Clone Name | FLbaf87o20 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK065720:Os03g0439700 | 403 | e-112 | 2 | AK073867:Os05g0539900 | 92 | 5e-19 | 3 | AK102510:Os09g0322000 | 31 | 1.4 | 4 | AK067346:Os09g0322000 | 31 | 1.4 | 5 | AK063975:Os09g0322000 | 31 | 1.4 | 6 | AK107047:Os02g0265100 | 29 | 5.3 | 7 | AK066045:Os07g0476900 | 29 | 6.9 | 8 | AY271618:Os01g0609300 | 28 | 9.0 | 9 | AK100135:Os01g0609300 | 28 | 9.0 |
---|
>AK065720:Os03g0439700 | Length = 312 Score = 403 bits (1036), Expect = e-112 Identities = 219/316 (69%), Positives = 230/316 (72%) Frame = +1 Query: 46 MLLRLKITTVQPVALLLGHDHGGTASPRQFAGAFPQGGRASTRTKRLRGVAVAMALKEEE 225 MLLRLK V P ALL G A Q G + R V V MALKEE Sbjct: 1 MLLRLKAVAVHPAALL-GRPRSHDAP--QLVGRTGASTTTARRRAARSAVTVTMALKEE- 56 Query: 226 PESSRSRFAGGGLSWDPRMEIGVPYEQRPVNEYSALKESTLYSWAELSPGSFFMRLGSLC 405 PE SRS FAGG SWDP +EI VP+EQRPVNEYSALK+S LYSWAELSPGSFF+RLGSL Sbjct: 57 PEGSRSGFAGGVPSWDPGLEIQVPFEQRPVNEYSALKDSVLYSWAELSPGSFFLRLGSLW 116 Query: 406 LVTFTVLAAPISAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWSYVGDRLLSAVV 585 L+TFTVLAAPI+AASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWSYVGDRLLSAVV Sbjct: 117 LITFTVLAAPIAAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWSYVGDRLLSAVV 176 Query: 586 PYEETGWYDGQMWVKPAEVLARDRLLGSYKVKPVINLLKQXXXXXXXXXXXXXXXXXXXX 765 PYEETGWYDGQMWVKP EVLARDRLLGSYKVKPVINLLKQ Sbjct: 177 PYEETGWYDGQMWVKPPEVLARDRLLGSYKVKPVINLLKQTLVGTGALLVGAVSLFAFAA 236 Query: 766 XXXXXXHSFNGAPSTASSKPIMRREELLKLPAEVRQDDDLXXXXXXXXNGRPVYCRDRYY 945 HS N PS ASSKP +RREELL+LP EVRQDDDL +GRPVYCRDRYY Sbjct: 237 PVEDFLHSVNAPPSAASSKPSLRREELLRLPVEVRQDDDLAAAAAEAADGRPVYCRDRYY 296 Query: 946 RALAGGQYCTSDDLLD 993 RALAGGQYC DDLL+ Sbjct: 297 RALAGGQYCKWDDLLN 312
>AK073867:Os05g0539900 | Length = 176 Score = 92.4 bits (228), Expect = 5e-19 Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 2/131 (1%) Frame = +1 Query: 235 SRSRFAGGGLSWDPRMEIGVPYEQRPVNEYSALKESTLYSWA--ELSPGSFFMRLGSLCL 408 SR+ + G W P VP EQ PVNEY +L S +SWA +L+ + L Sbjct: 47 SRNGSSSQGTEWCP-----VPPEQLPVNEYESLAASLPFSWAAGDLTVYCSRLALTGAAF 101 Query: 409 VTFTVLAAPISAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWSYVGDRLLSAVVP 588 F L G D + L A +L V+L V+R+YLGW+YVG+RLLSA V Sbjct: 102 ALFVGLPVASFGGRGGAGGDAVHLALGATGSGILAVTLAVVRMYLGWAYVGNRLLSATVE 161 Query: 589 YEETGWYDGQM 621 YEETGWYDGQ+ Sbjct: 162 YEETGWYDGQV 172
>AK102510:Os09g0322000 | Length = 350 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/50 (30%), Positives = 30/50 (60%) Frame = +1 Query: 406 LVTFTVLAAPISAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWSY 555 +++ V+ A I A F G++ L+ G+GT+L+V++ + + GWS+ Sbjct: 183 MISSMVVVAVILALKFGHGEE-----LSKGVGTVLVVAICLFVVAYGWSW 227
>AK067346:Os09g0322000 | Length = 530 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/50 (30%), Positives = 30/50 (60%) Frame = +1 Query: 406 LVTFTVLAAPISAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWSY 555 +++ V+ A I A F G++ L+ G+GT+L+V++ + + GWS+ Sbjct: 363 MISSMVVVAVILALKFGHGEE-----LSKGVGTVLVVAICLFVVAYGWSW 407
>AK063975:Os09g0322000 | Length = 412 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/50 (30%), Positives = 30/50 (60%) Frame = +1 Query: 406 LVTFTVLAAPISAASFSPGKDPLKFVLAAGIGTLLLVSLVVLRIYLGWSY 555 +++ V+ A I A F G++ L+ G+GT+L+V++ + + GWS+ Sbjct: 245 MISSMVVVAVILALKFGHGEE-----LSKGVGTVLVVAICLFVVAYGWSW 289
>AK107047:Os02g0265100 | Length = 97 Score = 29.3 bits (64), Expect = 5.3 Identities = 23/72 (31%), Positives = 30/72 (41%) Frame = +3 Query: 348 VFVGRAQSRLLLHAPRQPVPGHIYSSGGPNLSRKFQSRKGSAQVCAGCWDWDPAPRISCG 527 V+ GRA L H R+P P ++G R+ + RKG+ C W R SCG Sbjct: 34 VWSGRAPPPRLHHPRRRPPPPTAAAAGAARRRRRRRRRKGA------CCGW--CRRASCG 85 Query: 528 SQDLPGLELRWR 563 G R R Sbjct: 86 GWAPSGCARRCR 97
>AK066045:Os07g0476900 | Length = 301 Score = 28.9 bits (63), Expect = 6.9 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 9/57 (15%) Frame = +1 Query: 118 ASPRQFAGAFPQGGRASTRTK-------RLRGVAVAMALK--EEEPESSRSRFAGGG 261 A GA P G S R+K R RG AV A+ E+ PE+++ + GGG Sbjct: 12 AGSTSLGGATPASGGGSGRSKTARFLRRRRRGGAVRAAVSGTEQAPETTKKKGGGGG 68
>AY271618:Os01g0609300 | Length = 1457 Score = 28.5 bits (62), Expect = 9.0 Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 12/214 (5%) Frame = +1 Query: 100 HDHGGTASPRQFAGAFPQGGRASTRTKRLRGVAVAMALKEEEPESSRSRFAGGGLSW--D 273 HD G PR+ G T +A+A L ++ S + + G G+ Sbjct: 181 HDVSGIIKPRRMTLLLGPPGSGKTTLL----LALAGRLGKDLKASGKVTYNGHGMEEFVP 236 Query: 274 PRMEIGVPYEQRPVNEYSALKESTLYSWAELSPGSFFMRLGSLCLVTFTVLAAPISAASF 453 R + + E + ++E+ +S GS F L T L+ AA+ Sbjct: 237 ERTAAYISQHDLHIGEMT-VRETLAFSARCQGVGSRFDML--------TELSRREKAANI 287 Query: 454 SPGKDPLKFVLAAGIG-------TLLLVSLVVLRIYLGWSYVGDRLLSAVVPYEETGWYD 612 P D F+ AA +G T ++ ++ L I + VGD +L + + Sbjct: 288 KPDADIDAFMKAAAMGGQEANVNTDYILKILGLEICAD-TMVGDEMLRGISGGQRKRVTT 346 Query: 613 GQMWVKPAEVLARDRL---LGSYKVKPVINLLKQ 705 G+M V PA L D + L S ++N L+Q Sbjct: 347 GEMLVGPARALFMDEISTGLDSSTTFQIVNSLRQ 380
>AK100135:Os01g0609300 | Length = 1293 Score = 28.5 bits (62), Expect = 9.0 Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 12/214 (5%) Frame = +1 Query: 100 HDHGGTASPRQFAGAFPQGGRASTRTKRLRGVAVAMALKEEEPESSRSRFAGGGLSW--D 273 HD G PR+ G T +A+A L ++ S + + G G+ Sbjct: 17 HDVSGIIKPRRMTLLLGPPGSGKTTLL----LALAGRLGKDLKASGKVTYNGHGMEEFVP 72 Query: 274 PRMEIGVPYEQRPVNEYSALKESTLYSWAELSPGSFFMRLGSLCLVTFTVLAAPISAASF 453 R + + E + ++E+ +S GS F L T L+ AA+ Sbjct: 73 ERTAAYISQHDLHIGEMT-VRETLAFSARCQGVGSRFDML--------TELSRREKAANI 123 Query: 454 SPGKDPLKFVLAAGIG-------TLLLVSLVVLRIYLGWSYVGDRLLSAVVPYEETGWYD 612 P D F+ AA +G T ++ ++ L I + VGD +L + + Sbjct: 124 KPDADIDAFMKAAAMGGQEANVNTDYILKILGLEICAD-TMVGDEMLRGISGGQRKRVTT 182 Query: 613 GQMWVKPAEVLARDRL---LGSYKVKPVINLLKQ 705 G+M V PA L D + L S ++N L+Q Sbjct: 183 GEMLVGPARALFMDEISTGLDSSTTFQIVNSLRQ 216 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 30,596,483 Number of extensions: 716579 Number of successful extensions: 2509 Number of sequences better than 10.0: 9 Number of HSP's gapped: 2506 Number of HSP's successfully gapped: 9 Length of query: 372 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 270 Effective length of database: 11,315,673 Effective search space: 3055231710 Effective search space used: 3055231710 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)