Clone Name | FLbaf90d24 |
---|---|
Clone Library Name | barley_pub |
>emb|CT831308.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA040L10, full insert sequence Length = 1217 Score = 632 bits (319), Expect = e-178 Identities = 805/967 (83%) Strand = Plus / Plus Query: 127 gcgcagccgcttgtgccaggggtcttcacgttcggcgactcgacggtcgacataggcaac 186 ||||||||||| ||||| | ||| | |||||||| ||||| |||| ||| |||| ||| Sbjct: 119 gcgcagccgctcgtgccggccgtcatgacgttcggtgactcatcggtggacgtaggtaac 178 Query: 187 aacgactacctccacaccctcatcaaggcggacttccctccctacggcagggacttcccc 246 || ||||||||| | ||| |||||||||| |||||||||||||||| ||||||||| Sbjct: 179 aatgactacctcaaaaccatcatcaaggcaaacttccctccctacggaagggacttcaag 238 Query: 247 aatcgcgtggccaccgggaggttttgcaacggcaagctggccaccgacatcactgctgat 306 || | || |||| |||||||| ||||||||||||||||| || || |||||||| || Sbjct: 239 aaccaggtacccacggggaggttctgcaacggcaagctggctactgatatcactgccgag 298 Query: 307 acacttgggttcacaagctacccgccggcatatctcagcccgcaggcgtcggggaagaac 366 || | ||||| ||||||| | || || ||||||||||| | ||||| ||||||||| Sbjct: 299 acgttggggtttgaaagctacgcacctgcgtatctcagcccagatgcgtcagggaagaac 358 Query: 367 cttctgatcggtgccaacttcgcgtcggctggatccggctactacgatcacacggcgctt 426 |||||||| || |||||||| || || || ||||| |||||||| || ||||| || ||| Sbjct: 359 cttctgattggagccaactttgcatctgcaggatctggctactatgaccacactgcactt 418 Query: 427 atgtatcatgccatccctttctcccaacaattggagtacttcagggagtaccagtccaag 486 |||||||||| || ||||| |||||||||||||||||||||| ||||||||| || ||| Sbjct: 419 ctgtatcatgctattcctttgtcccaacaattggagtacttcaaggagtaccaatctaag 478 Query: 487 ctgtcagcgtttgccgggagcagccaggccaagtccatcatcagcggctcgctgtacatc 546 ||| |||| | ||||| |||||||||||| |||| ||||||| |||||| |||||||| Sbjct: 479 ctggcagccgtggccggaagcagccaggcccagtcaatcatcaacggctcattgtacatc 538 Query: 547 gtcagcttcggtgcaagtgatttcgtgcagaactactacatcaaccctctgctcttcaag 606 ||||| |||||| || |||||||| ||||| ||||||||||| ||| | |||| |||| Sbjct: 539 atcagcgccggtgccagcgatttcgtccagaattactacatcaatcctttcctctacaag 598 Query: 607 acccagaccgtcgaccagttctcggaccgccttgtcagcatcttcgtcaacagtgcaaca 666 |||||||||| |||||||||||| |||||||| ||| |||||||| |||| | || Sbjct: 599 acccagaccgccgaccagttctccgaccgcctcgtcggcatcttcaaaaacaccgtggca 658 Query: 667 caactttacggcatgggagcgcggcgcatcgcggtgacgacgctgccgcccctgggctgc 726 ||||| ||| |||||||||| |||||||||| |||||| |||||||||| |||||||| Sbjct: 659 caactgtacagcatgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgc 718 Query: 727 ctccccgcggcgatcacgctgttcgggcacgggagcaccgggtgcgtgtcgaggctcaac 786 || || |||||||||||||||||||| |||| |||| ||||||||| |||||||||||| Sbjct: 719 ctaccggcggcgatcacgctgttcggctacggcagcagcgggtgcgtctcgaggctcaac 778 Query: 787 agcgactcccagaggttcaacgggaagatgagcgccgccgtgagctccctggcgaagcgg 846 |||||| |||||| |||||||| ||||||| || | |||| ||| || ||||| Sbjct: 779 agcgacgcccagaacttcaacggcaagatgaacgtcaccgtcgactcgctttcgaagacc 838 Query: 847 taccacgacctcaagatcgccgtattcgacatctacacgcccctctacagcctcgtcacc 906 ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 839 tactccgacctcaagatcgccgtgttcgacatctacacgcccctctacgacctcgtcacc 898 Query: 907 tcccctggagatcaagggttcacggaggcgaagcggggatgctgcgggacggggaaggtg 966 || ||| | ||||| ||||||||||||| | ||||||||||||||||||||| |||| Sbjct: 899 tctcctcaatcccaaggattcacggaggcgaggaggggatgctgcgggacggggacggtg 958 Query: 967 gagttcacggtgttcctctgcaaccccaagtcggtggggacgtgctcgaacgcgtcgacc 1026 ||| |||||| | || ||||||||||||||| | || || ||| |||||||| |||| Sbjct: 959 gagacgacggtgcttctgtgcaaccccaagtcgatcggcacctgcccgaacgcgacgacg 1018 Query: 1027 tacgtgttctgggacgccgtccacccgtcggaggcggccaaccaagtgatcgccgacgcc 1086 |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| || Sbjct: 1019 tacgtgttctgggacgccgtccacccgtcggaggcggcgaaccaggtgctcgccgactcc 1078 Query: 1087 ctcctcg 1093 ||||||| Sbjct: 1079 ctcctcg 1085
>ref|NM_001063343.1| Oryza sativa (japonica cultivar-group) Os06g0148200 (Os06g0148200) mRNA, complete cds Length = 1353 Score = 624 bits (315), Expect = e-175 Identities = 804/967 (83%) Strand = Plus / Plus Query: 127 gcgcagccgcttgtgccaggggtcttcacgttcggcgactcgacggtcgacataggcaac 186 ||||||||||| ||||| | ||| | |||||||| ||||| |||| ||| |||| ||| Sbjct: 118 gcgcagccgctcgtgccggccgtcatgacgttcggtgactcatcggtggacgtaggtaac 177 Query: 187 aacgactacctccacaccctcatcaaggcggacttccctccctacggcagggacttcccc 246 || ||||||||| | ||| |||||||||| |||||||||||||||| ||||||||| Sbjct: 178 aatgactacctcaaaaccatcatcaaggcaaacttccctccctacggaagggacttcaag 237 Query: 247 aatcgcgtggccaccgggaggttttgcaacggcaagctggccaccgacatcactgctgat 306 || | || |||| |||||||| ||||||||||||||||| || || |||||||| || Sbjct: 238 aaccaggtacccacggggaggttctgcaacggcaagctggctactgatatcactgccgag 297 Query: 307 acacttgggttcacaagctacccgccggcatatctcagcccgcaggcgtcggggaagaac 366 || | ||||| ||||||| | || || ||||||||||| | ||||| ||||||||| Sbjct: 298 acgttggggtttgaaagctacgcacctgcgtatctcagcccagatgcgtcagggaagaac 357 Query: 367 cttctgatcggtgccaacttcgcgtcggctggatccggctactacgatcacacggcgctt 426 |||||||| || |||||||| || || || ||||| |||||||| || ||||| || ||| Sbjct: 358 cttctgattggagccaactttgcatctgcaggatctggctactatgaccacactgcactt 417 Query: 427 atgtatcatgccatccctttctcccaacaattggagtacttcagggagtaccagtccaag 486 |||||||||| || ||||| |||||||||||||||||||||| ||||||||| || ||| Sbjct: 418 ctgtatcatgctattcctttgtcccaacaattggagtacttcaaggagtaccaatctaag 477 Query: 487 ctgtcagcgtttgccgggagcagccaggccaagtccatcatcagcggctcgctgtacatc 546 ||| |||| | ||||| |||||||||||| |||| ||||||| |||||| |||||||| Sbjct: 478 ctggcagccgtggccggaagcagccaggcccagtcaatcatcaacggctcattgtacatc 537 Query: 547 gtcagcttcggtgcaagtgatttcgtgcagaactactacatcaaccctctgctcttcaag 606 ||||| |||||| || |||||||| ||||| ||||||||||| ||| | |||| |||| Sbjct: 538 atcagcgccggtgccagcgatttcgtccagaattactacatcaatcctttcctctacaag 597 Query: 607 acccagaccgtcgaccagttctcggaccgccttgtcagcatcttcgtcaacagtgcaaca 666 |||||||||| |||||||||||| |||||||| ||| |||||||| |||| | || Sbjct: 598 acccagaccgccgaccagttctccgaccgcctcgtcggcatcttcaaaaacaccgtggca 657 Query: 667 caactttacggcatgggagcgcggcgcatcgcggtgacgacgctgccgcccctgggctgc 726 ||||| ||| |||||||||| |||||||||| |||||| |||||||||| |||||||| Sbjct: 658 caactgtacagcatgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgc 717 Query: 727 ctccccgcggcgatcacgctgttcgggcacgggagcaccgggtgcgtgtcgaggctcaac 786 || || |||||||||||||||||||| |||| |||| ||||||||| |||||||||||| Sbjct: 718 ctaccggcggcgatcacgctgttcggctacggcagcagcgggtgcgtctcgaggctcaac 777 Query: 787 agcgactcccagaggttcaacgggaagatgagcgccgccgtgagctccctggcgaagcgg 846 |||||| |||||| |||||||| ||||||| || | |||| ||| || ||||| Sbjct: 778 agcgacgcccagaacttcaacggcaagatgaacgtcaccgtcgactcgctttcgaagacc 837 Query: 847 taccacgacctcaagatcgccgtattcgacatctacacgcccctctacagcctcgtcacc 906 ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 838 tactccgacctcaagatcgccgtgttcgacatctacacgcccctctacgacctcgtcacc 897 Query: 907 tcccctggagatcaagggttcacggaggcgaagcggggatgctgcgggacggggaaggtg 966 || ||| | ||||| ||||||||||||| | |||||||||||||||| |||| |||| Sbjct: 898 tctcctcaatcccaaggattcacggaggcgaggaggggatgctgcgggacagggacggtg 957 Query: 967 gagttcacggtgttcctctgcaaccccaagtcggtggggacgtgctcgaacgcgtcgacc 1026 ||| |||||| | || ||||||||||||||| | || || ||| |||||||| |||| Sbjct: 958 gagacgacggtgcttctgtgcaaccccaagtcgatcggcacctgcccgaacgcgacgacg 1017 Query: 1027 tacgtgttctgggacgccgtccacccgtcggaggcggccaaccaagtgatcgccgacgcc 1086 |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| || Sbjct: 1018 tacgtgttctgggacgccgtccacccgtcggaggcggcgaaccaggtgctcgccgactcc 1077 Query: 1087 ctcctcg 1093 ||||||| Sbjct: 1078 ctcctcg 1084
>dbj|AK109420.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D07, full insert sequence Length = 1257 Score = 624 bits (315), Expect = e-175 Identities = 804/967 (83%) Strand = Plus / Plus Query: 127 gcgcagccgcttgtgccaggggtcttcacgttcggcgactcgacggtcgacataggcaac 186 ||||||||||| ||||| | ||| | |||||||| ||||| |||| ||| |||| ||| Sbjct: 137 gcgcagccgctcgtgccggccgtcatgacgttcggtgactcatcggtggacgtaggtaac 196 Query: 187 aacgactacctccacaccctcatcaaggcggacttccctccctacggcagggacttcccc 246 || ||||||||| | ||| |||||||||| |||||||||||||||| ||||||||| Sbjct: 197 aatgactacctcaaaaccatcatcaaggcaaacttccctccctacggaagggacttcaag 256 Query: 247 aatcgcgtggccaccgggaggttttgcaacggcaagctggccaccgacatcactgctgat 306 || | || |||| |||||||| ||||||||||||||||| || || |||||||| || Sbjct: 257 aaccaggtacccacggggaggttctgcaacggcaagctggctactgatatcactgccgag 316 Query: 307 acacttgggttcacaagctacccgccggcatatctcagcccgcaggcgtcggggaagaac 366 || | ||||| ||||||| | || || ||||||||||| | ||||| ||||||||| Sbjct: 317 acgttggggtttgaaagctacgcacctgcgtatctcagcccagatgcgtcagggaagaac 376 Query: 367 cttctgatcggtgccaacttcgcgtcggctggatccggctactacgatcacacggcgctt 426 |||||||| || |||||||| || || || ||||| |||||||| || ||||| || ||| Sbjct: 377 cttctgattggagccaactttgcatctgcaggatctggctactatgaccacactgcactt 436 Query: 427 atgtatcatgccatccctttctcccaacaattggagtacttcagggagtaccagtccaag 486 |||||||||| || ||||| |||||||||||||||||||||| ||||||||| || ||| Sbjct: 437 ctgtatcatgctattcctttgtcccaacaattggagtacttcaaggagtaccaatctaag 496 Query: 487 ctgtcagcgtttgccgggagcagccaggccaagtccatcatcagcggctcgctgtacatc 546 ||| |||| | ||||| |||||||||||| |||| ||||||| |||||| |||||||| Sbjct: 497 ctggcagccgtggccggaagcagccaggcccagtcaatcatcaacggctcattgtacatc 556 Query: 547 gtcagcttcggtgcaagtgatttcgtgcagaactactacatcaaccctctgctcttcaag 606 ||||| |||||| || |||||||| ||||| ||||||||||| ||| | |||| |||| Sbjct: 557 atcagcgccggtgccagcgatttcgtccagaattactacatcaatcctttcctctacaag 616 Query: 607 acccagaccgtcgaccagttctcggaccgccttgtcagcatcttcgtcaacagtgcaaca 666 |||||||||| |||||||||||| |||||||| ||| |||||||| |||| | || Sbjct: 617 acccagaccgccgaccagttctccgaccgcctcgtcggcatcttcaaaaacaccgtggca 676 Query: 667 caactttacggcatgggagcgcggcgcatcgcggtgacgacgctgccgcccctgggctgc 726 ||||| ||| |||||||||| |||||||||| |||||| |||||||||| |||||||| Sbjct: 677 caactgtacagcatgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgc 736 Query: 727 ctccccgcggcgatcacgctgttcgggcacgggagcaccgggtgcgtgtcgaggctcaac 786 || || |||||||||||||||||||| |||| |||| ||||||||| |||||||||||| Sbjct: 737 ctaccggcggcgatcacgctgttcggctacggcagcagcgggtgcgtctcgaggctcaac 796 Query: 787 agcgactcccagaggttcaacgggaagatgagcgccgccgtgagctccctggcgaagcgg 846 |||||| |||||| |||||||| ||||||| || | |||| ||| || ||||| Sbjct: 797 agcgacgcccagaacttcaacggcaagatgaacgtcaccgtcgactcgctttcgaagacc 856 Query: 847 taccacgacctcaagatcgccgtattcgacatctacacgcccctctacagcctcgtcacc 906 ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 857 tactccgacctcaagatcgccgtgttcgacatctacacgcccctctacgacctcgtcacc 916 Query: 907 tcccctggagatcaagggttcacggaggcgaagcggggatgctgcgggacggggaaggtg 966 || ||| | ||||| ||||||||||||| | |||||||||||||||| |||| |||| Sbjct: 917 tctcctcaatcccaaggattcacggaggcgaggaggggatgctgcgggacagggacggtg 976 Query: 967 gagttcacggtgttcctctgcaaccccaagtcggtggggacgtgctcgaacgcgtcgacc 1026 ||| |||||| | || ||||||||||||||| | || || ||| |||||||| |||| Sbjct: 977 gagacgacggtgcttctgtgcaaccccaagtcgatcggcacctgcccgaacgcgacgacg 1036 Query: 1027 tacgtgttctgggacgccgtccacccgtcggaggcggccaaccaagtgatcgccgacgcc 1086 |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| || Sbjct: 1037 tacgtgttctgggacgccgtccacccgtcggaggcggcgaaccaggtgctcgccgactcc 1096 Query: 1087 ctcctcg 1093 ||||||| Sbjct: 1097 ctcctcg 1103
>dbj|AK060175.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A01, full insert sequence Length = 1353 Score = 624 bits (315), Expect = e-175 Identities = 804/967 (83%) Strand = Plus / Plus Query: 127 gcgcagccgcttgtgccaggggtcttcacgttcggcgactcgacggtcgacataggcaac 186 ||||||||||| ||||| | ||| | |||||||| ||||| |||| ||| |||| ||| Sbjct: 118 gcgcagccgctcgtgccggccgtcatgacgttcggtgactcatcggtggacgtaggtaac 177 Query: 187 aacgactacctccacaccctcatcaaggcggacttccctccctacggcagggacttcccc 246 || ||||||||| | ||| |||||||||| |||||||||||||||| ||||||||| Sbjct: 178 aatgactacctcaaaaccatcatcaaggcaaacttccctccctacggaagggacttcaag 237 Query: 247 aatcgcgtggccaccgggaggttttgcaacggcaagctggccaccgacatcactgctgat 306 || | || |||| |||||||| ||||||||||||||||| || || |||||||| || Sbjct: 238 aaccaggtacccacggggaggttctgcaacggcaagctggctactgatatcactgccgag 297 Query: 307 acacttgggttcacaagctacccgccggcatatctcagcccgcaggcgtcggggaagaac 366 || | ||||| ||||||| | || || ||||||||||| | ||||| ||||||||| Sbjct: 298 acgttggggtttgaaagctacgcacctgcgtatctcagcccagatgcgtcagggaagaac 357 Query: 367 cttctgatcggtgccaacttcgcgtcggctggatccggctactacgatcacacggcgctt 426 |||||||| || |||||||| || || || ||||| |||||||| || ||||| || ||| Sbjct: 358 cttctgattggagccaactttgcatctgcaggatctggctactatgaccacactgcactt 417 Query: 427 atgtatcatgccatccctttctcccaacaattggagtacttcagggagtaccagtccaag 486 |||||||||| || ||||| |||||||||||||||||||||| ||||||||| || ||| Sbjct: 418 ctgtatcatgctattcctttgtcccaacaattggagtacttcaaggagtaccaatctaag 477 Query: 487 ctgtcagcgtttgccgggagcagccaggccaagtccatcatcagcggctcgctgtacatc 546 ||| |||| | ||||| |||||||||||| |||| ||||||| |||||| |||||||| Sbjct: 478 ctggcagccgtggccggaagcagccaggcccagtcaatcatcaacggctcattgtacatc 537 Query: 547 gtcagcttcggtgcaagtgatttcgtgcagaactactacatcaaccctctgctcttcaag 606 ||||| |||||| || |||||||| ||||| ||||||||||| ||| | |||| |||| Sbjct: 538 atcagcgccggtgccagcgatttcgtccagaattactacatcaatcctttcctctacaag 597 Query: 607 acccagaccgtcgaccagttctcggaccgccttgtcagcatcttcgtcaacagtgcaaca 666 |||||||||| |||||||||||| |||||||| ||| |||||||| |||| | || Sbjct: 598 acccagaccgccgaccagttctccgaccgcctcgtcggcatcttcaaaaacaccgtggca 657 Query: 667 caactttacggcatgggagcgcggcgcatcgcggtgacgacgctgccgcccctgggctgc 726 ||||| ||| |||||||||| |||||||||| |||||| |||||||||| |||||||| Sbjct: 658 caactgtacagcatgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgc 717 Query: 727 ctccccgcggcgatcacgctgttcgggcacgggagcaccgggtgcgtgtcgaggctcaac 786 || || |||||||||||||||||||| |||| |||| ||||||||| |||||||||||| Sbjct: 718 ctaccggcggcgatcacgctgttcggctacggcagcagcgggtgcgtctcgaggctcaac 777 Query: 787 agcgactcccagaggttcaacgggaagatgagcgccgccgtgagctccctggcgaagcgg 846 |||||| |||||| |||||||| ||||||| || | |||| ||| || ||||| Sbjct: 778 agcgacgcccagaacttcaacggcaagatgaacgtcaccgtcgactcgctttcgaagacc 837 Query: 847 taccacgacctcaagatcgccgtattcgacatctacacgcccctctacagcctcgtcacc 906 ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 838 tactccgacctcaagatcgccgtgttcgacatctacacgcccctctacgacctcgtcacc 897 Query: 907 tcccctggagatcaagggttcacggaggcgaagcggggatgctgcgggacggggaaggtg 966 || ||| | ||||| ||||||||||||| | |||||||||||||||| |||| |||| Sbjct: 898 tctcctcaatcccaaggattcacggaggcgaggaggggatgctgcgggacagggacggtg 957 Query: 967 gagttcacggtgttcctctgcaaccccaagtcggtggggacgtgctcgaacgcgtcgacc 1026 ||| |||||| | || ||||||||||||||| | || || ||| |||||||| |||| Sbjct: 958 gagacgacggtgcttctgtgcaaccccaagtcgatcggcacctgcccgaacgcgacgacg 1017 Query: 1027 tacgtgttctgggacgccgtccacccgtcggaggcggccaaccaagtgatcgccgacgcc 1086 |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| || Sbjct: 1018 tacgtgttctgggacgccgtccacccgtcggaggcggcgaaccaggtgctcgccgactcc 1077 Query: 1087 ctcctcg 1093 ||||||| Sbjct: 1078 ctcctcg 1084
>dbj|AK073593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046C23, full insert sequence Length = 1246 Score = 601 bits (303), Expect = e-168 Identities = 802/967 (82%), Gaps = 1/967 (0%) Strand = Plus / Plus Query: 127 gcgcagccgcttgtgccaggggtcttcacgttcggcgactcgacggtcgacataggcaac 186 ||||||||||| ||||| | ||| | |||||||| ||||| |||| ||| |||| ||| Sbjct: 123 gcgcagccgctcgtgccggccgtcatgacgttcggtgactcatcggtggacgtaggtaac 182 Query: 187 aacgactacctccacaccctcatcaaggcggacttccctccctacggcagggacttcccc 246 || ||||||||| | ||| |||||||||| |||||||||||||||| ||||||||| Sbjct: 183 aatgactacctcaaaaccatcatcaaggcaaacttccctccctacggaagggacttcaag 242 Query: 247 aatcgcgtggccaccgggaggttttgcaacggcaagctggccaccgacatcactgctgat 306 || | || |||| |||||||| ||||||||||||||||| || || |||||||| || Sbjct: 243 aaccaggtacccacggggaggttctgcaacggcaagctggctactgatatcactgccgag 302 Query: 307 acacttgggttcacaagctacccgccggcatatctcagcccgcaggcgtcggggaagaac 366 || | ||||| ||||||| | || || ||||||||||| | ||||| ||||||||| Sbjct: 303 acgttggggtttgaaagctacgcacctgcgtatctcagcccagatgcgtcagggaagaac 362 Query: 367 cttctgatcggtgccaacttcgcgtcggctggatccggctactacgatcacacggcgctt 426 |||||||| || |||||||| || || || ||||| |||||||| || ||||| || ||| Sbjct: 363 cttctgattggagccaactttgcatctgcaggatctggctactatgaccacactgcactt 422 Query: 427 atgtatcatgccatccctttctcccaacaattggagtacttcagggagtaccagtccaag 486 |||||||||| || ||||| |||||||||||||||||||||| ||||||||| || ||| Sbjct: 423 ctgtatcatgctattcctttgtcccaacaattggagtacttcaaggagtaccaatctaag 482 Query: 487 ctgtcagcgtttgccgggagcagccaggccaagtccatcatcagcggctcgctgtacatc 546 ||| |||| | ||||| |||||||||||| |||| ||||||| |||||| |||||||| Sbjct: 483 ctggcagccgtggccggaagcagccaggcccagtcaatcatcaacggctcattgtacatc 542 Query: 547 gtcagcttcggtgcaagtgatttcgtgcagaactactacatcaaccctctgctcttcaag 606 ||||| |||||| || |||||||| ||||| ||||||||||| ||| | |||| |||| Sbjct: 543 atcagcgccggtgccagcgatttcgtccagaattactacatcaatcctttcctctacaag 602 Query: 607 acccagaccgtcgaccagttctcggaccgccttgtcagcatcttcgtcaacagtgcaaca 666 |||||||||| |||||||||||| |||||||| ||| ||||||| |||| | || Sbjct: 603 acccagaccgccgaccagttctccgaccgcctcgtcgacatcttcaaaaacaccgtggca 662 Query: 667 caactttacggcatgggagcgcggcgcatcgcggtgacgacgctgccgcccctgggctgc 726 ||||| ||| |||||||||| |||||||||| |||||| |||||||||| |||||||| Sbjct: 663 caactgtacagcatgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgc 722 Query: 727 ctccccgcggcgatcacgctgttcgggcacgggagcaccgggtgcgtgtcgaggctcaac 786 || || |||||||||||||||||||| |||| |||| ||||||||| |||||||||||| Sbjct: 723 ctaccggcggcgatcacgctgttcggctacggcagcagcgggtgcgtctcgaggctcaac 782 Query: 787 agcgactcccagaggttcaacgggaagatgagcgccgccgtgagctccctggcgaagcgg 846 |||||| ||||| |||||||| ||||||| || | |||| ||| || ||||| Sbjct: 783 agcgac-gccagaacttcaacggcaagatgaacgtcaccgtcgactcgctttcgaagacc 841 Query: 847 taccacgacctcaagatcgccgtattcgacatctacacgcccctctacagcctcgtcacc 906 ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 842 tactccgacctcaagatcgccgtgttcgacatctacacgcccctctacgacctcgtcacc 901 Query: 907 tcccctggagatcaagggttcacggaggcgaagcggggatgctgcgggacggggaaggtg 966 || ||| | ||||| ||||||||||||| | |||||||||||||||| |||| |||| Sbjct: 902 tctcctcaatcccaaggattcacggaggcgaggaggggatgctgcgggacagggacggtg 961 Query: 967 gagttcacggtgttcctctgcaaccccaagtcggtggggacgtgctcgaacgcgtcgacc 1026 ||| |||||| | || ||||||||||||||| | || || ||| |||||||| |||| Sbjct: 962 gagacgacggtgcttctgtgcaaccccaagtcgatcggcacctgcccgaacgcgacgacg 1021 Query: 1027 tacgtgttctgggacgccgtccacccgtcggaggcggccaaccaagtgatcgccgacgcc 1086 |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| || Sbjct: 1022 tacgtgttctgggacgccgtccacccgtcggaggcggcgaaccaggtgctcgccgactcc 1081 Query: 1087 ctcctcg 1093 ||||||| Sbjct: 1082 ctcctcg 1088
>gb|AY194234.1| Oryza sativa (japonica cultivar-group) putative lipase (LIP1) gene, complete cds Length = 2664 Score = 194 bits (98), Expect = 6e-46 Identities = 206/242 (85%) Strand = Plus / Plus Query: 667 caactttacggcatgggagcgcggcgcatcgcggtgacgacgctgccgcccctgggctgc 726 ||||| ||| |||||||||| |||||||||| |||||| |||||||||| |||||||| Sbjct: 1819 caactgtacagcatgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgc 1878 Query: 727 ctccccgcggcgatcacgctgttcgggcacgggagcaccgggtgcgtgtcgaggctcaac 786 || || |||||||||||||||||||| |||| |||| ||||||||| |||||||||||| Sbjct: 1879 ctaccggcggcgatcacgctgttcggctacggcagcagcgggtgcgtctcgaggctcaac 1938 Query: 787 agcgactcccagaggttcaacgggaagatgagcgccgccgtgagctccctggcgaagcgg 846 |||||| |||||| |||||||| ||||||| || | |||| ||| || ||||| Sbjct: 1939 agcgacgcccagaacttcaacggcaagatgaacgtcaccgtcgactcgctttcgaagacc 1998 Query: 847 taccacgacctcaagatcgccgtattcgacatctacacgcccctctacagcctcgtcacc 906 ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 1999 tactccgacctcaagatcgccgtgttcgacatctacacgcccctctacgacctcgtcacc 2058 Query: 907 tc 908 || Sbjct: 2059 tc 2060 Score = 180 bits (91), Expect = 9e-42 Identities = 187/219 (85%) Strand = Plus / Plus Query: 433 catgccatccctttctcccaacaattggagtacttcagggagtaccagtccaagctgtca 492 ||||| || ||||| || ||||||||||||||||||| ||||||||| || |||||| || Sbjct: 1451 catgctattcctttgtctcaacaattggagtacttcaaggagtaccaatctaagctggca 1510 Query: 493 gcgtttgccgggagcagccaggccaagtccatcatcagcggctcgctgtacatcgtcagc 552 || | ||||| |||||||||||| |||| ||||||| |||||| |||||||| ||||| Sbjct: 1511 gccgtggccggaagcagccaggcccagtcaatcatcaacggctcattgtacatcatcagc 1570 Query: 553 ttcggtgcaagtgatttcgtgcagaactactacatcaaccctctgctcttcaagacccag 612 |||||| || |||||||| ||||| ||||||||||| ||| | |||| |||||||||| Sbjct: 1571 gccggtgccagcgatttcgtccagaattactacatcaatcctttcctctacaagacccag 1630 Query: 613 accgtcgaccagttctcggaccgccttgtcagcatcttc 651 |||| |||||||||||| |||||||| ||| |||||||| Sbjct: 1631 accgccgaccagttctccgaccgcctcgtcggcatcttc 1669 Score = 168 bits (85), Expect = 3e-38 Identities = 148/169 (87%) Strand = Plus / Plus Query: 925 ttcacggaggcgaagcggggatgctgcgggacggggaaggtggagttcacggtgttcctc 984 ||||||||||||| | |||||||||||||||| |||| ||||||| |||||| | || Sbjct: 2239 ttcacggaggcgaggaggggatgctgcgggacagggacggtggagacgacggtgcttctg 2298 Query: 985 tgcaaccccaagtcggtggggacgtgctcgaacgcgtcgacctacgtgttctgggacgcc 1044 ||||||||||||||| | || || ||| |||||||| |||| |||||||||||||||||| Sbjct: 2299 tgcaaccccaagtcgatcggcacctgcccgaacgcgacgacgtacgtgttctgggacgcc 2358 Query: 1045 gtccacccgtcggaggcggccaaccaagtgatcgccgacgccctcctcg 1093 |||||||||||||||||||| ||||| ||| |||||||| ||||||||| Sbjct: 2359 gtccacccgtcggaggcggcgaaccaggtgctcgccgactccctcctcg 2407 Score = 93.7 bits (47), Expect = 2e-15 Identities = 143/175 (81%) Strand = Plus / Plus Query: 127 gcgcagccgcttgtgccaggggtcttcacgttcggcgactcgacggtcgacataggcaac 186 ||||||||||| ||||| | ||| | |||||||| ||||| |||| ||| |||| ||| Sbjct: 831 gcgcagccgctcgtgccggccgtcatgacgttcggtgactcatcggtggacgtaggtaac 890 Query: 187 aacgactacctccacaccctcatcaaggcggacttccctccctacggcagggacttcccc 246 || ||||||||| | ||| |||||||||| |||||||||||||||| ||||||||| Sbjct: 891 aatgactacctcaaaaccatcatcaaggcaaacttccctccctacggaagggacttcaag 950 Query: 247 aatcgcgtggccaccgggaggttttgcaacggcaagctggccaccgacatcactg 301 || | || |||| |||||||| ||||||||||||||||| || || ||||||| Sbjct: 951 aaccaggtacccacggggaggttctgcaacggcaagctggctactgatatcactg 1005 Score = 63.9 bits (32), Expect = 1e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 337 tatctcagcccgcaggcgtcggggaagaaccttctgatcggtgccaacttcgcgtcggct 396 ||||||||||| | ||||| ||||||||||||||||| || |||||||| || || || Sbjct: 1146 tatctcagcccagatgcgtcagggaagaaccttctgattggagccaactttgcatctgca 1205 Query: 397 ggatccggctactacgatcacacggcgcttatgtat 432 ||||| |||||||| || ||||| || ||| ||||| Sbjct: 1206 ggatctggctactatgaccacactgcacttctgtat 1241
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 194 bits (98), Expect = 6e-46 Identities = 206/242 (85%) Strand = Plus / Plus Query: 667 caactttacggcatgggagcgcggcgcatcgcggtgacgacgctgccgcccctgggctgc 726 ||||| ||| |||||||||| |||||||||| |||||| |||||||||| |||||||| Sbjct: 2515882 caactgtacagcatgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgc 2515941 Query: 727 ctccccgcggcgatcacgctgttcgggcacgggagcaccgggtgcgtgtcgaggctcaac 786 || || |||||||||||||||||||| |||| |||| ||||||||| |||||||||||| Sbjct: 2515942 ctaccggcggcgatcacgctgttcggctacggcagcagcgggtgcgtctcgaggctcaac 2516001 Query: 787 agcgactcccagaggttcaacgggaagatgagcgccgccgtgagctccctggcgaagcgg 846 |||||| |||||| |||||||| ||||||| || | |||| ||| || ||||| Sbjct: 2516002 agcgacgcccagaacttcaacggcaagatgaacgtcaccgtcgactcgctttcgaagacc 2516061 Query: 847 taccacgacctcaagatcgccgtattcgacatctacacgcccctctacagcctcgtcacc 906 ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 2516062 tactccgacctcaagatcgccgtgttcgacatctacacgcccctctacgacctcgtcacc 2516121 Query: 907 tc 908 || Sbjct: 2516122 tc 2516123 Score = 188 bits (95), Expect = 4e-44 Identities = 188/219 (85%) Strand = Plus / Plus Query: 433 catgccatccctttctcccaacaattggagtacttcagggagtaccagtccaagctgtca 492 ||||| || ||||| |||||||||||||||||||||| ||||||||| || |||||| || Sbjct: 2515514 catgctattcctttgtcccaacaattggagtacttcaaggagtaccaatctaagctggca 2515573 Query: 493 gcgtttgccgggagcagccaggccaagtccatcatcagcggctcgctgtacatcgtcagc 552 || | ||||| |||||||||||| |||| ||||||| |||||| |||||||| ||||| Sbjct: 2515574 gccgtggccggaagcagccaggcccagtcaatcatcaacggctcattgtacatcatcagc 2515633 Query: 553 ttcggtgcaagtgatttcgtgcagaactactacatcaaccctctgctcttcaagacccag 612 |||||| || |||||||| ||||| ||||||||||| ||| | |||| |||||||||| Sbjct: 2515634 gccggtgccagcgatttcgtccagaattactacatcaatcctttcctctacaagacccag 2515693 Query: 613 accgtcgaccagttctcggaccgccttgtcagcatcttc 651 |||| |||||||||||| |||||||| ||| |||||||| Sbjct: 2515694 accgccgaccagttctccgaccgcctcgtcggcatcttc 2515732 Score = 168 bits (85), Expect = 3e-38 Identities = 148/169 (87%) Strand = Plus / Plus Query: 925 ttcacggaggcgaagcggggatgctgcgggacggggaaggtggagttcacggtgttcctc 984 ||||||||||||| | |||||||||||||||| |||| ||||||| |||||| | || Sbjct: 2516302 ttcacggaggcgaggaggggatgctgcgggacagggacggtggagacgacggtgcttctg 2516361 Query: 985 tgcaaccccaagtcggtggggacgtgctcgaacgcgtcgacctacgtgttctgggacgcc 1044 ||||||||||||||| | || || ||| |||||||| |||| |||||||||||||||||| Sbjct: 2516362 tgcaaccccaagtcgatcggcacctgcccgaacgcgacgacgtacgtgttctgggacgcc 2516421 Query: 1045 gtccacccgtcggaggcggccaaccaagtgatcgccgacgccctcctcg 1093 |||||||||||||||||||| ||||| ||| |||||||| ||||||||| Sbjct: 2516422 gtccacccgtcggaggcggcgaaccaggtgctcgccgactccctcctcg 2516470 Score = 93.7 bits (47), Expect = 2e-15 Identities = 143/175 (81%) Strand = Plus / Plus Query: 127 gcgcagccgcttgtgccaggggtcttcacgttcggcgactcgacggtcgacataggcaac 186 ||||||||||| ||||| | ||| | |||||||| ||||| |||| ||| |||| ||| Sbjct: 2514894 gcgcagccgctcgtgccggccgtcatgacgttcggtgactcatcggtggacgtaggtaac 2514953 Query: 187 aacgactacctccacaccctcatcaaggcggacttccctccctacggcagggacttcccc 246 || ||||||||| | ||| |||||||||| |||||||||||||||| ||||||||| Sbjct: 2514954 aatgactacctcaaaaccatcatcaaggcaaacttccctccctacggaagggacttcaag 2515013 Query: 247 aatcgcgtggccaccgggaggttttgcaacggcaagctggccaccgacatcactg 301 || | || |||| |||||||| ||||||||||||||||| || || ||||||| Sbjct: 2515014 aaccaggtacccacggggaggttctgcaacggcaagctggctactgatatcactg 2515068 Score = 63.9 bits (32), Expect = 1e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 337 tatctcagcccgcaggcgtcggggaagaaccttctgatcggtgccaacttcgcgtcggct 396 ||||||||||| | ||||| ||||||||||||||||| || |||||||| || || || Sbjct: 2515209 tatctcagcccagatgcgtcagggaagaaccttctgattggagccaactttgcatctgca 2515268 Query: 397 ggatccggctactacgatcacacggcgcttatgtat 432 ||||| |||||||| || ||||| || ||| ||||| Sbjct: 2515269 ggatctggctactatgaccacactgcacttctgtat 2515304 Score = 50.1 bits (25), Expect = 0.022 Identities = 31/33 (93%) Strand = Plus / Plus Query: 852 cgacctcaagatcgccgtattcgacatctacac 884 |||||||||||||||| | |||||||||||||| Sbjct: 2547512 cgacctcaagatcgccatcttcgacatctacac 2547544
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 194 bits (98), Expect = 6e-46 Identities = 206/242 (85%) Strand = Plus / Plus Query: 667 caactttacggcatgggagcgcggcgcatcgcggtgacgacgctgccgcccctgggctgc 726 ||||| ||| |||||||||| |||||||||| |||||| |||||||||| |||||||| Sbjct: 147340 caactgtacagcatgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgc 147399 Query: 727 ctccccgcggcgatcacgctgttcgggcacgggagcaccgggtgcgtgtcgaggctcaac 786 || || |||||||||||||||||||| |||| |||| ||||||||| |||||||||||| Sbjct: 147400 ctaccggcggcgatcacgctgttcggctacggcagcagcgggtgcgtctcgaggctcaac 147459 Query: 787 agcgactcccagaggttcaacgggaagatgagcgccgccgtgagctccctggcgaagcgg 846 |||||| |||||| |||||||| ||||||| || | |||| ||| || ||||| Sbjct: 147460 agcgacgcccagaacttcaacggcaagatgaacgtcaccgtcgactcgctttcgaagacc 147519 Query: 847 taccacgacctcaagatcgccgtattcgacatctacacgcccctctacagcctcgtcacc 906 ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 147520 tactccgacctcaagatcgccgtgttcgacatctacacgcccctctacgacctcgtcacc 147579 Query: 907 tc 908 || Sbjct: 147580 tc 147581 Score = 188 bits (95), Expect = 4e-44 Identities = 188/219 (85%) Strand = Plus / Plus Query: 433 catgccatccctttctcccaacaattggagtacttcagggagtaccagtccaagctgtca 492 ||||| || ||||| |||||||||||||||||||||| ||||||||| || |||||| || Sbjct: 146972 catgctattcctttgtcccaacaattggagtacttcaaggagtaccaatctaagctggca 147031 Query: 493 gcgtttgccgggagcagccaggccaagtccatcatcagcggctcgctgtacatcgtcagc 552 || | ||||| |||||||||||| |||| ||||||| |||||| |||||||| ||||| Sbjct: 147032 gccgtggccggaagcagccaggcccagtcaatcatcaacggctcattgtacatcatcagc 147091 Query: 553 ttcggtgcaagtgatttcgtgcagaactactacatcaaccctctgctcttcaagacccag 612 |||||| || |||||||| ||||| ||||||||||| ||| | |||| |||||||||| Sbjct: 147092 gccggtgccagcgatttcgtccagaattactacatcaatcctttcctctacaagacccag 147151 Query: 613 accgtcgaccagttctcggaccgccttgtcagcatcttc 651 |||| |||||||||||| |||||||| ||| |||||||| Sbjct: 147152 accgccgaccagttctccgaccgcctcgtcggcatcttc 147190 Score = 168 bits (85), Expect = 3e-38 Identities = 148/169 (87%) Strand = Plus / Plus Query: 925 ttcacggaggcgaagcggggatgctgcgggacggggaaggtggagttcacggtgttcctc 984 ||||||||||||| | |||||||||||||||| |||| ||||||| |||||| | || Sbjct: 147760 ttcacggaggcgaggaggggatgctgcgggacagggacggtggagacgacggtgcttctg 147819 Query: 985 tgcaaccccaagtcggtggggacgtgctcgaacgcgtcgacctacgtgttctgggacgcc 1044 ||||||||||||||| | || || ||| |||||||| |||| |||||||||||||||||| Sbjct: 147820 tgcaaccccaagtcgatcggcacctgcccgaacgcgacgacgtacgtgttctgggacgcc 147879 Query: 1045 gtccacccgtcggaggcggccaaccaagtgatcgccgacgccctcctcg 1093 |||||||||||||||||||| ||||| ||| |||||||| ||||||||| Sbjct: 147880 gtccacccgtcggaggcggcgaaccaggtgctcgccgactccctcctcg 147928 Score = 93.7 bits (47), Expect = 2e-15 Identities = 143/175 (81%) Strand = Plus / Plus Query: 127 gcgcagccgcttgtgccaggggtcttcacgttcggcgactcgacggtcgacataggcaac 186 ||||||||||| ||||| | ||| | |||||||| ||||| |||| ||| |||| ||| Sbjct: 146352 gcgcagccgctcgtgccggccgtcatgacgttcggtgactcatcggtggacgtaggtaac 146411 Query: 187 aacgactacctccacaccctcatcaaggcggacttccctccctacggcagggacttcccc 246 || ||||||||| | ||| |||||||||| |||||||||||||||| ||||||||| Sbjct: 146412 aatgactacctcaaaaccatcatcaaggcaaacttccctccctacggaagggacttcaag 146471 Query: 247 aatcgcgtggccaccgggaggttttgcaacggcaagctggccaccgacatcactg 301 || | || |||| |||||||| ||||||||||||||||| || || ||||||| Sbjct: 146472 aaccaggtacccacggggaggttctgcaacggcaagctggctactgatatcactg 146526 Score = 63.9 bits (32), Expect = 1e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 337 tatctcagcccgcaggcgtcggggaagaaccttctgatcggtgccaacttcgcgtcggct 396 ||||||||||| | ||||| ||||||||||||||||| || |||||||| || || || Sbjct: 146667 tatctcagcccagatgcgtcagggaagaaccttctgattggagccaactttgcatctgca 146726 Query: 397 ggatccggctactacgatcacacggcgcttatgtat 432 ||||| |||||||| || ||||| || ||| ||||| Sbjct: 146727 ggatctggctactatgaccacactgcacttctgtat 146762
>dbj|AP003632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624B04 Length = 72745 Score = 194 bits (98), Expect = 6e-46 Identities = 206/242 (85%) Strand = Plus / Plus Query: 667 caactttacggcatgggagcgcggcgcatcgcggtgacgacgctgccgcccctgggctgc 726 ||||| ||| |||||||||| |||||||||| |||||| |||||||||| |||||||| Sbjct: 15084 caactgtacagcatgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgc 15143 Query: 727 ctccccgcggcgatcacgctgttcgggcacgggagcaccgggtgcgtgtcgaggctcaac 786 || || |||||||||||||||||||| |||| |||| ||||||||| |||||||||||| Sbjct: 15144 ctaccggcggcgatcacgctgttcggctacggcagcagcgggtgcgtctcgaggctcaac 15203 Query: 787 agcgactcccagaggttcaacgggaagatgagcgccgccgtgagctccctggcgaagcgg 846 |||||| |||||| |||||||| ||||||| || | |||| ||| || ||||| Sbjct: 15204 agcgacgcccagaacttcaacggcaagatgaacgtcaccgtcgactcgctttcgaagacc 15263 Query: 847 taccacgacctcaagatcgccgtattcgacatctacacgcccctctacagcctcgtcacc 906 ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 15264 tactccgacctcaagatcgccgtgttcgacatctacacgcccctctacgacctcgtcacc 15323 Query: 907 tc 908 || Sbjct: 15324 tc 15325 Score = 188 bits (95), Expect = 4e-44 Identities = 188/219 (85%) Strand = Plus / Plus Query: 433 catgccatccctttctcccaacaattggagtacttcagggagtaccagtccaagctgtca 492 ||||| || ||||| |||||||||||||||||||||| ||||||||| || |||||| || Sbjct: 14716 catgctattcctttgtcccaacaattggagtacttcaaggagtaccaatctaagctggca 14775 Query: 493 gcgtttgccgggagcagccaggccaagtccatcatcagcggctcgctgtacatcgtcagc 552 || | ||||| |||||||||||| |||| ||||||| |||||| |||||||| ||||| Sbjct: 14776 gccgtggccggaagcagccaggcccagtcaatcatcaacggctcattgtacatcatcagc 14835 Query: 553 ttcggtgcaagtgatttcgtgcagaactactacatcaaccctctgctcttcaagacccag 612 |||||| || |||||||| ||||| ||||||||||| ||| | |||| |||||||||| Sbjct: 14836 gccggtgccagcgatttcgtccagaattactacatcaatcctttcctctacaagacccag 14895 Query: 613 accgtcgaccagttctcggaccgccttgtcagcatcttc 651 |||| |||||||||||| |||||||| ||| |||||||| Sbjct: 14896 accgccgaccagttctccgaccgcctcgtcggcatcttc 14934 Score = 168 bits (85), Expect = 3e-38 Identities = 148/169 (87%) Strand = Plus / Plus Query: 925 ttcacggaggcgaagcggggatgctgcgggacggggaaggtggagttcacggtgttcctc 984 ||||||||||||| | |||||||||||||||| |||| ||||||| |||||| | || Sbjct: 15504 ttcacggaggcgaggaggggatgctgcgggacagggacggtggagacgacggtgcttctg 15563 Query: 985 tgcaaccccaagtcggtggggacgtgctcgaacgcgtcgacctacgtgttctgggacgcc 1044 ||||||||||||||| | || || ||| |||||||| |||| |||||||||||||||||| Sbjct: 15564 tgcaaccccaagtcgatcggcacctgcccgaacgcgacgacgtacgtgttctgggacgcc 15623 Query: 1045 gtccacccgtcggaggcggccaaccaagtgatcgccgacgccctcctcg 1093 |||||||||||||||||||| ||||| ||| |||||||| ||||||||| Sbjct: 15624 gtccacccgtcggaggcggcgaaccaggtgctcgccgactccctcctcg 15672 Score = 93.7 bits (47), Expect = 2e-15 Identities = 143/175 (81%) Strand = Plus / Plus Query: 127 gcgcagccgcttgtgccaggggtcttcacgttcggcgactcgacggtcgacataggcaac 186 ||||||||||| ||||| | ||| | |||||||| ||||| |||| ||| |||| ||| Sbjct: 14096 gcgcagccgctcgtgccggccgtcatgacgttcggtgactcatcggtggacgtaggtaac 14155 Query: 187 aacgactacctccacaccctcatcaaggcggacttccctccctacggcagggacttcccc 246 || ||||||||| | ||| |||||||||| |||||||||||||||| ||||||||| Sbjct: 14156 aatgactacctcaaaaccatcatcaaggcaaacttccctccctacggaagggacttcaag 14215 Query: 247 aatcgcgtggccaccgggaggttttgcaacggcaagctggccaccgacatcactg 301 || | || |||| |||||||| ||||||||||||||||| || || ||||||| Sbjct: 14216 aaccaggtacccacggggaggttctgcaacggcaagctggctactgatatcactg 14270 Score = 63.9 bits (32), Expect = 1e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 337 tatctcagcccgcaggcgtcggggaagaaccttctgatcggtgccaacttcgcgtcggct 396 ||||||||||| | ||||| ||||||||||||||||| || |||||||| || || || Sbjct: 14411 tatctcagcccagatgcgtcagggaagaaccttctgattggagccaactttgcatctgca 14470 Query: 397 ggatccggctactacgatcacacggcgcttatgtat 432 ||||| |||||||| || ||||| || ||| ||||| Sbjct: 14471 ggatctggctactatgaccacactgcacttctgtat 14506 Score = 50.1 bits (25), Expect = 0.022 Identities = 31/33 (93%) Strand = Plus / Plus Query: 852 cgacctcaagatcgccgtattcgacatctacac 884 |||||||||||||||| | |||||||||||||| Sbjct: 46714 cgacctcaagatcgccatcttcgacatctacac 46746
>gb|AY103951.1| Zea mays PCO106933 mRNA sequence Length = 2052 Score = 137 bits (69), Expect = 1e-28 Identities = 192/233 (82%) Strand = Plus / Plus Query: 406 tactacgatcacacggcgcttatgtatcatgccatccctttctcccaacaattggagtac 465 |||||||| |||||||| ||||||||||| || ||||| | ||||| || |||||||| Sbjct: 1600 tactacgaccacacggcacttatgtatcacgcgatcccgctgtcccagcagctggagtac 1659 Query: 466 ttcagggagtaccagtccaagctgtcagcgtttgccgggagcagccaggccaagtccatc 525 ||||||||||||||| | |||||| | ||| | ||||| | | ||||| |||||| Sbjct: 1660 ttcagggagtaccagacgaagctggcggcggtggccggcgccgggcaggcgcgctccatc 1719 Query: 526 atcagcggctcgctgtacatcgtcagcttcggtgcaagtgatttcgtgcagaactactac 585 |||||||| |||||||||||||||| ||| || || || |||||||||||||||||| Sbjct: 1720 ctcagcggcgcgctgtacatcgtcagtgccggcgccagcgacttcgtgcagaactactac 1779 Query: 586 atcaaccctctgctcttcaagacccagaccgtcgaccagttctcggaccgcct 638 || ||||| ||||| |||||||| ||||| | |||||||||||| |||||||| Sbjct: 1780 ataaacccgctgctgttcaagacgcagacggccgaccagttctccgaccgcct 1832 Score = 121 bits (61), Expect = 7e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 673 tacggcatgggagcgcggcgcatcgcggtgacgacgctgccgcccctgggctgcctcccc 732 ||||||||||| ||||| ||| ||| || ||| |||||||||| ||||||||||| || Sbjct: 1867 tacggcatgggggcgcgccgcgtcggcgtcacgtcgctgccgccgctgggctgcctgccg 1926 Query: 733 gcggcgatcacgctgttcgggcacgggagcaccgggtgcgtgtcgaggctcaacagcgac 792 ||| | |||||||||||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 1927 gcgtccatcacgctgttcgggcacggcgccgccgggtgcgtgtccaggctcaacagcgac 1986 Query: 793 tcccagaggttcaacgggaagatga 817 | ||||| |||||| ||||||||| Sbjct: 1987 gcgcagagcttcaaccggaagatga 2011
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 69.9 bits (35), Expect = 2e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 1027 tacgtgttctgggacgccgtccacccgtcggaggcggccaacc 1069 |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 10069307 tacgtgttctgggacgccttccacccgacggaggcggccaacc 10069265
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 69.9 bits (35), Expect = 2e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 1027 tacgtgttctgggacgccgtccacccgtcggaggcggccaacc 1069 |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 93314 tacgtgttctgggacgccttccacccgacggaggcggccaacc 93356
>emb|AJ578669.1|EGU578669 Elaeis guineensis microsatellite DNA, clone mEgCIR3376 Length = 359 Score = 63.9 bits (32), Expect = 1e-06 Identities = 32/32 (100%) Strand = Plus / Minus Query: 562 agtgatttcgtgcagaactactacatcaaccc 593 |||||||||||||||||||||||||||||||| Sbjct: 81 agtgatttcgtgcagaactactacatcaaccc 50
>emb|CT832167.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA014P23, full insert sequence Length = 1476 Score = 61.9 bits (31), Expect = 6e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 998 cggtggggacgtgctcgaacgcgtcgacctacgtgttctgggacgccgtccacccgtcgg 1057 |||||||||||||| | |||||| || |||||||||||||||| ||||||| ||| Sbjct: 1029 cggtggggacgtgcgccaacgcgacggggtacgtgttctgggacggattccaccccacgg 1088 Query: 1058 aggcggccaaccaagtgatcgccgacgccctcctc 1092 | || |||||| | ||| ||||||||||||||||| Sbjct: 1089 acgccgccaacaaggtgctcgccgacgccctcctc 1123 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 257 ccaccgggaggttttgcaacggcaagctggccaccgac 294 |||| ||| |||| |||||||| ||||||||||||||| Sbjct: 286 ccacagggcggttctgcaacgggaagctggccaccgac 323 Score = 42.1 bits (21), Expect = 5.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 700 gtgacgacgctgccgcccctgggctgcctccccgcggcgatcacgctgttcgg 752 |||||| |||||||||| |||| |||||||| ||| || | ||||||||||| Sbjct: 731 gtgacgtcgctgccgccgatggggtgcctcccggcgtcggtgacgctgttcgg 783
>ref|NM_001057449.1| Oryza sativa (japonica cultivar-group) Os03g0683800 (Os03g0683800) mRNA, complete cds Length = 1506 Score = 61.9 bits (31), Expect = 6e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 998 cggtggggacgtgctcgaacgcgtcgacctacgtgttctgggacgccgtccacccgtcgg 1057 |||||||||||||| | |||||| || |||||||||||||||| ||||||| ||| Sbjct: 1033 cggtggggacgtgcgccaacgcgacggggtacgtgttctgggacggattccaccccacgg 1092 Query: 1058 aggcggccaaccaagtgatcgccgacgccctcctc 1092 | || |||||| | ||| ||||||||||||||||| Sbjct: 1093 acgccgccaacaaggtgctcgccgacgccctcctc 1127 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 257 ccaccgggaggttttgcaacggcaagctggccaccgac 294 |||| ||| |||| |||||||| ||||||||||||||| Sbjct: 286 ccacggggcggttctgcaacgggaagctggccaccgac 323 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 568 ttcgtgcagaactactacatcaaccc 593 |||||||||||||||||| ||||||| Sbjct: 603 ttcgtgcagaactactacgtcaaccc 628 Score = 42.1 bits (21), Expect = 5.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 700 gtgacgacgctgccgcccctgggctgcctccccgcggcgatcacgctgttcgg 752 |||||| |||||||||| |||| |||||||| ||| || | ||||||||||| Sbjct: 735 gtgacgtcgctgccgccgatggggtgcctcccggcgtcggtgacgctgttcgg 787
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 61.9 bits (31), Expect = 6e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 998 cggtggggacgtgctcgaacgcgtcgacctacgtgttctgggacgccgtccacccgtcgg 1057 |||||||||||||| | |||||| || |||||||||||||||| ||||||| ||| Sbjct: 143705 cggtggggacgtgcgccaacgcgacggggtacgtgttctgggacggattccaccccacgg 143764 Query: 1058 aggcggccaaccaagtgatcgccgacgccctcctc 1092 | || |||||| | ||| ||||||||||||||||| Sbjct: 143765 acgccgccaacaaggtgctcgccgacgccctcctc 143799 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 257 ccaccgggaggttttgcaacggcaagctggccaccgac 294 |||| ||| |||| |||||||| ||||||||||||||| Sbjct: 139864 ccacggggcggttctgcaacgggaagctggccaccgac 139901 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 568 ttcgtgcagaactactacatcaaccc 593 |||||||||||||||||| ||||||| Sbjct: 140844 ttcgtgcagaactactacgtcaaccc 140869 Score = 42.1 bits (21), Expect = 5.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 700 gtgacgacgctgccgcccctgggctgcctccccgcggcgatcacgctgttcgg 752 |||||| |||||||||| |||| |||||||| ||| || | ||||||||||| Sbjct: 143139 gtgacgtcgctgccgccgatggggtgcctcccggcgtcggtgacgctgttcgg 143191
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 61.9 bits (31), Expect = 6e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 998 cggtggggacgtgctcgaacgcgtcgacctacgtgttctgggacgccgtccacccgtcgg 1057 |||||||||||||| | |||||| || |||||||||||||||| ||||||| ||| Sbjct: 27056028 cggtggggacgtgcgccaacgcgacggggtacgtgttctgggacggattccaccccacgg 27056087 Query: 1058 aggcggccaaccaagtgatcgccgacgccctcctc 1092 | || |||||| | ||| ||||||||||||||||| Sbjct: 27056088 acgccgccaacaaggtgctcgccgacgccctcctc 27056122 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 257 ccaccgggaggttttgcaacggcaagctggccaccgac 294 |||| ||| |||| |||||||| ||||||||||||||| Sbjct: 27052187 ccacggggcggttctgcaacgggaagctggccaccgac 27052224 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 568 ttcgtgcagaactactacatcaaccc 593 |||||||||||||||||| ||||||| Sbjct: 27053167 ttcgtgcagaactactacgtcaaccc 27053192 Score = 42.1 bits (21), Expect = 5.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 700 gtgacgacgctgccgcccctgggctgcctccccgcggcgatcacgctgttcgg 752 |||||| |||||||||| |||| |||||||| ||| || | ||||||||||| Sbjct: 27055462 gtgacgtcgctgccgccgatggggtgcctcccggcgtcggtgacgctgttcgg 27055514
>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete sequence Length = 111882 Score = 61.9 bits (31), Expect = 6e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 998 cggtggggacgtgctcgaacgcgtcgacctacgtgttctgggacgccgtccacccgtcgg 1057 |||||||||||||| | |||||| || |||||||||||||||| ||||||| ||| Sbjct: 94694 cggtggggacgtgcgccaacgcgacggggtacgtgttctgggacggattccaccccacgg 94635 Query: 1058 aggcggccaaccaagtgatcgccgacgccctcctc 1092 | || |||||| | ||| ||||||||||||||||| Sbjct: 94634 acgccgccaacaaggtgctcgccgacgccctcctc 94600 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 568 ttcgtgcagaactactacatcaaccc 593 |||||||||||||||||| ||||||| Sbjct: 97555 ttcgtgcagaactactacgtcaaccc 97530 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Minus Query: 257 ccaccgggaggttttgcaacggcaagctggccaccgac 294 |||| ||| |||| |||||||| ||||||||||||||| Sbjct: 98535 ccacggggcggttctgcaacgggaagctggccaccgac 98498 Score = 42.1 bits (21), Expect = 5.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 700 gtgacgacgctgccgcccctgggctgcctccccgcggcgatcacgctgttcgg 752 |||||| |||||||||| |||| |||||||| ||| || | ||||||||||| Sbjct: 95260 gtgacgtcgctgccgccgatggggtgcctcccggcgtcggtgacgctgttcgg 95208
>dbj|AK099266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013F22, full insert sequence Length = 1508 Score = 61.9 bits (31), Expect = 6e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 998 cggtggggacgtgctcgaacgcgtcgacctacgtgttctgggacgccgtccacccgtcgg 1057 |||||||||||||| | |||||| || |||||||||||||||| ||||||| ||| Sbjct: 1035 cggtggggacgtgcgccaacgcgacggggtacgtgttctgggacggattccaccccacgg 1094 Query: 1058 aggcggccaaccaagtgatcgccgacgccctcctc 1092 | || |||||| | ||| ||||||||||||||||| Sbjct: 1095 acgccgccaacaaggtgctcgccgacgccctcctc 1129 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 257 ccaccgggaggttttgcaacggcaagctggccaccgac 294 |||| ||| |||| |||||||| ||||||||||||||| Sbjct: 288 ccacggggcggttctgcaacgggaagctggccaccgac 325 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 568 ttcgtgcagaactactacatcaaccc 593 |||||||||||||||||| ||||||| Sbjct: 605 ttcgtgcagaactactacgtcaaccc 630 Score = 42.1 bits (21), Expect = 5.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 700 gtgacgacgctgccgcccctgggctgcctccccgcggcgatcacgctgttcgg 752 |||||| |||||||||| |||| |||||||| ||| || | ||||||||||| Sbjct: 737 gtgacgtcgctgccgccgatggggtgcctcccggcgtcggtgacgctgttcgg 789
>dbj|AK060516.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-A02, full insert sequence Length = 1482 Score = 61.9 bits (31), Expect = 6e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 998 cggtggggacgtgctcgaacgcgtcgacctacgtgttctgggacgccgtccacccgtcgg 1057 |||||||||||||| | |||||| || |||||||||||||||| ||||||| ||| Sbjct: 1034 cggtggggacgtgcgccaacgcgacggggtacgtgttctgggacggattccaccccacgg 1093 Query: 1058 aggcggccaaccaagtgatcgccgacgccctcctc 1092 | || |||||| | ||| ||||||||||||||||| Sbjct: 1094 acgccgccaacaaggtgctcgccgacgccctcctc 1128 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 257 ccaccgggaggttttgcaacggcaagctggccaccgac 294 |||| ||| |||| |||||||| ||||||||||||||| Sbjct: 287 ccacggggcggttctgcaacgggaagctggccaccgac 324 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 568 ttcgtgcagaactactacatcaaccc 593 |||||||||||||||||| ||||||| Sbjct: 604 ttcgtgcagaactactacgtcaaccc 629 Score = 42.1 bits (21), Expect = 5.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 700 gtgacgacgctgccgcccctgggctgcctccccgcggcgatcacgctgttcgg 752 |||||| |||||||||| |||| |||||||| ||| || | ||||||||||| Sbjct: 736 gtgacgtcgctgccgccgatggggtgcctcccggcgtcggtgacgctgttcgg 788
>ref|NM_001050662.1| Oryza sativa (japonica cultivar-group) Os01g0728100 (Os01g0728100) mRNA, partial cds Length = 2148 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1033 ttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||| ||||||||||||||||||||||| Sbjct: 1613 ttctgggacgcgttccacccgtcggaggcggccaac 1648
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1033 ttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||| ||||||||||||||||||||||| Sbjct: 30356824 ttctgggacgcgttccacccgtcggaggcggccaac 30356859
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1033 ttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||| ||||||||||||||||||||||| Sbjct: 145143 ttctgggacgcgttccacccgtcggaggcggccaac 145178
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1033 ttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||| ||||||||||||||||||||||| Sbjct: 42551 ttctgggacgcgttccacccgtcggaggcggccaac 42586
>dbj|AK104682.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A06, full insert sequence Length = 714 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1033 ttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||| ||||||||||||||||||||||| Sbjct: 187 ttctgggacgcgttccacccgtcggaggcggccaac 222
>dbj|AK070946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074K21, full insert sequence Length = 2149 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1033 ttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||| ||||||||||||||||||||||| Sbjct: 1614 ttctgggacgcgttccacccgtcggaggcggccaac 1649
>ref|NM_001067370.1| Oryza sativa (japonica cultivar-group) Os08g0112900 (Os08g0112900) mRNA, complete cds Length = 1449 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 1026 ctacgtgttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||||||||||| |||||||| ||| ||||| |||| Sbjct: 1038 ctacgtgttctgggacgccttccacccgacggcggcggtcaac 1080
>ref|NM_001052675.1| Oryza sativa (japonica cultivar-group) Os02g0189200 (Os02g0189200) mRNA, partial cds Length = 1426 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgacataggcaacaacgactacctc 198 |||||||||||| |||||||||| ||||||||| |||||||| Sbjct: 136 gttcggcgactccacggtcgacacgggcaacaacaactacctc 178
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 1026 ctacgtgttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||||||||||| |||||||| ||| ||||| |||| Sbjct: 687105 ctacgtgttctgggacgccttccacccgacggcggcggtcaac 687147
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgacataggcaacaacgactacctc 198 |||||||||||| |||||||||| ||||||||| |||||||| Sbjct: 4942894 gttcggcgactccacggtcgacacgggcaacaacaactacctc 4942936 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Minus Query: 147 ggtcttcacgttcggcgactcgacggtcgacataggcaacaacgactacct 197 ||||||| |||||||||||||||||| ||| | ||||||||| ||||||| Sbjct: 27176391 ggtcttcgtgttcggcgactcgacggttgacgtgggcaacaacaactacct 27176341 Score = 46.1 bits (23), Expect = 0.34 Identities = 32/35 (91%) Strand = Plus / Plus Query: 200 acaccctcatcaaggcggacttccctccctacggc 234 ||||| |||||||||| ||||||||||||||||| Sbjct: 78386 acaccatcatcaaggccaacttccctccctacggc 78420 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgac 177 |||||||||||||||||||||| Sbjct: 1046363 gttcggcgactcgacggtcgac 1046384 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1027 tacgtgttctgggacgccgtccaccc 1052 |||||||||||||||||||| ||||| Sbjct: 15423821 tacgtgttctgggacgccgtgcaccc 15423846
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgacataggcaacaacgactacctc 198 |||||||||||| |||||||||| ||||||||| |||||||| Sbjct: 14020 gttcggcgactccacggtcgacacgggcaacaacaactacctc 14062
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Minus Query: 147 ggtcttcacgttcggcgactcgacggtcgacataggcaacaacgactacct 197 ||||||| |||||||||||||||||| ||| | ||||||||| ||||||| Sbjct: 72840 ggtcttcgtgttcggcgactcgacggttgacgtgggcaacaacaactacct 72790
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgacataggcaacaacgactacctc 198 |||||||||||| |||||||||| ||||||||| |||||||| Sbjct: 87633 gttcggcgactccacggtcgacacgggcaacaacaactacctc 87675
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Minus Query: 147 ggtcttcacgttcggcgactcgacggtcgacataggcaacaacgactacct 197 ||||||| |||||||||||||||||| ||| | ||||||||| ||||||| Sbjct: 27062 ggtcttcgtgttcggcgactcgacggttgacgtgggcaacaacaactacct 27012
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 1026 ctacgtgttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||||||||||| |||||||| ||| ||||| |||| Sbjct: 114483 ctacgtgttctgggacgccttccacccgacggcggcggtcaac 114525
>dbj|AK108567.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C12, full insert sequence Length = 1426 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgacataggcaacaacgactacctc 198 |||||||||||| |||||||||| ||||||||| |||||||| Sbjct: 136 gttcggcgactccacggtcgacacgggcaacaacaactacctc 178
>dbj|AK105876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B10, full insert sequence Length = 1449 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 1026 ctacgtgttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||||||||||| |||||||| ||| ||||| |||| Sbjct: 1038 ctacgtgttctgggacgccttccacccgacggcggcggtcaac 1080
>dbj|AK069672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A20, full insert sequence Length = 1327 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 1026 ctacgtgttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||||||||||| |||||||| ||| ||||| |||| Sbjct: 1046 ctacgtgttctgggacgccttccacccgacggcggcggtcaac 1088
>ref|NM_001063350.1| Oryza sativa (japonica cultivar-group) Os06g0149100 (Os06g0149100) mRNA, complete cds Length = 1589 Score = 50.1 bits (25), Expect = 0.022 Identities = 31/33 (93%) Strand = Plus / Plus Query: 852 cgacctcaagatcgccgtattcgacatctacac 884 |||||||||||||||| | |||||||||||||| Sbjct: 958 cgacctcaagatcgccatcttcgacatctacac 990
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 50.1 bits (25), Expect = 0.022 Identities = 31/33 (93%) Strand = Plus / Plus Query: 852 cgacctcaagatcgccgtattcgacatctacac 884 |||||||||||||||| | |||||||||||||| Sbjct: 2853 cgacctcaagatcgccatcttcgacatctacac 2885
>dbj|AK099064.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157L13, full insert sequence Length = 1590 Score = 50.1 bits (25), Expect = 0.022 Identities = 31/33 (93%) Strand = Plus / Plus Query: 852 cgacctcaagatcgccgtattcgacatctacac 884 |||||||||||||||| | |||||||||||||| Sbjct: 959 cgacctcaagatcgccatcttcgacatctacac 991
>dbj|AK067418.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102M08, full insert sequence Length = 1590 Score = 50.1 bits (25), Expect = 0.022 Identities = 31/33 (93%) Strand = Plus / Plus Query: 852 cgacctcaagatcgccgtattcgacatctacac 884 |||||||||||||||| | |||||||||||||| Sbjct: 959 cgacctcaagatcgccatcttcgacatctacac 991
>ref|NM_001062592.1| Oryza sativa (japonica cultivar-group) Os05g0518300 (Os05g0518300) mRNA, complete cds Length = 1315 Score = 48.1 bits (24), Expect = 0.086 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1033 ttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||| |||||||| |||||||||||||| Sbjct: 1043 ttctgggacgcgttccacccgacggaggcggccaac 1078
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 48.1 bits (24), Expect = 0.086 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1033 ttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||| |||||||| |||||||||||||| Sbjct: 123276 ttctgggacgcgttccacccgacggaggcggccaac 123241
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 48.1 bits (24), Expect = 0.086 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1033 ttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||| |||||||| |||||||||||||| Sbjct: 25482915 ttctgggacgcgttccacccgacggaggcggccaac 25482880
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 48.1 bits (24), Expect = 0.086 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1090 ctcgtcaccggcatcgacctcgtc 1113 |||||||||||||||||||||||| Sbjct: 5816123 ctcgtcaccggcatcgacctcgtc 5816100
>dbj|AK061147.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D08, full insert sequence Length = 1315 Score = 48.1 bits (24), Expect = 0.086 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1033 ttctgggacgccgtccacccgtcggaggcggccaac 1068 ||||||||||| |||||||| |||||||||||||| Sbjct: 1043 ttctgggacgcgttccacccgacggaggcggccaac 1078
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 46.1 bits (23), Expect = 0.34 Identities = 32/35 (91%) Strand = Plus / Plus Query: 200 acaccctcatcaaggcggacttccctccctacggc 234 ||||| |||||||||| ||||||||||||||||| Sbjct: 72995 acaccatcatcaaggccaacttccctccctacggc 73029
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 46.1 bits (23), Expect = 0.34 Identities = 32/35 (91%) Strand = Plus / Plus Query: 200 acaccctcatcaaggcggacttccctccctacggc 234 ||||| |||||||||| ||||||||||||||||| Sbjct: 27413 acaccatcatcaaggccaacttccctccctacggc 27447
>ref|XM_001172980.1| PREDICTED: Pan troglodytes homeobox B6, transcript variant 3 (HOXB6), mRNA Length = 4241 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 2735 gacggggaaggtggagttcacg 2714
>ref|XM_001172971.1| PREDICTED: Pan troglodytes homeobox B6, transcript variant 2 (HOXB6), mRNA Length = 2171 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 665 gacggggaaggtggagttcacg 644
>ref|XM_001172963.1| PREDICTED: Pan troglodytes homeobox B6, transcript variant 1 (HOXB6), mRNA Length = 1871 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 365 gacggggaaggtggagttcacg 344
>gb|DQ890732.1| Synthetic construct Homo sapiens clone FLH165539.01X; RZPDo839D08160D HOXB6 mRNA, complete sequence Length = 675 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 36 gacggggaaggtggagttcacg 15
>gb|CP000434.1| Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence Length = 332361 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1082 acgccctcctcgtcaccggcatcgacctcg 1111 ||||| || ||||||||||||||||||||| Sbjct: 94309 acgccgtcgtcgtcaccggcatcgacctcg 94338
>ref|XM_001081290.1| PREDICTED: Rattus norvegicus similar to homeotic protein Hox 2.2 - mouse (predicted) (RGD1562142_predicted), mRNA Length = 1957 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 678 gacggggaaggtggagttcacg 657
>ref|XM_573182.2| PREDICTED: Rattus norvegicus similar to homeotic protein Hox 2.2 - mouse (predicted) (RGD1562142_predicted), mRNA Length = 1957 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 678 gacggggaaggtggagttcacg 657
>ref|XM_001088485.1| PREDICTED: Macaca mulatta similar to homeobox B6, transcript variant 3 (LOC696850), mRNA Length = 3992 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 2736 gacggggaaggtggagttcacg 2715
>ref|XM_001088369.1| PREDICTED: Macaca mulatta similar to homeobox B6, transcript variant 2 (LOC696850), mRNA Length = 1920 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 664 gacggggaaggtggagttcacg 643
>ref|XM_001088274.1| PREDICTED: Macaca mulatta similar to homeobox B6, transcript variant 1 (LOC696850), mRNA Length = 1618 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 362 gacggggaaggtggagttcacg 341
>gb|AC151980.3| Mus musculus BAC clone RP24-83M3 from chromosome 8, complete sequence Length = 253457 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1320 cttttcttttttctttcatgta 1341 |||||||||||||||||||||| Sbjct: 226545 cttttcttttttctttcatgta 226524
>gb|AF287967.1| Homo sapiens homeobox B7 (HOXB7) gene, partial cds; and homeobox B6 (HOXB6), homeobox B5 (HOXB5), homeobox B4 (HOXB4), and homeobox B3 (HOXB3) genes, complete cds Length = 59339 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 9805 gacggggaaggtggagttcacg 9784
>ref|XM_882402.1| PREDICTED: Bos taurus similar to Homeobox protein Hox-B6 (Hox-2.2) (MH-22A), transcript variant 3 (LOC539095), mRNA Length = 1317 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 639 gacggggaaggtggagttcacg 618
>ref|XM_882392.1| PREDICTED: Bos taurus similar to Homeobox protein Hox-B6 (Hox-2.2) (MH-22A), transcript variant 2 (LOC539095), mRNA Length = 2537 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 1859 gacggggaaggtggagttcacg 1838
>ref|NM_008269.1| Mus musculus homeo box B6 (Hoxb6), mRNA gb|BC016893.1| Mus musculus homeo box B6, mRNA (cDNA clone MGC:18719 IMAGE:4223365), complete cds Length = 1344 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 42 gacggggaaggtggagttcacg 21
>gb|AC103702.3| Homo sapiens chromosome 17, clone RP11-357H14, complete sequence Length = 187386 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 91384 gacggggaaggtggagttcacg 91363
>gb|AC116664.1| Papio hamadryas, clone RP41-57E23, complete sequence Length = 175388 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 120861 gacggggaaggtggagttcacg 120840
>dbj|AK011622.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610029N04 product:HOMEOBOX PROTEIN HOX-B6 (HOX-2.2) (MH-22A) homolog [Mus musculus], full insert sequence Length = 1417 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 142 gacggggaaggtggagttcacg 121
>emb|X58431.1|HSHOX22 Human Hox2.2 gene for a homeobox protein Length = 2786 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 351 gacggggaaggtggagttcacg 330
>emb|AJ270993.1|HSA270993 Homo sapiens mRNA for homeobox protein (Hox-2.2 gene) Length = 3324 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 1016 gacggggaaggtggagttcacg 995
>gb|AC011194.15|AC011194 Mus musculus chromosome 11, clone RP23-196F5, complete sequence Length = 181320 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 94994 gacggggaaggtggagttcacg 94973
>gb|AC009789.21|AC009789 Homo sapiens chromosome 17, clone RP11-361K8, complete sequence Length = 168215 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 95251 gacggggaaggtggagttcacg 95230
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgac 177 |||||||||||||||||||||| Sbjct: 35071 gttcggcgactcgacggtcgac 35092
>gb|AC129959.6| Bos taurus, clone RP42-518P7, complete sequence Length = 211988 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 116339 gacggggaaggtggagttcacg 116360
>dbj|AP005650.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078K05 Length = 162901 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1027 tacgtgttctgggacgccgtccaccc 1052 |||||||||||||||||||| ||||| Sbjct: 94603 tacgtgttctgggacgccgtgcaccc 94628
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1217_F02 Length = 118822 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgac 177 |||||||||||||||||||||| Sbjct: 117782 gttcggcgactcgacggtcgac 117803
>ref|NM_018952.4| Homo sapiens homeobox B6 (HOXB6), mRNA Length = 1686 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 361 gacggggaaggtggagttcacg 340
>gb|AY892922.1| Synthetic construct Homo sapiens clone FLH135117.01L homeobox B6 (HOXB6) mRNA, partial cds Length = 675 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 36 gacggggaaggtggagttcacg 15
>gb|AY890464.1| Synthetic construct Homo sapiens clone FLH135121.01X homeobox B6 (HOXB6) mRNA, complete cds Length = 675 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 36 gacggggaaggtggagttcacg 15
>emb|AJ341581.1|HSA341581 Homo sapiens genomic sequence surrounding NotI site, clone NL6-EM19R Length = 575 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 61 gacggggaaggtggagttcacg 40
>emb|AJ342021.1|HSA342021 Homo sapiens genomic sequence surrounding NotI site, clone NL6-IF10R Length = 401 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 61 gacggggaaggtggagttcacg 40
>emb|AJ325379.1|HSA325379 Homo sapiens genomic sequence surrounding NotI site, clone NB6-633R Length = 853 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 61 gacggggaaggtggagttcacg 40
>emb|AJ325378.1|HSA325378 Homo sapiens genomic sequence surrounding NotI site, clone NB6-632R Length = 911 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 61 gacggggaaggtggagttcacg 40
>emb|AJ331378.1|HSA331378 Homo sapiens genomic sequence surrounding NotI site, clone NL6-AE9RS Length = 816 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 61 gacggggaaggtggagttcacg 40
>gb|BC014651.1| Homo sapiens homeobox B6, mRNA (cDNA clone MGC:20183 IMAGE:4548382), complete cds Length = 1681 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 361 gacggggaaggtggagttcacg 340
>emb|X56459.1|MMHOX22A1 Murine HOX 2.2 mRNA for a homeobox protein Length = 637 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 258 gacggggaaggtggagttcacg 237
>gb|AC151998.6| Mus musculus BAC clone RP23-98L16 from chromosome 8, complete sequence Length = 219376 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1320 cttttcttttttctttcatgta 1341 |||||||||||||||||||||| Sbjct: 199914 cttttcttttttctttcatgta 199935
>gb|AF012098.1|AF012098 Felis catus homeobox B2 (HOXB2) gene, partial cds Length = 208 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 28 gacggggaaggtggagttcacg 7
>gb|AC158526.3| Mus musculus BAC clone RP23-288A9 from chromosome 12, complete sequence Length = 236362 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1314 ctggatcttttcttttttcttt 1335 |||||||||||||||||||||| Sbjct: 53503 ctggatcttttcttttttcttt 53524
>gb|AC119202.6| Mus musculus chromosome 8, clone RP24-185N3, complete sequence Length = 159765 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1310 ggcactggatcttttcttttttcttt 1335 |||||||| ||||||||||||||||| Sbjct: 82594 ggcactgggtcttttcttttttcttt 82569
>gb|J03782.1|MUSHOX22 Mouse homeobox (Hox-2.2) containing protein gene, complete cds Length = 1452 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 145 gacggggaaggtggagttcacg 124
>emb|AL645478.15| Mouse DNA sequence from clone RP23-85A17 on chromosome 11, complete sequence Length = 121560 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcacg 975 |||||||||||||||||||||| Sbjct: 113812 gacggggaaggtggagttcacg 113791
>emb|CT831403.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA020J01, full insert sequence Length = 1369 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1025 cctacgtgttctgggacgccgtccacccgtcggaggcggccaacc 1069 |||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 1012 cctacgtgttctgggacgcctaccaccccacggagaaggccaacc 1056
>ref|NM_001071321.1| Oryza sativa (japonica cultivar-group) Os10g0463200 (Os10g0463200) mRNA, complete cds Length = 1374 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1025 cctacgtgttctgggacgccgtccacccgtcggaggcggccaacc 1069 |||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 1005 cctacgtgttctgggacgcctaccaccccacggagaaggccaacc 1049
>ref|NM_001070676.1| Oryza sativa (japonica cultivar-group) Os10g0140300 (Os10g0140300) mRNA, complete cds Length = 1299 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 155 cgttcggcgactcgacggtcgacataggcaacaacgactacctcc 199 ||||||||||||||| || |||| ||||||||| ||||||||| Sbjct: 156 cgttcggcgactcgatcgtggacacgggcaacaacaactacctcc 200 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 218 acttccctccctacggcagggacttcccc 246 ||||||||||||||||| | ||||||||| Sbjct: 219 acttccctccctacggccgagacttcccc 247
>ref|NM_001069161.1| Oryza sativa (japonica cultivar-group) Os09g0132200 (Os09g0132200) mRNA, complete cds Length = 1248 Score = 42.1 bits (21), Expect = 5.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgacataggcaacaacgactacctccacacc 204 |||||| ||||||||||||||| ||||||||| ||||| ||| |||| Sbjct: 126 gttcggggactcgacggtcgacgccggcaacaacaactacatcctcacc 174
>gb|BC078462.1| Xenopus laevis MGC85215 protein, mRNA (cDNA clone MGC:85215 IMAGE:6871681), complete cds Length = 972 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 810 gaagatgagcgccgccgtgag 830 ||||||||||||||||||||| Sbjct: 94 gaagatgagcgccgccgtgag 74
>gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, complete sequence Length = 180370 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 ctgtcagcgtttgccgggagc 507 ||||||||||||||||||||| Sbjct: 7246 ctgtcagcgtttgccgggagc 7266
>gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, complete sequence Length = 170409 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 ctgtcagcgtttgccgggagc 507 ||||||||||||||||||||| Sbjct: 25363 ctgtcagcgtttgccgggagc 25343
>ref|XM_859617.1| PREDICTED: Canis familiaris similar to Homeobox protein Hox-B6 (Hox-2.2) (MH-22A), transcript variant 4 (LOC491056), mRNA Length = 1314 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcac 974 ||||||||||||||||||||| Sbjct: 571 gacggggaaggtggagttcac 551
>ref|XM_859599.1| PREDICTED: Canis familiaris similar to Homeobox protein Hox-B6 (Hox-2.2) (MH-22A), transcript variant 3 (LOC491056), mRNA Length = 1251 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcac 974 ||||||||||||||||||||| Sbjct: 508 gacggggaaggtggagttcac 488
>ref|XM_859579.1| PREDICTED: Canis familiaris similar to Homeobox protein Hox-B6 (Hox-2.2) (MH-22A), transcript variant 2 (LOC491056), mRNA Length = 1885 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 954 gacggggaaggtggagttcac 974 ||||||||||||||||||||| Sbjct: 571 gacggggaaggtggagttcac 551
>gb|AC124041.3| Oryctolagus cuniculus clone LB1-44O5, complete sequence Length = 106159 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1316 ggatcttttcttttttctttc 1336 ||||||||||||||||||||| Sbjct: 41627 ggatcttttcttttttctttc 41647
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1094 tcaccggcatcgacctcgtca 1114 ||||||||||||||||||||| Sbjct: 1186350 tcaccggcatcgacctcgtca 1186370
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 734 cggcgatcacgctgttcgggc 754 ||||||||||||||||||||| Sbjct: 225112 cggcgatcacgctgttcgggc 225132
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 1025 cctacgtgttctgggacgccgtccacccgtcggaggcggccaacc 1069 |||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 102322 cctacgtgttctgggacgcctaccaccccacggagaaggccaacc 102278
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 816 gagcgccgccgtgagctccct 836 ||||||||||||||||||||| Sbjct: 138704 gagcgccgccgtgagctccct 138724
>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence Length = 122319 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 155 cgttcggcgactcgacggtcgacataggcaacaacgactacctcc 199 ||||||||||||||| || |||| ||||||||| ||||||||| Sbjct: 36951 cgttcggcgactcgatcgtggacacgggcaacaacaactacctcc 36995 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 218 acttccctccctacggcagggacttcccc 246 ||||||||||||||||| | ||||||||| Sbjct: 37014 acttccctccctacggccgagacttcccc 37042
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 155 cgttcggcgactcgacggtcgacataggcaacaacgactacctcc 199 ||||||||||||||| || |||| ||||||||| ||||||||| Sbjct: 2471752 cgttcggcgactcgatcgtggacacgggcaacaacaactacctcc 2471796 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 218 acttccctccctacggcagggacttcccc 246 ||||||||||||||||| | ||||||||| Sbjct: 2471815 acttccctccctacggccgagacttcccc 2471843 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1025 cctacgtgttctgggacgccgtccacccgtcggaggcggccaacc 1069 |||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 16557920 cctacgtgttctgggacgcctaccaccccacggagaaggccaacc 16557964
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 5.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgacataggcaacaacgactacctccacacc 204 |||||| ||||||||||||||| ||||||||| ||||| ||| |||| Sbjct: 2405757 gttcggggactcgacggtcgacgccggcaacaacaactacatcctcacc 2405805
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 155 cgttcggcgactcgacggtcgacataggcaacaacgactacctcc 199 ||||||||||||||| || |||| ||||||||| ||||||||| Sbjct: 128484 cgttcggcgactcgatcgtggacacgggcaacaacaactacctcc 128528 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 218 acttccctccctacggcagggacttcccc 246 ||||||||||||||||| | ||||||||| Sbjct: 128547 acttccctccctacggccgagacttcccc 128575
>emb|Z82208.1|HS426N21 Human DNA sequence from clone RP3-426N21 on chromosome X Contains part of a novel gene (FLJ11362), complete sequence Length = 44826 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 432 tcatgccatccctttctccca 452 ||||||||||||||||||||| Sbjct: 40899 tcatgccatccctttctccca 40879
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 5.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 680 tgggagcgcggcgcatcgcggtgacgacgctgc 712 |||||| ||||||| |||||| ||||||||||| Sbjct: 2196665 tgggagtgcggcgcgtcgcggagacgacgctgc 2196633
>emb|BX470148.15| Zebrafish DNA sequence from clone CH211-198A16 in linkage group 20, complete sequence Length = 64300 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1311 gcactggatcttttctttttt 1331 ||||||||||||||||||||| Sbjct: 56419 gcactggatcttttctttttt 56399
>gb|AC005798.10|AC005798 Homo sapiens chromosome 4 clone RP11-442P12, complete sequence Length = 206631 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1129 cctgaagggaaaataatgtgt 1149 ||||||||||||||||||||| Sbjct: 141375 cctgaagggaaaataatgtgt 141395
>gb|AC012496.10| Homo sapiens BAC clone RP11-341N18 from 2, complete sequence Length = 122770 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1315 tggatcttttcttttttcttt 1335 ||||||||||||||||||||| Sbjct: 22504 tggatcttttcttttttcttt 22524
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0095O23 Length = 159792 Score = 42.1 bits (21), Expect = 5.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgacataggcaacaacgactacctccacacc 204 |||||| ||||||||||||||| ||||||||| ||||| ||| |||| Sbjct: 84167 gttcggggactcgacggtcgacgccggcaacaacaactacatcctcacc 84215
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 693 catcgcggtgacgacgctgccgccc 717 |||||||||||||||||||| |||| Sbjct: 4480820 catcgcggtgacgacgctgctgccc 4480844
>dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C12, full insert sequence Length = 1375 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1025 cctacgtgttctgggacgccgtccacccgtcggaggcggccaacc 1069 |||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 1006 cctacgtgttctgggacgcctaccaccccacggagaaggccaacc 1050
>dbj|AK100609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107L07, full insert sequence Length = 1299 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 155 cgttcggcgactcgacggtcgacataggcaacaacgactacctcc 199 ||||||||||||||| || |||| ||||||||| ||||||||| Sbjct: 156 cgttcggcgactcgatcgtggacacgggcaacaacaactacctcc 200 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 218 acttccctccctacggcagggacttcccc 246 ||||||||||||||||| | ||||||||| Sbjct: 219 acttccctccctacggccgagacttcccc 247
>dbj|AK061026.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F09, full insert sequence Length = 1248 Score = 42.1 bits (21), Expect = 5.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgacataggcaacaacgactacctccacacc 204 |||||| ||||||||||||||| ||||||||| ||||| ||| |||| Sbjct: 126 gttcggggactcgacggtcgacgccggcaacaacaactacatcctcacc 174
>dbj|AK060124.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-H03, full insert sequence Length = 1077 Score = 42.1 bits (21), Expect = 5.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 156 gttcggcgactcgacggtcgacataggcaacaacgactacctccacacc 204 |||||| ||||||||||||||| ||||||||| ||||| ||| |||| Sbjct: 126 gttcggggactcgacggtcgacgccggcaacaacaactacatcctcacc 174
>gb|AC140001.8| Mus musculus chromosome 5, clone RP24-276E6, complete sequence Length = 130466 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 ctgtcagcgtttgccgggagc 507 ||||||||||||||||||||| Sbjct: 23777 ctgtcagcgtttgccgggagc 23757
>emb|BX005405.11| Zebrafish DNA sequence from clone DKEY-19I22 in linkage group 20, complete sequence Length = 62329 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1311 gcactggatcttttctttttt 1331 ||||||||||||||||||||| Sbjct: 7882 gcactggatcttttctttttt 7902
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1002 ggggacgtgctcgaacgcgtc 1022 ||||||||||||||||||||| Sbjct: 443830 ggggacgtgctcgaacgcgtc 443850
>ref|NM_001008066.1| Xenopus tropicalis cornichon homolog (Drosophila) (cnih), mRNA gb|BC080958.1| Xenopus tropicalis cornichon homolog (Drosophila), mRNA (cDNA clone MGC:79689 IMAGE:6980814), complete cds Length = 1626 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 810 gaagatgagcgccgccgtgag 830 ||||||||||||||||||||| Sbjct: 128 gaagatgagcgccgccgtgag 108
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 gcttgtgccaggggtcttcac 155 ||||||||||||||||||||| Sbjct: 113031 gcttgtgccaggggtcttcac 113011
>emb|CR762086.2| Xenopus tropicalis finished cDNA, clone TEgg138f23 Length = 963 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 810 gaagatgagcgccgccgtgag 830 ||||||||||||||||||||| Sbjct: 73 gaagatgagcgccgccgtgag 53
>emb|AL772393.11| Mouse DNA sequence from clone RP23-398D18 on chromosome 4, complete sequence Length = 207495 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1322 tttcttttttctttcatgtac 1342 ||||||||||||||||||||| Sbjct: 133037 tttcttttttctttcatgtac 133057
>emb|AL669900.15| Mouse DNA sequence from clone RP23-254J17 on chromosome X, complete sequence Length = 207870 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1315 tggatcttttcttttttcttt 1335 ||||||||||||||||||||| Sbjct: 135619 tggatcttttcttttttcttt 135599 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 204,016,923 Number of extensions: 11427628 Number of successful extensions: 311645 Number of sequences better than 10.0: 129 Number of HSP's gapped: 311634 Number of HSP's successfully gapped: 202 Length of query: 1397 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1374 Effective length of database: 18,503,978,556 Effective search space: 25424466535944 Effective search space used: 25424466535944 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)