5AK112107:Os02g0796700 28 7.7
6AK105939:Os05g0322900 28 7.7

>AK064492:Os02g0186700 |
          Length = 200
 Score =  182 bits (461), Expect = 3e-46
 Identities = 107/186 (57%), Positives = 122/186 (65%), Gaps = 11/186 (5%)
 Frame = +2

Query: 65  MDSGSESDGAPEELTAVQGVEKHEEISKVEKDSAVRATQEEKDRRKRWAQRXXXXXXXXX 244
           MDSGSESD APEELTAVQGVEKH+EISKVEKDSA+R +Q+EK+RR+RWAQR         
Sbjct: 15  MDSGSESDSAPEELTAVQGVEKHDEISKVEKDSAIRVSQQEKERRRRWAQRRTSSKPDKK 74

Query: 245 XXXXXXXXXXXXXXXXR---------AMPGTLPKSVIEMLAAREKQTFTSDSEEENVSQX 397
                                      MPG LP +VIEMLAAREKQTF+SDSEEE  +Q 
Sbjct: 75  EPLEVEDKDIKQKAENEEDEESEETHTMPGMLPTNVIEMLAAREKQTFSSDSEEEITNQK 134

Query: 398 XXXXXXXXXTTITGPETILLKDVRSTEHIKKALEFLNHRKNQVPRSNAVLKN-RSAMRLF 574
                    ++  GPETILLKDVRST+H+K AL FL  RKNQVPRSNAVLKN   A+RL 
Sbjct: 135 VQKRKKRLKSS--GPETILLKDVRSTQHVKNALAFLEQRKNQVPRSNAVLKNANKALRLL 192

Query: 575 -NKPNF 589
            +K NF
Sbjct: 193 SSKGNF 198



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>AK110646:Os03g0231300 |
          Length = 256

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
 Frame = +1

Query: 1   GRRRRQ-PPHREELPPATSQLTNGQRKRVRRRP*GAH----CRPGCRE---T*RNQQSRE 156
           GRRRRQ   HR  LPP++ +   G  +R  RR    H        CR    + R  ++RE
Sbjct: 106 GRRRRQIRRHRCSLPPSSPRRGEGSSRRAPRRQIRRHRYSPPPSSCRREEGSSRRARARE 165

Query: 157 GQCCQSNPGGE 189
           G+     P  E
Sbjct: 166 GRGAAGEPAPE 176



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>Os06g0504100:Os06g0504100 |
          Length = 290

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 7/43 (16%)
 Frame = +1

Query: 4   RRRRQPP-------HREELPPATSQLTNGQRKRVRRRP*GAHC 111
           RRRR+PP        R   P    +    +R+R RRRP GA C
Sbjct: 160 RRRRRPPLRPAPRRRRRPRPRGRRRRRRRRRRRRRRRPRGAGC 202



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>AK110674:Os09g0272200 |
          Length = 126

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +1

Query: 4   RRRRQPPHREELPPATSQLTNGQRKRVRRRP*GAHCRP 117
           RRRR+P  R   P        G+R+R RRRP GA   P
Sbjct: 68  RRRRRPGSRSGEP--------GRRRRARRRPGGAGADP 97



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>AK112107:Os02g0796700 |
          Length = 527

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -3

Query: 213 WAQRFLRSFSSWVALTALSFSTLLISSCFSTPWTAVSSSGAP 88
           W  RFL   +SW  L A     L +   F  P  ++SSSG P
Sbjct: 298 WDNRFLLPVNSWKYLPATPIEKLCL---FIPPPNSISSSGRP 336



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>AK105939:Os05g0322900 |
          Length = 245

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
 Frame = +1

Query: 1   GRRRRQPPHREELPPATSQLTNGQRKRVRRRP*GA---HCRPGCRET*RNQQSREGQCCQ 171
           GR  R+P     LP        G  +R RRR  GA   H R       R Q+ RE +  +
Sbjct: 53  GRPLRRPDSPHLLPGDAGARQGGGLRRRRRRVGGAERGHLRG------RGQRRREEESPR 106

Query: 172 SNPGGERPEE 201
             P G+ P+E
Sbjct: 107 RRPEGQLPQE 116


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 21,847,792
Number of extensions: 454583
Number of successful extensions: 1490
Number of sequences better than 10.0: 6
Number of HSP's gapped: 1487
Number of HSP's successfully gapped: 6
Length of query: 275
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 176
Effective length of database: 11,435,796
Effective search space: 2012700096
Effective search space used: 2012700096
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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