ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf93i11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103897:Os05g0120100 | 31 | 2.6 | 2 | AK060437:Os05g0120100 | 31 | 2.6 | 3 | Os05g0153900:Os05g0153900 | 31 | 2.6 | 4 | Os12g0407900:Os12g0407900 | 30 | 3.4 | 5 | Os12g0288300:Os12g0288300 | 30 | 4.5 | 6 | AK102136:Os06g0703500 | 30 | 5.8 | 7 | AK073179:Os06g0703500 | 30 | 5.8 | 8 | AK066107:Os01g0339500 | 30 | 5.8 | 9 | AK061641:Os06g0703500 | 30 | 5.8 | 10 | AK107971:Os05g0237300 | 29 | 7.6 | 11 | Os01g0782800:Os01g0782800 | 29 | 7.7 |
|---|
>AK103897:Os05g0120100 | Length = 323 Score = 30.8 bits (68), Expect = 2.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 83 CQRLHQQLQFATAHCCSPKPVRDGGARRWCSSTSARAAVACRSCLRATAAHPR 241 CQ + L+ ++ CSP P R G R S + +R+ RS R+ + PR Sbjct: 139 CQNSPRNLRRERSYSCSPSPRRGRGRSRSYSRSRSRSRSYSRSRSRSLSGSPR 191
>AK060437:Os05g0120100 | Length = 311 Score = 30.8 bits (68), Expect = 2.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 83 CQRLHQQLQFATAHCCSPKPVRDGGARRWCSSTSARAAVACRSCLRATAAHPR 241 CQ + L+ ++ CSP P R G R S + +R+ RS R+ + PR Sbjct: 127 CQNSPRNLRRERSYSCSPSPRRGRGRSRSYSRSRSRSRSYSRSRSRSLSGSPR 179
>Os05g0153900:Os05g0153900 | Length = 824 Score = 30.8 bits (68), Expect = 2.6 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -1 Query: 753 RMSTTAATKKLTPKRKLQI 697 RM T AA KK+TPKRKL I Sbjct: 805 RMPTAAAPKKMTPKRKLHI 823
>Os12g0407900:Os12g0407900 | Length = 459 Score = 30.4 bits (67), Expect = 3.4 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = +1 Query: 79 SLPTPAPATAVRHRPLLLT*ACARRRSSPLVLVHICTSRRSLP 207 ++P P PA+AV PLLL RRR + H+ +RR LP Sbjct: 45 AVPDPLPASAVAAVPLLL-----RRRPHVALSFHLFATRRLLP 82
>Os12g0288300:Os12g0288300 | Length = 142 Score = 30.0 bits (66), Expect = 4.5 Identities = 20/48 (41%), Positives = 25/48 (52%) Frame = -2 Query: 155 RRRAQA*VSNSGRWRTAVAGAGVGKLRRRAAMPQTGMLATATGFGGER 12 RR A++ + GR R A AG +L RRAA + L GFGG R Sbjct: 21 RRPAESGATRGGRRRAAAAG----RLARRAATGEGSGLDCRDGFGGWR 64
>AK102136:Os06g0703500 | Length = 475 Score = 29.6 bits (65), Expect = 5.8 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Frame = +2 Query: 47 CQFEASPLAAVACQRLHQQLQFATAHCCSPKPVRDGGARRWCSSTSARAAVA-----CRS 211 CQ E + + + H++ + AH +PK + G RR+C S +A +S Sbjct: 180 CQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKS 239 Query: 212 CLRATAAH 235 C R + H Sbjct: 240 CRRRLSDH 247
>AK073179:Os06g0703500 | Length = 475 Score = 29.6 bits (65), Expect = 5.8 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Frame = +2 Query: 47 CQFEASPLAAVACQRLHQQLQFATAHCCSPKPVRDGGARRWCSSTSARAAVA-----CRS 211 CQ E + + + H++ + AH +PK + G RR+C S +A +S Sbjct: 180 CQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKS 239 Query: 212 CLRATAAH 235 C R + H Sbjct: 240 CRRRLSDH 247
>AK066107:Os01g0339500 | Length = 460 Score = 29.6 bits (65), Expect = 5.8 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 Query: 155 GARRWCSSTSARAAVACRSCLRATAAHPRMYASA 256 G RRWC ST AR A CL A + PR ++S+ Sbjct: 10 GRRRWCPST-ARTGTA---CLSAATSSPRTWSSS 39
>AK061641:Os06g0703500 | Length = 455 Score = 29.6 bits (65), Expect = 5.8 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Frame = +2 Query: 47 CQFEASPLAAVACQRLHQQLQFATAHCCSPKPVRDGGARRWCSSTSARAAVA-----CRS 211 CQ E + + + H++ + AH +PK + G RR+C S +A +S Sbjct: 160 CQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKS 219 Query: 212 CLRATAAH 235 C R + H Sbjct: 220 CRRRLSDH 227
>AK107971:Os05g0237300 | Length = 97 Score = 29.3 bits (64), Expect = 7.6 Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Frame = +2 Query: 149 DGGARRW--CSSTSARAAVACRSCLRATAAHPRMYASAAHRVTC*RGEAGTC 298 DGGARRW S ARA VA R R AA A R R G C Sbjct: 36 DGGARRWLPLCSGGARAEVAGRRRRRLAAAEASTVVEALRRPAA-RVRPGVC 86
>Os01g0782800:Os01g0782800 | Length = 396 Score = 29.3 bits (64), Expect = 7.7 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 5/35 (14%) Frame = -1 Query: 174 EHQRRAPPSRTGLGEQQWAVA-----NCSCWCRRW 85 E Q R PP + G G+++WA A W R W Sbjct: 24 EEQERKPPPKRGGGKRRWAWAPLEPRRAGWWAREW 58 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 40,781,859 Number of extensions: 932525 Number of successful extensions: 3112 Number of sequences better than 10.0: 11 Number of HSP's gapped: 3109 Number of HSP's successfully gapped: 11 Length of query: 501 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 396 Effective length of database: 11,195,550 Effective search space: 4433437800 Effective search space used: 4433437800 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
