ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf93i11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ102384.2| Hordeum vulgare root abundant factor (RAF) gene, promoter region and complete cds Length = 3958 Score = 1178 bits (594), Expect = 0.0 Identities = 779/841 (92%), Gaps = 16/841 (1%) Strand = Plus / Minus Query: 626 taacgaagggagtattcaacttcctcaaataactatagcatcaatttcgtagagatcgtt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1783 taacgaagggagtattcaacttcctcaaataactatagcatcaatttcgtagagatcgtt 1724 Query: 686 catccaattttaatttgtagcttcctctttggagtcaacttctttgttgcagctgtagtg 745 |||||||||| ||||| |||||| || |||||||||||||||||||||| |||||||||| Sbjct: 1723 catccaatttcaatttttagctttctttttggagtcaacttctttgttggagctgtagtg 1664 Query: 746 gacatcctctgtagttgttgtta---cttgtgaagacgtgtcctctcccaacaagaaagc 802 |||||||||||||||||||||| |||||||||| || |||||||||||||||||||| Sbjct: 1663 gacatcctctgtagttgttgttgttgcttgtgaagatgtatcctctcccaacaagaaagc 1604 Query: 803 aaggcgtccgcatgtatgtgtgttatacaatgaaatgaatgtgttgcttctcattttcat 862 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1603 aaggcgtctgcatgtatgtgtgttatacaatgaaatgaacacgttgcttctcattttcat 1544 Query: 863 attgttgagcatatattcagaagattcgctacagtttgcctgaatgtaatgcggtatcaa 922 |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1543 attgttgaacatatattcagaagattcgctacagtttgcctgaatgtaatgtggtatcaa 1484 Query: 923 tggcatgtacataacaccatcaaggtagaacaaatcatcaagttgtaggagagcatgaca 982 || |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1483 tgacatgtacataacaccaccaaggtagaacaaatcatcaagttgtaggagaacatgaca 1424 Query: 983 tcattctaaatgaaccatgcagaatagaatttacatattctaaaatttcccttgtatact 1042 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1423 tcattctaaatgaaccatgcagaatagaatttacatattctaaaatttcccttgtatact 1364 Query: 1043 tctactagttgtctctgatgtgcaggttaacacaagtaatgacatattcgaaggtataga 1102 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1363 tctactagttgtctctgatgtgcaggttaacacaagtaatggcatattcgaaggtacaga 1304 Query: 1103 tagaagaatactgtgtagaaggattgggttccattccgccgctgcggtacctagagatcg 1162 |||||||||||||||||||||||||| |||||||| || ||||| ||||||||||| | Sbjct: 1303 tagaagaatactgtgtagaaggattgagttccatt---ccactgcgatacctagagatag 1247 Query: 1163 atggcgcagagtgtagataagaggcgc----------ggcgtctaggcaatctgtgacac 1212 ||| |||||||||| |||||||||||| |||||| |||||| ||||||||| Sbjct: 1246 atgacgcagagtgtcgataagaggcgcgtgggcgcatggcgtccaggcaacctgtgacac 1187 Query: 1213 gcgatgtccaaccaatcggcaacccacttccaagcaatcgacaagcaggagtagccctac 1272 |||||||||| |||||||||| |||||||||||||||||| |||||||||| |||||||| Sbjct: 1186 gcgatgtccagccaatcggcagcccacttccaagcaatcggcaagcaggagcagccctac 1127 Query: 1273 aatgtgcaggtagaagagctgatggatcatgggggaggaccggaggagggcttggcaaac 1332 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1126 aatgtgcaggtagaagagctgatggatcatgggggaggaccagaggagggcttggcgaac 1067 Query: 1333 tatgtgcggtgatctaggccggcagcgcgcgctgaacgacgttgtttcaagttggatgca 1392 | | ||||||||||| ||||| | ||| ||||| |||| ||||||||||||||||||||| Sbjct: 1066 tgtatgcggtgatctcggccgacggcgggcgctcaacggcgttgtttcaagttggatgca 1007 Query: 1393 aaaaactagtacgtgtgcatatgctaggggtattttggtcccttcagatgctaggaaatg 1452 |||||||||||| |||||||| ||||||||||| |||||||||||||||| | ||||||| Sbjct: 1006 aaaaactagtacatgtgcataggctaggggtatattggtcccttcagatgttgggaaatg 947 Query: 1453 g 1453 | Sbjct: 946 g 946 Score = 456 bits (230), Expect = e-124 Identities = 305/328 (92%), Gaps = 4/328 (1%) Strand = Plus / Minus Query: 4 gaggtgcttcgttctccaccaaagcccgtcgccgtagctagc--atgccagtttgaggca 61 |||||| |||||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 2107 gaggtgtttcgttctccaccaaagcccgtcgccgtagctcgctgatgccagtgcgaggca 2048 Query: 62 tcgccgctcgccgccgtagcttgccaacgcctgcaccagcaactgcagttcgccaccgcc 121 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2047 tcgcagctcgccgccctagcttgccaacgcctgcaccagcaactgcagttcgccaccacc 1988 Query: 122 cactgttgctcacctaagcctgtgcgcgacggcggagctcgccgctggtgctcgtccaca 181 ||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1987 caccgttgctcacccaagcctgtgcgcgacggcggagctcgccgttggtgctcgtccaca 1928 Query: 182 tctgcacgagccgccg--tagcttgccggtcatgcctgcgagcaaccgcagctcacccgc 239 | ||||||||||| || ||||||||||| |||||| |||||||||||||||||| ||| Sbjct: 1927 tttgcacgagccgtcgtatagcttgccggccatgcccgcgagcaaccgcagctcatccgt 1868 Query: 240 gcatgtacgctagcgcagctcaccgtgtgacatgctagagaggtgaggcaggaacatgca 299 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1867 gcatgtgcgctagcgcagctcgtcgtgtgacatgctagagaggtgaggcaggaacatgca 1808 Query: 300 ggtaacctagatgttcaagtttattaac 327 |||||||||||||||||||||||||||| Sbjct: 1807 ggtaacctagatgttcaagtttattaac 1780 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1418 aggggtattttggtcccttcagatgctaggaaatgg 1453 |||||||||||||||||||||| ||| ||||||||| Sbjct: 2155 aggggtattttggtcccttcaggtgccaggaaatgg 2190
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 101 bits (51), Expect = 7e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 557 ctctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagact 616 |||||| |||||||||||||||| |||||||||||| || ||||| ||||||||||||| Sbjct: 197572 ctctaaagtatgtctatatacatccgtatgtagtttaataatgaaacctctaaaaagact 197631 Query: 617 tataattagtaacgaagggagta 639 |||| |||| ||||||||||||| Sbjct: 197632 tatatttagaaacgaagggagta 197654 Score = 81.8 bits (41), Expect = 7e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| |||||||||||||||||||||||| || ||| ||||| || ||||||||| Sbjct: 30357 actctaaaatatgtctatatacattcgtatgtaattcactaatgaaacctgtaaaaagac 30298 Query: 616 ttataattagtaacgaagggagtat 640 ||||| |||| |||| ||||||||| Sbjct: 30297 ttatatttagaaacggagggagtat 30273 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaatctttctaaagattctacta 548 |||||||||| ||||||||||||||||||| || ||||| ||||| Sbjct: 208503 tactccctccgtttctaaatataaatctttttagagattttacta 208459 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 593 tctagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 |||||| ||| |||| |||||||||||| ||||||||| |||||||| Sbjct: 143685 tctagtaaaatctcttaaaagacttatatttagtaacggagggagta 143731 Score = 48.1 bits (24), Expect = 0.093 Identities = 45/52 (86%) Strand = Plus / Minus Query: 565 tatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagact 616 |||||||||||| | || |||||||| ||||||||||| |||| ||||||| Sbjct: 208414 tatgtctatatataatcatatgtagtcttctagtgaaacctcttcaaagact 208363 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaatcttt 533 |||||||||| ||||||||||||| ||||| Sbjct: 30274 tactccctccgtttctaaatataagtcttt 30303 Score = 44.1 bits (22), Expect = 1.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagtat 640 |||| ||| ||||||||||| ||||| |||| |||| ||||||||| Sbjct: 208459 tagtaaaatctctaaaaagatttatatttagaaacggagggagtat 208504 Score = 42.1 bits (21), Expect = 5.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 493 cttgtagcttgtactccctccatttctaaatataaatcttt 533 |||||| ||| |||||||| | ||||||||||||| ||||| Sbjct: 197665 cttgtatcttctactcccttcgtttctaaatataagtcttt 197625
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 95.6 bits (48), Expect = 4e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 553 tatactctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaa 612 |||||||||| |||||||||||||||| |||||||||| ||||||||| ||||| ||| Sbjct: 14576 tatactctaaagtatgtctatatacatccgtatgtagtccactagtgaaatctctacaaa 14517 Query: 613 gacttataattagtaacgaagggagtat 640 |||||||| |||| |||| ||||||||| Sbjct: 14516 gacttatatttaggaacggagggagtat 14489 Score = 93.7 bits (47), Expect = 2e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 553 tatactctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaa 612 |||||||||| |||||||||||||||| |||||||||| ||||||||| ||||| ||| Sbjct: 89220 tatactctaaagtatgtctatatacatccgtatgtagtccactagtgaaatctctagaaa 89279 Query: 613 gacttataattagtaacgaagggagta 639 |||||||| |||| |||| |||||||| Sbjct: 89280 gacttatatttaggaacggagggagta 89306 Score = 56.0 bits (28), Expect = 4e-04 Identities = 74/88 (84%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 553 tatactctaatgtatgtctatatacattcgtatgtagttt-tctagtgaaagctctaaaa 611 |||||| ||| ||||| |||||||||| |||||||||| | |||||||| |||| ||| Sbjct: 81213 tatactttaaagtatgcctatatacatccgtatgtagtccatttagtgaaacctcttaaa 81272 Query: 612 agacttataattagtaacgaagggagta 639 ||||||||| |||| |||| ||| |||| Sbjct: 81273 agacttatatttaggaacggaggaagta 81300 Score = 48.1 bits (24), Expect = 0.093 Identities = 33/36 (91%) Strand = Plus / Minus Query: 605 tctaaaaagacttataattagtaacgaagggagtat 640 |||||||||||||||| |||| |||| ||||||||| Sbjct: 81170 tctaaaaagacttatatttaggaacggagggagtat 81135 Score = 48.1 bits (24), Expect = 0.093 Identities = 36/40 (90%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataaatctttctaaagatt 542 ||||||||||| || |||||||||| |||||||| ||||| Sbjct: 89307 gtactccctccgttcctaaatataagtctttctagagatt 89268 Score = 46.1 bits (23), Expect = 0.37 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 565 tatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatta 624 |||| ||| |||||| ||||||||| ||| |||||| | |||||||| | |||||| ||| Sbjct: 66679 tatgactacatacatccgtatgtag-tttatagtgagatctctaaaaggtcttatattta 66621 Query: 625 gtaacgaagggagta 639 | |||| |||||||| Sbjct: 66620 ggaacggagggagta 66606 Score = 44.1 bits (22), Expect = 1.4 Identities = 40/46 (86%) Strand = Plus / Minus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagtat 640 |||||||| | || |||||||||||| |||| |||| ||||||||| Sbjct: 89187 tagtgaaatcgcttaaaagacttatatttaggaacggagggagtat 89142 Score = 42.1 bits (21), Expect = 5.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 599 gaaagctctaaaaagacttataattagtaacgaagggagta 639 |||| ||||||||||||||||| |||| |||| || ||||| Sbjct: 83505 gaaatctctaaaaagacttatatttaggaacggagagagta 83465
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 87.7 bits (44), Expect = 1e-13 Identities = 74/84 (88%) Strand = Plus / Plus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| |||||||||||||||| |||||||||| ||||||||| ||||||||||| Sbjct: 52391 actctaaagtatgtctatatacatccgtatgtagtcccctagtgaaacatctaaaaagac 52450 Query: 616 ttataattagtaacgaagggagta 639 ||||| |||| |||| |||||||| Sbjct: 52451 ttatatttaggaacggagggagta 52474 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 572 atatacattcgtatgtagttttctagtgaaagctctaaaaagacttataattagtaacga 631 |||||||| ||||||||| ||| || ||||| ||||||||||||||||| |||| |||| Sbjct: 57411 atatacatccgtatgtagatttttaatgaaacctctaaaaagacttatatttaggaacgg 57352 Query: 632 agggagtat 640 ||||||||| Sbjct: 57351 agggagtat 57343
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 87.7 bits (44), Expect = 1e-13 Identities = 68/76 (89%) Strand = Plus / Plus Query: 564 gtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatt 623 |||||||||||||||| |||||||||| |||||||||| ||||||||||||||||| || Sbjct: 47368 gtatgtctatatacatctgtatgtagttctctagtgaaacctctaaaaagacttatattt 47427 Query: 624 agtaacgaagggagta 639 | |||| |||||||| Sbjct: 47428 acgaacggagggagta 47443 Score = 50.1 bits (25), Expect = 0.023 Identities = 40/45 (88%) Strand = Plus / Minus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 |||||||| |||| |||||||||||| |||| |||| |||||||| Sbjct: 47324 tagtgaaatctcttaaaagacttatatttaggaacggagggagta 47280
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 85.7 bits (43), Expect = 4e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 565 tatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatta 624 ||||||||||||||| || ||||||| | ||||||||| ||||||||||||||||| ||| Sbjct: 76886 tatgtctatatacatccgaatgtagtctactagtgaaacctctaaaaagacttatattta 76827 Query: 625 gtaacgaagggagta 639 | |||| |||||||| Sbjct: 76826 ggaacggagggagta 76812 Score = 71.9 bits (36), Expect = 6e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| ||||||||||| ||| | ||||||||| ||||| ||| |||||||||||| Sbjct: 29917 actctaaaatatgtctatatgcatccatatgtagttcactagtaaaacctctaaaaagac 29858 Query: 616 ttataattagtaacgaagggagta 639 ||||| |||| |||| |||||||| Sbjct: 29857 ttatatttagaaacggagggagta 29834 Score = 61.9 bits (31), Expect = 6e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 581 cgtatgtagttttctagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 |||||||||| ||||| |||| ||||||||||||||||| |||| |||| |||||||| Sbjct: 76917 cgtatgtagtcgtctagcgaaatctctaaaaagacttatatttaggaacggagggagta 76975 Score = 44.1 bits (22), Expect = 1.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaatataaatctttctaaagattctacta 548 ||||||||||| ||||||||||||| | || |||||||| ||||| Sbjct: 23050 gtactccctccgtttctaaatataagaccttttaaagattgtacta 23095 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaatcttt 533 |||||||||| ||||||||||||| ||||| Sbjct: 29834 tactccctccgtttctaaatataagtcttt 29863 Score = 42.1 bits (21), Expect = 5.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 552 atatactctaatgtatgtctatatacattcgtatgtagttt 592 ||||||| ||| ||||||||| ||||| |||||||||||| Sbjct: 23137 atatactttaaaatatgtctatgtacatccgtatgtagttt 23097
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 81.8 bits (41), Expect = 7e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 565 tatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatta 624 ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||| | Sbjct: 12758 tatgtctatatacatccgtatgtagtcctctagtgaaatctctaaaaagacttatattat 12817 Query: 625 gtaacgaagggagtatt 641 | |||| |||||||||| Sbjct: 12818 ggaacggagggagtatt 12834 Score = 46.1 bits (23), Expect = 0.37 Identities = 50/59 (84%) Strand = Plus / Minus Query: 581 cgtatgtagttttctagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 |||||||||| | |||||||| | || |||||||||||| |||| |||| |||||||| Sbjct: 12727 cgtatgtagtctcttagtgaaatcgcttaaaagacttatatttaggaacggagggagta 12669
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 565 tatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatta 624 ||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 71780 tatgtctatatacatccgtatgtagttcaatagtgaaatctctagaaagacttatattta 71839 Query: 625 gtaacgaagggagta 639 | |||| |||||||| Sbjct: 71840 ggaacggagggagta 71854 Score = 67.9 bits (34), Expect = 1e-07 Identities = 61/70 (87%) Strand = Plus / Plus Query: 570 ctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataattagtaac 629 |||||||||| |||||||||| ||||||||| ||||| ||||||||||| |||| ||| Sbjct: 90825 ctatatacatccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaac 90884 Query: 630 gaagggagta 639 | |||||||| Sbjct: 90885 ggagggagta 90894 Score = 50.1 bits (25), Expect = 0.023 Identities = 49/57 (85%) Strand = Plus / Minus Query: 579 ttcgtatgtagttttctagtgaaagctctaaaaagacttataattagtaacgaaggg 635 |||||||||||| |||| ||||| |||||||||||||||| |||| |||| |||| Sbjct: 71751 ttcgtatgtagtcctctattgaaatgtctaaaaagacttatatttaggaacggaggg 71695 Score = 42.1 bits (21), Expect = 5.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 |||||||| | || |||||||||||| |||| |||| |||||||| Sbjct: 73910 tagtgaaatcgcttaaaagacttatatttaggaacggagggagta 73866
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| |||||||||||||||| |||| ||||| ||||||| || |||||||||||| Sbjct: 93809 actctaaagtatgtctatatacatccgtacgtagtcctctagtgcaatctctaaaaagac 93868 Query: 616 ttata 620 ||||| Sbjct: 93869 ttata 93873 Score = 65.9 bits (33), Expect = 4e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| ||||||||||||||| ||||| | || ||||||||| ||||| |||||| Sbjct: 67865 actctaaaatatgtctatatacatccgtatatggtccactagtgaaatctctacaaagac 67924 Query: 616 ttataattagtaacgaagggagtat 640 ||||| |||| |||| ||||||||| Sbjct: 67925 ttatatttaggaacggagggagtat 67949 Score = 63.9 bits (32), Expect = 2e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 564 gtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatt 623 |||||||||||||||| ||||||||||| |||| || ||||| ||||||||||| || Sbjct: 55646 gtatgtctatatacatccgtatgtagttcattagttgaacctctagaaagacttatattt 55705 Query: 624 agtaacgaagggagta 639 || |||| |||||||| Sbjct: 55706 aggaacggagggagta 55721 Score = 44.1 bits (22), Expect = 1.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaatctttctaaagattctactag 549 |||||| ||| || |||||||||| ||||| || |||||||||||| Sbjct: 4733 tactccatccgttcctaaatataagtctttttagagattctactag 4778 Score = 42.1 bits (21), Expect = 5.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 604 ctctaaaaagacttataattagtaacgaagggagtat 640 ||||||||||||||||| |||| |||| | ||||||| Sbjct: 4768 ctctaaaaagacttatatttaggaacggatggagtat 4732 Score = 42.1 bits (21), Expect = 5.7 Identities = 55/65 (84%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| |||||| ||||||||| |||||||||| ||||| || ||||| |||||| Sbjct: 4812 actctaaggtatgtatatatacatccgtatgtagtccg-tagtggaacctctacaaagac 4870 Query: 616 ttata 620 ||||| Sbjct: 4871 ttata 4875 Score = 42.1 bits (21), Expect = 5.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 |||||||| | || |||||||||||| |||| |||| |||||||| Sbjct: 93773 tagtgaaatcgcttaaaagacttatatttaggaacggagggagta 93729
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Minus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| |||||||||||||||| |||| ||||| ||||||| || |||||||||||| Sbjct: 2100 actctaaagtatgtctatatacatccgtacgtagtcctctagtgcaatctctaaaaagac 2041 Query: 616 ttata 620 ||||| Sbjct: 2040 ttata 2036 Score = 42.1 bits (21), Expect = 5.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 |||||||| | || |||||||||||| |||| |||| |||||||| Sbjct: 2136 tagtgaaatcgcttaaaagacttatatttaggaacggagggagta 2180
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 71.9 bits (36), Expect = 6e-09 Identities = 73/84 (86%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| ||||||||||||| || ||||||||| |||||| ||||| || ||||||||| Sbjct: 1527 actctaaagtatgtctatataaatccgtatgtag-tttctaatgaaacctttaaaaagac 1469 Query: 616 ttataattagtaacgaagggagta 639 ||||| |||| || | |||||||| Sbjct: 1468 ttatatttaggaatggagggagta 1445 Score = 48.1 bits (24), Expect = 0.093 Identities = 33/36 (91%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaatctttctaaag 539 ||||||||||||| |||||||||| ||||| ||||| Sbjct: 1445 tactccctccattcctaaatataagtctttttaaag 1480
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 69.9 bits (35), Expect = 3e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 564 gtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatt 623 ||||||||| |||||| |||||||||| | |||||||| ||||||||||||||||| || Sbjct: 91756 gtatgtctaaatacatccgtatgtagtcctatagtgaaacctctaaaaagacttatattt 91697 Query: 624 agtaacg 630 || |||| Sbjct: 91696 aggaacg 91690 Score = 56.0 bits (28), Expect = 4e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| |||||||||||||||| ||||||||| || ||||| |||| |||||| Sbjct: 85318 actctaaagtatgtctatatacatccgtatgtagcgcattaatgaaacctctttaaagac 85259 Query: 616 ttataattagtaacgaagggagta 639 ||||| |||| || |||||||||| Sbjct: 85258 ttatatttaggaatgaagggagta 85235 Score = 48.1 bits (24), Expect = 0.093 Identities = 51/60 (85%) Strand = Plus / Plus Query: 582 gtatgtagttttctagtgaaagctctaaaaagacttataattagtaacgaagggagtatt 641 ||||||||| | |||||||| ||| |||||||||||| |||| |||| |||||||||| Sbjct: 91787 gtatgtagtctcttagtgaaatttcttaaaagacttatatttaggaacggagggagtatt 91846 Score = 46.1 bits (23), Expect = 0.37 Identities = 41/47 (87%) Strand = Plus / Minus Query: 579 ttcgtatgtagttttctagtgaaagctctaaaaagacttataattag 625 ||||||||||| ||||||||||| | |||||||||||||| |||| Sbjct: 18711 ttcgtatgtagacttctagtgaaatttttaaaaagacttatatttag 18665 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 569 tctatatacattcgtatgtagt 590 |||||||||||||||||||||| Sbjct: 18743 tctatatacattcgtatgtagt 18764
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 69.9 bits (35), Expect = 3e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 553 tatactctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaa 612 |||||||||| ||||||||||||||||| |||||||| || |||||||| || |||||| Sbjct: 59972 tatactctaaattatgtctatatacattcatatgtagtgttttagtgaaacctgtaaaaa 59913 Query: 613 gacttataattagtaacgaagggagta 639 |||| || |||| |||| | |||||| Sbjct: 59912 aacttttatttagaaacggatggagta 59886 Score = 42.1 bits (21), Expect = 5.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaatctttctaaagattctacta 548 |||||||||| ||| ||||||||||||||| | ||||| ||||| Sbjct: 49577 tactccctccgttttaaaatataaatctttccatagattgtacta 49533 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaa 528 |||||||||| |||||||||||||| Sbjct: 56938 tactccctccgtttctaaatataaa 56914
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 67.9 bits (34), Expect = 1e-07 Identities = 73/85 (85%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 557 ctctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctct--aaaaaga 614 |||||| ||| |||||||||||| |||||||||| || |||||||| |||| ||||||| Sbjct: 143258 ctctaaagtacgtctatatacatccgtatgtagtcttgtagtgaaacctctaaaaaaaga 143317 Query: 615 cttataattagtaacgaagggagta 639 |||||| |||| |||| || ||||| Sbjct: 143318 cttatatttaggaacggagcgagta 143342 Score = 60.0 bits (30), Expect = 2e-05 Identities = 73/86 (84%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| |||||||||||||||| |||| |||| | |||||||| ||| ||||||| Sbjct: 227 actctaaagtatgtctatatacatccgtacatagtctg-tagtgaaatttcttaaaagac 285 Query: 616 ttataattagtaacgaagggagtatt 641 ||||| |||| |||| |||||||||| Sbjct: 286 ttatatttaggaacggagggagtatt 311 Score = 54.0 bits (27), Expect = 0.002 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 553 tatactctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaa 612 |||||||||| ||||||||| ||||| ||||||||| ||| |||| || |||||||| Sbjct: 1669 tatactctaaaatatgtctatgtacatccgtatgtag-tttatagtacaatctctaaaag 1727 Query: 613 gacttataattagtaacgaagggagta 639 | |||||| |||| |||| |||||||| Sbjct: 1728 gtcttatatttaggaacggagggagta 1754 Score = 50.1 bits (25), Expect = 0.023 Identities = 31/33 (93%) Strand = Plus / Minus Query: 607 taaaaagacttataattagtaacgaagggagta 639 |||||||||||||| |||| ||||||||||||| Sbjct: 97003 taaaaagacttatatttaggaacgaagggagta 96971 Score = 48.1 bits (24), Expect = 0.093 Identities = 36/40 (90%) Strand = Plus / Minus Query: 553 tatactctaatgtatgtctatatacattcgtatgtagttt 592 |||||||||| |||| ||||| ||||| |||||||||||| Sbjct: 142776 tatactctaaagtatatctatgtacatccgtatgtagttt 142737 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 607 taaaaagacttataattagtaacgaagggagta 639 |||||||||||||| |||| |||| |||||||| Sbjct: 136716 taaaaagacttatatttaggaacggagggagta 136684 Score = 42.1 bits (21), Expect = 5.7 Identities = 51/61 (83%) Strand = Plus / Minus Query: 581 cgtatgtagttttctagtgaaagctctaaaaagacttataattagtaacgaagggagtat 640 |||||||||||| ||| ||||| || |||||||||||| |||| |||| ||| ||||| Sbjct: 190810 cgtatgtagtttcctaatgaaaacttctaaaagacttatatttagaaacggaggaagtat 190751 Query: 641 t 641 | Sbjct: 190750 t 190750 Score = 42.1 bits (21), Expect = 5.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 579 ttcgtatgtagttttctagtgaaagctctaaaaagacttataattagtaacgaagggagt 638 ||||||||||| |||||||||| | || |||||||||||| |||| |||| ||| ||| Sbjct: 194440 ttcgtatgtagacatctagtgaaatcgcttaaaagacttatatttaggaacggaggaagt 194499 Query: 639 a 639 | Sbjct: 194500 a 194500
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 67.9 bits (34), Expect = 1e-07 Identities = 61/70 (87%) Strand = Plus / Plus Query: 570 ctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataattagtaac 629 |||||||||| |||||||||| ||||||||| ||||| ||||||||||| |||| ||| Sbjct: 371 ctatatacatccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaac 430 Query: 630 gaagggagta 639 | |||||||| Sbjct: 431 ggagggagta 440
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 67.9 bits (34), Expect = 1e-07 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| |||||||||||||||| ||||||||| || ||||| || |||||||||||| Sbjct: 7495 actctaaagtatgtctatatacatccgtatgtag-ttcgtagtggaatctctaaaaagac 7437 Query: 616 ttataattagtaacgaagggagtatt 641 |||| |||| || | |||||||||| Sbjct: 7436 ctatatttaggaatggagggagtatt 7411 Score = 42.1 bits (21), Expect = 5.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaatctttctaaagattctacta 548 ||||||||||||| ||||||||| ||||| || |||||| |||| Sbjct: 7413 tactccctccattcctaaatataggtctttttagagattccacta 7457 Score = 42.1 bits (21), Expect = 5.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 ||||| || ||||||||||||||||| |||| |||| || ||||| Sbjct: 7530 tagtgtaatctctaaaaagacttatatttaggaacggagtgagta 7574
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 65.9 bits (33), Expect = 4e-07 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 565 tatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatta 624 ||||||||| ||||| ||||||||| ||| ||||| || |||||||||| |||||| ||| Sbjct: 273 tatgtctatgtacatccgtatgtag-tttatagtgcaatctctaaaaagtcttatattta 331 Query: 625 gtaacgaagggagtatt 641 | |||| |||||||||| Sbjct: 332 ggaacggagggagtatt 348 Score = 56.0 bits (28), Expect = 4e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| ||||||||||||||| |||||||||| | || ||||| |||| ||| || Sbjct: 8448 actctaaaatatgtctatatacatccgtatgtagtctattaatgaaatctctttaaaaac 8389 Query: 616 ttataattagtaacgaagggagta 639 ||||| |||| |||| |||||||| Sbjct: 8388 ttatatttaggaacggagggagta 8365 Score = 52.0 bits (26), Expect = 0.006 Identities = 59/70 (84%) Strand = Plus / Minus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| |||||||||||||||| ||||||||| | || ||||| |||| |||||| Sbjct: 8315 actctaaaatatgtctatatacatttgtatgtagtctattaatgaaatctctttaaagac 8256 Query: 616 ttataattag 625 ||||| |||| Sbjct: 8255 ttatatttag 8246
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 65.9 bits (33), Expect = 4e-07 Identities = 58/65 (89%), Gaps = 1/65 (1%) Strand = Plus / Minus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| |||||||||||||||| |||||||||| | |||||||| |||||||| ||| Sbjct: 6281 actctaaagtatgtctatatacatccgtatgtagtcct-tagtgaaatctctaaaatgac 6223 Query: 616 ttata 620 ||||| Sbjct: 6222 ttata 6218
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 63.9 bits (32), Expect = 2e-06 Identities = 65/76 (85%) Strand = Plus / Minus Query: 564 gtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatt 623 ||||||| |||||||| |||||||| | ||||||||||| |||| ||||||||||| || Sbjct: 21932 gtatgtccatatacatccgtatgtaatcttctagtgaaatctctttaaagacttatattt 21873 Query: 624 agtaacgaagggagta 639 || ||| |||||||| Sbjct: 21872 aggaacagagggagta 21857 Score = 54.0 bits (27), Expect = 0.002 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 553 tatactctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaa 612 |||||||||| ||||||||| ||||| ||||||||| ||| |||| || |||||||| Sbjct: 5451 tatactctaaaatatgtctatgtacatccgtatgtag-tttatagtataatctctaaaag 5393 Query: 613 gacttataattagtaacgaagggagta 639 | |||||| |||| |||| |||||||| Sbjct: 5392 gtcttatatttaggaacggagggagta 5366 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagtatt 641 |||||||| ||||||||||||||||| |||| | || |||||||||| Sbjct: 21976 tagtgaaatctctaaaaagacttatatttaggatcggagggagtatt 22022
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 63.9 bits (32), Expect = 2e-06 Identities = 66/76 (86%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 565 tatgtctat-atacattcgtatgtagttttctagtgaaagctctaaaaagacttataatt 623 ||||||||| |||||| |||||||||||| ||||| || ||||||||||||||||| || Sbjct: 8796 tatgtctatgatacatccgtatgtagtttaatagtggaatctctaaaaagacttatattt 8737 Query: 624 agtaacgaagggagta 639 || ||| |||||||| Sbjct: 8736 aggaactgagggagta 8721
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 61.9 bits (31), Expect = 6e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 565 tatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatta 624 ||||| ||||||||||||||||||||| |||||||| || || ||||||||||| ||| Sbjct: 23363 tatgtttatatacattcgtatgtagttcattagtgaaatctttagaaagacttatattta 23422 Query: 625 gtaacgaagggagta 639 | ||| |||||||| Sbjct: 23423 ggaacagagggagta 23437 Score = 46.1 bits (23), Expect = 0.37 Identities = 35/39 (89%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaatctttctaaagatt 542 ||||||||| || |||||||||| |||||||||||||| Sbjct: 23437 tactccctctgttcctaaatataagtctttctaaagatt 23399 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 516 ttctaaatataaatctttctaaagattctacta 548 |||||||||||| ||||| |||||||| ||||| Sbjct: 23226 ttctaaatataagtctttataaagattttacta 23194
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 58.0 bits (29), Expect = 1e-04 Identities = 62/73 (84%) Strand = Plus / Plus Query: 553 tatactctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaa 612 |||| ||||| |||| ||||||||||| |||||||||| ||||| ||| ||||| ||| Sbjct: 5395 tatattctaaagtatatctatatacatccgtatgtagtccactagtaaaatctctagaaa 5454 Query: 613 gacttataattag 625 |||||||| |||| Sbjct: 5455 gacttatatttag 5467 Score = 42.1 bits (21), Expect = 5.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 |||||||| | || |||||||||||| |||| |||| |||||||| Sbjct: 5200 tagtgaaatcgcttaaaagacttatatttaggaacggagggagta 5156 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 517 tctaaatataaatctttctaaagattctactag 549 ||||||||||| |||||||| ||||| |||||| Sbjct: 5468 tctaaatataagtctttctagagattttactag 5436
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Plus Query: 571 tatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataattagtaacg 630 |||||| || |||||||||| | |||||| || ||||| ||||||||||| |||| |||| Sbjct: 348 tatatatatccgtatgtagtctactagtggaatctctagaaagacttatatttaggaacg 407 Query: 631 aagggagta 639 |||||||| Sbjct: 408 gagggagta 416 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 502 tgtactccctccatttctaaatataaatctttctaaagattctactag 549 |||||||||||| || |||||||||| |||||||| |||||| ||||| Sbjct: 418 tgtactccctccgttcctaaatataagtctttctagagattccactag 371 Score = 48.1 bits (24), Expect = 0.093 Identities = 39/44 (88%) Strand = Plus / Minus Query: 597 gtgaaagctctaaaaagacttataattagtaacgaagggagtat 640 |||||| |||| |||||||||||| |||| |||| ||||||||| Sbjct: 293 gtgaaatctcttaaaagacttatatttagaaacggagggagtat 250 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaatcttt 533 |||||||||| ||||||||||||| ||||| Sbjct: 251 tactccctccgtttctaaatataagtcttt 280
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 56.0 bits (28), Expect = 4e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 581 cgtatgtagttttctagtgaaagctctaaaaagacttataattagtaacgaagggagtat 640 ||||||||| ||||||||||| ||| |||||||||||| |||| |||| ||||||||| Sbjct: 447 cgtatgtagacttctagtgaaatatcttaaaagacttatatttagaaacggagggagtat 388 Score = 48.1 bits (24), Expect = 0.093 Identities = 63/76 (82%) Strand = Plus / Plus Query: 564 gtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatt 623 |||||||||||| ||| ||||||||||| ||| |||| |||| |||| |||||| || Sbjct: 477 gtatgtctatatgcatccgtatgtagttcactaaagaaacctctttaaagtcttatattt 536 Query: 624 agtaacgaagggagta 639 || |||| |||||||| Sbjct: 537 aggaacggagggagta 552 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaatcttt 533 |||||||||| ||||||||||||| ||||| Sbjct: 389 tactccctccgtttctaaatataagtcttt 418
>gb|DQ995510.1| Hordeum vulgare clone 509d02_c-83 genomic sequence Length = 10179 Score = 54.0 bits (27), Expect = 0.002 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 553 tatactctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaa 612 |||||||||| ||||||||||||||||||||| ||| | | || || || |||||||| Sbjct: 8295 tatactctaaaatatgtctatatacattcgtatatag-tctataatgtaatctctaaaag 8237 Query: 613 gacttataattagtaacgaagggagta 639 | |||||| |||| |||| |||||||| Sbjct: 8236 gtcttatatttaggaacggagggagta 8210 Score = 48.1 bits (24), Expect = 0.093 Identities = 69/84 (82%) Strand = Plus / Plus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| ||||||||||||||| |||| ||||| |||||||| || | |||||| Sbjct: 8082 actctaaaatatgtctatatacatccgtacgtagtccattagtgaaacctttttaaagac 8141 Query: 616 ttataattagtaacgaagggagta 639 ||||| |||| |||| |||||||| Sbjct: 8142 ttatatttaggaacggagggagta 8165
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 54.0 bits (27), Expect = 0.002 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 553 tatactctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaa 612 |||||||||| ||||||||| ||||| ||||||||| ||| |||| || |||||||| Sbjct: 5717 tatactctaaaatatgtctatgtacatccgtatgtag-tttatagtacaatctctaaaag 5775 Query: 613 gacttataattagtaacgaagggagta 639 | |||||| |||| |||| |||||||| Sbjct: 5776 gtcttatatttaggaacggagggagta 5802
>emb|CR855143.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0113I13, complete sequence Length = 138656 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Minus Query: 501 ttgtactccctccatttctaaatata 526 |||||||||||||||||||||||||| Sbjct: 57913 ttgtactccctccatttctaaatata 57888
>emb|CT009625.1| Aegilops tauschii Length = 117310 Score = 52.0 bits (26), Expect = 0.006 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 574 atacattcgtatgtagttttctagtgaaagctctaaaaagacttataattagtaacgaag 633 |||||| |||||||||||| |||||||| ||||||||||||||| | ||| |||| || Sbjct: 10109 atacatccgtatgtagtttg-tagtgaaatctctaaaaagacttacatttaagaacggag 10167 Query: 634 ggagta 639 |||||| Sbjct: 10168 ggagta 10173 Score = 46.1 bits (23), Expect = 0.37 Identities = 29/31 (93%) Strand = Plus / Minus Query: 595 tagtgaaagctctaaaaagacttataattag 625 |||||||| ||||||||||||||||| |||| Sbjct: 10088 tagtgaaatctctaaaaagacttatatttag 10058
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 500 cttgtactccctccatttctaaatat 525 |||||||||||||||||||||||||| Sbjct: 34280 cttgtactccctccatttctaaatat 34305
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 500 cttgtactccctccatttctaaatat 525 |||||||||||||||||||||||||| Sbjct: 27425396 cttgtactccctccatttctaaatat 27425421 Score = 48.1 bits (24), Expect = 0.093 Identities = 24/24 (100%) Strand = Plus / Minus Query: 502 tgtactccctccatttctaaatat 525 |||||||||||||||||||||||| Sbjct: 363814 tgtactccctccatttctaaatat 363791 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 12743678 tactccctccatttctaaatat 12743657 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 14219895 tactccctccatttctaaatat 14219874 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 14931206 tactccctccatttctaaatat 14931185 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 16172209 tactccctccatttctaaatat 16172230 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 497 tagcttgtactccctccatttctaaatat 525 ||||| ||||||||||| ||||||||||| Sbjct: 20902546 tagctagtactccctccgtttctaaatat 20902574 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 501 ttgtactccctccatttctaaatat 525 |||||||||||||||||||| |||| Sbjct: 34087628 ttgtactccctccatttctacatat 34087604
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatataaatctttctaaagatt 542 |||||||||||||||| |||||||||| ||||| || ||||| Sbjct: 2782 ttgtactccctccattcctaaatataagtctttgtagagatt 2823 Score = 42.1 bits (21), Expect = 5.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 |||||||| ||||| ||||||||||| |||| || | |||||||| Sbjct: 2829 tagtgaaatctctacaaagacttatatttaggaatggagggagta 2785 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 610 aaagacttataattagtaacgaagggagtattc 642 ||||||||||| |||| |||| ||||||||||| Sbjct: 2917 aaagacttatatttaggaacggagggagtattc 2949
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 566 atgtctatatacattcgtatgtagtt 591 |||||||||||||||||||||||||| Sbjct: 178068 atgtctatatacattcgtatgtagtt 178093 Score = 42.1 bits (21), Expect = 5.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 565 tatgtctatatacattcgtatgtagttttctagtgaa 601 ||||||||||||| | |||| ||||||||||||||| Sbjct: 177911 tatgtctatatacgtcagtatctagttttctagtgaa 177947
>gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1036 gene, complete cds Length = 29663 Score = 50.1 bits (25), Expect = 0.023 Identities = 43/49 (87%) Strand = Plus / Plus Query: 502 tgtactccctccatttctaaatataaatctttctaaagattctactagg 550 ||||||||||||||| |||||| || |||||| || |||||| |||||| Sbjct: 17079 tgtactccctccattcctaaatgtatatctttttagagattccactagg 17127
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 50.1 bits (25), Expect = 0.023 Identities = 34/37 (91%) Strand = Plus / Minus Query: 604 ctctaaaaagacttataattagtaacgaagggagtat 640 ||||||||||||||||| |||| |||| ||||||||| Sbjct: 1251 ctctaaaaagacttatatttaggaacggagggagtat 1215
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 50.1 bits (25), Expect = 0.023 Identities = 34/37 (91%) Strand = Plus / Minus Query: 604 ctctaaaaagacttataattagtaacgaagggagtat 640 ||||||||||||||||| |||| |||| ||||||||| Sbjct: 1257 ctctaaaaagacttatatttaggaacggagggagtat 1221
>gb|AY020623.1| Oryza sativa microsatellite MRG2948 containing (TA)X12, closest to marker S12540, genomic sequence Length = 224 Score = 50.1 bits (25), Expect = 0.023 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatat 525 ||||||||||||||||||||||||| Sbjct: 141 ttgtactccctccatttctaaatat 165
>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1 through 8 Length = 4976 Score = 50.1 bits (25), Expect = 0.023 Identities = 59/69 (85%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 557 ctctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagact 616 |||||| |||||| ||||||||| ||||||||| ||| | ||||| || |||||||||| Sbjct: 2289 ctctaaagtatgtttatatacatccgtatgtag-tttgtgatgaaatctataaaaagact 2231 Query: 617 tataattag 625 |||| |||| Sbjct: 2230 tatatttag 2222
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 50.1 bits (25), Expect = 0.023 Identities = 55/65 (84%) Strand = Plus / Minus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagac 615 ||||||| ||||||||| |||||| |||||||||| | |||| || ||||| |||||| Sbjct: 1743 actctaaagtatgtctacatacatccgtatgtagtcctatagtagaatctctagaaagac 1684 Query: 616 ttata 620 ||||| Sbjct: 1683 ttata 1679 Score = 46.1 bits (23), Expect = 0.37 Identities = 41/47 (87%) Strand = Plus / Plus Query: 593 tctagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 |||||||||| ||| |||||||||||| |||| |||| |||||||| Sbjct: 1777 tctagtgaaatatcttaaaagacttatatttaggaacggagggagta 1823 Score = 42.1 bits (21), Expect = 5.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaatctttctaaagattctacta 548 |||||||||| || | ||||||| |||||||| ||||||||||| Sbjct: 1660 tactccctccgttccataatataagtctttctagagattctacta 1704
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 50.1 bits (25), Expect = 0.023 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatat 525 ||||||||||||||||||||||||| Sbjct: 3261720 ttgtactccctccatttctaaatat 3261744 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 2689076 tactccctccatttctaaatat 2689055 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 4243913 tactccctccatttctaaatat 4243892 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 8281503 tactccctccatttctaaatat 8281524 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 9443118 tactccctccatttctaaatat 9443139 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 12365798 tactccctccatttctaaatat 12365819 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 actccctccatttctaaatat 525 ||||||||||||||||||||| Sbjct: 7517995 actccctccatttctaaatat 7517975
>gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete sequence Length = 130178 Score = 50.1 bits (25), Expect = 0.023 Identities = 28/29 (96%) Strand = Plus / Minus Query: 500 cttgtactccctccatttctaaatataaa 528 |||||||||||||| |||||||||||||| Sbjct: 93092 cttgtactccctccgtttctaaatataaa 93064
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 50.1 bits (25), Expect = 0.023 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatat 525 ||||||||||||||||||||||||| Sbjct: 71413 ttgtactccctccatttctaaatat 71437
>gb|AC123571.8| Medicago truncatula clone mth1-14n3, complete sequence Length = 84556 Score = 50.1 bits (25), Expect = 0.023 Identities = 25/25 (100%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 ||||||||||||||||||||||||| Sbjct: 37184 gtactccctccatttctaaatataa 37160 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 |||||||||||||| |||||||||| Sbjct: 37038 tactccctccatttttaaatataaa 37062
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 50.1 bits (25), Expect = 0.023 Identities = 71/85 (83%), Gaps = 1/85 (1%) Strand = Plus / Minus Query: 556 actctaatgtatgtctatatacattcgtatgtagttttcta-gtgaaagctctaaaaaga 614 ||||||| ||||||||||||||||||||||| || || | ||||| ||||||||||| Sbjct: 2324 actctaaaatatgtctatatacattcgtatgtggtagtccatttgaaatctctaaaaaga 2265 Query: 615 cttataattagtaacgaagggagta 639 | ||| |||| |||| |||||||| Sbjct: 2264 caaatatttaggaacggagggagta 2240
>dbj|D50641.1| Hordeum vulgare Ids1 gene for metallothionein-like protein, complete cds Length = 1819 Score = 50.1 bits (25), Expect = 0.023 Identities = 37/41 (90%) Strand = Plus / Plus Query: 502 tgtactccctccatttctaaatataaatctttctaaagatt 542 |||||||||||| ||| ||||||||| ||||| |||||||| Sbjct: 316 tgtactccctccgtttttaaatataagtctttataaagatt 356
>gb|DQ995512.1| Hordeum vulgare clone 604d05_c-100 genomic sequence Length = 16633 Score = 48.1 bits (24), Expect = 0.093 Identities = 27/28 (96%) Strand = Plus / Minus Query: 564 gtatgtctatatacattcgtatgtagtt 591 |||||||||||||||| ||||||||||| Sbjct: 11928 gtatgtctatatacatccgtatgtagtt 11901
>gb|AC149639.22| Medicago truncatula chromosome 8 clone mth2-154b23, complete sequence Length = 112385 Score = 48.1 bits (24), Expect = 0.093 Identities = 24/24 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataa 527 |||||||||||||||||||||||| Sbjct: 105647 tactccctccatttctaaatataa 105670
>dbj|AB272098.1| Triticum aestivum DNA, waxy gene related sequence Length = 1852 Score = 48.1 bits (24), Expect = 0.093 Identities = 33/36 (91%) Strand = Plus / Minus Query: 604 ctctaaaaagacttataattagtaacgaagggagta 639 ||||||||| ||||||| |||| ||||||||||||| Sbjct: 903 ctctaaaaatacttatatttaggaacgaagggagta 868
>gb|AC148237.7| Medicago truncatula clone mth2-1o14, complete sequence Length = 116678 Score = 48.1 bits (24), Expect = 0.093 Identities = 24/24 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataa 527 |||||||||||||||||||||||| Sbjct: 56832 tactccctccatttctaaatataa 56855
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 48.1 bits (24), Expect = 0.093 Identities = 24/24 (100%) Strand = Plus / Minus Query: 502 tgtactccctccatttctaaatat 525 |||||||||||||||||||||||| Sbjct: 91344 tgtactccctccatttctaaatat 91321
>gb|AY785888.1| Hordeum vulgare subsp. vulgare cultivar Optic HvCBF10B (CBF10B) mRNA, complete cds Length = 1041 Score = 48.1 bits (24), Expect = 0.093 Identities = 36/40 (90%) Strand = Plus / Minus Query: 581 cgtatgtagttttctagtgaaagctctaaaaagacttata 620 |||||||||||||||| ||||| |||||||| | |||||| Sbjct: 965 cgtatgtagttttctactgaaatctctaaaaggtcttata 926
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 48.1 bits (24), Expect = 0.093 Identities = 63/76 (82%) Strand = Plus / Plus Query: 565 tatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatta 624 ||||||||||||||| |||||||||| |||| | ||||| ||||||||||| ||| Sbjct: 2281 tatgtctatatacatccgtatgtagtccattagttggacctctagaaagacttatattta 2340 Query: 625 gtaacgaagggagtat 640 | |||| ||||||||| Sbjct: 2341 ggaacggagggagtat 2356
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 48.1 bits (24), Expect = 0.093 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 569 tctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataattagtaa 628 ||||||||||| ||||||| ||| |||||||| ||||| ||||||||||| |||| || Sbjct: 23203 tctatatacatccgtatgtggttca-tagtgaaatctctacaaagacttatatttaggaa 23261 Query: 629 cgaagggagtat 640 || ||| ||||| Sbjct: 23262 cggaggaagtat 23273
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.093 Identities = 24/24 (100%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaatata 526 |||||||||||||||||||||||| Sbjct: 3569650 gtactccctccatttctaaatata 3569673 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1411 atatgctaggggtattttggtcc 1433 ||||||||||||||||||||||| Sbjct: 9273851 atatgctaggggtattttggtcc 9273873 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 17418745 tactccctccatttctaaatat 17418724 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 21154094 tactccctccatttctaaatat 21154115 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 21747372 tactccctccatttctaaatat 21747351 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 26516681 tactccctccatttctaaatat 26516702 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 27589723 tactccctccatttctaaatat 27589702 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaatctttcta 536 ||||||||||||||| |||||||||| ||||| Sbjct: 3078190 tactccctccatttcacaatataaatcattcta 3078222 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 ||||||||||||||| ||||||||| Sbjct: 14268604 tactccctccatttcaaaatataaa 14268628 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 502 tgtactccctccatttctaaatata 526 ||||||||||||||||| ||||||| Sbjct: 14268845 tgtactccctccatttcaaaatata 14268821
>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0675A05 Length = 131972 Score = 48.1 bits (24), Expect = 0.093 Identities = 24/24 (100%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaatata 526 |||||||||||||||||||||||| Sbjct: 61487 gtactccctccatttctaaatata 61510
>gb|AC155880.3| Medicago truncatula chromosome 2 BAC clone mte1-55i22, complete sequence Length = 118734 Score = 48.1 bits (24), Expect = 0.093 Identities = 24/24 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataa 527 |||||||||||||||||||||||| Sbjct: 94702 tactccctccatttctaaatataa 94725
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 48.1 bits (24), Expect = 0.093 Identities = 51/60 (85%) Strand = Plus / Minus Query: 581 cgtatgtagttttctagtgaaagctctaaaaagacttataattagtaacgaagggagtat 640 ||||||||| ||||| ||||| ||| |||||||||||| |||| |||| ||||||||| Sbjct: 146 cgtatgtagacttctactgaaatatcttaaaagacttatatttagaaacggagggagtat 87 Score = 48.1 bits (24), Expect = 0.093 Identities = 63/76 (82%) Strand = Plus / Plus Query: 564 gtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatt 623 |||||||||||| ||| ||||||||||| ||| |||| |||| |||| |||||| || Sbjct: 176 gtatgtctatatgcatccgtatgtagttcactaaagaaacctctttaaagtcttatattt 235 Query: 624 agtaacgaagggagta 639 || |||| |||||||| Sbjct: 236 aggaacggagggagta 251 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaatcttt 533 |||||||||| ||||||||||||| ||||| Sbjct: 88 tactccctccgtttctaaatataagtcttt 117
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 48.1 bits (24), Expect = 0.093 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 564 gtatgtctatatacattcgtatgtagttttctagtgaaagctctaaaaagacttataatt 623 |||||||||||||||| ||||||||| | ||||| || || ||||||||||||| || Sbjct: 3586 gtatgtctatatacatccgtatgtag-tccatagtggaatgtcgaaaaagacttatattt 3644 Query: 624 agtaacgaagggagta 639 || |||| |||||||| Sbjct: 3645 aggaacggagggagta 3660 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 501 ttgtactccctccatttctaaatataaatcttt 533 ||||||||||||| || |||||||||| ||||| Sbjct: 3663 ttgtactccctccgttcctaaatataagtcttt 3631
>gb|AC151822.29| Medicago truncatula clone mth2-32h21, complete sequence Length = 118094 Score = 48.1 bits (24), Expect = 0.093 Identities = 24/24 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataa 527 |||||||||||||||||||||||| Sbjct: 32695 tactccctccatttctaaatataa 32672
>ref|XM_001234449.1| PREDICTED: Gallus gallus similar to otoancorin (LOC771927), mRNA Length = 1940 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Minus Query: 821 tgtgttatacaatgaaatgaatg 843 ||||||||||||||||||||||| Sbjct: 299 tgtgttatacaatgaaatgaatg 277
>gb|DQ995508.1| Hordeum vulgare clone 509d02_c-18 genomic sequence Length = 17493 Score = 46.1 bits (23), Expect = 0.37 Identities = 32/35 (91%) Strand = Plus / Plus Query: 607 taaaaagacttataattagtaacgaagggagtatt 641 |||||| ||||||| |||| ||||||||||||||| Sbjct: 15846 taaaaaaacttatatttagaaacgaagggagtatt 15880
>gb|AC182260.2| Gallus gallus BAC clone CH261-78E22 from chromosome w, complete sequence Length = 177518 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1429 ggtcccttcagatgctaggaaat 1451 ||||||||||||||||||||||| Sbjct: 75132 ggtcccttcagatgctaggaaat 75154
>gb|AC182259.3| Gallus gallus BAC clone TAM31-16L19 from chromosome w, complete sequence Length = 137911 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1429 ggtcccttcagatgctaggaaat 1451 ||||||||||||||||||||||| Sbjct: 51992 ggtcccttcagatgctaggaaat 52014
>emb|CR962123.2| Medicago truncatula chromosome 5 clone mth2-167a19, COMPLETE SEQUENCE Length = 128818 Score = 46.1 bits (23), Expect = 0.37 Identities = 26/27 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataaat 529 ||||||||||| ||||||||||||||| Sbjct: 53874 gtactccctccgtttctaaatataaat 53848
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Minus Query: 502 tgtactccctccatttctaaata 524 ||||||||||||||||||||||| Sbjct: 87030 tgtactccctccatttctaaata 87008 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 86791 tactccctccatttctaaatat 86812
>gb|AC122405.4| Mus musculus BAC clone RP24-119O6 from chromosome 12, complete sequence Length = 196285 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Minus Query: 271 atgctagagaggtgaggcaggaa 293 ||||||||||||||||||||||| Sbjct: 155649 atgctagagaggtgaggcaggaa 155627
>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18, complete sequence Length = 150279 Score = 46.1 bits (23), Expect = 0.37 Identities = 26/27 (96%) Strand = Plus / Minus Query: 502 tgtactccctccatttctaaatataaa 528 ||||||||||||||||| ||||||||| Sbjct: 45345 tgtactccctccatttcaaaatataaa 45319
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 0.37 Identities = 26/27 (96%) Strand = Plus / Minus Query: 502 tgtactccctccatttctaaatataaa 528 ||||||||||||||||| ||||||||| Sbjct: 1149539 tgtactccctccatttcaaaatataaa 1149513 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Minus Query: 502 tgtactccctccatttctaaata 524 ||||||||||||||||||||||| Sbjct: 6961772 tgtactccctccatttctaaata 6961750 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 3511864 tactccctccatttctaaatat 3511885 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 3800713 tactccctccatttctaaatat 3800692 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 6961533 tactccctccatttctaaatat 6961554 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 15866123 tactccctccatttctaaatat 15866102 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 24233758 tactccctccatttctaaatat 24233779 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 ||||||||||||||| ||||||||| Sbjct: 18376032 tactccctccatttccaaatataaa 18376056
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaatat 525 ||||||||||||||||||||||| Sbjct: 28510869 gtactccctccatttctaaatat 28510891 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 13944070 tactccctccatttctaaatat 13944049 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 15314041 tactccctccatttctaaatat 15314062 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 29726119 tactccctccatttctaaatat 29726140 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaata 524 ||||||||||||||||||||| Sbjct: 5886019 tactccctccatttctaaata 5886039 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatat 525 ||||||||||||||||| ||||||| Sbjct: 8232002 ttgtactccctccatttttaaatat 8232026 Score = 42.1 bits (21), Expect = 5.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 500 cttgtactccctccatttctaaatataaatctttcta 536 ||||||||||||||||||| ||||||| || ||||| Sbjct: 16980274 cttgtactccctccatttcacaatataagtcattcta 16980238
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 46.1 bits (23), Expect = 0.37 Identities = 26/27 (96%) Strand = Plus / Plus Query: 564 gtatgtctatatacattcgtatgtagt 590 |||||||||||||||| |||||||||| Sbjct: 3646 gtatgtctatatacatccgtatgtagt 3672
>emb|AJ719955.1| Gallus gallus mRNA for hypothetical protein, clone 8l23 Length = 1952 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Minus Query: 821 tgtgttatacaatgaaatgaatg 843 ||||||||||||||||||||||| Sbjct: 296 tgtgttatacaatgaaatgaatg 274
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaatat 525 ||||||||||||||||||||||| Sbjct: 134990 gtactccctccatttctaaatat 135012
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaatat 525 ||||||||||||||||||||||| Sbjct: 79710 gtactccctccatttctaaatat 79732
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1411 atatgctaggggtattttggtcc 1433 ||||||||||||||||||||||| Sbjct: 41192 atatgctaggggtattttggtcc 41214
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1411 atatgctaggggtattttggtcc 1433 ||||||||||||||||||||||| Sbjct: 2261 atatgctaggggtattttggtcc 2283
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 46.1 bits (23), Expect = 0.37 Identities = 35/39 (89%) Strand = Plus / Minus Query: 553 tatactctaatgtatgtctatatacattcgtatgtagtt 591 |||||||||| | ||||||||||||| ||||||||||| Sbjct: 1117 tatactctaaaatgtgtctatatacatccgtatgtagtt 1079
>gb|AC125478.14| Medicago truncatula clone mth2-31i19, complete sequence Length = 111256 Score = 46.1 bits (23), Expect = 0.37 Identities = 26/27 (96%) Strand = Plus / Minus Query: 501 ttgtactccctccatttctaaatataa 527 |||||||||||||||||| |||||||| Sbjct: 64634 ttgtactccctccatttcaaaatataa 64608
>emb|AJ512944.1|HVU512944 Hordeum vulgare cor14b gene for cold regulated protein Length = 1395 Score = 46.1 bits (23), Expect = 0.37 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatataa 527 ||||||||||||| ||||||||||||| Sbjct: 1366 ttgtactccctccgtttctaaatataa 1392
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 46.1 bits (23), Expect = 0.37 Identities = 35/39 (89%) Strand = Plus / Plus Query: 553 tatactctaatgtatgtctatatacattcgtatgtagtt 591 |||||||||| | ||||||||||||| ||||||||||| Sbjct: 3919 tatactctaavatgtgtctatatacatccgtatgtagtt 3957
>emb|AJ535061.1|OSA535061 Oryza sativa (japonica cultivar-group) mdr11 gene for MDR-like ABC transporter, exons 1-10 Length = 11305 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatat 525 ||||||||||||||||||||||| Sbjct: 6762 gtactccctccatttctaaatat 6740
>gb|M60732.1|BLYCLDAA Hordeum vulgare cold-regulated mRNA, 3' end Length = 653 Score = 46.1 bits (23), Expect = 0.37 Identities = 26/27 (96%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatataa 527 ||||||||||||| ||||||||||||| Sbjct: 600 ttgtactccctccgtttctaaatataa 626
>gb|DQ886922.1| Triticum monococcum subsp. monococcum VIL1 protein (VIL1) gene, complete cds Length = 4957 Score = 44.1 bits (22), Expect = 1.4 Identities = 40/46 (86%) Strand = Plus / Minus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagtat 640 ||||| || ||||| ||||||||||| |||| |||| ||||||||| Sbjct: 3954 tagtggaatctctacaaagacttatatttaggaacggagggagtat 3909
>dbj|AK240959.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065045G08, full insert sequence Length = 2829 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 2713 tactccctccatttctaaatat 2692
>gb|AC130808.36| Medicago truncatula clone mth2-34k9, complete sequence Length = 113091 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 614 acttataattagtaacgaagggagta 639 ||||||||||||||||| |||||||| Sbjct: 4479 acttataattagtaacggagggagta 4504
>gb|AC174344.9| Medicago truncatula clone mth2-167b8, complete sequence Length = 141135 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaat 529 |||| ||||||||||||||||||||| Sbjct: 104066 tacttcctccatttctaaatataaat 104091
>gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete sequence Length = 126163 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 102855 tactccctccatttctaaatat 102876
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 168385 tactccctccatttctaaatat 168364
>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007B15 map S10318, complete sequence Length = 125243 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 105819 tactccctccatttctaaatat 105840
>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24 map S20116S, complete sequence Length = 174210 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 29001 tactccctccatttctaaatat 29022
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 86195 tactccctccatttctaaatat 86174
>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04, complete sequence Length = 141171 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 48534 tactccctccatttctaaatat 48555
>gb|AC111122.13| Mus musculus chromosome 7, clone RP23-230L8, complete sequence Length = 175772 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 143634 atgctagagaggtgaggcagga 143613
>gb|AC136843.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094M06, complete sequence Length = 135583 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 38721 tactccctccatttctaaatat 38700
>gb|AC117783.9| Mus musculus chromosome 16, clone RP24-544H3, complete sequence Length = 164296 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 105326 atgctagagaggtgaggcagga 105305
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0094K23, complete sequence Length = 167482 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatata 526 |||||||||||||||||| ||||||| Sbjct: 136712 ttgtactccctccatttcaaaatata 136737
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatata 526 |||||||||||||||||| ||||||| Sbjct: 24380 ttgtactccctccatttcaaaatata 24405
>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07, complete sequence Length = 147122 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 140971 tactccctccatttctaaatat 140950
>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01, complete sequence Length = 88352 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 11615 tactccctccatttctaaatat 11594
>gb|AC157897.2| Mus musculus chromosome 15, clone RP23-442E13, complete sequence Length = 186421 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 141825 atgctagagaggtgaggcagga 141846
>gb|AC154885.8| Mus musculus chromosome 5, clone RP24-333I1, complete sequence Length = 176471 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 ttcatagataaaactgaaatga 420 |||||||||||||||||||||| Sbjct: 127199 ttcatagataaaactgaaatga 127178
>gb|AC135398.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079N13, complete sequence Length = 140946 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 117817 tactccctccatttctaaatat 117796
>gb|AC121279.7| Mus musculus chromosome 3, clone RP23-4F17, complete sequence Length = 207763 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 110743 atgctagagaggtgaggcagga 110722
>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete sequence Length = 137184 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 106090 tactccctccatttctaaatat 106111
>gb|AC132253.5| Mus musculus BAC clone RP24-456H22 from chromosome 19, complete sequence Length = 194083 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 149762 atgctagagaggtgaggcagga 149783
>gb|AC124470.4| Mus musculus BAC clone RP24-174O2 from chromosome 6, complete sequence Length = 187005 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 90148 atgctagagaggtgaggcagga 90169
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 34867 tactccctccatttctaaatat 34888
>gb|AC122914.4| Mus musculus BAC clone RP23-26F9 from 15, complete sequence Length = 207417 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 96654 atgctagagaggtgaggcagga 96675
>gb|AC158764.4| Mus musculus chromosome 1, clone RP24-248C2, complete sequence Length = 165228 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1003 agaatagaatttacatattctaaaat 1028 ||||||||||||||||||| |||||| Sbjct: 111625 agaatagaatttacatattttaaaat 111650
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 229496 tactccctccatttctaaatat 229475
>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence Length = 133324 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaatataaa 528 ||||||||||| |||||||||||||| Sbjct: 88383 gtactccctccgtttctaaatataaa 88408
>gb|AC154410.2| Mus musculus BAC clone RP23-168K22 from chromosome 13, complete sequence Length = 182242 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 71365 atgctagagaggtgaggcagga 71344
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 99211 tactccctccatttctaaatat 99190
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 48693 tactccctccatttctaaatat 48714
>gb|AC099400.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096E22, complete sequence Length = 133846 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 79159 tactccctccatttctaaatat 79138
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaata 524 |||||||||||||||||||||| Sbjct: 3545194 gtactccctccatttctaaata 3545215 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 4498105 tactccctccatttctaaatat 4498126 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 13809254 tactccctccatttctaaatat 13809275 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 19144819 tactccctccatttctaaatat 19144798
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 229496 tactccctccatttctaaatat 229475 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 14198295 tactccctccatttctaaatat 14198316 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 16309390 tactccctccatttctaaatat 16309369 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaata 524 ||||||||||||||||||||| Sbjct: 22088262 tactccctccatttctaaata 22088282
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 20117356 tactccctccatttctaaatat 20117377 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 20421130 tactccctccatttctaaatat 20421109 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 21041694 tactccctccatttctaaatat 21041673 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 491 cacttgtagcttgtactccctccat 515 |||||||| |||||||||||||||| Sbjct: 23740973 cacttgtatcttgtactccctccat 23740949
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 13767614 tactccctccatttctaaatat 13767593 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 15694297 tactccctccatttctaaatat 15694276 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatata 526 |||||||||||||||||| ||||||| Sbjct: 19541305 ttgtactccctccatttcaaaatata 19541330 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaat 529 ||||||||||||||| |||||||||| Sbjct: 21161022 tactccctccatttcaaaatataaat 21160997 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaatctttcta 536 ||||||||||||||| |||||||| ||||||| Sbjct: 9747755 tactccctccatttcataatataaaactttcta 9747723 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 |||||||||||||||| |||||||| Sbjct: 19976762 gtactccctccatttcaaaatataa 19976738
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 4199716 tactccctccatttctaaatat 4199695 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 5910960 tactccctccatttctaaatat 5910981 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 18706212 tactccctccatttctaaatat 18706191 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 25728602 tactccctccatttctaaatat 25728581 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaat 523 ||||||||||||||||||||| Sbjct: 7318839 gtactccctccatttctaaat 7318819
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 18478532 tactccctccatttctaaatat 18478553 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaatctttcta 536 |||||||||||||| |||||||||| |||||| Sbjct: 23277831 tactccctccattttaaaatataaatatttcta 23277799
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 14977566 tactccctccatttctaaatat 14977545 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 499 gcttgtactccctccatttctaaatataaa 528 |||| |||||||||| |||||||||||||| Sbjct: 32108921 gcttatactccctccgtttctaaatataaa 32108950 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 ||||||||||||||| ||||||||| Sbjct: 8362605 tactccctccatttcaaaatataaa 8362629 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 497 tagcttgtactccctccatttctaaatat 525 ||||| ||||||||||| ||||||||||| Sbjct: 11716977 tagctagtactccctccttttctaaatat 11717005 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaata 524 ||||||||||||||||||||| Sbjct: 23816825 tactccctccatttctaaata 23816805 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaatataa 527 |||||||||||||||| |||||||| Sbjct: 25925900 gtactccctccatttcaaaatataa 25925924 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 |||||||||||||||| |||||||| Sbjct: 41942830 gtactccctccatttcaaaatataa 41942806
>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 44.1 bits (22), Expect = 1.4 Identities = 37/42 (88%) Strand = Plus / Minus Query: 579 ttcgtatgtagttttctagtgaaagctctaaaaagacttata 620 |||||||||||| | ||||||||| || ||| |||||||||| Sbjct: 11709 ttcgtatgtagtctcctagtgaaatctttaagaagacttata 11668
>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0784G04 Length = 157458 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 14856 tactccctccatttctaaatat 14835
>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1642C07 Length = 206004 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 200783 tactccctccatttctaaatat 200762
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 36308 tactccctccatttctaaatat 36287
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 499 gcttgtactccctccatttctaaatataaa 528 |||| |||||||||| |||||||||||||| Sbjct: 150735 gcttatactccctccgtttctaaatataaa 150764
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1329D01 Length = 141938 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 3813 tactccctccatttctaaatat 3792
>emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083D01, complete sequence Length = 148353 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 59159 tactccctccatttctaaatat 59180
>gb|AC134437.3| Mus musculus BAC clone RP24-450H12 from chromosome 19, complete sequence Length = 171749 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 29927 atgctagagaggtgaggcagga 29948
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 114794 tactccctccatttctaaatat 114773
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 107869 tactccctccatttctaaatat 107848
>dbj|AP006267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0004F07 Length = 135890 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 113986 tactccctccatttctaaatat 114007
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 101368 tactccctccatttctaaatat 101347
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 95098 tactccctccatttctaaatat 95119
>dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0610D01 Length = 146418 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 5453 tactccctccatttctaaatat 5432
>dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456F09 Length = 141336 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 52755 tactccctccatttctaaatat 52776
>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062E01 Length = 161804 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 146303 tactccctccatttctaaatat 146282
>dbj|AP006454.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1472F02 Length = 55065 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 31417 tactccctccatttctaaatat 31396
>dbj|AP005770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0065F08 Length = 144091 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 115968 tactccctccatttctaaatat 115947
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 49786 tactccctccatttctaaatat 49765
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 50334 tactccctccatttctaaatat 50355
>dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_B05 Length = 117057 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 13708 tactccctccatttctaaatat 13687
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 128720 tactccctccatttctaaatat 128741
>dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0016E03 Length = 152934 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 85604 tactccctccatttctaaatat 85583
>dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0613B07 Length = 191756 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 10080 tactccctccatttctaaatat 10101
>dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1100H02 Length = 128773 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 25104 tactccctccatttctaaatat 25125
>dbj|AP005063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016I05 Length = 140933 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 112958 tactccctccatttctaaatat 112979
>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0639B07 Length = 138780 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 76615 tactccctccatttctaaatat 76636
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 64967 tactccctccatttctaaatat 64946
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12 Length = 132736 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 17098 tactccctccatttctaaatat 17077
>dbj|AP005696.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0063K04 Length = 158792 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 125162 tactccctccatttctaaatat 125183
>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1188_F05 Length = 117045 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 63902 tactccctccatttctaaatat 63923
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 70368 tactccctccatttctaaatat 70389
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 12904 tactccctccatttctaaatat 12883
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 51760 tactccctccatttctaaatat 51739
>dbj|AK065848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041B11, full insert sequence Length = 3895 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 1137 tactccctccatttctaaatat 1158
>gb|AC131177.9| Mus musculus chromosome 1, clone RP23-374I10, complete sequence Length = 189761 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1003 agaatagaatttacatattctaaaat 1028 ||||||||||||||||||| |||||| Sbjct: 173682 agaatagaatttacatattttaaaat 173707
>emb|AL935071.4|CNS08CCN Oryza sativa chromosome 12, . BAC OSJNBb0016C24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 87778 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 72561 tactccctccatttctaaatat 72582
>emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa0042B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145118 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 142855 tactccctccatttctaaatat 142876
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaat 529 ||||||||||||||| |||||||||| Sbjct: 31779 tactccctccatttcaaaatataaat 31754
>dbj|AB086078.1| Oryza sativa (indica cultivar-group) DNA, retroposon p-SINE1-r57 Length = 724 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 66 tactccctccatttctaaatat 87
>gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, complete sequence Length = 187014 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 38254 atgctagagaggtgaggcagga 38233
>gb|AC124636.23| Mus musculus chromosome 16, clone RP23-454J20, complete sequence Length = 187247 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 41980 atgctagagaggtgaggcagga 42001
>gb|AC174450.2| Mus musculus BAC clone RP23-116E13 from chromosome 13, complete sequence Length = 200641 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 50696 atgctagagaggtgaggcagga 50675
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 565 tatgtctatatacattcgtatgtagt 590 ||||||||||||||| |||||||||| Sbjct: 3822 tatgtctatatacatccgtatgtagt 3797
>emb|AL954157.3|CNS08CCV Oryza sativa chromosome 12, . BAC OSJNBa0042N11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168699 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 6391 tactccctccatttctaaatat 6370
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127026 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 81160 tactccctccatttctaaatat 81181
>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129155 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 106673 tactccctccatttctaaatat 106652
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaata 524 |||||||||||||||||||||| Sbjct: 60122 gtactccctccatttctaaata 60143
>emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G11 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155451 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatat 525 |||||||||||||||||||||| Sbjct: 124913 tactccctccatttctaaatat 124934
>emb|CT030726.4| Mouse DNA sequence from clone RP24-465G11 on chromosome 13, complete sequence Length = 156720 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 107182 atgctagagaggtgaggcagga 107161
>gb|AC117715.10| Mus musculus chromosome 7, clone RP23-62M19, complete sequence Length = 234594 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 186404 atgctagagaggtgaggcagga 186425
>emb|AL772336.5| Mouse DNA sequence from clone RP23-180H12 on chromosome 4, complete sequence Length = 154034 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 atgctagagaggtgaggcagga 292 |||||||||||||||||||||| Sbjct: 90215 atgctagagaggtgaggcagga 90236
>emb|AL355176.10| Mouse DNA sequence from clone RP21-505L19 on chromosome 5, complete sequence Length = 151349 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 ttcatagataaaactgaaatga 420 |||||||||||||||||||||| Sbjct: 108421 ttcatagataaaactgaaatga 108400
>gb|AC186643.3| Medicago truncatula chromosome 2 BAC clone mth2-58f20, complete sequence Length = 117086 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 |||||||||| |||||||||||||| Sbjct: 441 tactccctccgtttctaaatataaa 465
>ref|XM_001014197.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00225660) mRNA, complete cds Length = 2901 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 609 aaaagacttataattagtaac 629 ||||||||||||||||||||| Sbjct: 581 aaaagacttataattagtaac 601
>gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 409D13 and BAC 916O17, complete sequence Length = 245486 Score = 42.1 bits (21), Expect = 5.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 |||||||| |||| ||||||||||| |||| |||| |||||||| Sbjct: 152132 tagtgaaatctctccaaagacttatatttaggaacggagggagta 152088
>gb|DQ995511.1| Hordeum vulgare clone 509d02_c-84 genomic sequence Length = 13774 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 556 actctaatgtatgtctatatacattcgtatgta 588 ||||||| |||||||||||||||| ||| |||| Sbjct: 9128 actctaaagtatgtctatatacatccgtttgta 9160
>emb|CR855053.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0101K10, complete sequence Length = 104269 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatat 525 ||||||||||||| ||||||||||| Sbjct: 24359 ttgtactccctccgtttctaaatat 24383
>gb|AC182682.2| Populus trichocarpa clone Pop1-33J5, complete sequence Length = 124620 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 tattcaacttcctcaaataac 658 ||||||||||||||||||||| Sbjct: 66976 tattcaacttcctcaaataac 66956
>emb|CT009587.1| Triticum turgidum Length = 229209 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 |||||| |||||||||||||||||| Sbjct: 17112 gtactcactccatttctaaatataa 17088
>gb|AC154113.1| Medicago truncatula chromosome 2 BAC clone mte1-25a23, complete sequence Length = 42983 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 ||||||||||| ||||||||||||| Sbjct: 17767 gtactccctccgtttctaaatataa 17743
>gb|AC136503.46| Medicago truncatula clone mth2-15n1, complete sequence Length = 117475 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 ||||||||||| ||||||||||||| Sbjct: 71593 gtactccctccgtttctaaatataa 71569
>gb|AC151727.27| Medicago truncatula clone mth2-25p23, complete sequence Length = 123526 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 |||||| |||||||||||||||||| Sbjct: 36092 tactccttccatttctaaatataaa 36116
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 598 tgaaagctctaaaaagacttataattagtaacg 630 ||||| ||||||||||||||||| |||| |||| Sbjct: 260199 tgaaatctctaaaaagacttatatttaggaacg 260167
>gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete sequence Length = 104281 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 |||||||||| |||||||||||||| Sbjct: 25465 tactccctccgtttctaaatataaa 25489
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 ||||||||||||||| ||||||||| Sbjct: 111397 tactccctccatttccaaatataaa 111421
>gb|AC126014.6| Medicago truncatula clone mth2-18j5, complete sequence Length = 113200 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 ||||||||| ||||||||||||||| Sbjct: 50546 tactccctctatttctaaatataaa 50570
>gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete sequence Length = 120527 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 ||||||||||||||| ||||||||| Sbjct: 42280 gtactccctccatttttaaatataa 42256
>gb|AC133946.3| Mus musculus BAC clone RP24-188D7 from chromosome 17, complete sequence Length = 170090 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 706 cttcctctttggagtcaacttcttt 730 |||||||||| |||||||||||||| Sbjct: 103793 cttcctctttagagtcaacttcttt 103769
>gb|DQ178619.1| Homo sapiens RAB38, member RAS oncogene family (RAB38) gene, complete cds Length = 65550 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 992 atgaaccatgcagaatagaat 1012 ||||||||||||||||||||| Sbjct: 33415 atgaaccatgcagaatagaat 33395
>gb|AC135422.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0043H23, complete sequence Length = 134097 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaat 523 ||||||||||||||||||||| Sbjct: 21616 gtactccctccatttctaaat 21596
>gb|AC146716.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1003C08, complete sequence Length = 152527 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaat 523 ||||||||||||||||||||| Sbjct: 57094 gtactccctccatttctaaat 57074
>gb|AC122359.5| Mus musculus BAC clone RP23-421B1 from chromosome 6, complete sequence Length = 194338 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 868 tgagcatatattcagaagatt 888 ||||||||||||||||||||| Sbjct: 41438 tgagcatatattcagaagatt 41418
>gb|AC116178.4| Mus musculus BAC clone RP23-28O18 from 14, complete sequence Length = 195306 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 agctcatggctcaaggatatt 461 ||||||||||||||||||||| Sbjct: 161961 agctcatggctcaaggatatt 161981
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence Length = 172016 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 ||||||||||| ||||||||||||| Sbjct: 123748 gtactccctccgtttctaaatataa 123724
>gb|AC163681.3| Mus musculus BAC clone RP24-113I15 from chromosome 14, complete sequence Length = 192183 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 agctcatggctcaaggatatt 461 ||||||||||||||||||||| Sbjct: 23923 agctcatggctcaaggatatt 23943
>gb|AC144343.8| Medicago truncatula clone mth2-12c21, complete sequence Length = 130740 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 ||||||||||||||| ||||||||| Sbjct: 125655 tactccctccatttcaaaatataaa 125679
>gb|AC123575.10| Medicago truncatula clone mth1-31p6, complete sequence Length = 83007 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaatataa 527 ||||||| ||||||||||||||||| Sbjct: 34513 gtactccatccatttctaaatataa 34537
>gb|AC139707.10| Medicago truncatula clone mth2-16b22, complete sequence Length = 113689 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 ||||||||||||||| ||||||||| Sbjct: 16718 tactccctccatttcaaaatataaa 16742
>gb|AC068909.31| Mus musculus BAC Clone 407f20 RPCI-23, complete sequence Length = 196383 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 868 tgagcatatattcagaagatt 888 ||||||||||||||||||||| Sbjct: 2947 tgagcatatattcagaagatt 2967
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 828 tacaatgaaatgaatgtgttg 848 ||||||||||||||||||||| Sbjct: 982464 tacaatgaaatgaatgtgttg 982484
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 42.1 bits (21), Expect = 5.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 |||||||| | || |||||||||||| |||| |||| |||||||| Sbjct: 861 tagtgaaatcgcttaaaagacttatatttaggaacggagggagta 817
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 605 tctaaaaagacttataattagtaacgaagggag 637 |||||||||||||||| |||| |||| |||||| Sbjct: 1343 tctaaaaagacttatatttaggaacggagggag 1375
>emb|CR956392.5| M.truncatula DNA sequence from clone MTH2-52P12 on chromosome 3, complete sequence Length = 115163 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaa 528 |||||||||| |||||||||||||| Sbjct: 101284 tactccctccgtttctaaatataaa 101260
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaata 524 ||||||||||||||||||||| Sbjct: 92806 tactccctccatttctaaata 92826
>gb|AC110792.3| Homo sapiens BAC clone RP11-571I18 from 4, complete sequence Length = 170202 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 515 tttctaaatataaatctttctaaag 539 ||||||||| ||||||||||||||| Sbjct: 25566 tttctaaatctaaatctttctaaag 25542
>dbj|AP008242.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT22D23, TM0409, complete sequence Length = 93754 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 755 tgtagttgttgttacttgtga 775 ||||||||||||||||||||| Sbjct: 52875 tgtagttgttgttacttgtga 52855
>emb|AL603844.7| Human DNA sequence from clone RP11-541I21 on chromosome 1, complete sequence Length = 220185 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 850 ttctcattttcatattgttga 870 ||||||||||||||||||||| Sbjct: 192289 ttctcattttcatattgttga 192309
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 |||||||||||||||| |||||||| Sbjct: 44907 gtactccctccatttcaaaatataa 44883
>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0707D10 Length = 172003 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaatataa 527 |||||||||||||||| |||||||| Sbjct: 21967 gtactccctccatttcaaaatataa 21991
>emb|Y10814.1|HVPRP4 H.vulgare mRNA for pathogenic related protein 4 Length = 728 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatataaatcttt 533 ||||||||||||| | ||||||||||| ||||| Sbjct: 635 ttgtactccctccgtatctaaatataagtcttt 667
>emb|CR936324.2| Medicago truncatula chromosome 5 clone mth2-62a22, COMPLETE SEQUENCE Length = 121881 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 |||||||||| |||||||||||||| Sbjct: 3444 gtactccctctatttctaaatataa 3420
>emb|CR932958.2| Medicago truncatula chromosome 5 clone mth2-174i23, COMPLETE SEQUENCE Length = 122746 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 ||||||||||||||| ||||||||| Sbjct: 48946 gtactccctccatttttaaatataa 48922
>emb|CR932962.2| Medicago truncatula chromosome 5 clone mte1-70c24, COMPLETE SEQUENCE Length = 128704 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 |||||||||| |||||||||||||| Sbjct: 59625 tactccctccgtttctaaatataaa 59649
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 ||||||||||||||| ||||||||| Sbjct: 156536 tactccctccatttcaaaatataaa 156560
>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0503G09 Length = 59843 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 ||||||||||||||| ||||||||| Sbjct: 27231 tactccctccatttcaaaatataaa 27255
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 42.1 bits (21), Expect = 5.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 595 tagtgaaagctctaaaaagacttataattagtaacgaagggagta 639 ||||| || ||||| ||||||||||| |||| |||| |||||||| Sbjct: 8611 tagtggaatctctacaaagacttatatttaggaacggagggagta 8567
>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12 map MAP_LOC, complete sequence Length = 167323 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 497 tagcttgtactccctccatttctaaatat 525 ||||| ||||||||||| ||||||||||| Sbjct: 13406 tagctagtactccctccgtttctaaatat 13378
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0092C08 Length = 131049 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 491 cacttgtagcttgtactccctccat 515 |||||||| |||||||||||||||| Sbjct: 30173 cacttgtatcttgtactccctccat 30149
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 491 cacttgtagcttgtactccctccat 515 |||||||| |||||||||||||||| Sbjct: 148569 cacttgtatcttgtactccctccat 148545
>dbj|AP007254.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa211K08 Length = 41043 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 |||||||||||||||| |||||||| Sbjct: 33401 gtactccctccatttcaaaatataa 33377
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatat 525 |||||||||||||||||||| |||| Sbjct: 60535 ttgtactccctccatttctacatat 60559
>gb|AC125473.12| Medicago truncatula clone mth2-8j13, complete sequence Length = 103966 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaa 528 ||||||||| ||||||||||||||| Sbjct: 49092 tactccctctatttctaaatataaa 49068
>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510C12 Length = 177049 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 gtactccctccatttctaaatataa 527 |||||||||||||||| |||||||| Sbjct: 165824 gtactccctccatttcaaaatataa 165848
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaatctttcta 536 ||||||||||||||| |||||||||| ||||| Sbjct: 32375 tactccctccatttcacaatataaatcattcta 32407
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 tactccctccatttctaaata 524 ||||||||||||||||||||| Sbjct: 97410 tactccctccatttctaaata 97390
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 497 tagcttgtactccctccatttctaaatat 525 ||||| ||||||||||| ||||||||||| Sbjct: 56145 tagctagtactccctccttttctaaatat 56173
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaata 524 ||||||||||||||||||||| Sbjct: 64240 tactccctccatttctaaata 64260
>dbj|AP004992.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0022O02 Length = 176625 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 ||||||||||||||| ||||||||| Sbjct: 112068 tactccctccatttcaaaatataaa 112092 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 502 tgtactccctccatttctaaatata 526 ||||||||||||||||| ||||||| Sbjct: 112309 tgtactccctccatttcaaaatata 112285
>dbj|AP005322.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0677G01 Length = 137031 Score = 42.1 bits (21), Expect = 5.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 500 cttgtactccctccatttctaaatataaatctttcta 536 ||||||||||||||||||| ||||||| || ||||| Sbjct: 31530 cttgtactccctccatttcacaatataagtcattcta 31494
>dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0498F03 Length = 54025 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 |||||||||||||||| |||||||| Sbjct: 50910 gtactccctccatttcaaaatataa 50886
>dbj|AP005863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0040N23 Length = 101061 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaatctttcta 536 ||||||||||||||| |||||||| ||||||| Sbjct: 20174 tactccctccatttcataatataaaactttcta 20142
>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_F06 Length = 130968 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatat 525 ||||||||||||||||| ||||||| Sbjct: 64148 ttgtactccctccatttttaaatat 64172
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaatctttcta 536 ||||||||||||||| |||||||| ||||||| Sbjct: 187852 tactccctccatttcataatataaaactttcta 187820
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 501 ttgtactccctccatttctaaatat 525 ||||||||||||||||| ||||||| Sbjct: 8673 ttgtactccctccatttttaaatat 8697
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 tactccctccatttctaaata 524 ||||||||||||||||||||| Sbjct: 115821 tactccctccatttctaaata 115841
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0061L20 Length = 138926 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 actccctccatttctaaatat 525 ||||||||||||||||||||| Sbjct: 96309 actccctccatttctaaatat 96289
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 actccctccatttctaaatat 525 ||||||||||||||||||||| Sbjct: 23405 actccctccatttctaaatat 23385
>dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT13E04, TM0314, complete sequence Length = 126349 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 615 cttataattagtaacgaagggagta 639 ||||||||||| ||||||||||||| Sbjct: 26849 cttataattaggaacgaagggagta 26825
>dbj|AP004937.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT08M07, TM0096a, complete sequence Length = 24390 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 615 cttataattagtaacgaagggagta 639 ||||||||||| ||||||||||||| Sbjct: 17239 cttataattaggaacgaagggagta 17263
>dbj|AP001642.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-685B24, complete sequences Length = 72000 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 992 atgaaccatgcagaatagaat 1012 ||||||||||||||||||||| Sbjct: 25970 atgaaccatgcagaatagaat 25990
>gb|AC155888.2| Medicago truncatula chromosome 7 BAC clone mth2-30a12, complete sequence Length = 104265 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 615 cttataattagtaacgaagggagta 639 ||||||||||||||||||| ||||| Sbjct: 68998 cttataattagtaacgaagagagta 68974
>gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete sequence Length = 129518 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tactccctccatttctaaatataaa 528 |||||| |||||||||||||||||| Sbjct: 78243 tactccttccatttctaaatataaa 78267
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1354 gcagcgcgcgctgaacgacgt 1374 ||||||||||||||||||||| Sbjct: 118245 gcagcgcgcgctgaacgacgt 118225
>gb|AC161034.23| Medicago truncatula clone mth2-53o24, complete sequence Length = 128806 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 gtactccctccatttctaaatataa 527 |||||||||||||||| |||||||| Sbjct: 61371 gtactccctccatttcaaaatataa 61347
>emb|AL935211.7| Zebrafish DNA sequence from clone CH211-227L1, complete sequence Length = 152485 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1011 atttacatattctaaaatttccctt 1035 |||||||| |||||||||||||||| Sbjct: 498 atttacattttctaaaatttccctt 522
>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02, complete sequence Length = 121337 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaatctttcta 536 |||||||||||||| |||||||||| |||||| Sbjct: 115984 tactccctccattttaaaatataaatatttcta 115952
>gb|AC168881.3| Mus musculus BAC clone RP23-170A19 from chromosome 13, complete sequence Length = 212206 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 662 agcatcaatttcgtagagatc 682 ||||||||||||||||||||| Sbjct: 153594 agcatcaatttcgtagagatc 153614
>emb|AL732538.6| Mouse DNA sequence from clone RP23-242O9 on chromosome 4, complete sequence Length = 172802 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1010 aatttacatattctaaaattt 1030 ||||||||||||||||||||| Sbjct: 127072 aatttacatattctaaaattt 127092
>dbj|D38221.1|RICE1 Rice gene for soluble starch synthase (SSS1), complete cds (exon1-15) Length = 8900 Score = 42.1 bits (21), Expect = 5.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 504 tactccctccatttctaaatataaatctttcta 536 ||||||||||||||| |||||||||| ||||| Sbjct: 8765 tactccctccatttcacaatataaatcattcta 8733 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 270,146,337 Number of extensions: 14911748 Number of successful extensions: 317077 Number of sequences better than 10.0: 251 Number of HSP's gapped: 317063 Number of HSP's successfully gapped: 389 Length of query: 1503 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1480 Effective length of database: 18,503,978,556 Effective search space: 27385888262880 Effective search space used: 27385888262880 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
