Clone Name | FLbaf93h12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | O65416:FB240_ARATH F-box protein At4g21510 - Arabidopsis thalian... | 75 | 4e-13 | 2 | Q9S9T6:FB220_ARATH Putative F-box protein At4g05010 - Arabidopsi... | 60 | 2e-08 | 3 | Q5XF11:FB248_ARATH F-box protein At4g35930 - Arabidopsis thalian... | 53 | 2e-06 | 4 | Q9SN20:FB200_ARATH Putative F-box protein At3g49980 - Arabidopsi... | 33 | 1.7 | 5 | Q91V45:KISSR_MOUSE KiSS-1 receptor - Mus musculus (Mouse) | 32 | 5.0 |
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>O65416:FB240_ARATH F-box protein At4g21510 - Arabidopsis thaliana (Mouse-ear cress)| Length = 225 Score = 75.5 bits (184), Expect = 4e-13 Identities = 59/159 (37%), Positives = 81/159 (50%), Gaps = 29/159 (18%) Frame = +3 Query: 306 TRILGRKRVAVXXXXXXXXXXXXVR------------TLRKQRS---IRFHMDDTICLLE 440 TR LGRKR+ + V +L++QRS I LE Sbjct: 66 TRGLGRKRILISSCVRESLSRSAVEIPVVSESPPVKSSLKRQRSRITIVSSSSSEKSRLE 125 Query: 441 SLPQDVLVKVLCKVNHSDLRQLLLVSKPVSEATVVAKELHFAFATPSKA-----SADGEE 605 LPQD+L++V+C V+H DL+ L LVSK + EA++VAK LHFA+ TP K S D EE Sbjct: 126 CLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAKTLHFAYTTPKKTRAFRNSIDLEE 185 Query: 606 -------EDD--GPGAPKQHRVARSRCRGVNLASVAVNL 695 EDD P AP+ +R +++ R L+SV+ L Sbjct: 186 VSDSRHQEDDIEPPNAPRHYRWTKAK-RKEQLSSVSAAL 223
>Q9S9T6:FB220_ARATH Putative F-box protein At4g05010 - Arabidopsis thaliana (Mouse-ear| cress) Length = 164 Score = 59.7 bits (143), Expect = 2e-08 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 15/127 (11%) Frame = +3 Query: 306 TRILGRKRVAVXXXXXXXXXXXXVRTLRKQRSIRFHMDDTICLLESLPQDVLVKVLCKVN 485 TR LGRKR+ + R + + LLE+L QD+L++VLC V+ Sbjct: 27 TRGLGRKRILISKRAPENDSPPVKRPSHETT------ESCRSLLETLHQDILIRVLCHVD 80 Query: 486 HSDLRQLLLVSKPVSEATVVAKELHFAFATPSKA---------------SADGEEEDDGP 620 H DL L VSK + +A + AK+ HF ++TP K S+ ++E + P Sbjct: 81 HEDLATLKRVSKTIRKAVIEAKKSHFDYSTPKKRLPFRDAILILDSNSNSSSQDDEMEPP 140 Query: 621 GAPKQHR 641 AP + R Sbjct: 141 NAPIRRR 147
>Q5XF11:FB248_ARATH F-box protein At4g35930 - Arabidopsis thaliana (Mouse-ear cress)| Length = 321 Score = 53.1 bits (126), Expect = 2e-06 Identities = 21/51 (41%), Positives = 37/51 (72%) Frame = +3 Query: 435 LESLPQDVLVKVLCKVNHSDLRQLLLVSKPVSEATVVAKELHFAFATPSKA 587 LESLP D+LVK++C ++H L+ + VS+ + AT++A++ HF + TP ++ Sbjct: 162 LESLPMDLLVKIVCHLHHDQLKAVFHVSQRIRMATILARQYHFNYTTPDRS 212
>Q9SN20:FB200_ARATH Putative F-box protein At3g49980 - Arabidopsis thaliana (Mouse-ear| cress) Length = 382 Score = 33.5 bits (75), Expect = 1.7 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Frame = +3 Query: 441 SLPQDVLVKVLCKVNHSDLRQLLLVSKPVSEATVVAKELHFAFATPSKASADGEEEDDGP 620 +LPQ++L ++LC+V + L+QL L K + F T S+ D Sbjct: 4 NLPQELLEEILCRVPATSLKQLRLTCKEWNRL--------FNDRTFSRKHFD-------- 47 Query: 621 GAPKQH--RVARSRCRGVNLASVAVNLSASFSS 713 APKQ V RCR L+S+++NL + F S Sbjct: 48 KAPKQFLITVLEERCR---LSSLSINLHSGFPS 77
>Q91V45:KISSR_MOUSE KiSS-1 receptor - Mus musculus (Mouse)| Length = 396 Score = 32.0 bits (71), Expect = 5.0 Identities = 20/54 (37%), Positives = 27/54 (50%) Frame = +2 Query: 377 AHSAQAAQH*VPHGRHHLPSRIAASRCLGQSPVQGEPQRPEAAPPCVEASQRSN 538 AHS +AA H VPH R P RI +SP EP P PC ++ + ++ Sbjct: 352 AHSDRAATHTVPHSRAAHPVRI-------RSP---EPGNPVVRSPCAQSERTAS 395 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 186,564,350 Number of extensions: 3834245 Number of successful extensions: 10530 Number of sequences better than 10.0: 5 Number of HSP's gapped: 10522 Number of HSP's successfully gapped: 5 Length of query: 386 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 271 Effective length of database: 69,142,514 Effective search space: 18737621294 Effective search space used: 18737621294 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)