ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf93h12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001066520.1| Oryza sativa (japonica cultivar-group) Os07g... 252 2e-63
2dbj|AK072982.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 2e-63
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 176 1e-40
4dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic D... 176 1e-40
5dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic D... 176 1e-40
6gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, com... 48 0.071
7gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell ... 48 0.071
8emb|AL844583.6| Mouse DNA sequence from clone RP23-240F13 on chr... 44 1.1
9gb|AC100870.7| Homo sapiens chromosome 8, clone RP11-758H6, comp... 42 4.4
10emb|CR855019.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 4.4
11dbj|AK238814.1| Sus scrofa mRNA, clone:THY010033G10, expressed i... 42 4.4
12dbj|AK232307.1| Sus scrofa mRNA, clone:LVR010017C10, expressed i... 42 4.4
13ref|NM_001058562.1| Oryza sativa (japonica cultivar-group) Os04g... 42 4.4
14emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 4.4
15gb|AC152753.1| Mus musculus chromosome 17 clone RP23-65L9, compl... 42 4.4
16gb|AC163616.3| Mus musculus BAC clone RP23-114P22 from chromosom... 42 4.4
17gb|AC114824.5| Mus musculus BAC clone RP23-342J11 from chromosom... 42 4.4
18dbj|AK124714.1| Homo sapiens cDNA FLJ42724 fis, clone BRAWH2000370 42 4.4
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.4
20emb|AL590431.11| Human DNA sequence from clone RP11-205M9 on chr... 42 4.4
21emb|AL583824.16| Human DNA sequence from clone RP11-79M19 on chr... 42 4.4
22emb|AL354980.16| Human DNA sequence from clone RP11-137P24 on ch... 42 4.4
23gb|AC027553.6| Homo sapiens, clone RP11-53O13, complete sequence 42 4.4
24emb|AL356278.8| Human DNA sequence from clone RP11-515J24 on chr... 42 4.4
25emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4,... 42 4.4
26gb|AC009426.8|AC009426 Homo sapiens, clone RP11-45H19, complete ... 42 4.4
27gb|AC138646.3| Homo sapiens chromosome 8, clone RP11-1114I9, com... 42 4.4
28gb|AC021299.17| Homo sapiens chromosome 18, clone RP11-159K14, c... 42 4.4
29dbj|AK070186.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 4.4
30gb|AY609816.1| Sus scrofa clone Clu_32634.scr.msk.p1.Contig1, mR... 42 4.4
31gb|AC147972.3| Gallus gallus BAC clone CH261-78M4 from chromosom... 42 4.4
32emb|AL831723.8| Mouse DNA sequence from clone RP23-100C7 on chro... 42 4.4
33ref|NM_138885.1| Rattus norvegicus golgi autoantigen, golgin sub... 42 4.4

>ref|NM_001066520.1| Oryza sativa (japonica cultivar-group) Os07g0561300 (Os07g0561300)
           mRNA, complete cds
          Length = 1145
 Score =  252 bits (127), Expect = 2e-63
 Identities = 293/347 (84%), Gaps = 6/347 (1%)
 Strand = Plus / Plus

                                                                       
Query: 234 aaaatggcaattggacagactatgccgaaggggtctcttgccacgagcttgagcttccca 293
           |||||||||||||||||| | | | ||||| | |||||  ||||||||||||||||| | 
Sbjct: 317 aaaatggcaattggacaggcgaagacgaagagctctctctccacgagcttgagcttctct 376

                                                                       
Query: 294 agcagcggcagcacaaggatcctggggaggaagagggtcgccgtttctccggctccgagc 353
            |||   ||||||| ||||||||||||||||||||||||||||| || |||||||||  |
Sbjct: 377 tgca---gcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgccc 433

                                                                       
Query: 354 ccctc---aggcccgcactccccggtgcgcactctgcgcaagcagcgcagcattaggttc 410
           |||||    ||||||||||| |||||||| ||||| ||||||||||| ||||  ||| ||
Sbjct: 434 ccctccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctc 493

                                                                       
Query: 411 cacatggacgacaccatctgccttctcgaatcgctgcctcaagatgtcttggtcaaagtc 470
           |||||||||||| || || |||| |||||||| |||||||||||||||||| | || |||
Sbjct: 494 cacatggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttgattaaggtc 553

                                                                       
Query: 471 ctgtgcaaggtgaaccacagcgacctgaggcagctcctccttgtgtcgaagccagtcagc 530
            ||||||||||||||||||| |||||||||| ||| ||||| ||||| || | ||| |||
Sbjct: 554 ttgtgcaaggtgaaccacagtgacctgaggccgctgctcctagtgtcaaaacaagttagc 613

                                                          
Query: 531 gaagcaacagtggttgccaaggagctgcatttcgccttcgcgacgcc 577
           |||||||| |||||||| |  |||| ||||||||| || ||||||||
Sbjct: 614 gaagcaacggtggttgcgagagagcagcatttcgcgtttgcgacgcc 660



 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 881  ttcttcaatgctgcgattgaagaggacacg 910
            ||||||||||||| |||||||||| |||||
Sbjct: 1042 ttcttcaatgctgtgattgaagagaacacg 1071



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>dbj|AK072982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149I22, full
           insert sequence
          Length = 1146

 Score =  252 bits (127), Expect = 2e-63
 Identities = 293/347 (84%), Gaps = 6/347 (1%)
 Strand = Plus / Plus

                                                                       
Query: 234 aaaatggcaattggacagactatgccgaaggggtctcttgccacgagcttgagcttccca 293
           |||||||||||||||||| | | | ||||| | |||||  ||||||||||||||||| | 
Sbjct: 318 aaaatggcaattggacaggcgaagacgaagagctctctctccacgagcttgagcttctct 377

                                                                       
Query: 294 agcagcggcagcacaaggatcctggggaggaagagggtcgccgtttctccggctccgagc 353
            |||   ||||||| ||||||||||||||||||||||||||||| || |||||||||  |
Sbjct: 378 tgca---gcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgccc 434

                                                                       
Query: 354 ccctc---aggcccgcactccccggtgcgcactctgcgcaagcagcgcagcattaggttc 410
           |||||    ||||||||||| |||||||| ||||| ||||||||||| ||||  ||| ||
Sbjct: 435 ccctccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctc 494

                                                                       
Query: 411 cacatggacgacaccatctgccttctcgaatcgctgcctcaagatgtcttggtcaaagtc 470
           |||||||||||| || || |||| |||||||| |||||||||||||||||| | || |||
Sbjct: 495 cacatggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttgattaaggtc 554

                                                                       
Query: 471 ctgtgcaaggtgaaccacagcgacctgaggcagctcctccttgtgtcgaagccagtcagc 530
            ||||||||||||||||||| |||||||||| ||| ||||| ||||| || | ||| |||
Sbjct: 555 ttgtgcaaggtgaaccacagtgacctgaggccgctgctcctagtgtcaaaacaagttagc 614

                                                          
Query: 531 gaagcaacagtggttgccaaggagctgcatttcgccttcgcgacgcc 577
           |||||||| |||||||| |  |||| ||||||||| || ||||||||
Sbjct: 615 gaagcaacggtggttgcgagagagcagcatttcgcgtttgcgacgcc 661



 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 881  ttcttcaatgctgcgattgaagaggacacg 910
            ||||||||||||| |||||||||| |||||
Sbjct: 1043 ttcttcaatgctgtgattgaagagaacacg 1072



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  176 bits (89), Expect = 1e-40
 Identities = 198/233 (84%), Gaps = 6/233 (2%)
 Strand = Plus / Minus

                                                                            
Query: 234      aaaatggcaattggacagactatgccgaaggggtctcttgccacgagcttgagcttccca 293
                |||||||||||||||||| | | | ||||| | |||||  ||||||||||||||||| | 
Sbjct: 22358709 aaaatggcaattggacaggcgaagacgaagagctctctctccacgagcttgagcttctct 22358650

                                                                            
Query: 294      agcagcggcagcacaaggatcctggggaggaagagggtcgccgtttctccggctccgagc 353
                 |||   ||||||| ||||||||||||||||||||||||||||| || |||||||||  |
Sbjct: 22358649 tgca---gcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgccc 22358593

                                                                            
Query: 354      ccctc---aggcccgcactccccggtgcgcactctgcgcaagcagcgcagcattaggttc 410
                |||||    ||||||||||| |||||||| ||||| ||||||||||| ||||  ||| ||
Sbjct: 22358592 ccctccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctc 22358533

                                                                     
Query: 411      cacatggacgacaccatctgccttctcgaatcgctgcctcaagatgtcttggt 463
                |||||||||||| || || |||| |||||||| ||||||||||||||||||||
Sbjct: 22358532 cacatggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttggt 22358480



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                            
Query: 472      tgtgcaaggtgaaccacagcgacctgaggcagctcctccttgtgtcgaagccagtcagcg 531
                ||||||||||||||||||| |||||||||| ||| ||||| ||||| || | ||| ||||
Sbjct: 22358356 tgtgcaaggtgaaccacagtgacctgaggccgctgctcctagtgtcaaaacaagttagcg 22358297

                     
Query: 532      aagca 536
                |||||
Sbjct: 22358296 aagca 22358292



 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 881      ttcttcaatgctgcgattgaagaggacacg 910
                ||||||||||||| |||||||||| |||||
Sbjct: 22357751 ttcttcaatgctgtgattgaagagaacacg 22357722



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>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0567H04
          Length = 181420

 Score =  176 bits (89), Expect = 1e-40
 Identities = 198/233 (84%), Gaps = 6/233 (2%)
 Strand = Plus / Minus

                                                                          
Query: 234    aaaatggcaattggacagactatgccgaaggggtctcttgccacgagcttgagcttccca 293
              |||||||||||||||||| | | | ||||| | |||||  ||||||||||||||||| | 
Sbjct: 163955 aaaatggcaattggacaggcgaagacgaagagctctctctccacgagcttgagcttctct 163896

                                                                          
Query: 294    agcagcggcagcacaaggatcctggggaggaagagggtcgccgtttctccggctccgagc 353
               |||   ||||||| ||||||||||||||||||||||||||||| || |||||||||  |
Sbjct: 163895 tgca---gcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgccc 163839

                                                                          
Query: 354    ccctc---aggcccgcactccccggtgcgcactctgcgcaagcagcgcagcattaggttc 410
              |||||    ||||||||||| |||||||| ||||| ||||||||||| ||||  ||| ||
Sbjct: 163838 ccctccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctc 163779

                                                                   
Query: 411    cacatggacgacaccatctgccttctcgaatcgctgcctcaagatgtcttggt 463
              |||||||||||| || || |||| |||||||| ||||||||||||||||||||
Sbjct: 163778 cacatggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttggt 163726



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                          
Query: 472    tgtgcaaggtgaaccacagcgacctgaggcagctcctccttgtgtcgaagccagtcagcg 531
              ||||||||||||||||||| |||||||||| ||| ||||| ||||| || | ||| ||||
Sbjct: 163602 tgtgcaaggtgaaccacagtgacctgaggccgctgctcctagtgtcaaaacaagttagcg 163543

                   
Query: 532    aagca 536
              |||||
Sbjct: 163542 aagca 163538



 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 881    ttcttcaatgctgcgattgaagaggacacg 910
              ||||||||||||| |||||||||| |||||
Sbjct: 162997 ttcttcaatgctgtgattgaagagaacacg 162968



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>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0406F06
          Length = 144533

 Score =  176 bits (89), Expect = 1e-40
 Identities = 198/233 (84%), Gaps = 6/233 (2%)
 Strand = Plus / Minus

                                                                         
Query: 234   aaaatggcaattggacagactatgccgaaggggtctcttgccacgagcttgagcttccca 293
             |||||||||||||||||| | | | ||||| | |||||  ||||||||||||||||| | 
Sbjct: 19776 aaaatggcaattggacaggcgaagacgaagagctctctctccacgagcttgagcttctct 19717

                                                                         
Query: 294   agcagcggcagcacaaggatcctggggaggaagagggtcgccgtttctccggctccgagc 353
              |||   ||||||| ||||||||||||||||||||||||||||| || |||||||||  |
Sbjct: 19716 tgca---gcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgccc 19660

                                                                         
Query: 354   ccctc---aggcccgcactccccggtgcgcactctgcgcaagcagcgcagcattaggttc 410
             |||||    ||||||||||| |||||||| ||||| ||||||||||| ||||  ||| ||
Sbjct: 19659 ccctccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctc 19600

                                                                  
Query: 411   cacatggacgacaccatctgccttctcgaatcgctgcctcaagatgtcttggt 463
             |||||||||||| || || |||| |||||||| ||||||||||||||||||||
Sbjct: 19599 cacatggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttggt 19547



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                         
Query: 472   tgtgcaaggtgaaccacagcgacctgaggcagctcctccttgtgtcgaagccagtcagcg 531
             ||||||||||||||||||| |||||||||| ||| ||||| ||||| || | ||| ||||
Sbjct: 19423 tgtgcaaggtgaaccacagtgacctgaggccgctgctcctagtgtcaaaacaagttagcg 19364

                  
Query: 532   aagca 536
             |||||
Sbjct: 19363 aagca 19359



 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 881   ttcttcaatgctgcgattgaagaggacacg 910
             ||||||||||||| |||||||||| |||||
Sbjct: 18818 ttcttcaatgctgtgattgaagagaacacg 18789



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>gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, complete sequence
          Length = 185146

 Score = 48.1 bits (24), Expect = 0.071
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 129    gaagggataggaaggaagaggaggaagg 156
              ||||||| ||||||||||||||||||||
Sbjct: 163168 gaagggagaggaaggaagaggaggaagg 163141



 Score = 48.1 bits (24), Expect = 0.071
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 129    gaagggataggaaggaagaggaggaagg 156
              ||||||| ||||||||||||||||||||
Sbjct: 163230 gaagggagaggaaggaagaggaggaagg 163203



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>gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell Park Cancer Institute Mouse BAC)
              complete sequence
          Length = 204950

 Score = 48.1 bits (24), Expect = 0.071
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 129    gaagggataggaaggaagaggaggaagg 156
              ||||||| ||||||||||||||||||||
Sbjct: 126895 gaagggagaggaaggaagaggaggaagg 126922



 Score = 48.1 bits (24), Expect = 0.071
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 129    gaagggataggaaggaagaggaggaagg 156
              ||||||| ||||||||||||||||||||
Sbjct: 126957 gaagggagaggaaggaagaggaggaagg 126984



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>emb|AL844583.6| Mouse DNA sequence from clone RP23-240F13 on chromosome X, complete
             sequence
          Length = 176870

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   tgaagggataggaaggaagagg 149
             ||||||||||||||||||||||
Sbjct: 44826 tgaagggataggaaggaagagg 44847



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>gb|AC100870.7| Homo sapiens chromosome 8, clone RP11-758H6, complete sequence
          Length = 188093

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1113  caataaaagtaaaatcagttt 1133
             |||||||||||||||||||||
Sbjct: 28791 caataaaagtaaaatcagttt 28811



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>emb|CR855019.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0147B06,
             complete sequence
          Length = 85052

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 933   atagtgtaacttatatgtaag 953
             |||||||||||||||||||||
Sbjct: 28077 atagtgtaacttatatgtaag 28057



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>dbj|AK238814.1| Sus scrofa mRNA, clone:THY010033G10, expressed in thymus
          Length = 2335

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 339 tctccggctccgagcccctcaggcc 363
           ||||||||||||||| |||||||||
Sbjct: 394 tctccggctccgagcgcctcaggcc 370



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>dbj|AK232307.1| Sus scrofa mRNA, clone:LVR010017C10, expressed in liver
          Length = 1297

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 339 tctccggctccgagcccctcaggcc 363
           ||||||||||||||| |||||||||
Sbjct: 394 tctccggctccgagcgcctcaggcc 370



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>ref|NM_001058562.1| Oryza sativa (japonica cultivar-group) Os04g0110200 (Os04g0110200)
           mRNA, complete cds
          Length = 907

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 584 ggcctccgctgacggcgaggaagaagacg 612
           ||||||||  |||||||||||||||||||
Sbjct: 82  ggcctccggcgacggcgaggaagaagacg 54



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>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete
             sequence
          Length = 121821

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 584   ggcctccgctgacggcgaggaagaagacg 612
             ||||||||  |||||||||||||||||||
Sbjct: 65751 ggcctccggcgacggcgaggaagaagacg 65723



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>gb|AC152753.1| Mus musculus chromosome 17 clone RP23-65L9, complete sequence
          Length = 211853

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 944   tatatgtaagcgtctgagtgt 964
             |||||||||||||||||||||
Sbjct: 60624 tatatgtaagcgtctgagtgt 60604



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>gb|AC163616.3| Mus musculus BAC clone RP23-114P22 from chromosome 3, complete sequence
          Length = 212857

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    aagggataggaaggaagagga 150
              |||||||||||||||||||||
Sbjct: 110162 aagggataggaaggaagagga 110182



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>gb|AC114824.5| Mus musculus BAC clone RP23-342J11 from chromosome 17, complete sequence
          Length = 216044

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 944    tatatgtaagcgtctgagtgt 964
              |||||||||||||||||||||
Sbjct: 195034 tatatgtaagcgtctgagtgt 195014



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>dbj|AK124714.1| Homo sapiens cDNA FLJ42724 fis, clone BRAWH2000370
          Length = 2457

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 968  aactcatcagaagagaagcat 988
            |||||||||||||||||||||
Sbjct: 2078 aactcatcagaagagaagcat 2098



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 584    ggcctccgctgacggcgaggaagaagacg 612
              ||||||||  |||||||||||||||||||
Sbjct: 590598 ggcctccggcgacggcgaggaagaagacg 590570



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>emb|AL590431.11| Human DNA sequence from clone RP11-205M9 on chromosome 1 Contains the 5'
              end of the gene for nuclear pore membrane glycoprotein
              210-like (LOC91181), the TPM3 gene for tropomyosin 3, a
              novel gene, the gene for NICE-3 protein (NICE-3), the gene
              for NICE-4 protein (NICE-4) and a CpG island, complete
              sequence
          Length = 119460

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 130    aagggataggaaggaagagga 150
              |||||||||||||||||||||
Sbjct: 116401 aagggataggaaggaagagga 116381



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>emb|AL583824.16| Human DNA sequence from clone RP11-79M19 on chromosome 10 Contains part
             of the GPRK5 gene for G protein-coupled receptor kinase 5
             (GRK5) and a novel gene, complete sequence
          Length = 55700

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 137   aggaaggaagaggaggaaggc 157
             |||||||||||||||||||||
Sbjct: 24192 aggaaggaagaggaggaaggc 24212



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>emb|AL354980.16| Human DNA sequence from clone RP11-137P24 on chromosome 1 Contains the
             gene for HS1 binding protein (HAX1) and the 5' end of the
             AQP10 gene for aquaporin 10, complete sequence
          Length = 95571

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 130   aagggataggaaggaagagga 150
             |||||||||||||||||||||
Sbjct: 39859 aagggataggaaggaagagga 39839



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>gb|AC027553.6| Homo sapiens, clone RP11-53O13, complete sequence
          Length = 159914

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 968   aactcatcagaagagaagcat 988
             |||||||||||||||||||||
Sbjct: 59491 aactcatcagaagagaagcat 59471



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>emb|AL356278.8| Human DNA sequence from clone RP11-515J24 on chromosome 6, complete
             sequence
          Length = 182510

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   taggaaggaagaggaggaagg 156
             |||||||||||||||||||||
Sbjct: 36340 taggaaggaagaggaggaagg 36320



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>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06,
              complete sequence
          Length = 143730

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 584    ggcctccgctgacggcgaggaagaagacg 612
              ||||||||  |||||||||||||||||||
Sbjct: 121565 ggcctccggcgacggcgaggaagaagacg 121537



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>gb|AC009426.8|AC009426 Homo sapiens, clone RP11-45H19, complete sequence
          Length = 154313

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 136   taggaaggaagaggaggaagg 156
             |||||||||||||||||||||
Sbjct: 25919 taggaaggaagaggaggaagg 25939



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>gb|AC138646.3| Homo sapiens chromosome 8, clone RP11-1114I9, complete sequence
          Length = 148013

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1113  caataaaagtaaaatcagttt 1133
             |||||||||||||||||||||
Sbjct: 20739 caataaaagtaaaatcagttt 20719



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>gb|AC021299.17| Homo sapiens chromosome 18, clone RP11-159K14, complete sequence
          Length = 168716

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 968   aactcatcagaagagaagcat 988
             |||||||||||||||||||||
Sbjct: 29058 aactcatcagaagagaagcat 29078



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>dbj|AK070186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045L10, full
           insert sequence
          Length = 908

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 584 ggcctccgctgacggcgaggaagaagacg 612
           ||||||||  |||||||||||||||||||
Sbjct: 83  ggcctccggcgacggcgaggaagaagacg 55



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>gb|AY609816.1| Sus scrofa clone Clu_32634.scr.msk.p1.Contig1, mRNA sequence
          Length = 1068

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 339 tctccggctccgagcccctcaggcc 363
           ||||||||||||||| |||||||||
Sbjct: 250 tctccggctccgagcgcctcaggcc 226



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>gb|AC147972.3| Gallus gallus BAC clone CH261-78M4 from chromosome unknown, complete
             sequence
          Length = 197959

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1106  atactatcaataaaagtaaaa 1126
             |||||||||||||||||||||
Sbjct: 30798 atactatcaataaaagtaaaa 30778



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>emb|AL831723.8| Mouse DNA sequence from clone RP23-100C7 on chromosome 4, complete
              sequence
          Length = 171424

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 129    gaagggataggaaggaagaggagga 153
              ||||||| |||||||||||||||||
Sbjct: 114532 gaagggagaggaaggaagaggagga 114508



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>ref|NM_138885.1| Rattus norvegicus golgi autoantigen, golgin subfamily b,
           macrogolgin 1 (Golgb1), mRNA
 dbj|D25543.1|RATGCP60 Rattus norvegicus mRNA for novel golgi-associated protein GCP360,
           complete cds
          Length = 10170

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 497 gaggcagctcctccttgtgtc 517
           |||||||||||||||||||||
Sbjct: 653 gaggcagctcctccttgtgtc 633


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 191,218,231
Number of extensions: 10263619
Number of successful extensions: 222203
Number of sequences better than 10.0: 33
Number of HSP's gapped: 222198
Number of HSP's successfully gapped: 43
Length of query: 1159
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1136
Effective length of database: 18,503,978,556
Effective search space: 21020519639616
Effective search space used: 21020519639616
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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