Clone Name | FLbaf93h12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK072982:Os07g0561300 | 184 | 1e-46 | 2 | AK103093:Os10g0438500 | 47 | 2e-05 | 3 | AK099592:Os03g0822800 | 32 | 0.86 | 4 | Os01g0356400:Os01g0356400 | 31 | 1.9 | 5 | Os03g0327800:Os03g0327800 | 30 | 2.5 | 6 | Os01g0356800:Os01g0356800 | 30 | 3.3 | 7 | AK065335:Os09g0352400 | 29 | 7.2 | 8 | Os05g0139100:Os05g0139100 | 29 | 7.2 | 9 | Os04g0433300:Os04g0433300 | 28 | 9.4 |
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>AK072982:Os07g0561300 | Length = 168 Score = 184 bits (466), Expect = 1e-46 Identities = 112/169 (66%), Positives = 124/169 (73%), Gaps = 5/169 (2%) Frame = +3 Query: 237 MAIGQTMPKGSLATSLSFPSSGSTRILGRKRVAVXXXXXXXXXXXX-VRTLRKQRSIRFH 413 MAIGQ K SL+TSLSF S STRILGRKRVAV VRTLRKQRS R H Sbjct: 1 MAIGQAKTKSSLSTSLSF-SCSSTRILGRKRVAVSPAPPPSGGPHSPVRTLRKQRSTRLH 59 Query: 414 MDDTICLLESLPQDVLVKVLCKVNHSDLRQLLLVSKPVSEATVVAKELHFAFATPSKASA 593 MDD + LLESLPQDVL+KVLCKVNHSDLR LLLVSK VSEATVVA+E HFAFATPS +A Sbjct: 60 MDDAVSLLESLPQDVLIKVLCKVNHSDLRPLLLVSKQVSEATVVAREQHFAFATPSSKAA 119 Query: 594 --DGEEEDDGPGAPK-QHRVARSR-CRGVNLASVAVNLSASFSSLMSEV 728 GEEE++ PGAPK Q RVARS G NLAS++VNL +F S + E+ Sbjct: 120 LRGGEEEEEAPGAPKLQRRVARSSPVWGKNLASISVNLFEAFESEVVEM 168
>AK103093:Os10g0438500 | Length = 262 Score = 47.4 bits (111), Expect = 2e-05 Identities = 19/51 (37%), Positives = 35/51 (68%) Frame = +3 Query: 435 LESLPQDVLVKVLCKVNHSDLRQLLLVSKPVSEATVVAKELHFAFATPSKA 587 LESLP ++L+K++C ++H L + VSK + +A +A++ HF + TP ++ Sbjct: 105 LESLPLELLIKIICCLHHDQLNIVFHVSKRIRKAVELARQYHFNYTTPDRS 155
>AK099592:Os03g0822800 | Length = 176 Score = 32.0 bits (71), Expect = 0.86 Identities = 21/47 (44%), Positives = 28/47 (59%) Frame = -2 Query: 576 ASRRRNAAPWQPLLLR*LASTQGGAASGRCGSPCTGL*PRHLEAAIR 436 +SRRR AAP PL+LR +AS++ G S R SP R A++R Sbjct: 18 SSRRRFAAPPSPLVLRAVASSRDG-PSTRLSSPAPAPPRRRRRASVR 63
>Os01g0356400:Os01g0356400 | Length = 471 Score = 30.8 bits (68), Expect = 1.9 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = -3 Query: 299 AAWEAQARGKRPLRHSLSNCHFPLRLVNSTAAVAYL 192 AAW + P+RH+L C +PL L+N++ AV L Sbjct: 278 AAWAT--KDNNPVRHALLRCFWPLFLLNASLAVLRL 311
>Os03g0327800:Os03g0327800 | Length = 392 Score = 30.4 bits (67), Expect = 2.5 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 Query: 479 GEPQRPEAAPPCVEASQRSNSGCQGAAFRLRDAVQ 583 GEP +A PP A+++ N C GA F++ A+Q Sbjct: 340 GEPTI-QALPPAAAAAKKPNGSCVGATFQIGSALQ 373
>Os01g0356800:Os01g0356800 | Length = 5436 Score = 30.0 bits (66), Expect = 3.3 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +2 Query: 26 NTIT*QVGLLRVQPTFLHQPSAIGLGTKCTATPE*RDRKEEEE 154 NT++ QVG++ F+ S+ GL CT + D++EEEE Sbjct: 1762 NTMSLQVGMMEENTNFIQVQSS-GLEKDCTRFEKLNDKREEEE 1803
>AK065335:Os09g0352400 | Length = 460 Score = 28.9 bits (63), Expect = 7.2 Identities = 16/58 (27%), Positives = 27/58 (46%) Frame = +3 Query: 441 SLPQDVLVKVLCKVNHSDLRQLLLVSKPVSEATVVAKELHFAFATPSKASADGEEEDD 614 S+P + K+L + + L +P + AT A F+F P K + E++DD Sbjct: 53 SIPSSLSAKILREALTQQQEESLADQRPAAAATA-APSPSFSFPVPKKDGEEDEDDDD 109
>Os05g0139100:Os05g0139100 | Length = 505 Score = 28.9 bits (63), Expect = 7.2 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +2 Query: 410 PHGRHHLPSRIAASRCLGQSPVQGEPQRPEAAPPCVEASQRSNSGCQG 553 P RH L + AA+ + Q E + P+A PP A+ ++S C G Sbjct: 240 PTTRHRLDTA-AATATVAQRLPPSEARAPDAPPPAATATATTSSVCSG 286
>Os04g0433300:Os04g0433300 | Length = 308 Score = 28.5 bits (62), Expect = 9.4 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%) Frame = +3 Query: 513 VSKPVSEATVVAKELHFAFATPSKASADGEEEDDGPGAPK----QHRVARSRCRGVNLAS 680 +S P + + H F +P +ASA + PG PK QH+ R C G + S Sbjct: 130 LSFPFAPFSPAPSPFHHRFLSPLRASAVPFSWEHRPGIPKTPARQHQHHRGGCGGGKVYS 189 Query: 681 VAVNLSASFSS 713 + L S S Sbjct: 190 TPLPLPPSLLS 200 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,044,558 Number of extensions: 679316 Number of successful extensions: 2190 Number of sequences better than 10.0: 9 Number of HSP's gapped: 2186 Number of HSP's successfully gapped: 9 Length of query: 386 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 284 Effective length of database: 11,315,673 Effective search space: 3213651132 Effective search space used: 3213651132 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)