Clone Name | FLbaf93i06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK099676:Os02g0745000 | 259 | 4e-69 | 2 | AK071023:Os09g0521500 | 107 | 2e-23 | 3 | AK121252:Os06g0179800 | 33 | 0.65 | 4 | AK065817:Os06g0179800 | 33 | 0.65 | 5 | AK068774:Os12g0210400 | 30 | 4.2 | 6 | Os07g0273700:Os07g0273700 | 29 | 7.2 | 7 | AK106822:Os02g0140400 | 29 | 7.2 | 8 | AK102169:Os03g0620400 | 29 | 9.4 | 9 | AK059672:Os12g0550600 | 29 | 9.4 |
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>AK099676:Os02g0745000 | Length = 264 Score = 259 bits (661), Expect = 4e-69 Identities = 141/260 (54%), Positives = 188/260 (72%), Gaps = 10/260 (3%) Frame = +1 Query: 397 LFAAEIGHVNTKEE-----SSNGGSFIRNILDKIGLGVLADPLGKNKLHEML-MKTPGLG 558 LFA EI +EE NGG+ +++ +D +GLGVLA+ LG+ KL E+L PGL Sbjct: 5 LFALEINPEKAREEFRAASQKNGGTGVKDFMDGMGLGVLAEQLGELKLGELLDTPPPGLD 64 Query: 559 EAVAISKLVQIVELQESNKFRRIVLDTPATGHTLNLLSATTLMEKLLGMANKAVN-MASS 735 EA+AISK++Q +E QE + FRRIV DT TGHTL LLS ++ +G K + +AS+ Sbjct: 65 EAIAISKVMQFLEAQEYSMFRRIVFDTAPTGHTLRLLSLPDFLDASIGKILKLRSKIASA 124 Query: 736 FPALKSAFGKD--QIDPA-KIEVLRKQIARVHELMQDPQSTEFIIVTIPTVMAITESSRF 906 A+KS FG++ Q D A K+E LR+++ +V EL +D +STEFIIVTIPTVMAI+ES+R Sbjct: 125 TSAIKSVFGQEVQQQDAANKLEQLRERMVQVRELFRDTESTEFIIVTIPTVMAISESARL 184 Query: 907 HASLKKDGAPATRLIVNQVLPPSTSDCRFCSTKRKEEARALNMISNDRELSGLELIQAPL 1086 H+SL+ + P RLIVNQ+LPPS+SDC+FC+ KRK++ RAL+MI ND EL GL LIQAPL Sbjct: 185 HSSLRNESVPVKRLIVNQILPPSSSDCKFCAIKRKDQTRALDMIRNDPELMGLNLIQAPL 244 Query: 1087 VDVEVRGAPALRFFSDVVWK 1146 VD+E+RG PAL+F D+VWK Sbjct: 245 VDMEIRGVPALKFLGDIVWK 264
>AK071023:Os09g0521500 | Length = 361 Score = 107 bits (268), Expect = 2e-23 Identities = 87/319 (27%), Positives = 159/319 (49%), Gaps = 11/319 (3%) Frame = +1 Query: 208 RYYVLGGKGGVGTTSMAASLAMKFANRGEPTLIVSMHPAHSLGDTFEQDLSGGNIVPVNG 387 ++ +GGKGGVG T+ ++ L++ A+ + L++S PAH+L D F+Q + + V G Sbjct: 25 KWVFVGGKGGVGKTTCSSILSILLASARQSVLVISTDPAHNLSDAFQQRFTKFPTL-VRG 83 Query: 388 VDSLFAAEIGHVNTKEESSNGGSFIRNILDKIGLGVLADPLGKNKLHEMLMKTPGLGEAV 567 ++L+A EI ++ +N G + L E+ PG+ EA+ Sbjct: 84 FNNLYAMEIDPKVENDDFANEGM-------------------EGFLSELTNAIPGVDEAM 124 Query: 568 AISKLVQIVELQESNKFRRIVLDTPATGHTLNLLS-ATTL---MEKLLGMANK---AVNM 726 + ++++++V+ + + +V DT TGHTL LL TL +EK++ + NK +N Sbjct: 125 SFAEMLKLVQTMD---YSVVVFDTAPTGHTLRLLQFPATLEKGLEKMMALKNKFGGLLNQ 181 Query: 727 ASSFPALKSAFGKDQIDPAKIEVLRKQIARVHELMQDPQSTEFIIVTIPTVMAITESSRF 906 A+ L +D + ++E ++ I +V+ +DP T F+ V IP +++ E+ R Sbjct: 182 ATRLFGLGDELNEDAM-LGRLEGMKDVIEQVNRQFKDPDLTTFVCVCIPEFLSLYETERL 240 Query: 907 HASLKKDGAPATRLIVNQVL-PPSTSDCRFCSTKRKEEARAL---NMISNDRELSGLELI 1074 L K A +I+NQVL + + + K + + + +M+ +D ++ L Sbjct: 241 VQELAKFEIDAHNIIINQVLFDEEAVESKLLKARIKMQQKYIDQFHMLYDDFNITKL--- 297 Query: 1075 QAPLVDVEVRGAPALRFFS 1131 PL+ EV G AL+ FS Sbjct: 298 --PLLPEEVCGVQALQNFS 314
>AK121252:Os06g0179800 | Length = 606 Score = 32.7 bits (73), Expect = 0.65 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +2 Query: 506 RWERISCMKC**KLLDLEKPLQFLSWYKLLNC 601 RWER++C ++ L+ + SWY LLNC Sbjct: 53 RWERVTCSSITGRVTALDLDAAYPSWYGLLNC 84
>AK065817:Os06g0179800 | Length = 194 Score = 32.7 bits (73), Expect = 0.65 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +2 Query: 506 RWERISCMKC**KLLDLEKPLQFLSWYKLLNC 601 RWER++C ++ L+ + SWY LLNC Sbjct: 53 RWERVTCSSITGRVTALDLDAAYPSWYGLLNC 84
>AK068774:Os12g0210400 | Length = 967 Score = 30.0 bits (66), Expect = 4.2 Identities = 20/63 (31%), Positives = 26/63 (41%) Frame = +1 Query: 184 GEMVAGTQRYYVLGGKGGVGTTSMAASLAMKFANRGEPTLIVSMHPAHSLGDTFEQDLSG 363 GE VA +R + G GG AAS +M +A P HP G + SG Sbjct: 902 GEAVAEIERIAKVAGAGGAAAAESAASDSMSYAASRTP-----RHPYGGGGGDSASEYSG 956 Query: 364 GNI 372 G + Sbjct: 957 GGL 959
>Os07g0273700:Os07g0273700 | Length = 1478 Score = 29.3 bits (64), Expect = 7.2 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -2 Query: 425 LTWPISAAKRESTPLTGTILPPLRSCSNVSPSECAGCIETMSV 297 L W A E L G I+P LR C ++ PS C + S+ Sbjct: 763 LLWHSKTALSEIDSLVGGIVPALRLCYDLLPSHLKQCFKFCSL 805
>AK106822:Os02g0140400 | Length = 429 Score = 29.3 bits (64), Expect = 7.2 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 9/85 (10%) Frame = +1 Query: 469 ILDKIGLGVLADPLGKNKLHEML---------MKTPGLGEAVAISKLVQIVELQESNKFR 621 +L KI + V+ DP+ + +LH+ + T E S ++I+ ES F Sbjct: 152 LLTKISINVVGDPIERERLHDAVDCLLSFVNKDGTVSTYECKRTSTWIEILNPCES--FS 209 Query: 622 RIVLDTPATGHTLNLLSATTLMEKL 696 +V+D P T ++L A L ++L Sbjct: 210 NMVVDYPYPECTSSVLQALVLFKEL 234
>AK102169:Os03g0620400 | Length = 519 Score = 28.9 bits (63), Expect = 9.4 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Frame = -1 Query: 636 IQNYAPKFIALLQFNNLYQLRNCNGFSKSRSFHQHF---MQLILSQRISKNSKPYLVQYI 466 IQ P F+A+++ +N+ R C K R HF Q I QR KN K Y + YI Sbjct: 241 IQPEIPVFVAIMKHSNVNSRRACLVIPK-RYASAHFPLESQTITLQRQGKNKKWYPMFYI 299
>AK059672:Os12g0550600 | Length = 85 Score = 28.9 bits (63), Expect = 9.4 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 6/57 (10%) Frame = -1 Query: 1146 FPDHVTEESEGRGASNLHINKWCLD*L*AAKLTIIAYHIQGACF------FLAFCRT 994 F DHV S G G SNL IN + KL + +I C +A CRT Sbjct: 4 FHDHVIRVSTGTGTSNLSIN--------STKLPNVLLNISPVCLQLLDCPLVAICRT 52 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 42,964,310 Number of extensions: 1011207 Number of successful extensions: 2865 Number of sequences better than 10.0: 9 Number of HSP's gapped: 2859 Number of HSP's successfully gapped: 9 Length of query: 474 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 370 Effective length of database: 11,235,591 Effective search space: 4157168670 Effective search space used: 4157168670 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)