ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf93i06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY110545.1| Zea mays CL31325_1 mRNA sequence 90 3e-14
2ref|NM_001054642.1| Oryza sativa (japonica cultivar-group) Os02g... 54 0.001
3dbj|AK099676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 0.001
4gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, co... 46 0.35
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.35
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.35
7gb|AC040918.7| Homo sapiens chromosome 15, clone RP11-684B21, co... 46 0.35
8gb|AC144928.17| Medicago truncatula clone mth2-8a18, complete se... 46 0.35
9dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.35
10dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.35
11dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.35
12emb|CR386790.1| Gallus gallus finished cDNA, clone ChEST38l19 46 0.35
13emb|BX930523.1| Gallus gallus finished cDNA, clone ChEST632j16 46 0.35
14gb|AC100956.9| Mus musculus chromosome 7, clone RP23-74B10, comp... 46 0.35
15emb|Z16588.1|HS112XA1 H. sapiens (D15S118) DNA segment containin... 46 0.35
16ref|NM_001037176.1| Gallus gallus mortality factor 4 like 1 (MOR... 46 0.35
17ref|NM_001037173.1| Gallus gallus mortality factor 4 like 1 (MOR... 46 0.35
18gb|AC133709.11| Medicago truncatula clone mth2-7b3, complete seq... 46 0.35
19ref|XM_739048.1| Plasmodium chabaudi chabaudi hypothetical prote... 44 1.4
20emb|CT963134.11| M.truncatula DNA sequence from clone MTH2-30E17... 42 5.4
21gb|CP000450.1| Nitrosomonas eutropha C71, complete genome 42 5.4
22gb|AC145022.29| Medicago truncatula clone mth2-8m24, complete se... 42 5.4
23ref|XM_001060061.1| PREDICTED: Rattus norvegicus nyctalopin (pre... 42 5.4
24ref|XM_228750.4| PREDICTED: Rattus norvegicus nyctalopin (predic... 42 5.4
25emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 42 5.4
26gb|AC140914.20| Medicago truncatula clone mth2-18h17, complete s... 42 5.4
27gb|AC142095.9| Medicago truncatula clone mth2-14c17, complete se... 42 5.4
28gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete s... 42 5.4
29gb|AC149572.14| Medicago truncatula clone mth2-116e22, complete ... 42 5.4
30gb|AC122163.20| Medicago truncatula clone mth2-16l2, complete se... 42 5.4
31gb|AC146720.23| Medicago truncatula clone mth2-17n5, complete se... 42 5.4
32gb|AC139743.15| Medicago truncatula clone mth2-16m2, complete se... 42 5.4
33gb|AC126008.36| Medicago truncatula clone mth2-13e5, complete se... 42 5.4
34gb|AC135959.22| Medicago truncatula clone mth2-26j19, complete s... 42 5.4
35gb|AC136518.3| Mus musculus BAC clone RP23-304K22 from chromosom... 42 5.4
36gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosom... 42 5.4
37gb|AC175028.7| Medicago truncatula clone mth2-7e22, complete seq... 42 5.4
38gb|AC171265.5| Medicago truncatula clone mth2-2j17, complete seq... 42 5.4
39gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete s... 42 5.4
40gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-3... 42 5.4
41gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-8... 42 5.4
42dbj|AK079663.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 42 5.4
43emb|CT009508.6| M.truncatula DNA sequence from clone MTH2-76H16 ... 42 5.4
44dbj|AK042355.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 5.4
45gb|AC171534.4| Medicago truncatula chromosome 7 BAC clone mth2-9... 42 5.4
46dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 5.4
47dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 5.4
48emb|AJ972473.1| Medicago truncatula partial NSP1 gene for Nodula... 42 5.4
49emb|CR936946.2| Medicago truncatula chromosome 5 clone mth2-77l2... 42 5.4
50gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete s... 42 5.4
51emb|BX548059.13| Zebrafish DNA sequence from clone DKEYP-80D11 i... 42 5.4
52gb|AC125473.12| Medicago truncatula clone mth2-8j13, complete se... 42 5.4
53dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic D... 42 5.4
54dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic D... 42 5.4
55dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic D... 42 5.4
56dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic D... 42 5.4
57gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete seq... 42 5.4
58gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete se... 42 5.4
59gb|AC126006.22| Medicago truncatula clone mth2-4c19, complete se... 42 5.4
60gb|AC137821.22| Medicago truncatula clone mth2-15o11, complete s... 42 5.4
61gb|AC133864.32| Medicago truncatula clone mth2-18d12, complete s... 42 5.4
62ref|XM_674813.1| Plasmodium berghei strain ANKA zinc finger prot... 42 5.4
63ref|XM_738235.1| Plasmodium chabaudi chabaudi zinc finger protei... 42 5.4
64gb|AC157537.16| Medicago truncatula clone mth2-124a3, complete s... 42 5.4
65gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete se... 42 5.4 
>gb|AY110545.1| Zea mays CL31325_1 mRNA sequence
          Length = 950
 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 120/145 (82%)
 Strand = Plus / Minus

                                                                        
Query: 878  tgatggcgattactgagtcatcaaggtttcatgcatctttaaagaaggatggtgcgccag 937
            |||||||  |||||||||||||||||||||| |  || ||||||||||||||||| |   
Sbjct: 563  tgatggcagttactgagtcatcaaggtttcacgagtcattaaagaaggatggtgcacaca 504

                                                                        
Query: 938  caacaaggcttatcgtaaatcaagtgttgccgccctctacatctgattgcagattctgtt 997
            ||| ||||||  || ||||||| |||||||| || ||| | || || |||||||||||| 
Sbjct: 503  caagaaggctcgtcataaatcaggtgttgccaccgtctgcgtcggactgcagattctgtg 444

                                     
Query: 998  ctacaaaacgcaaggaagaagcacg 1022
            || ||||||| | ||||||||||||
Sbjct: 443  ctgcaaaacggagggaagaagcacg 419
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>ref|NM_001054642.1| Oryza sativa (japonica cultivar-group) Os02g0745000 (Os02g0745000)
           mRNA, partial cds
          Length = 1220

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 842 aatcaactgaatttatcattgtgacgattcctacggtgatggc 884
           |||||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 489 aatcaactgaatttataattgtgactattccaacagtgatggc 531
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>dbj|AK099676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070D05, full
           insert sequence
          Length = 1220

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 842 aatcaactgaatttatcattgtgacgattcctacggtgatggc 884
           |||||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 489 aatcaactgaatttataattgtgactattccaacagtgatggc 531
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>gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, complete sequence
          Length = 175123

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 302    tcatagtttctatgcacccagca 324
              |||||||||||||||||||||||
Sbjct: 173728 tcatagtttctatgcacccagca 173706
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 1187     tacttatcttttgtgacagagggagtatttc 1217
                ||||||| ||||| |||||||||||||||||
Sbjct: 29863376 tacttatattttgggacagagggagtatttc 29863406
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 842      aatcaactgaatttatcattgtgacgattcc 872
                |||||||||||||||| |||||||| |||||
Sbjct: 31272060 aatcaactgaatttataattgtgactattcc 31272030



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 1187    tacttatcttttgtgacagagggagtatt 1215
               ||||||| ||||| |||||||||||||||
Sbjct: 6036937 tacttatattttgggacagagggagtatt 6036965
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>gb|AC040918.7| Homo sapiens chromosome 15, clone RP11-684B21, complete sequence
          Length = 175919

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 302   tcatagtttctatgcacccagca 324
             |||||||||||||||||||||||
Sbjct: 36243 tcatagtttctatgcacccagca 36221
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>gb|AC144928.17| Medicago truncatula clone mth2-8a18, complete sequence
          Length = 138948

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 1072  atccaagcaccacttgttgatgt 1094
             |||||||||||||||||||||||
Sbjct: 68401 atccaagcaccacttgttgatgt 68423
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>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1734_E02
          Length = 168566

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 842    aatcaactgaatttatcattgtgacgattcc 872
              |||||||||||||||| |||||||| |||||
Sbjct: 151903 aatcaactgaatttataattgtgactattcc 151873
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>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1118_G04
          Length = 134464

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 842   aatcaactgaatttatcattgtgacgattcc 872
             |||||||||||||||| |||||||| |||||
Sbjct: 41928 aatcaactgaatttataattgtgactattcc 41898
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>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0481E08
          Length = 171965

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 1187  tacttatcttttgtgacagagggagtatttc 1217
             ||||||| ||||| |||||||||||||||||
Sbjct: 58889 tacttatattttgggacagagggagtatttc 58919
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>emb|CR386790.1| Gallus gallus finished cDNA, clone ChEST38l19
          Length = 608

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 540 gaaaactcctggacttggagaag 562
           |||||||||||||||||||||||
Sbjct: 395 gaaaactcctggacttggagaag 417
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>emb|BX930523.1| Gallus gallus finished cDNA, clone ChEST632j16
          Length = 974

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 540 gaaaactcctggacttggagaag 562
           |||||||||||||||||||||||
Sbjct: 423 gaaaactcctggacttggagaag 445
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>gb|AC100956.9| Mus musculus chromosome 7, clone RP23-74B10, complete sequence
          Length = 245367

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 1198  tgtgacagagggagtatttcattataa 1224
             |||||||||||||| ||||||||||||
Sbjct: 29440 tgtgacagagggagcatttcattataa 29466
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>emb|Z16588.1|HS112XA1 H. sapiens (D15S118) DNA segment containing (CA) repeat; clone
           AFM112xa1; single read
          Length = 363

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 302 tcatagtttctatgcacccagca 324
           |||||||||||||||||||||||
Sbjct: 37  tcatagtttctatgcacccagca 15
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>ref|NM_001037176.1| Gallus gallus mortality factor 4 like 1 (MORF4L1), transcript
           variant 2, mRNA
          Length = 1503

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 540 gaaaactcctggacttggagaag 562
           |||||||||||||||||||||||
Sbjct: 368 gaaaactcctggacttggagaag 390
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>ref|NM_001037173.1| Gallus gallus mortality factor 4 like 1 (MORF4L1), transcript
           variant 1, mRNA
          Length = 1570

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 540 gaaaactcctggacttggagaag 562
           |||||||||||||||||||||||
Sbjct: 431 gaaaactcctggacttggagaag 453
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>gb|AC133709.11| Medicago truncatula clone mth2-7b3, complete sequence
          Length = 138950

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 1072  atccaagcaccacttgttgatgt 1094
             |||||||||||||||||||||||
Sbjct: 70548 atccaagcaccacttgttgatgt 70526
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>ref|XM_739048.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000723.00.0)
            partial mRNA
          Length = 3171

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 423  taatacaaaagaggaatcttctaatg 448
            ||||||||||||||||||||| ||||
Sbjct: 1224 taatacaaaagaggaatcttccaatg 1249
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>emb|CT963134.11| M.truncatula DNA sequence from clone MTH2-30E17 on chromosome 3,
             complete sequence
          Length = 129281

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 65838 agaagccgttgcaatttctaa 65818
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>gb|CP000450.1| Nitrosomonas eutropha C71, complete genome
          Length = 2661057

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1365    tttatctctgaattgaacaat 1385
               |||||||||||||||||||||
Sbjct: 1847307 tttatctctgaattgaacaat 1847287
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>gb|AC145022.29| Medicago truncatula clone mth2-8m24, complete sequence
          Length = 108504

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 83183 agaagccgttgcaatttctaa 83163
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>ref|XM_001060061.1| PREDICTED: Rattus norvegicus nyctalopin (predicted)
           (Nyx_predicted), mRNA
          Length = 1620

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  cctcgctgcctgccgccgcct 92
           |||||||||||||||||||||
Sbjct: 902 cctcgctgcctgccgccgcct 922
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>ref|XM_228750.4| PREDICTED: Rattus norvegicus nyctalopin (predicted)
           (Nyx_predicted), mRNA
          Length = 1620

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  cctcgctgcctgccgccgcct 92
           |||||||||||||||||||||
Sbjct: 902 cctcgctgcctgccgccgcct 922
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>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00
          Length = 1457619

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 827     ttatgcaagatccacaatcaa 847
               |||||||||||||||||||||
Sbjct: 1441203 ttatgcaagatccacaatcaa 1441183
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>gb|AC140914.20| Medicago truncatula clone mth2-18h17, complete sequence
          Length = 129792

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 47331 agaagccgttgcaatttctaa 47311
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>gb|AC142095.9| Medicago truncatula clone mth2-14c17, complete sequence
          Length = 110037

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 43179 agaagccgttgcaatttctaa 43159
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>gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete sequence
          Length = 104281

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 48664 agaagccgttgcaatttctaa 48644
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>gb|AC149572.14| Medicago truncatula clone mth2-116e22, complete sequence
          Length = 120017

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 39676 agaagccgttgcaatttctaa 39656
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>gb|AC122163.20| Medicago truncatula clone mth2-16l2, complete sequence
          Length = 117439

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 38405 agaagccgttgcaatttctaa 38385
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>gb|AC146720.23| Medicago truncatula clone mth2-17n5, complete sequence
          Length = 126477

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 70575 agaagccgttgcaatttctaa 70555
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>gb|AC139743.15| Medicago truncatula clone mth2-16m2, complete sequence
          Length = 85237

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 62254 agaagccgttgcaatttctaa 62274
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>gb|AC126008.36| Medicago truncatula clone mth2-13e5, complete sequence
          Length = 124889

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 73960 agaagccgttgcaatttctaa 73940
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>gb|AC135959.22| Medicago truncatula clone mth2-26j19, complete sequence
          Length = 95871

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 41482 agaagccgttgcaatttctaa 41502
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>gb|AC136518.3| Mus musculus BAC clone RP23-304K22 from chromosome 16, complete sequence
          Length = 206486

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 665    ttttatctgctacaactttaatgga 689
              |||||||||||||||||| ||||||
Sbjct: 114829 ttttatctgctacaacttcaatgga 114805
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>gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosome 17, complete
             sequence
          Length = 190724

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 663   ccttttatctgctacaacttt 683
             |||||||||||||||||||||
Sbjct: 88735 ccttttatctgctacaacttt 88715
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>gb|AC175028.7| Medicago truncatula clone mth2-7e22, complete sequence
          Length = 131012

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 558    agaagccgttgcaatttctaa 578
              |||||||||||||||||||||
Sbjct: 129807 agaagccgttgcaatttctaa 129827
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>gb|AC171265.5| Medicago truncatula clone mth2-2j17, complete sequence
          Length = 117361

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 58062 agaagccgttgcaatttctaa 58042



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 95133 agaagccgttgcaatttctaa 95153
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>gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete sequence
          Length = 139778

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 45530 agaagccgttgcaatttctaa 45550
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>gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-32i15, complete
            sequence
          Length = 96221

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 558  agaagccgttgcaatttctaa 578
            |||||||||||||||||||||
Sbjct: 4975 agaagccgttgcaatttctaa 4955
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>gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-85d15, complete sequence
          Length = 127331

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 558    agaagccgttgcaatttctaa 578
              |||||||||||||||||||||
Sbjct: 115434 agaagccgttgcaatttctaa 115454
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>dbj|AK079663.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330102D21 product:unclassifiable, full
            insert sequence
          Length = 2289

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 663  ccttttatctgctacaacttt 683
            |||||||||||||||||||||
Sbjct: 1276 ccttttatctgctacaacttt 1256
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>emb|CT009508.6| M.truncatula DNA sequence from clone MTH2-76H16 on chromosome 3,
             complete sequence
          Length = 133910

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 75654 agaagccgttgcaatttctaa 75634
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>dbj|AK042355.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630084N20 product:unclassifiable, full
            insert sequence
          Length = 2559

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 663  ccttttatctgctacaacttt 683
            |||||||||||||||||||||
Sbjct: 1322 ccttttatctgctacaacttt 1302
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>gb|AC171534.4| Medicago truncatula chromosome 7 BAC clone mth2-90a20, complete
             sequence
          Length = 88903

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 65130 agaagccgttgcaatttctaa 65110
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 1187     tacttatcttttgtgacagagggagtatt 1215
                ||||||| ||||| |||||||||||||||
Sbjct: 17590561 tacttatattttgggacagagggagtatt 17590589
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 1189     cttatcttttgtgacagagggagta 1213
                ||||| |||||||||||||||||||
Sbjct: 22910981 cttatattttgtgacagagggagta 22911005
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>emb|AJ972473.1| Medicago truncatula partial NSP1 gene for Nodulation Signaling Pathway
             1 protein
          Length = 63146

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 48211 agaagccgttgcaatttctaa 48191
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>emb|CR936946.2| Medicago truncatula chromosome 5 clone mth2-77l22, COMPLETE SEQUENCE
          Length = 115705

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 21068 agaagccgttgcaatttctaa 21088
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>gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete sequence
          Length = 130178

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 43589 agaagccgttgcaatttctaa 43569
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>emb|BX548059.13| Zebrafish DNA sequence from clone DKEYP-80D11 in linkage group 12,
             complete sequence
          Length = 205581

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1103  gaggcgcccctgccctcagat 1123
             |||||||||||||||||||||
Sbjct: 98541 gaggcgcccctgccctcagat 98561
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>gb|AC125473.12| Medicago truncatula clone mth2-8j13, complete sequence
          Length = 103966

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 558    agaagccgttgcaatttctaa 578
              |||||||||||||||||||||
Sbjct: 100191 agaagccgttgcaatttctaa 100211
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>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1019_E02
          Length = 121607

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1189   cttatcttttgtgacagagggagta 1213
              ||||| |||||||||||||||||||
Sbjct: 104248 cttatattttgtgacagagggagta 104272
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>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1006_A02
          Length = 175153

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1187 tacttatcttttgtgacagagggagtatt 1215
            ||||||| ||||| |||||||||||||||
Sbjct: 2419 tacttatattttgggacagagggagtatt 2447
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>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1003_F05
          Length = 147472

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 1187  tacttatcttttgtgacagagggagtatt 1215
             ||||||| ||||| |||||||||||||||
Sbjct: 57776 tacttatattttgggacagagggagtatt 57804
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>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1005_D12
          Length = 150588

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 1187  tacttatcttttgtgacagagggagtatt 1215
             ||||||| ||||| |||||||||||||||
Sbjct: 39283 tacttatattttgggacagagggagtatt 39311
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>gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete sequence
          Length = 144042

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 54862 agaagccgttgcaatttctaa 54842
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>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence
          Length = 129658

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 44317 agaagccgttgcaatttctaa 44337
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>gb|AC126006.22| Medicago truncatula clone mth2-4c19, complete sequence
          Length = 154378

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 62220 agaagccgttgcaatttctaa 62240
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>gb|AC137821.22| Medicago truncatula clone mth2-15o11, complete sequence
          Length = 117225

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 97118 agaagccgttgcaatttctaa 97098
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>gb|AC133864.32| Medicago truncatula clone mth2-18d12, complete sequence
          Length = 125734

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 558    agaagccgttgcaatttctaa 578
              |||||||||||||||||||||
Sbjct: 113355 agaagccgttgcaatttctaa 113375
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>ref|XM_674813.1| Plasmodium berghei strain ANKA zinc finger protein (PB001158.02.0)
           partial mRNA
          Length = 594

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 665 ttttatctgctacaactttaa 685
           |||||||||||||||||||||
Sbjct: 580 ttttatctgctacaactttaa 560
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>ref|XM_738235.1| Plasmodium chabaudi chabaudi zinc finger protein (PC000071.04.0)
           partial mRNA
          Length = 564

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 665 ttttatctgctacaactttaa 685
           |||||||||||||||||||||
Sbjct: 550 ttttatctgctacaactttaa 530
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>gb|AC157537.16| Medicago truncatula clone mth2-124a3, complete sequence
          Length = 112188

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 83804 agaagccgttgcaatttctaa 83784
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>gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete sequence
          Length = 122694

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   agaagccgttgcaatttctaa 578
             |||||||||||||||||||||
Sbjct: 40285 agaagccgttgcaatttctaa 40265


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 245,759,842
Number of extensions: 12440299
Number of successful extensions: 237060
Number of sequences better than 10.0: 65
Number of HSP's gapped: 237059
Number of HSP's successfully gapped: 67
Length of query: 1422
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1399
Effective length of database: 18,503,978,556
Effective search space: 25887065999844
Effective search space used: 25887065999844
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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