Clone Name | FLbaf90i13 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK064492:Os02g0186700 | 182 | 3e-46 | 2 | AK110646:Os03g0231300 | 30 | 2.7 | 3 | Os06g0504100:Os06g0504100 | 29 | 4.5 | 4 | AK110674:Os09g0272200 | 29 | 4.5 | 5 | AK112107:Os02g0796700 | 28 | 7.7 | 6 | AK105939:Os05g0322900 | 28 | 7.7 |
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>AK064492:Os02g0186700 | Length = 200 Score = 182 bits (461), Expect = 3e-46 Identities = 107/186 (57%), Positives = 122/186 (65%), Gaps = 11/186 (5%) Frame = +2 Query: 65 MDSGSESDGAPEELTAVQGVEKHEEISKVEKDSAVRATQEEKDRRKRWAQRXXXXXXXXX 244 MDSGSESD APEELTAVQGVEKH+EISKVEKDSA+R +Q+EK+RR+RWAQR Sbjct: 15 MDSGSESDSAPEELTAVQGVEKHDEISKVEKDSAIRVSQQEKERRRRWAQRRTSSKPDKK 74 Query: 245 XXXXXXXXXXXXXXXXR---------AMPGTLPKSVIEMLAAREKQTFTSDSEEENVSQX 397 MPG LP +VIEMLAAREKQTF+SDSEEE +Q Sbjct: 75 EPLEVEDKDIKQKAENEEDEESEETHTMPGMLPTNVIEMLAAREKQTFSSDSEEEITNQK 134 Query: 398 XXXXXXXXXTTITGPETILLKDVRSTEHIKKALEFLNHRKNQVPRSNAVLKN-RSAMRLF 574 ++ GPETILLKDVRST+H+K AL FL RKNQVPRSNAVLKN A+RL Sbjct: 135 VQKRKKRLKSS--GPETILLKDVRSTQHVKNALAFLEQRKNQVPRSNAVLKNANKALRLL 192 Query: 575 -NKPNF 589 +K NF Sbjct: 193 SSKGNF 198
>AK110646:Os03g0231300 | Length = 256 Score = 29.6 bits (65), Expect = 2.7 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 8/71 (11%) Frame = +1 Query: 1 GRRRRQ-PPHREELPPATSQLTNGQRKRVRRRP*GAH----CRPGCRE---T*RNQQSRE 156 GRRRRQ HR LPP++ + G +R RR H CR + R ++RE Sbjct: 106 GRRRRQIRRHRCSLPPSSPRRGEGSSRRAPRRQIRRHRYSPPPSSCRREEGSSRRARARE 165 Query: 157 GQCCQSNPGGE 189 G+ P E Sbjct: 166 GRGAAGEPAPE 176
>Os06g0504100:Os06g0504100 | Length = 290 Score = 28.9 bits (63), Expect = 4.5 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 7/43 (16%) Frame = +1 Query: 4 RRRRQPP-------HREELPPATSQLTNGQRKRVRRRP*GAHC 111 RRRR+PP R P + +R+R RRRP GA C Sbjct: 160 RRRRRPPLRPAPRRRRRPRPRGRRRRRRRRRRRRRRRPRGAGC 202
>AK110674:Os09g0272200 | Length = 126 Score = 28.9 bits (63), Expect = 4.5 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = +1 Query: 4 RRRRQPPHREELPPATSQLTNGQRKRVRRRP*GAHCRP 117 RRRR+P R P G+R+R RRRP GA P Sbjct: 68 RRRRRPGSRSGEP--------GRRRRARRRPGGAGADP 97
>AK112107:Os02g0796700 | Length = 527 Score = 28.1 bits (61), Expect = 7.7 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = -3 Query: 213 WAQRFLRSFSSWVALTALSFSTLLISSCFSTPWTAVSSSGAP 88 W RFL +SW L A L + F P ++SSSG P Sbjct: 298 WDNRFLLPVNSWKYLPATPIEKLCL---FIPPPNSISSSGRP 336
>AK105939:Os05g0322900 | Length = 245 Score = 28.1 bits (61), Expect = 7.7 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Frame = +1 Query: 1 GRRRRQPPHREELPPATSQLTNGQRKRVRRRP*GA---HCRPGCRET*RNQQSREGQCCQ 171 GR R+P LP G +R RRR GA H R R Q+ RE + + Sbjct: 53 GRPLRRPDSPHLLPGDAGARQGGGLRRRRRRVGGAERGHLRG------RGQRRREEESPR 106 Query: 172 SNPGGERPEE 201 P G+ P+E Sbjct: 107 RRPEGQLPQE 116 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 21,847,792 Number of extensions: 454583 Number of successful extensions: 1490 Number of sequences better than 10.0: 6 Number of HSP's gapped: 1487 Number of HSP's successfully gapped: 6 Length of query: 275 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 176 Effective length of database: 11,435,796 Effective search space: 2012700096 Effective search space used: 2012700096 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)