ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf93h12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK072982:Os07g0561300 184 1e-46
2AK103093:Os10g0438500 47 2e-05
3AK099592:Os03g0822800 32 0.86
4Os01g0356400:Os01g0356400 31 1.9
5Os03g0327800:Os03g0327800 30 2.5
6Os01g0356800:Os01g0356800 30 3.3
7AK065335:Os09g0352400 29 7.2
8Os05g0139100:Os05g0139100 29 7.2
9Os04g0433300:Os04g0433300 28 9.4

>AK072982:Os07g0561300 |
          Length = 168
 Score =  184 bits (466), Expect = 1e-46
 Identities = 112/169 (66%), Positives = 124/169 (73%), Gaps = 5/169 (2%)
 Frame = +3

Query: 237 MAIGQTMPKGSLATSLSFPSSGSTRILGRKRVAVXXXXXXXXXXXX-VRTLRKQRSIRFH 413
           MAIGQ   K SL+TSLSF S  STRILGRKRVAV             VRTLRKQRS R H
Sbjct: 1   MAIGQAKTKSSLSTSLSF-SCSSTRILGRKRVAVSPAPPPSGGPHSPVRTLRKQRSTRLH 59

Query: 414 MDDTICLLESLPQDVLVKVLCKVNHSDLRQLLLVSKPVSEATVVAKELHFAFATPSKASA 593
           MDD + LLESLPQDVL+KVLCKVNHSDLR LLLVSK VSEATVVA+E HFAFATPS  +A
Sbjct: 60  MDDAVSLLESLPQDVLIKVLCKVNHSDLRPLLLVSKQVSEATVVAREQHFAFATPSSKAA 119

Query: 594 --DGEEEDDGPGAPK-QHRVARSR-CRGVNLASVAVNLSASFSSLMSEV 728
              GEEE++ PGAPK Q RVARS    G NLAS++VNL  +F S + E+
Sbjct: 120 LRGGEEEEEAPGAPKLQRRVARSSPVWGKNLASISVNLFEAFESEVVEM 168



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>AK103093:Os10g0438500 |
          Length = 262

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 19/51 (37%), Positives = 35/51 (68%)
 Frame = +3

Query: 435 LESLPQDVLVKVLCKVNHSDLRQLLLVSKPVSEATVVAKELHFAFATPSKA 587
           LESLP ++L+K++C ++H  L  +  VSK + +A  +A++ HF + TP ++
Sbjct: 105 LESLPLELLIKIICCLHHDQLNIVFHVSKRIRKAVELARQYHFNYTTPDRS 155



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>AK099592:Os03g0822800 |
          Length = 176

 Score = 32.0 bits (71), Expect = 0.86
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = -2

Query: 576 ASRRRNAAPWQPLLLR*LASTQGGAASGRCGSPCTGL*PRHLEAAIR 436
           +SRRR AAP  PL+LR +AS++ G  S R  SP      R   A++R
Sbjct: 18  SSRRRFAAPPSPLVLRAVASSRDG-PSTRLSSPAPAPPRRRRRASVR 63



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>Os01g0356400:Os01g0356400 |
          Length = 471

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -3

Query: 299 AAWEAQARGKRPLRHSLSNCHFPLRLVNSTAAVAYL 192
           AAW    +   P+RH+L  C +PL L+N++ AV  L
Sbjct: 278 AAWAT--KDNNPVRHALLRCFWPLFLLNASLAVLRL 311



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>Os03g0327800:Os03g0327800 |
          Length = 392

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 479 GEPQRPEAAPPCVEASQRSNSGCQGAAFRLRDAVQ 583
           GEP   +A PP   A+++ N  C GA F++  A+Q
Sbjct: 340 GEPTI-QALPPAAAAAKKPNGSCVGATFQIGSALQ 373



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>Os01g0356800:Os01g0356800 |
          Length = 5436

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +2

Query: 26   NTIT*QVGLLRVQPTFLHQPSAIGLGTKCTATPE*RDRKEEEE 154
            NT++ QVG++     F+   S+ GL   CT   +  D++EEEE
Sbjct: 1762 NTMSLQVGMMEENTNFIQVQSS-GLEKDCTRFEKLNDKREEEE 1803



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>AK065335:Os09g0352400 |
          Length = 460

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +3

Query: 441 SLPQDVLVKVLCKVNHSDLRQLLLVSKPVSEATVVAKELHFAFATPSKASADGEEEDD 614
           S+P  +  K+L +       + L   +P + AT  A    F+F  P K   + E++DD
Sbjct: 53  SIPSSLSAKILREALTQQQEESLADQRPAAAATA-APSPSFSFPVPKKDGEEDEDDDD 109



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>Os05g0139100:Os05g0139100 |
          Length = 505

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 410 PHGRHHLPSRIAASRCLGQSPVQGEPQRPEAAPPCVEASQRSNSGCQG 553
           P  RH L +  AA+  + Q     E + P+A PP   A+  ++S C G
Sbjct: 240 PTTRHRLDTA-AATATVAQRLPPSEARAPDAPPPAATATATTSSVCSG 286



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>Os04g0433300:Os04g0433300 |
          Length = 308

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
 Frame = +3

Query: 513 VSKPVSEATVVAKELHFAFATPSKASADGEEEDDGPGAPK----QHRVARSRCRGVNLAS 680
           +S P +  +      H  F +P +ASA     +  PG PK    QH+  R  C G  + S
Sbjct: 130 LSFPFAPFSPAPSPFHHRFLSPLRASAVPFSWEHRPGIPKTPARQHQHHRGGCGGGKVYS 189

Query: 681 VAVNLSASFSS 713
             + L  S  S
Sbjct: 190 TPLPLPPSLLS 200


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 31,044,558
Number of extensions: 679316
Number of successful extensions: 2190
Number of sequences better than 10.0: 9
Number of HSP's gapped: 2186
Number of HSP's successfully gapped: 9
Length of query: 386
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 284
Effective length of database: 11,315,673
Effective search space: 3213651132
Effective search space used: 3213651132
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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