Clone Name | FLbaf90g20 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_001059763.1| Oryza sativa (japonica cultivar-group) Os04g0501200 (Os04g0501200) mRNA, partial cds Length = 1832 Score = 735 bits (371), Expect = 0.0 Identities = 740/863 (85%) Strand = Plus / Plus Query: 197 aagaagcctgctgcggtgcctacattgctcccttcgctcagcgtgccggcaggaatgcgc 256 |||||||| || |||||||| |||||||| || |||||||| ||||||||||| |||||| Sbjct: 619 aagaagcccgccgcggtgcccacattgctgccctcgctcagtgtgccggcagggatgcgc 678 Query: 257 cggcaggagctgctactgcgctcagggttctctcttgatgcctcatgctcatcagacgct 316 ||||||||||||| |||||||| ||| | || || || || || ||||| || ||||| Sbjct: 679 aggcaggagctgctgctgcgctcggggctgtcgctcgacgcgtcgtgctcgtcggacgca 738 Query: 317 tcgacagactccttctgcagccgggcatccactgggcggattggaaggccggtgtttggg 376 || || ||||| |||||||||||||| ||||| ||||||||||| |||||| ||||||| Sbjct: 739 tccacggactcgttctgcagccgggcgtccacggggcggattgggaggccgacgtttggg 798 Query: 377 ccgaggaagaagaagaccgtctcccaggctgatcataaagtctctgccatgctggaaagg 436 | |||||||||||||| ||| ||| ||||||| || | | |||||||||||||| Sbjct: 799 gctaggaagaagaagactctctgtcagactgatcacaagattgtttccatgctggaaagg 858 Query: 437 gaggcaggatctgcttctccaagtgatgcttctggtctgaagaggaggtgtgcttgggtg 496 |||| |||| |||||| | | ||||| |||||||||||||||||||| | |||||| Sbjct: 859 gaggttggattggcttctgctaatgatgtgcctggtctgaagaggaggtgttcatgggtg 918 Query: 497 actgctaataccgatccatgttatgttgcatttcatgacgaagaatggggagttccagtt 556 || |||||||| || || ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 919 acagctaatactgaaccctgttatgctgcatttcatgacgaagaatggggagttccagtt 978 Query: 557 catgacgacaagaagttgtttgagttactggtgctctcgggttcactggctgaacttact 616 ||||| |||||| |||||||||||| ||||||||||| ||| || ||||||||||||| Sbjct: 979 catgatgacaaggtgttgtttgagttgctggtgctctcaggtgcattggctgaacttaca 1038 Query: 617 tggccaacaattttgaacaggagatctatattcagggaggttttcatggattttgaccct 676 |||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 1039 tggccaacaattctgaacaagagacctatattcagggaggttttcatggattttgaccct 1098 Query: 677 tcattggtctctgagttaagtgagaggaagattattgcacctggaagtccgagcagctcc 736 |||||||||| | ||||||| | |||||||||||||||||||||||| ||||| || Sbjct: 1099 gtattggtctctaaactaagtgaaaagaagattattgcacctggaagtcctagcagtacc 1158 Query: 737 ttgttatctgaacagaaattgcgcggtgttattgagaatgcccgacaaatactgaaggtt 796 |||||||||||||| ||| |||| ||||| ||||| ||||| || |||||||| ||| || Sbjct: 1159 ttgttatctgaacaaaaactgcgtggtgtcattgaaaatgcacgccaaatactcaagatt 1218 Query: 797 atagaggagtttgggtcatttgataagtactgctggagctttgtgaaccacagacctata 856 ||||||||||||| | ||||||||||| || ||||||||||||||| ||| |||||| Sbjct: 1219 gtagaggagtttggaacgtttgataagtattgttggagctttgtgaacaacaaacctatt 1278 Query: 857 ttgagcacattcaggtatccccgtcaggttcctgtcaagacatctaaagcggacgcaata 916 ||||||| ||||||||||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1279 ttgagcagattcaggtatccccgccaggttcctgtcaaaacatctaaagcggatgcgata 1338 Query: 917 agcaaagatttggtccgaaggggtttccgtagcgtaggcccaacggtcgtgtacaccttc 976 |||||||||||||| || ||||| |||||||||||||||||||| || || ||||| || Sbjct: 1339 agcaaagatttggttcgcagggggttccgtagcgtaggcccaacagttgtctacacgttt 1398 Query: 977 atgcaagtctccggcatgacgaacgaccaccttgtctcctgctaccggtttgctgaatgc 1036 |||||||| || |||||||| || |||||| | |||||||||||||||||||||||||| Sbjct: 1399 atgcaagtttcaggcatgaccaatgaccacttgatctcctgctaccggtttgctgaatgc 1458 Query: 1037 gccgcagccgcaaccggtgctaa 1059 || || || ||||| ||| |||| Sbjct: 1459 gctgctgcagcaactggttctaa 1481 Score = 127 bits (64), Expect = 1e-25 Identities = 126/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 25 cgcaatgtccgggtctagctcgaggggtcggctctcgcccgcgtccggtggcgg---aga 81 ||||||||||||| ||| | ||||||| ||||||||||| || ||||| ||||| ||| Sbjct: 450 cgcaatgtccggggctaacgcgagggggcggctctcgccggcttccggcggcggtggaga 509 Query: 82 ctctgagccgcggtctgcggggagcaggacacgatctgtgtctgctacccggggccggaa 141 |||||||||||||||||||||||||||||| || || || || ||||| |||| ||||| Sbjct: 510 ctctgagccgcggtctgcggggagcaggacgcggtcggtttccgctacaaggggacggaa 569 Query: 142 ggcgtcaccgaggcctgggagggatg 167 | |||| ||||||||||||||||||| Sbjct: 570 gccgtcgccgaggcctgggagggatg 595 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1305 gcatgtaatgatgtatattcttt 1327 ||||||||||||||||||||||| Sbjct: 1752 gcatgtaatgatgtatattcttt 1774
>dbj|AK069193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004E10, full insert sequence Length = 1831 Score = 735 bits (371), Expect = 0.0 Identities = 740/863 (85%) Strand = Plus / Plus Query: 197 aagaagcctgctgcggtgcctacattgctcccttcgctcagcgtgccggcaggaatgcgc 256 |||||||| || |||||||| |||||||| || |||||||| ||||||||||| |||||| Sbjct: 618 aagaagcccgccgcggtgcccacattgctgccctcgctcagtgtgccggcagggatgcgc 677 Query: 257 cggcaggagctgctactgcgctcagggttctctcttgatgcctcatgctcatcagacgct 316 ||||||||||||| |||||||| ||| | || || || || || ||||| || ||||| Sbjct: 678 aggcaggagctgctgctgcgctcggggctgtcgctcgacgcgtcgtgctcgtcggacgca 737 Query: 317 tcgacagactccttctgcagccgggcatccactgggcggattggaaggccggtgtttggg 376 || || ||||| |||||||||||||| ||||| ||||||||||| |||||| ||||||| Sbjct: 738 tccacggactcgttctgcagccgggcgtccacggggcggattgggaggccgacgtttggg 797 Query: 377 ccgaggaagaagaagaccgtctcccaggctgatcataaagtctctgccatgctggaaagg 436 | |||||||||||||| ||| ||| ||||||| || | | |||||||||||||| Sbjct: 798 gctaggaagaagaagactctctgtcagactgatcacaagattgtttccatgctggaaagg 857 Query: 437 gaggcaggatctgcttctccaagtgatgcttctggtctgaagaggaggtgtgcttgggtg 496 |||| |||| |||||| | | ||||| |||||||||||||||||||| | |||||| Sbjct: 858 gaggttggattggcttctgctaatgatgtgcctggtctgaagaggaggtgttcatgggtg 917 Query: 497 actgctaataccgatccatgttatgttgcatttcatgacgaagaatggggagttccagtt 556 || |||||||| || || ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 918 acagctaatactgaaccctgttatgctgcatttcatgacgaagaatggggagttccagtt 977 Query: 557 catgacgacaagaagttgtttgagttactggtgctctcgggttcactggctgaacttact 616 ||||| |||||| |||||||||||| ||||||||||| ||| || ||||||||||||| Sbjct: 978 catgatgacaaggtgttgtttgagttgctggtgctctcaggtgcattggctgaacttaca 1037 Query: 617 tggccaacaattttgaacaggagatctatattcagggaggttttcatggattttgaccct 676 |||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 1038 tggccaacaattctgaacaagagacctatattcagggaggttttcatggattttgaccct 1097 Query: 677 tcattggtctctgagttaagtgagaggaagattattgcacctggaagtccgagcagctcc 736 |||||||||| | ||||||| | |||||||||||||||||||||||| ||||| || Sbjct: 1098 gtattggtctctaaactaagtgaaaagaagattattgcacctggaagtcctagcagtacc 1157 Query: 737 ttgttatctgaacagaaattgcgcggtgttattgagaatgcccgacaaatactgaaggtt 796 |||||||||||||| ||| |||| ||||| ||||| ||||| || |||||||| ||| || Sbjct: 1158 ttgttatctgaacaaaaactgcgtggtgtcattgaaaatgcacgccaaatactcaagatt 1217 Query: 797 atagaggagtttgggtcatttgataagtactgctggagctttgtgaaccacagacctata 856 ||||||||||||| | ||||||||||| || ||||||||||||||| ||| |||||| Sbjct: 1218 gtagaggagtttggaacgtttgataagtattgttggagctttgtgaacaacaaacctatt 1277 Query: 857 ttgagcacattcaggtatccccgtcaggttcctgtcaagacatctaaagcggacgcaata 916 ||||||| ||||||||||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 1278 ttgagcagattcaggtatccccgccaggttcctgtcaaaacatctaaagcggatgcgata 1337 Query: 917 agcaaagatttggtccgaaggggtttccgtagcgtaggcccaacggtcgtgtacaccttc 976 |||||||||||||| || ||||| |||||||||||||||||||| || || ||||| || Sbjct: 1338 agcaaagatttggttcgcagggggttccgtagcgtaggcccaacagttgtctacacgttt 1397 Query: 977 atgcaagtctccggcatgacgaacgaccaccttgtctcctgctaccggtttgctgaatgc 1036 |||||||| || |||||||| || |||||| | |||||||||||||||||||||||||| Sbjct: 1398 atgcaagtttcaggcatgaccaatgaccacttgatctcctgctaccggtttgctgaatgc 1457 Query: 1037 gccgcagccgcaaccggtgctaa 1059 || || || ||||| ||| |||| Sbjct: 1458 gctgctgcagcaactggttctaa 1480 Score = 127 bits (64), Expect = 1e-25 Identities = 126/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 25 cgcaatgtccgggtctagctcgaggggtcggctctcgcccgcgtccggtggcgg---aga 81 ||||||||||||| ||| | ||||||| ||||||||||| || ||||| ||||| ||| Sbjct: 449 cgcaatgtccggggctaacgcgagggggcggctctcgccggcttccggcggcggtggaga 508 Query: 82 ctctgagccgcggtctgcggggagcaggacacgatctgtgtctgctacccggggccggaa 141 |||||||||||||||||||||||||||||| || || || || ||||| |||| ||||| Sbjct: 509 ctctgagccgcggtctgcggggagcaggacgcggtcggtttccgctacaaggggacggaa 568 Query: 142 ggcgtcaccgaggcctgggagggatg 167 | |||| ||||||||||||||||||| Sbjct: 569 gccgtcgccgaggcctgggagggatg 594 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1305 gcatgtaatgatgtatattcttt 1327 ||||||||||||||||||||||| Sbjct: 1751 gcatgtaatgatgtatattcttt 1773
>gb|AY104941.1| Zea mays PCO134527 mRNA sequence Length = 1026 Score = 490 bits (247), Expect = e-135 Identities = 496/579 (85%) Strand = Plus / Plus Query: 460 tgatgcttctggtctgaagaggaggtgtgcttgggtgactgctaataccgatccatgtta 519 ||||||| ||||| |||||||||||||||| |||||||| || ||||| ||||| ||||| Sbjct: 48 tgatgctgctggtgtgaagaggaggtgtgcgtgggtgacagcaaatactgatccttgtta 107 Query: 520 tgttgcatttcatgacgaagaatggggagttccagttcatgacgacaagaagttgtttga 579 | ||||||||| || ||||| ||||||||||| ||||| || |||| |||||| ||||| Sbjct: 108 ttctgcatttcacgatgaagagtggggagttcctgttcacgatgacaggaagttatttga 167 Query: 580 gttactggtgctctcgggttcactggctgaacttacttggccaacaattttgaacaggag 639 | | || || || || || || | |||||||| || |||||| ||||| |||| | ||| Sbjct: 168 gctgctagtactgtcaggggcattagctgaactgacatggccagcaattctgaataagag 227 Query: 640 atctatattcagggaggttttcatggattttgacccttcattggtctctgagttaagtga 699 | ||||||||||| |||||||||||||||||||| |||||| || |||||||||| Sbjct: 228 agacatattcagggaagttttcatggattttgacccagtattggtttcaaagttaagtga 287 Query: 700 gaggaagattattgcacctggaagtccgagcagctccttgttatctgaacagaaattgcg 759 || |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 288 gaagaagattattgcgcctggaagtcctagctgctccttgttatctgaacagaaattgcg 347 Query: 760 cggtgttattgagaatgcccgacaaatactgaaggttatagaggagtttgggtcatttga 819 ||||||||||| ||||| || |||||||| ||| | |||||||| ||||| |||||||| Sbjct: 348 tggtgttattgaaaatgcacgtcaaatactcaagatcatagaggaatttggatcatttga 407 Query: 820 taagtactgctggagctttgtgaaccacagacctatattgagcacattcaggtatccccg 879 ||| ||||| |||||||| |||||||||| ||||||||||||| ||||||||| |||| Sbjct: 408 taaatactgttggagcttcgtgaaccacaaacctatattgagccgattcaggtactcccg 467 Query: 880 tcaggttcctgtcaagacatctaaagcggacgcaataagcaaagatttggtccgaagggg 939 ||| || |||||||| ||||| ||||| || || ||||||||||| ||||| |||||||| Sbjct: 468 tcaagtgcctgtcaaaacatcgaaagcagatgccataagcaaagacttggttcgaagggg 527 Query: 940 tttccgtagcgtaggcccaacggtcgtgtacaccttcatgcaagtctccggcatgacgaa 999 |||||| || || |||||||| ||||| || ||||||||||||||||| |||||||| || Sbjct: 528 tttccgcagtgtcggcccaacagtcgtatataccttcatgcaagtctctggcatgactaa 587 Query: 1000 cgaccaccttgtctcctgctaccggtttgctgaatgcgc 1038 |||||||||| ||||||||||||| |||||||||||||| Sbjct: 588 cgaccaccttatctcctgctaccgttttgctgaatgcgc 626
>gb|BT018656.1| Zea mays clone EL01N0507C09.d mRNA sequence Length = 1577 Score = 450 bits (227), Expect = e-123 Identities = 680/827 (82%), Gaps = 3/827 (0%) Strand = Plus / Plus Query: 212 gtgcctacattgctcccttcgctcagcgtgccggcaggaatgcgccggcaggagctgcta 271 ||||| |||||||| || ||||| |||| ||| || || ||||| |||||||||||||| Sbjct: 353 gtgcccacattgctgccctcgcttagcgcgcccgcggggatgcgtcggcaggagctgctg 412 Query: 272 ctgcgctcagggttctctcttgatgcctcatgctcatcagacgcttcgacagactccttc 331 |||||||| || | ||||| || || || ||||| || ||||| || || ||||| ||| Sbjct: 413 ctgcgctcgggtctgtctctcgacgcgtcctgctcctcggacgcgtccacggactcgttc 472 Query: 332 tgcagccgggcatccactgggcggattggaaggccggtgtttgggccgaggaagaagaag 391 |||||||| |||||||| || |||||||| ||||||| ||||||| | |||||||||||| Sbjct: 473 tgcagccgagcatccacaggccggattgggaggccggcgtttggggctaggaagaagaag 532 Query: 392 accgtctcccaggctgatcataaagtctctg-ccatgctggaaagggaggcaggatctgc 450 ||| |||| ||| ||||| | || | || | |||||||||||||||||| |||| || Sbjct: 533 accctctctcagactgattacaa-gcctgtttccatgctggaaagggagggcggattggc 591 Query: 451 ttctccaagtgatgcttctggtctgaagaggaggtgtgcttgggtgactgctaataccga 510 || || | |||||| ||||| | ||||||||||| || |||||||| |||||| | Sbjct: 592 ttatcagaccgatgctgctggtgtcaagaggaggtgcgcatgggtgacc-ctaatagtgc 650 Query: 511 tccatgttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaagaa 570 ||| |||||| ||||||||| || ||| | ||||||||| ||||| || |||| ||| Sbjct: 651 tccttgttattctgcatttcacgatgaacccttgggagttcctgttcacgatgacaggaa 710 Query: 571 gttgtttgagttactggtgctctcgggttcactggctgaacttacttggccaacaatttt 630 ||| |||||| | || || || || || || | |||||||| || |||||| ||||| | Sbjct: 711 gttatttgagctgctagtactgtcaggggcattagctgaactgacatggccagcaattct 770 Query: 631 gaacaggagatctatattcagggaggttttcatggattttgacccttcattggtctctga 690 ||| | |||| ||||||||||| |||||||||||||||||||| || |||||| | Sbjct: 771 gaataagagagacatattcagggaagttttcatggattttgacccagtatcggtctcaaa 830 Query: 691 gttaagtgagaggaagattattgcacctggaagtccgagcagctccttgttatctgaaca 750 |||||||||| ||||||||| ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 831 attaagtgagaagaagattatcgcacctggaagccctagcagttccttgttatccgaaca 890 Query: 751 gaaattgcgcggtgttattgagaatgcccgacaaatactgaaggttatagaggagtttgg 810 |||| |||||||||||||||| || || || |||||||| ||| | |||||||| ||||| Sbjct: 891 gaaactgcgcggtgttattgaaaacgcacgccaaatactcaagatcatagaggaatttgg 950 Query: 811 gtcatttgataagtactgctggagctttgtgaaccacagacctatattgagcacattcag 870 || ||||| || ||||| |||||||| ||||| |||| ||||||||||||| ||||| Sbjct: 951 atcgtttgacaaatactgttggagcttcgtgaatcacaaacctatattgagccggttcag 1010 Query: 871 gtatccccgtcaggttcctgtcaagacatctaaagcggacgcaataagcaaagatttggt 930 ||| ||||||| || |||||||| ||||| ||||| ||||| ||||||||||| |||| Sbjct: 1011 gtactcccgtcaagtgcctgtcaaaacatcgaaagcagacgccataagcaaagacctggt 1070 Query: 931 ccgaaggggtttccgtagcgtaggcccaacggtcgtgtacaccttcatgcaagtctccgg 990 ||||||||||||||| ||||| |||||||||||||| || |||||||||||||||| || Sbjct: 1071 ccgaaggggtttccgcagcgtcggcccaacggtcgtttatcccttcatgcaagtctctgg 1130 Query: 991 catgacgaacgaccaccttgtctcctgctaccggtttgctgaatgcg 1037 |||||| ||||||| |||| ||||||||||||| ||||||||||||| Sbjct: 1131 catgactaacgacccccttatctcctgctaccgttttgctgaatgcg 1177 Score = 54.0 bits (27), Expect = 0.001 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1308 tgtaatgatgtatattctttgtgatgc 1334 ||||||||||||||||||||||||||| Sbjct: 1489 tgtaatgatgtatattctttgtgatgc 1515
>emb|CR855212.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0311C03, complete sequence Length = 82144 Score = 258 bits (130), Expect = 5e-65 Identities = 229/262 (87%) Strand = Plus / Plus Query: 798 tagaggagtttgggtcatttgataagtactgctggagctttgtgaaccacagacctatat 857 ||||||||||||| | ||||||||||| || ||||||||||||||| ||| |||||| | Sbjct: 24619 tagaggagtttggaacgtttgataagtattgttggagctttgtgaacaacaaacctattt 24678 Query: 858 tgagcacattcaggtatccccgtcaggttcctgtcaagacatctaaagcggacgcaataa 917 |||||| ||||||||||||||| |||||||||||||| |||||||||||||| || |||| Sbjct: 24679 tgagcagattcaggtatccccgccaggttcctgtcaaaacatctaaagcggatgcgataa 24738 Query: 918 gcaaagatttggtccgaaggggtttccgtagcgtaggcccaacggtcgtgtacaccttca 977 ||||||||||||| || ||||| |||||||||||||||||||| || || ||||| || | Sbjct: 24739 gcaaagatttggttcgcagggggttccgtagcgtaggcccaacagttgtctacacgttta 24798 Query: 978 tgcaagtctccggcatgacgaacgaccaccttgtctcctgctaccggtttgctgaatgcg 1037 ||||||| || |||||||| || |||||| | ||||||||||||||||||||||||||| Sbjct: 24799 tgcaagtttcaggcatgaccaatgaccacttaatctcctgctaccggtttgctgaatgcg 24858 Query: 1038 ccgcagccgcaaccggtgctaa 1059 | || || ||||| ||| |||| Sbjct: 24859 ctgctgcagcaactggttctaa 24880 Score = 180 bits (91), Expect = 9e-42 Identities = 256/311 (82%) Strand = Plus / Plus Query: 197 aagaagcctgctgcggtgcctacattgctcccttcgctcagcgtgccggcaggaatgcgc 256 |||||||| || |||||||| |||||||| || |||||||| ||||||||||| |||||| Sbjct: 22556 aagaagcccgccgcggtgcccacattgctgccctcgctcagtgtgccggcagggatgcgc 22615 Query: 257 cggcaggagctgctactgcgctcagggttctctcttgatgcctcatgctcatcagacgct 316 ||||||||||||| |||||||| ||| | || || || || || ||||| || ||||| Sbjct: 22616 aggcaggagctgctgctgcgctcggggctgtcgctcgacgcgtcgtgctcgtcggacgca 22675 Query: 317 tcgacagactccttctgcagccgggcatccactgggcggattggaaggccggtgtttggg 376 || || ||||| |||||||||||||| ||||| ||||||||||| |||||| ||||||| Sbjct: 22676 tccacggactcgttctgcagccgggcgtccacggggcggattgggaggccgacgtttggg 22735 Query: 377 ccgaggaagaagaagaccgtctcccaggctgatcataaagtctctgccatgctggaaagg 436 | |||||||||||||| ||| ||| ||||||| || | | |||||||||||||| Sbjct: 22736 gctaggaagaagaagactctctgtcagactgatcacaagattgtttccatgctggaaagg 22795 Query: 437 gaggcaggatctgcttctccaagtgatgcttctggtctgaagaggaggtgtgcttgggtg 496 |||| |||| |||||| | | ||||| |||||||||||||||||||| | |||||| Sbjct: 22796 gaggttggattggcttctgctaatgatgtgcctggtctgaagaggaggtgttcatgggtg 22855 Query: 497 actgctaatac 507 || |||||||| Sbjct: 22856 acagctaatac 22866 Score = 151 bits (76), Expect = 8e-33 Identities = 130/148 (87%) Strand = Plus / Plus Query: 649 cagggaggttttcatggattttgacccttcattggtctctgagttaagtgagaggaagat 708 |||||||||||||||||||||||||||| |||||||||| | ||||||| | |||||| Sbjct: 24155 cagggaggttttcatggattttgaccctctattggtctctaaactaagtgaaaagaagat 24214 Query: 709 tattgcacctggaagtccgagcagctccttgttatctgaacagaaattgcgcggtgttat 768 |||||||||||||||||| ||||| |||||||||||||||| ||| |||| ||||| || Sbjct: 24215 tattgcacctggaagtcctagcagtaccttgttatctgaacaaaaactgcgtggtgtcat 24274 Query: 769 tgagaatgcccgacaaatactgaaggtt 796 ||| ||||| || |||||||| |||||| Sbjct: 24275 tgaaaatgcacgccaaatactcaaggtt 24302 Score = 127 bits (64), Expect = 1e-25 Identities = 126/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 25 cgcaatgtccgggtctagctcgaggggtcggctctcgcccgcgtccggtggcgg---aga 81 ||||||||||||| ||| | ||||||| ||||||||||| || ||||| ||||| ||| Sbjct: 22387 cgcaatgtccggggctaacgcgagggggcggctctcgccggcttccggcggcggtggaga 22446 Query: 82 ctctgagccgcggtctgcggggagcaggacacgatctgtgtctgctacccggggccggaa 141 |||||||||||||||||||||||||||||| || || || || ||||| |||| ||||| Sbjct: 22447 ctctgagccgcggtctgcggggagcaggacgcggtcggtttccgctacaaggggacggaa 22506 Query: 142 ggcgtcaccgaggcctgggagggatg 167 | |||| ||||||||||||||||||| Sbjct: 22507 gccgtcgccgaggcctgggagggatg 22532 Score = 99.6 bits (50), Expect = 3e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 571 gttgtttgagttactggtgctctcgggttcactggctgaacttacttggccaacaatttt 630 |||||||||||| ||||||||||| ||| || ||||||||||||| |||||||||||| | Sbjct: 23991 gttgtttgagttgctggtgctctcaggtgcattggctgaacttacatggccaacaattct 24050 Query: 631 gaacaggagatctatattcagg 652 ||||| |||| ||||||||||| Sbjct: 24051 gaacaagagacctatattcagg 24072 Score = 91.7 bits (46), Expect = 6e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 515 tgttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaag 568 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 23852 tgttatgctgcatttcatgacgaagaatggggagttccagttcatgatgacaag 23905 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1305 gcatgtaatgatgtatattcttt 1327 ||||||||||||||||||||||| Sbjct: 25151 gcatgtaatgatgtatattcttt 25173
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 258 bits (130), Expect = 5e-65 Identities = 229/262 (87%) Strand = Plus / Plus Query: 798 tagaggagtttgggtcatttgataagtactgctggagctttgtgaaccacagacctatat 857 ||||||||||||| | ||||||||||| || ||||||||||||||| ||| |||||| | Sbjct: 123194 tagaggagtttggaacgtttgataagtattgttggagctttgtgaacaacaaacctattt 123253 Query: 858 tgagcacattcaggtatccccgtcaggttcctgtcaagacatctaaagcggacgcaataa 917 |||||| ||||||||||||||| |||||||||||||| |||||||||||||| || |||| Sbjct: 123254 tgagcagattcaggtatccccgccaggttcctgtcaaaacatctaaagcggatgcgataa 123313 Query: 918 gcaaagatttggtccgaaggggtttccgtagcgtaggcccaacggtcgtgtacaccttca 977 ||||||||||||| || ||||| |||||||||||||||||||| || || ||||| || | Sbjct: 123314 gcaaagatttggttcgcagggggttccgtagcgtaggcccaacagttgtctacacgttta 123373 Query: 978 tgcaagtctccggcatgacgaacgaccaccttgtctcctgctaccggtttgctgaatgcg 1037 ||||||| || |||||||| || |||||| | ||||||||||||||||||||||||||| Sbjct: 123374 tgcaagtttcaggcatgaccaatgaccacttaatctcctgctaccggtttgctgaatgcg 123433 Query: 1038 ccgcagccgcaaccggtgctaa 1059 | || || ||||| ||| |||| Sbjct: 123434 ctgctgcagcaactggttctaa 123455 Score = 180 bits (91), Expect = 9e-42 Identities = 256/311 (82%) Strand = Plus / Plus Query: 197 aagaagcctgctgcggtgcctacattgctcccttcgctcagcgtgccggcaggaatgcgc 256 |||||||| || |||||||| |||||||| || |||||||| ||||||||||| |||||| Sbjct: 121131 aagaagcccgccgcggtgcccacattgctgccctcgctcagtgtgccggcagggatgcgc 121190 Query: 257 cggcaggagctgctactgcgctcagggttctctcttgatgcctcatgctcatcagacgct 316 ||||||||||||| |||||||| ||| | || || || || || ||||| || ||||| Sbjct: 121191 aggcaggagctgctgctgcgctcggggctgtcgctcgacgcgtcgtgctcgtcggacgca 121250 Query: 317 tcgacagactccttctgcagccgggcatccactgggcggattggaaggccggtgtttggg 376 || || ||||| |||||||||||||| ||||| ||||||||||| |||||| ||||||| Sbjct: 121251 tccacggactcgttctgcagccgggcgtccacggggcggattgggaggccgacgtttggg 121310 Query: 377 ccgaggaagaagaagaccgtctcccaggctgatcataaagtctctgccatgctggaaagg 436 | |||||||||||||| ||| ||| ||||||| || | | |||||||||||||| Sbjct: 121311 gctaggaagaagaagactctctgtcagactgatcacaagattgtttccatgctggaaagg 121370 Query: 437 gaggcaggatctgcttctccaagtgatgcttctggtctgaagaggaggtgtgcttgggtg 496 |||| |||| |||||| | | ||||| |||||||||||||||||||| | |||||| Sbjct: 121371 gaggttggattggcttctgctaatgatgtgcctggtctgaagaggaggtgttcatgggtg 121430 Query: 497 actgctaatac 507 || |||||||| Sbjct: 121431 acagctaatac 121441 Score = 151 bits (76), Expect = 8e-33 Identities = 130/148 (87%) Strand = Plus / Plus Query: 649 cagggaggttttcatggattttgacccttcattggtctctgagttaagtgagaggaagat 708 |||||||||||||||||||||||||||| |||||||||| | ||||||| | |||||| Sbjct: 122730 cagggaggttttcatggattttgaccctctattggtctctaaactaagtgaaaagaagat 122789 Query: 709 tattgcacctggaagtccgagcagctccttgttatctgaacagaaattgcgcggtgttat 768 |||||||||||||||||| ||||| |||||||||||||||| ||| |||| ||||| || Sbjct: 122790 tattgcacctggaagtcctagcagtaccttgttatctgaacaaaaactgcgtggtgtcat 122849 Query: 769 tgagaatgcccgacaaatactgaaggtt 796 ||| ||||| || |||||||| |||||| Sbjct: 122850 tgaaaatgcacgccaaatactcaaggtt 122877 Score = 127 bits (64), Expect = 1e-25 Identities = 126/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 25 cgcaatgtccgggtctagctcgaggggtcggctctcgcccgcgtccggtggcgg---aga 81 ||||||||||||| ||| | ||||||| ||||||||||| || ||||| ||||| ||| Sbjct: 120962 cgcaatgtccggggctaacgcgagggggcggctctcgccggcttccggcggcggtggaga 121021 Query: 82 ctctgagccgcggtctgcggggagcaggacacgatctgtgtctgctacccggggccggaa 141 |||||||||||||||||||||||||||||| || || || || ||||| |||| ||||| Sbjct: 121022 ctctgagccgcggtctgcggggagcaggacgcggtcggtttccgctacaaggggacggaa 121081 Query: 142 ggcgtcaccgaggcctgggagggatg 167 | |||| ||||||||||||||||||| Sbjct: 121082 gccgtcgccgaggcctgggagggatg 121107 Score = 99.6 bits (50), Expect = 3e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 571 gttgtttgagttactggtgctctcgggttcactggctgaacttacttggccaacaatttt 630 |||||||||||| ||||||||||| ||| || ||||||||||||| |||||||||||| | Sbjct: 122566 gttgtttgagttgctggtgctctcaggtgcattggctgaacttacatggccaacaattct 122625 Query: 631 gaacaggagatctatattcagg 652 ||||| |||| ||||||||||| Sbjct: 122626 gaacaagagacctatattcagg 122647 Score = 91.7 bits (46), Expect = 6e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 515 tgttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaag 568 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122427 tgttatgctgcatttcatgacgaagaatggggagttccagttcatgatgacaag 122480 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1305 gcatgtaatgatgtatattcttt 1327 ||||||||||||||||||||||| Sbjct: 123726 gcatgtaatgatgtatattcttt 123748
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 258 bits (130), Expect = 5e-65 Identities = 229/262 (87%) Strand = Plus / Plus Query: 798 tagaggagtttgggtcatttgataagtactgctggagctttgtgaaccacagacctatat 857 ||||||||||||| | ||||||||||| || ||||||||||||||| ||| |||||| | Sbjct: 115755 tagaggagtttggaacgtttgataagtattgttggagctttgtgaacaacaaacctattt 115814 Query: 858 tgagcacattcaggtatccccgtcaggttcctgtcaagacatctaaagcggacgcaataa 917 |||||| ||||||||||||||| |||||||||||||| |||||||||||||| || |||| Sbjct: 115815 tgagcagattcaggtatccccgccaggttcctgtcaaaacatctaaagcggatgcgataa 115874 Query: 918 gcaaagatttggtccgaaggggtttccgtagcgtaggcccaacggtcgtgtacaccttca 977 ||||||||||||| || ||||| |||||||||||||||||||| || || ||||| || | Sbjct: 115875 gcaaagatttggttcgcagggggttccgtagcgtaggcccaacagttgtctacacgttta 115934 Query: 978 tgcaagtctccggcatgacgaacgaccaccttgtctcctgctaccggtttgctgaatgcg 1037 ||||||| || |||||||| || |||||| | ||||||||||||||||||||||||||| Sbjct: 115935 tgcaagtttcaggcatgaccaatgaccacttgatctcctgctaccggtttgctgaatgcg 115994 Query: 1038 ccgcagccgcaaccggtgctaa 1059 | || || ||||| ||| |||| Sbjct: 115995 ctgctgcagcaactggttctaa 116016 Score = 180 bits (91), Expect = 9e-42 Identities = 256/311 (82%) Strand = Plus / Plus Query: 197 aagaagcctgctgcggtgcctacattgctcccttcgctcagcgtgccggcaggaatgcgc 256 |||||||| || |||||||| |||||||| || |||||||| ||||||||||| |||||| Sbjct: 113694 aagaagcccgccgcggtgcccacattgctgccctcgctcagtgtgccggcagggatgcgc 113753 Query: 257 cggcaggagctgctactgcgctcagggttctctcttgatgcctcatgctcatcagacgct 316 ||||||||||||| |||||||| ||| | || || || || || ||||| || ||||| Sbjct: 113754 aggcaggagctgctgctgcgctcggggctgtcgctcgacgcgtcgtgctcgtcggacgca 113813 Query: 317 tcgacagactccttctgcagccgggcatccactgggcggattggaaggccggtgtttggg 376 || || ||||| |||||||||||||| ||||| ||||||||||| |||||| ||||||| Sbjct: 113814 tccacggactcgttctgcagccgggcgtccacggggcggattgggaggccgacgtttggg 113873 Query: 377 ccgaggaagaagaagaccgtctcccaggctgatcataaagtctctgccatgctggaaagg 436 | |||||||||||||| ||| ||| ||||||| || | | |||||||||||||| Sbjct: 113874 gctaggaagaagaagactctctgtcagactgatcacaagattgtttccatgctggaaagg 113933 Query: 437 gaggcaggatctgcttctccaagtgatgcttctggtctgaagaggaggtgtgcttgggtg 496 |||| |||| |||||| | | ||||| |||||||||||||||||||| | |||||| Sbjct: 113934 gaggttggattggcttctgctaatgatgtgcctggtctgaagaggaggtgttcatgggtg 113993 Query: 497 actgctaatac 507 || |||||||| Sbjct: 113994 acagctaatac 114004 Score = 151 bits (76), Expect = 8e-33 Identities = 130/148 (87%) Strand = Plus / Plus Query: 649 cagggaggttttcatggattttgacccttcattggtctctgagttaagtgagaggaagat 708 |||||||||||||||||||||||||||| |||||||||| | ||||||| | |||||| Sbjct: 115291 cagggaggttttcatggattttgaccctgtattggtctctaaactaagtgaaaagaagat 115350 Query: 709 tattgcacctggaagtccgagcagctccttgttatctgaacagaaattgcgcggtgttat 768 |||||||||||||||||| ||||| |||||||||||||||| ||| |||| ||||| || Sbjct: 115351 tattgcacctggaagtcctagcagtaccttgttatctgaacaaaaactgcgtggtgtcat 115410 Query: 769 tgagaatgcccgacaaatactgaaggtt 796 ||| ||||| || |||||||| |||||| Sbjct: 115411 tgaaaatgcacgccaaatactcaaggtt 115438 Score = 127 bits (64), Expect = 1e-25 Identities = 126/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 25 cgcaatgtccgggtctagctcgaggggtcggctctcgcccgcgtccggtggcgg---aga 81 ||||||||||||| ||| | ||||||| ||||||||||| || ||||| ||||| ||| Sbjct: 113525 cgcaatgtccggggctaacgcgagggggcggctctcgccggcttccggcggcggtggaga 113584 Query: 82 ctctgagccgcggtctgcggggagcaggacacgatctgtgtctgctacccggggccggaa 141 |||||||||||||||||||||||||||||| || || || || ||||| |||| ||||| Sbjct: 113585 ctctgagccgcggtctgcggggagcaggacgcggtcggtttccgctacaaggggacggaa 113644 Query: 142 ggcgtcaccgaggcctgggagggatg 167 | |||| ||||||||||||||||||| Sbjct: 113645 gccgtcgccgaggcctgggagggatg 113670 Score = 99.6 bits (50), Expect = 3e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 571 gttgtttgagttactggtgctctcgggttcactggctgaacttacttggccaacaatttt 630 |||||||||||| ||||||||||| ||| || ||||||||||||| |||||||||||| | Sbjct: 115127 gttgtttgagttgctggtgctctcaggtgcattggctgaacttacatggccaacaattct 115186 Query: 631 gaacaggagatctatattcagg 652 ||||| |||| ||||||||||| Sbjct: 115187 gaacaagagacctatattcagg 115208 Score = 91.7 bits (46), Expect = 6e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 515 tgttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaag 568 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 114990 tgttatgctgcatttcatgacgaagaatggggagttccagttcatgatgacaag 115043 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1305 gcatgtaatgatgtatattcttt 1327 ||||||||||||||||||||||| Sbjct: 116287 gcatgtaatgatgtatattcttt 116309
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 258 bits (130), Expect = 5e-65 Identities = 229/262 (87%) Strand = Plus / Plus Query: 798 tagaggagtttgggtcatttgataagtactgctggagctttgtgaaccacagacctatat 857 ||||||||||||| | ||||||||||| || ||||||||||||||| ||| |||||| | Sbjct: 24995170 tagaggagtttggaacgtttgataagtattgttggagctttgtgaacaacaaacctattt 24995229 Query: 858 tgagcacattcaggtatccccgtcaggttcctgtcaagacatctaaagcggacgcaataa 917 |||||| ||||||||||||||| |||||||||||||| |||||||||||||| || |||| Sbjct: 24995230 tgagcagattcaggtatccccgccaggttcctgtcaaaacatctaaagcggatgcgataa 24995289 Query: 918 gcaaagatttggtccgaaggggtttccgtagcgtaggcccaacggtcgtgtacaccttca 977 ||||||||||||| || ||||| |||||||||||||||||||| || || ||||| || | Sbjct: 24995290 gcaaagatttggttcgcagggggttccgtagcgtaggcccaacagttgtctacacgttta 24995349 Query: 978 tgcaagtctccggcatgacgaacgaccaccttgtctcctgctaccggtttgctgaatgcg 1037 ||||||| || |||||||| || |||||| | ||||||||||||||||||||||||||| Sbjct: 24995350 tgcaagtttcaggcatgaccaatgaccacttgatctcctgctaccggtttgctgaatgcg 24995409 Query: 1038 ccgcagccgcaaccggtgctaa 1059 | || || ||||| ||| |||| Sbjct: 24995410 ctgctgcagcaactggttctaa 24995431 Score = 180 bits (91), Expect = 9e-42 Identities = 256/311 (82%) Strand = Plus / Plus Query: 197 aagaagcctgctgcggtgcctacattgctcccttcgctcagcgtgccggcaggaatgcgc 256 |||||||| || |||||||| |||||||| || |||||||| ||||||||||| |||||| Sbjct: 24993109 aagaagcccgccgcggtgcccacattgctgccctcgctcagtgtgccggcagggatgcgc 24993168 Query: 257 cggcaggagctgctactgcgctcagggttctctcttgatgcctcatgctcatcagacgct 316 ||||||||||||| |||||||| ||| | || || || || || ||||| || ||||| Sbjct: 24993169 aggcaggagctgctgctgcgctcggggctgtcgctcgacgcgtcgtgctcgtcggacgca 24993228 Query: 317 tcgacagactccttctgcagccgggcatccactgggcggattggaaggccggtgtttggg 376 || || ||||| |||||||||||||| ||||| ||||||||||| |||||| ||||||| Sbjct: 24993229 tccacggactcgttctgcagccgggcgtccacggggcggattgggaggccgacgtttggg 24993288 Query: 377 ccgaggaagaagaagaccgtctcccaggctgatcataaagtctctgccatgctggaaagg 436 | |||||||||||||| ||| ||| ||||||| || | | |||||||||||||| Sbjct: 24993289 gctaggaagaagaagactctctgtcagactgatcacaagattgtttccatgctggaaagg 24993348 Query: 437 gaggcaggatctgcttctccaagtgatgcttctggtctgaagaggaggtgtgcttgggtg 496 |||| |||| |||||| | | ||||| |||||||||||||||||||| | |||||| Sbjct: 24993349 gaggttggattggcttctgctaatgatgtgcctggtctgaagaggaggtgttcatgggtg 24993408 Query: 497 actgctaatac 507 || |||||||| Sbjct: 24993409 acagctaatac 24993419 Score = 151 bits (76), Expect = 8e-33 Identities = 130/148 (87%) Strand = Plus / Plus Query: 649 cagggaggttttcatggattttgacccttcattggtctctgagttaagtgagaggaagat 708 |||||||||||||||||||||||||||| |||||||||| | ||||||| | |||||| Sbjct: 24994706 cagggaggttttcatggattttgaccctgtattggtctctaaactaagtgaaaagaagat 24994765 Query: 709 tattgcacctggaagtccgagcagctccttgttatctgaacagaaattgcgcggtgttat 768 |||||||||||||||||| ||||| |||||||||||||||| ||| |||| ||||| || Sbjct: 24994766 tattgcacctggaagtcctagcagtaccttgttatctgaacaaaaactgcgtggtgtcat 24994825 Query: 769 tgagaatgcccgacaaatactgaaggtt 796 ||| ||||| || |||||||| |||||| Sbjct: 24994826 tgaaaatgcacgccaaatactcaaggtt 24994853 Score = 127 bits (64), Expect = 1e-25 Identities = 126/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 25 cgcaatgtccgggtctagctcgaggggtcggctctcgcccgcgtccggtggcgg---aga 81 ||||||||||||| ||| | ||||||| ||||||||||| || ||||| ||||| ||| Sbjct: 24992940 cgcaatgtccggggctaacgcgagggggcggctctcgccggcttccggcggcggtggaga 24992999 Query: 82 ctctgagccgcggtctgcggggagcaggacacgatctgtgtctgctacccggggccggaa 141 |||||||||||||||||||||||||||||| || || || || ||||| |||| ||||| Sbjct: 24993000 ctctgagccgcggtctgcggggagcaggacgcggtcggtttccgctacaaggggacggaa 24993059 Query: 142 ggcgtcaccgaggcctgggagggatg 167 | |||| ||||||||||||||||||| Sbjct: 24993060 gccgtcgccgaggcctgggagggatg 24993085 Score = 99.6 bits (50), Expect = 3e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 571 gttgtttgagttactggtgctctcgggttcactggctgaacttacttggccaacaatttt 630 |||||||||||| ||||||||||| ||| || ||||||||||||| |||||||||||| | Sbjct: 24994542 gttgtttgagttgctggtgctctcaggtgcattggctgaacttacatggccaacaattct 24994601 Query: 631 gaacaggagatctatattcagg 652 ||||| |||| ||||||||||| Sbjct: 24994602 gaacaagagacctatattcagg 24994623 Score = 91.7 bits (46), Expect = 6e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 515 tgttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaag 568 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 24994405 tgttatgctgcatttcatgacgaagaatggggagttccagttcatgatgacaag 24994458 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1305 gcatgtaatgatgtatattcttt 1327 ||||||||||||||||||||||| Sbjct: 24995702 gcatgtaatgatgtatattcttt 24995724
>dbj|AK229092.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-37-L15 Length = 1533 Score = 83.8 bits (42), Expect = 2e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 518 tatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaagaagttgttt 577 |||||||| || ||||||||||||||||||||||| || ||||||||||||||| | ||| Sbjct: 845 tatgttgctttccatgacgaagaatggggagttcctgtacatgacgacaagaagcttttt 904 Query: 578 gagtta 583 |||||| Sbjct: 905 gagtta 910
>ref|NM_101465.3| Arabidopsis thaliana DNA-3-methyladenine glycosylase I (AT1G15970) mRNA, complete cds Length = 1638 Score = 83.8 bits (42), Expect = 2e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 518 tatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaagaagttgttt 577 |||||||| || ||||||||||||||||||||||| || ||||||||||||||| | ||| Sbjct: 846 tatgttgctttccatgacgaagaatggggagttcctgtacatgacgacaagaagcttttt 905 Query: 578 gagtta 583 |||||| Sbjct: 906 gagtta 911
>emb|BX817108.1|CNS0AD24 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH85ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1622 Score = 83.8 bits (42), Expect = 2e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 518 tatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaagaagttgttt 577 |||||||| || ||||||||||||||||||||||| || ||||||||||||||| | ||| Sbjct: 830 tatgttgctttccatgacgaagaatggggagttcctgtacatgacgacaagaagcttttt 889 Query: 578 gagtta 583 |||||| Sbjct: 890 gagtta 895
>emb|BX816941.1|CNS0AD44 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZH03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1606 Score = 83.8 bits (42), Expect = 2e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 518 tatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaagaagttgttt 577 |||||||| || ||||||||||||||||||||||| || ||||||||||||||| | ||| Sbjct: 828 tatgttgctttccatgacgaagaatggggagttcctgtacatgacgacaagaagcttttt 887 Query: 578 gagtta 583 |||||| Sbjct: 888 gagtta 893
>ref|NM_001055816.1| Oryza sativa (japonica cultivar-group) Os03g0198900 (Os03g0198900) mRNA, complete cds Length = 1854 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 517 ttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaagaagttgtt 576 ||||||||| || ||||| |||||||||||||||||||||||||| ||| ||||| |||| Sbjct: 925 ttatgttgctttccatgatgaagaatggggagttccagttcatgatgaccagaagctgtt 984 Query: 577 tgag 580 |||| Sbjct: 985 tgag 988
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 517 ttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaagaagttgtt 576 ||||||||| || ||||| |||||||||||||||||||||||||| ||| ||||| |||| Sbjct: 86685 ttatgttgctttccatgatgaagaatggggagttccagttcatgatgaccagaagctgtt 86744 Query: 577 tgag 580 |||| Sbjct: 86745 tgag 86748
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 517 ttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaagaagttgtt 576 ||||||||| || ||||| |||||||||||||||||||||||||| ||| ||||| |||| Sbjct: 5169048 ttatgttgctttccatgatgaagaatggggagttccagttcatgatgaccagaagctgtt 5168989 Query: 577 tgag 580 |||| Sbjct: 5168988 tgag 5168985
>dbj|AK063273.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-C01, full insert sequence Length = 1854 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 517 ttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaagaagttgtt 576 ||||||||| || ||||| |||||||||||||||||||||||||| ||| ||||| |||| Sbjct: 925 ttatgttgctttccatgatgaagaatggggagttccagttcatgatgaccagaagctgtt 984 Query: 577 tgag 580 |||| Sbjct: 985 tgag 988
>emb|BX816683.1|CNS0AD7Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 75.8 bits (38), Expect = 4e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaagaagttgtttgagtta 583 ||||||||||||||||||||||| || ||||||||||||||| | ||||||||| Sbjct: 842 catgacgaagaatggggagttcctgtacatgacgacaagaagctttttgagtta 895
>dbj|AK227727.1| Arabidopsis thaliana mRNA for hypothetical protein, clone: RAFL14-30-N18 Length = 1250 Score = 69.9 bits (35), Expect = 2e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaagaagttgtt 576 ||||| |||||||||||||||||||||||||| ||||||| |||||| Sbjct: 491 catgatgaagaatggggagttccagttcatgatgacaagacgttgtt 537
>ref|NM_112107.2| Arabidopsis thaliana DNA-3-methyladenine glycosylase I (AT3G12710) mRNA, complete cds Length = 1341 Score = 69.9 bits (35), Expect = 2e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaagaagttgtt 576 ||||| |||||||||||||||||||||||||| ||||||| |||||| Sbjct: 569 catgatgaagaatggggagttccagttcatgatgacaagacgttgtt 615
>gb|AY084745.1| Arabidopsis thaliana clone 116541 mRNA, complete sequence Length = 1342 Score = 69.9 bits (35), Expect = 2e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaagaagttgtt 576 ||||| |||||||||||||||||||||||||| ||||||| |||||| Sbjct: 570 catgatgaagaatggggagttccagttcatgatgacaagacgttgtt 616
>emb|BX822095.1|CNS0A7AT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1215 Score = 69.9 bits (35), Expect = 2e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaagaagttgtt 576 ||||| |||||||||||||||||||||||||| ||||||| |||||| Sbjct: 515 catgatgaagaatggggagttccagttcatgatgacaagacgttgtt 561
>emb|BX825507.1|CNS0A6GN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZA12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1098 Score = 69.9 bits (35), Expect = 2e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaagaagttgtt 576 ||||| |||||||||||||||||||||||||| ||||||| |||||| Sbjct: 475 catgatgaagaatggggagttccagttcatgatgacaagacgttgtt 521
>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete sequence Length = 80442 Score = 69.9 bits (35), Expect = 2e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 518 tatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaag 568 |||||||| || ||||||||||||||||||||||| || |||||||||||| Sbjct: 22686 tatgttgctttccatgacgaagaatggggagttcctgtacatgacgacaag 22636
>dbj|AK227342.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-02-L17 Length = 1512 Score = 63.9 bits (32), Expect = 1e-06 Identities = 86/104 (82%) Strand = Plus / Plus Query: 476 aagaggaggtgtgcttgggtgactgctaataccgatccatgttatgttgcatttcatgac 535 |||| ||||||| |||||||||| | || |||||||||||||| | | || ||||| Sbjct: 828 aagaagaggtgtacttgggtgacaccaaactccgatccatgttatatagttttccatgat 887 Query: 536 gaagaatggggagttccagttcatgacgacaagaagttgtttga 579 ||||||||||| || |||||||| || ||||||| ||||||||| Sbjct: 888 gaagaatggggtgtgccagttcacgatgacaagaggttgtttga 931
>ref|NM_001037014.1| Arabidopsis thaliana DNA-3-methyladenine glycosylase I (AT5G57970) mRNA, complete cds Length = 1520 Score = 63.9 bits (32), Expect = 1e-06 Identities = 86/104 (82%) Strand = Plus / Plus Query: 476 aagaggaggtgtgcttgggtgactgctaataccgatccatgttatgttgcatttcatgac 535 |||| ||||||| |||||||||| | || |||||||||||||| | | || ||||| Sbjct: 828 aagaagaggtgtacttgggtgacaccaaactccgatccatgttatatagttttccatgat 887 Query: 536 gaagaatggggagttccagttcatgacgacaagaagttgtttga 579 ||||||||||| || |||||||| || ||||||| ||||||||| Sbjct: 888 gaagaatggggtgtgccagttcacgatgacaagaggttgtttga 931
>ref|NM_125182.2| Arabidopsis thaliana DNA-3-methyladenine glycosylase I (AT5G57970) mRNA, complete cds Length = 1502 Score = 63.9 bits (32), Expect = 1e-06 Identities = 86/104 (82%) Strand = Plus / Plus Query: 476 aagaggaggtgtgcttgggtgactgctaataccgatccatgttatgttgcatttcatgac 535 |||| ||||||| |||||||||| | || |||||||||||||| | | || ||||| Sbjct: 828 aagaagaggtgtacttgggtgacaccaaactccgatccatgttatatagttttccatgat 887 Query: 536 gaagaatggggagttccagttcatgacgacaagaagttgtttga 579 ||||||||||| || |||||||| || ||||||| ||||||||| Sbjct: 888 gaagaatggggtgtgccagttcacgatgacaagaggttgtttga 931
>gb|AC136973.16| Medicago truncatula clone mth2-24n22, complete sequence Length = 109432 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 529 tcatgacgaagaatggggagttccagttcatgacgacaag 568 |||||| |||||||||||||||||||||||||| |||||| Sbjct: 95644 tcatgatgaagaatggggagttccagttcatgatgacaag 95683
>gb|BT003075.1| Arabidopsis thaliana At5g57970 gene, complete cds Length = 1044 Score = 63.9 bits (32), Expect = 1e-06 Identities = 86/104 (82%) Strand = Plus / Plus Query: 476 aagaggaggtgtgcttgggtgactgctaataccgatccatgttatgttgcatttcatgac 535 |||| ||||||| |||||||||| | || |||||||||||||| | | || ||||| Sbjct: 457 aagaagaggtgtacttgggtgacaccaaactccgatccatgttatatagttttccatgat 516 Query: 536 gaagaatggggagttccagttcatgacgacaagaagttgtttga 579 ||||||||||| || |||||||| || ||||||| ||||||||| Sbjct: 517 gaagaatggggtgtgccagttcacgatgacaagaggttgtttga 560
>emb|BX830119.1|CNS0A079 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1466 Score = 63.9 bits (32), Expect = 1e-06 Identities = 86/104 (82%) Strand = Plus / Plus Query: 476 aagaggaggtgtgcttgggtgactgctaataccgatccatgttatgttgcatttcatgac 535 |||| ||||||| |||||||||| | || |||||||||||||| | | || ||||| Sbjct: 811 aagaagaggtgtacttgggtgacaccaaactccgatccatgttatatagttttccatgat 870 Query: 536 gaagaatggggagttccagttcatgacgacaagaagttgtttga 579 ||||||||||| || |||||||| || ||||||| ||||||||| Sbjct: 871 gaagaatggggtgtgccagttcacgatgacaagaggttgtttga 914
>emb|BX829989.1|CNS0A046 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB51ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1443 Score = 63.9 bits (32), Expect = 1e-06 Identities = 86/104 (82%) Strand = Plus / Plus Query: 476 aagaggaggtgtgcttgggtgactgctaataccgatccatgttatgttgcatttcatgac 535 |||| ||||||| |||||||||| | || |||||||||||||| | | || ||||| Sbjct: 812 aagaagaggtgtacttgggtgacaccaaactccgatccatgttatatagttttccatgat 871 Query: 536 gaagaatggggagttccagttcatgacgacaagaagttgtttga 579 ||||||||||| || |||||||| || ||||||| ||||||||| Sbjct: 872 gaagaatggggtgtgccagttcacgatgacaagaggttgtttga 915
>emb|BX831934.1|CNS09YN8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH40ZA05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1439 Score = 63.9 bits (32), Expect = 1e-06 Identities = 86/104 (82%) Strand = Plus / Plus Query: 476 aagaggaggtgtgcttgggtgactgctaataccgatccatgttatgttgcatttcatgac 535 |||| ||||||| |||||||||| | || |||||||||||||| | | || ||||| Sbjct: 801 aagaagaggtgtacttgggtgacaccaaactccgatccatgttatatagttttccatgat 860 Query: 536 gaagaatggggagttccagttcatgacgacaagaagttgtttga 579 ||||||||||| || |||||||| || ||||||| ||||||||| Sbjct: 861 gaagaatggggtgtgccagttcacgatgacaagaggttgtttga 904
>gb|AC146774.7| Medicago truncatula clone mth2-91k24, complete sequence Length = 122643 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 529 tcatgacgaagaatggggagttccagttcatgacgacaag 568 |||||| |||||||||||||||||||||||||| |||||| Sbjct: 42208 tcatgatgaagaatggggagttccagttcatgatgacaag 42247
>dbj|AB024033.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MBK21 Length = 79125 Score = 61.9 bits (31), Expect = 6e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 530 catgacgaagaatggggagttccagttcatgacgacaag 568 ||||| |||||||||||||||||||||||||| |||||| Sbjct: 26103 catgatgaagaatggggagttccagttcatgatgacaag 26065
>dbj|AB016874.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K23L20 Length = 81729 Score = 61.9 bits (31), Expect = 6e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 530 catgacgaagaatggggagttccagttcatgacgacaag 568 |||||| ||||||||||||||||||||||||| |||||| Sbjct: 3489 catgacaaagaatggggagttccagttcatgatgacaag 3451
>gb|AC152068.17| Medicago truncatula clone mth2-29p8, complete sequence Length = 118589 Score = 61.9 bits (31), Expect = 6e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaag 568 ||||| |||||||||||||||||||| |||||||||||| Sbjct: 80079 catgatgaagaatggggagttccagtacatgacgacaag 80117 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 803 gagtttgggtcatttgataagtactgctggagctttgtgaaccacagacctatattgagc 862 ||||||||||||||||| || ||| ||||| ||||||||||||| |||||| | ||| Sbjct: 81781 gagtttgggtcatttgacaattacatttggagttttgtgaaccacaagcctatacttagc 81840 Query: 863 acattcaggtatccccgtcaggttcc 888 | |||| | |||||||| |||||||| Sbjct: 81841 aaattccgatatccccgacaggttcc 81866
>gb|AC136953.17| Medicago truncatula clone mth2-20h6, complete sequence Length = 94019 Score = 61.9 bits (31), Expect = 6e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 530 catgacgaagaatggggagttccagttcatgacgacaag 568 ||||| |||||||||||||||||||| |||||||||||| Sbjct: 73905 catgatgaagaatggggagttccagtacatgacgacaag 73867 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 803 gagtttgggtcatttgataagtactgctggagctttgtgaaccacagacctatattgagc 862 ||||||||||||||||| || ||| ||||| ||||||||||||| |||||| | ||| Sbjct: 72203 gagtttgggtcatttgacaattacatttggagttttgtgaaccacaagcctatacttagc 72144 Query: 863 acattcaggtatccccgtcaggttcc 888 | |||| | |||||||| |||||||| Sbjct: 72143 aaattccgatatccccgacaggttcc 72118
>ref|NM_001069731.1| Oryza sativa (japonica cultivar-group) Os09g0420300 (Os09g0420300) mRNA, complete cds Length = 1648 Score = 60.0 bits (30), Expect = 2e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 491 tgggtgactgctaataccgatccatgttatgttgcatttcatgacgaagaatggggagtt 550 ||||| ||| |||| || |||||||| |||| ||| || |||||| | ||||||||||| Sbjct: 615 tgggtcactcctaacactgatccatgctatgctgccttccatgaccatgaatggggagtc 674 Query: 551 ccagttcatgacgacaagaagttgtttgag 580 || || ||||| |||||||| ||||||||| Sbjct: 675 ccggtgcatgatgacaagaaattgtttgag 704 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 791 aaggttatagaggagtttgggtcatttgataagtactgctggagctt 837 ||||| |||||||||||||| |||||||| || ||||||||| |||| Sbjct: 915 aaggtcatagaggagtttggatcatttgacaactactgctggggctt 961
>ref|NM_123835.2| Arabidopsis thaliana DNA-3-methyladenine glycosylase I (AT5G44680) mRNA, complete cds Length = 1360 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaa 567 |||||| ||||||||||||||||||||||||| ||||| Sbjct: 593 catgacaaagaatggggagttccagttcatgatgacaa 630
>gb|AY086922.1| Arabidopsis thaliana clone 29551 mRNA, complete sequence Length = 1190 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaa 567 |||||| ||||||||||||||||||||||||| ||||| Sbjct: 593 catgacaaagaatggggagttccagttcatgatgacaa 630
>gb|BT004932.1| Arabidopsis thaliana clone U20643 unknown protein (At5g44680) mRNA, complete cds Length = 1093 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaa 567 |||||| ||||||||||||||||||||||||| ||||| Sbjct: 541 catgacaaagaatggggagttccagttcatgatgacaa 578
>gb|BT003900.1| Arabidopsis thaliana clone RAFL15-15-G20 (R20643) unknown protein (At5g44680) mRNA, complete cds Length = 1376 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaa 567 |||||| ||||||||||||||||||||||||| ||||| Sbjct: 593 catgacaaagaatggggagttccagttcatgatgacaa 630
>dbj|AK120582.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136E12, full insert sequence Length = 1648 Score = 60.0 bits (30), Expect = 2e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 491 tgggtgactgctaataccgatccatgttatgttgcatttcatgacgaagaatggggagtt 550 ||||| ||| |||| || |||||||| |||| ||| || |||||| | ||||||||||| Sbjct: 616 tgggtcactcctaacactgatccatgctatgctgccttccatgaccatgaatggggagtc 675 Query: 551 ccagttcatgacgacaagaagttgtttgag 580 || || ||||| |||||||| ||||||||| Sbjct: 676 ccggtgcatgatgacaagaaattgtttgag 705 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 791 aaggttatagaggagtttgggtcatttgataagtactgctggagctt 837 ||||| |||||||||||||| |||||||| || ||||||||| |||| Sbjct: 916 aaggtcatagaggagtttggatcatttgacaactactgctggggctt 962
>emb|BX831090.1|CNS0A0PL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1274 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaa 567 |||||| ||||||||||||||||||||||||| ||||| Sbjct: 568 catgacaaagaatggggagttccagttcatgatgacaa 605
>emb|BX831035.1|CNS0A0OK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1396 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaa 567 |||||| ||||||||||||||||||||||||| ||||| Sbjct: 642 catgacaaagaatggggagttccagttcatgatgacaa 679
>emb|BX830544.1|CNS0A1H1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB8ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1116 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 530 catgacgaagaatggggagttccagttcatgacgacaa 567 |||||| ||||||||||||||||||||||||| ||||| Sbjct: 581 catgacaaagaatggggagttccagttcatgatgacaa 618
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Minus Query: 792 aggttatagaggagtttgggtcatttgataagtactgctggagctt 837 |||| |||||||||||||| |||||||| || ||||||||| |||| Sbjct: 15081324 aggtcatagaggagtttggatcatttgacaactactgctggggctt 15081279 Score = 42.1 bits (21), Expect = 5.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 649 cagggaggttttcatggattttgacccttcattggtctctgagttaagtgagaggaa 705 |||||||||||||||||| ||||| ||| |||||| | || ||||||||||||| Sbjct: 15081700 cagggaggttttcatggactttgatcctctattggtagcaaagctaagtgagaggaa 15081644
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04 Length = 148848 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Minus Query: 792 aggttatagaggagtttgggtcatttgataagtactgctggagctt 837 |||| |||||||||||||| |||||||| || ||||||||| |||| Sbjct: 72967 aggtcatagaggagtttggatcatttgacaactactgctggggctt 72922 Score = 42.1 bits (21), Expect = 5.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 649 cagggaggttttcatggattttgacccttcattggtctctgagttaagtgagaggaa 705 |||||||||||||||||| ||||| ||| |||||| | || ||||||||||||| Sbjct: 73343 cagggaggttttcatggactttgatcctctattggtagcaaagctaagtgagaggaa 73287
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Minus Query: 792 aggttatagaggagtttgggtcatttgataagtactgctggagctt 837 |||| |||||||||||||| |||||||| || ||||||||| |||| Sbjct: 150770 aggtcatagaggagtttggatcatttgacaactactgctggggctt 150725 Score = 42.1 bits (21), Expect = 5.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 649 cagggaggttttcatggattttgacccttcattggtctctgagttaagtgagaggaa 705 |||||||||||||||||| ||||| ||| |||||| | || ||||||||||||| Sbjct: 151146 cagggaggttttcatggactttgatcctctattggtagcaaagctaagtgagaggaa 151090
>ref|NM_106733.1| Arabidopsis thaliana DNA-3-methyladenine glycosylase I (AT1G80850) mRNA, complete cds Length = 984 Score = 50.1 bits (25), Expect = 0.021 Identities = 52/61 (85%) Strand = Plus / Plus Query: 509 gatccatgttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaag 568 |||| |||||| |||| || ||||| ||||||||||||||||| || ||||| |||||| Sbjct: 430 gatcaatgttacattgccttccatgatgaagaatggggagttcctgtccatgatgacaag 489 Query: 569 a 569 | Sbjct: 490 a 490 Score = 48.1 bits (24), Expect = 0.083 Identities = 27/28 (96%) Strand = Plus / Plus Query: 645 tattcagggaggttttcatggattttga 672 |||||||||||||||||||||| ||||| Sbjct: 566 tattcagggaggttttcatggactttga 593
>emb|BX814179.1|CNS0ADUB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1391 Score = 50.1 bits (25), Expect = 0.021 Identities = 52/61 (85%) Strand = Plus / Plus Query: 509 gatccatgttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaag 568 |||| |||||| |||| || ||||| ||||||||||||||||| || ||||| |||||| Sbjct: 679 gatcaatgttacattgccttccatgatgaagaatggggagttcctgtccatgatgacaag 738 Query: 569 a 569 | Sbjct: 739 a 739 Score = 48.1 bits (24), Expect = 0.083 Identities = 27/28 (96%) Strand = Plus / Plus Query: 645 tattcagggaggttttcatggattttga 672 |||||||||||||||||||||| ||||| Sbjct: 815 tattcagggaggttttcatggactttga 842
>emb|BX816123.1|CNS0ADDE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1378 Score = 50.1 bits (25), Expect = 0.021 Identities = 52/61 (85%) Strand = Plus / Plus Query: 509 gatccatgttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaag 568 |||| |||||| |||| || ||||| ||||||||||||||||| || ||||| |||||| Sbjct: 676 gatcaatgttacattgccttccatgatgaagaatggggagttcctgtccatgatgacaag 735 Query: 569 a 569 | Sbjct: 736 a 736 Score = 48.1 bits (24), Expect = 0.083 Identities = 27/28 (96%) Strand = Plus / Plus Query: 645 tattcagggaggttttcatggattttga 672 |||||||||||||||||||||| ||||| Sbjct: 812 tattcagggaggttttcatggactttga 839
>emb|BX830032.1|CNS0A052 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1393 Score = 50.1 bits (25), Expect = 0.021 Identities = 61/73 (83%) Strand = Plus / Plus Query: 507 ccgatccatgttatgttgcatttcatgacgaagaatggggagttccagttcatgacgaca 566 |||||||||||||| | | || ||||| ||||||||||| || |||||||| || ||| Sbjct: 815 ccgatccatgttatatagttttccatgatgaagaatggggtgtgccagttcacgataaca 874 Query: 567 agaagttgtttga 579 ||| ||||||||| Sbjct: 875 agaggttgtttga 887
>ref|NM_001064754.1| Oryza sativa (japonica cultivar-group) Os06g0649800 (Os06g0649800) mRNA, complete cds Length = 1419 Score = 48.1 bits (24), Expect = 0.083 Identities = 39/44 (88%) Strand = Plus / Plus Query: 917 agcaaagatttggtccgaaggggtttccgtagcgtaggcccaac 960 |||||||| ||||||||||||||||||| |||| |||||||| Sbjct: 1015 agcaaagacatggtccgaaggggtttccgaggcgtgggcccaac 1058
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.083 Identities = 39/44 (88%) Strand = Plus / Minus Query: 917 agcaaagatttggtccgaaggggtttccgtagcgtaggcccaac 960 |||||||| ||||||||||||||||||| |||| |||||||| Sbjct: 26186256 agcaaagacatggtccgaaggggtttccgaggcgtgggcccaac 26186213
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 48.1 bits (24), Expect = 0.083 Identities = 30/32 (93%) Strand = Plus / Minus Query: 530 catgacgaagaatggggagttccagttcatga 561 |||||||||||||||||| |||| |||||||| Sbjct: 1595257 catgacgaagaatggggaattccggttcatga 1595226
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 48.1 bits (24), Expect = 0.083 Identities = 39/44 (88%) Strand = Plus / Minus Query: 917 agcaaagatttggtccgaaggggtttccgtagcgtaggcccaac 960 |||||||| ||||||||||||||||||| |||| |||||||| Sbjct: 50796 agcaaagacatggtccgaaggggtttccgaggcgtgggcccaac 50753
>gb|AC011713.2|F23A5 Arabidopsis thaliana chromosome 1 BAC F23A5 sequence, complete sequence Length = 109694 Score = 48.1 bits (24), Expect = 0.083 Identities = 51/60 (85%) Strand = Plus / Minus Query: 509 gatccatgttatgttgcatttcatgacgaagaatggggagttccagttcatgacgacaag 568 |||| |||||| |||| || ||||| ||||||||||||||||| || ||||| |||||| Sbjct: 70424 gatcaatgttacattgccttccatgatgaagaatggggagttcctgtccatgatgacaag 70365
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 69 ccggtggcggagactctgagccg 91 ||||||||||||||||||||||| Sbjct: 1138767 ccggtggcggagactctgagccg 1138789
>emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 5 Length = 209164 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 atgttatgttgcatttcatgac 535 |||||||||||||||||||||| Sbjct: 151235 atgttatgttgcatttcatgac 151256
>emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 43 Length = 198226 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 atgttatgttgcatttcatgac 535 |||||||||||||||||||||| Sbjct: 120225 atgttatgttgcatttcatgac 120246
>emb|AL662908.7| Mouse DNA sequence from clone RP23-478O10 on chromosome 11 Contains two NACHT, leucine rich repeat and PYD containing 1 (NALP1) pseudogenes, complete sequence Length = 96115 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 626 attttgaacaggagatctatat 647 |||||||||||||||||||||| Sbjct: 89260 attttgaacaggagatctatat 89239
>gb|CP000437.1| Francisella tularensis subsp. holarctica OSU18, complete genome Length = 1895727 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tcgcatcagcaacagcgacag 188 ||||||||||||||||||||| Sbjct: 987548 tcgcatcagcaacagcgacag 987528
>gb|CP000452.1| Nitrosomonas eutropha C71 Plasmid2, complete sequence Length = 55635 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 tcgacagactccttctgcagc 337 ||||||||||||||||||||| Sbjct: 17312 tcgacagactccttctgcagc 17332
>gb|CP000451.1| Nitrosomonas eutropha C71 Plasmid1, complete sequence Length = 65132 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 tcgacagactccttctgcagc 337 ||||||||||||||||||||| Sbjct: 17498 tcgacagactccttctgcagc 17478
>gb|AC130659.11| Mus musculus chromosome 1, clone RP23-326C19, complete sequence Length = 172121 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1311 aatgatgtatattctttgtga 1331 ||||||||||||||||||||| Sbjct: 76323 aatgatgtatattctttgtga 76343
>gb|AC127349.3| Mus musculus BAC clone RP23-62M5 from chromosome 13, complete sequence Length = 193255 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 ggaaagggaggcaggatctgc 450 ||||||||||||||||||||| Sbjct: 113774 ggaaagggaggcaggatctgc 113754
>gb|AC121839.3| Mus musculus BAC clone RP24-76E2 from chromosome 13, complete sequence Length = 182835 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 661 catggattttgacccttcatt 681 ||||||||||||||||||||| Sbjct: 122292 catggattttgacccttcatt 122272
>gb|AC162295.3| Mus musculus chromosome 1, clone RP24-232K22, complete sequence Length = 180957 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1311 aatgatgtatattctttgtga 1331 ||||||||||||||||||||| Sbjct: 17732 aatgatgtatattctttgtga 17712
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggggccggaaggcgtcaccga 152 ||||||||||||||||||||| Sbjct: 4425691 ggggccggaaggcgtcaccga 4425671
>gb|AC108043.3| Homo sapiens BAC clone RP11-270L13 from 4, complete sequence Length = 138020 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1307 atgtaatgatgtatattcttt 1327 ||||||||||||||||||||| Sbjct: 51342 atgtaatgatgtatattcttt 51362
>emb|CR396587.8| Zebrafish DNA sequence from clone CH211-261P15 in linkage group 16, complete sequence Length = 91165 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 ctggtctgaagaggaggtgtg 488 ||||||||||||||||||||| Sbjct: 77496 ctggtctgaagaggaggtgtg 77516
>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2 Length = 384550 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1310 taatgatgtatattctttgtg 1330 ||||||||||||||||||||| Sbjct: 98459 taatgatgtatattctttgtg 98439
>emb|CR293530.22| Zebrafish DNA sequence from clone CH211-129C13 in linkage group 1, complete sequence Length = 179015 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 ctggtctgaagaggaggtgtg 488 ||||||||||||||||||||| Sbjct: 89301 ctggtctgaagaggaggtgtg 89281
>emb|BX829643.1|CNS0A05Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZC03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1446 Score = 42.1 bits (21), Expect = 5.1 Identities = 60/73 (82%) Strand = Plus / Plus Query: 507 ccgatccatgttatgttgcatttcatgacgaagaatggggagttccagttcatgacgaca 566 |||||||||||||| | | || ||||| ||| ||||||| || |||||||| || ||| Sbjct: 825 ccgatccatgttatatagttttccatgatgaataatggggtgtgccagttcacgattaca 884 Query: 567 agaagttgtttga 579 ||| ||||||||| Sbjct: 885 agaggttgtttga 897
>gb|AC130536.4| Mus musculus BAC clone RP23-369M17 from 13, complete sequence Length = 188021 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 catggattttgacccttcatt 681 ||||||||||||||||||||| Sbjct: 187043 catggattttgacccttcatt 187063
>emb|AM233362.1| Francisella tularensis subsp. holarctica LVS complete genome Length = 1895994 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tcgcatcagcaacagcgacag 188 ||||||||||||||||||||| Sbjct: 983859 tcgcatcagcaacagcgacag 983839
>emb|AL845165.4| Mouse DNA sequence from clone RP23-281N9 on chromosome 2, complete sequence Length = 112789 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1292 ttgaacggcagcagcatgtaatgat 1316 ||||||| ||||||||||||||||| Sbjct: 82213 ttgaacgtcagcagcatgtaatgat 82237 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 210,929,607 Number of extensions: 11158815 Number of successful extensions: 220955 Number of sequences better than 10.0: 77 Number of HSP's gapped: 220942 Number of HSP's successfully gapped: 124 Length of query: 1349 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1326 Effective length of database: 18,503,978,556 Effective search space: 24536275565256 Effective search space used: 24536275565256 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)