Clone Name | FLbaf93h12 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_001066520.1| Oryza sativa (japonica cultivar-group) Os07g0561300 (Os07g0561300) mRNA, complete cds Length = 1145 Score = 252 bits (127), Expect = 2e-63 Identities = 293/347 (84%), Gaps = 6/347 (1%) Strand = Plus / Plus Query: 234 aaaatggcaattggacagactatgccgaaggggtctcttgccacgagcttgagcttccca 293 |||||||||||||||||| | | | ||||| | ||||| ||||||||||||||||| | Sbjct: 317 aaaatggcaattggacaggcgaagacgaagagctctctctccacgagcttgagcttctct 376 Query: 294 agcagcggcagcacaaggatcctggggaggaagagggtcgccgtttctccggctccgagc 353 ||| ||||||| ||||||||||||||||||||||||||||| || ||||||||| | Sbjct: 377 tgca---gcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgccc 433 Query: 354 ccctc---aggcccgcactccccggtgcgcactctgcgcaagcagcgcagcattaggttc 410 ||||| ||||||||||| |||||||| ||||| ||||||||||| |||| ||| || Sbjct: 434 ccctccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctc 493 Query: 411 cacatggacgacaccatctgccttctcgaatcgctgcctcaagatgtcttggtcaaagtc 470 |||||||||||| || || |||| |||||||| |||||||||||||||||| | || ||| Sbjct: 494 cacatggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttgattaaggtc 553 Query: 471 ctgtgcaaggtgaaccacagcgacctgaggcagctcctccttgtgtcgaagccagtcagc 530 ||||||||||||||||||| |||||||||| ||| ||||| ||||| || | ||| ||| Sbjct: 554 ttgtgcaaggtgaaccacagtgacctgaggccgctgctcctagtgtcaaaacaagttagc 613 Query: 531 gaagcaacagtggttgccaaggagctgcatttcgccttcgcgacgcc 577 |||||||| |||||||| | |||| ||||||||| || |||||||| Sbjct: 614 gaagcaacggtggttgcgagagagcagcatttcgcgtttgcgacgcc 660 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 881 ttcttcaatgctgcgattgaagaggacacg 910 ||||||||||||| |||||||||| ||||| Sbjct: 1042 ttcttcaatgctgtgattgaagagaacacg 1071
>dbj|AK072982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149I22, full insert sequence Length = 1146 Score = 252 bits (127), Expect = 2e-63 Identities = 293/347 (84%), Gaps = 6/347 (1%) Strand = Plus / Plus Query: 234 aaaatggcaattggacagactatgccgaaggggtctcttgccacgagcttgagcttccca 293 |||||||||||||||||| | | | ||||| | ||||| ||||||||||||||||| | Sbjct: 318 aaaatggcaattggacaggcgaagacgaagagctctctctccacgagcttgagcttctct 377 Query: 294 agcagcggcagcacaaggatcctggggaggaagagggtcgccgtttctccggctccgagc 353 ||| ||||||| ||||||||||||||||||||||||||||| || ||||||||| | Sbjct: 378 tgca---gcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgccc 434 Query: 354 ccctc---aggcccgcactccccggtgcgcactctgcgcaagcagcgcagcattaggttc 410 ||||| ||||||||||| |||||||| ||||| ||||||||||| |||| ||| || Sbjct: 435 ccctccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctc 494 Query: 411 cacatggacgacaccatctgccttctcgaatcgctgcctcaagatgtcttggtcaaagtc 470 |||||||||||| || || |||| |||||||| |||||||||||||||||| | || ||| Sbjct: 495 cacatggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttgattaaggtc 554 Query: 471 ctgtgcaaggtgaaccacagcgacctgaggcagctcctccttgtgtcgaagccagtcagc 530 ||||||||||||||||||| |||||||||| ||| ||||| ||||| || | ||| ||| Sbjct: 555 ttgtgcaaggtgaaccacagtgacctgaggccgctgctcctagtgtcaaaacaagttagc 614 Query: 531 gaagcaacagtggttgccaaggagctgcatttcgccttcgcgacgcc 577 |||||||| |||||||| | |||| ||||||||| || |||||||| Sbjct: 615 gaagcaacggtggttgcgagagagcagcatttcgcgtttgcgacgcc 661 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 881 ttcttcaatgctgcgattgaagaggacacg 910 ||||||||||||| |||||||||| ||||| Sbjct: 1043 ttcttcaatgctgtgattgaagagaacacg 1072
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 176 bits (89), Expect = 1e-40 Identities = 198/233 (84%), Gaps = 6/233 (2%) Strand = Plus / Minus Query: 234 aaaatggcaattggacagactatgccgaaggggtctcttgccacgagcttgagcttccca 293 |||||||||||||||||| | | | ||||| | ||||| ||||||||||||||||| | Sbjct: 22358709 aaaatggcaattggacaggcgaagacgaagagctctctctccacgagcttgagcttctct 22358650 Query: 294 agcagcggcagcacaaggatcctggggaggaagagggtcgccgtttctccggctccgagc 353 ||| ||||||| ||||||||||||||||||||||||||||| || ||||||||| | Sbjct: 22358649 tgca---gcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgccc 22358593 Query: 354 ccctc---aggcccgcactccccggtgcgcactctgcgcaagcagcgcagcattaggttc 410 ||||| ||||||||||| |||||||| ||||| ||||||||||| |||| ||| || Sbjct: 22358592 ccctccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctc 22358533 Query: 411 cacatggacgacaccatctgccttctcgaatcgctgcctcaagatgtcttggt 463 |||||||||||| || || |||| |||||||| |||||||||||||||||||| Sbjct: 22358532 cacatggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttggt 22358480 Score = 65.9 bits (33), Expect = 3e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 472 tgtgcaaggtgaaccacagcgacctgaggcagctcctccttgtgtcgaagccagtcagcg 531 ||||||||||||||||||| |||||||||| ||| ||||| ||||| || | ||| |||| Sbjct: 22358356 tgtgcaaggtgaaccacagtgacctgaggccgctgctcctagtgtcaaaacaagttagcg 22358297 Query: 532 aagca 536 ||||| Sbjct: 22358296 aagca 22358292 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 881 ttcttcaatgctgcgattgaagaggacacg 910 ||||||||||||| |||||||||| ||||| Sbjct: 22357751 ttcttcaatgctgtgattgaagagaacacg 22357722
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 176 bits (89), Expect = 1e-40 Identities = 198/233 (84%), Gaps = 6/233 (2%) Strand = Plus / Minus Query: 234 aaaatggcaattggacagactatgccgaaggggtctcttgccacgagcttgagcttccca 293 |||||||||||||||||| | | | ||||| | ||||| ||||||||||||||||| | Sbjct: 163955 aaaatggcaattggacaggcgaagacgaagagctctctctccacgagcttgagcttctct 163896 Query: 294 agcagcggcagcacaaggatcctggggaggaagagggtcgccgtttctccggctccgagc 353 ||| ||||||| ||||||||||||||||||||||||||||| || ||||||||| | Sbjct: 163895 tgca---gcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgccc 163839 Query: 354 ccctc---aggcccgcactccccggtgcgcactctgcgcaagcagcgcagcattaggttc 410 ||||| ||||||||||| |||||||| ||||| ||||||||||| |||| ||| || Sbjct: 163838 ccctccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctc 163779 Query: 411 cacatggacgacaccatctgccttctcgaatcgctgcctcaagatgtcttggt 463 |||||||||||| || || |||| |||||||| |||||||||||||||||||| Sbjct: 163778 cacatggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttggt 163726 Score = 65.9 bits (33), Expect = 3e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 472 tgtgcaaggtgaaccacagcgacctgaggcagctcctccttgtgtcgaagccagtcagcg 531 ||||||||||||||||||| |||||||||| ||| ||||| ||||| || | ||| |||| Sbjct: 163602 tgtgcaaggtgaaccacagtgacctgaggccgctgctcctagtgtcaaaacaagttagcg 163543 Query: 532 aagca 536 ||||| Sbjct: 163542 aagca 163538 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 881 ttcttcaatgctgcgattgaagaggacacg 910 ||||||||||||| |||||||||| ||||| Sbjct: 162997 ttcttcaatgctgtgattgaagagaacacg 162968
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 176 bits (89), Expect = 1e-40 Identities = 198/233 (84%), Gaps = 6/233 (2%) Strand = Plus / Minus Query: 234 aaaatggcaattggacagactatgccgaaggggtctcttgccacgagcttgagcttccca 293 |||||||||||||||||| | | | ||||| | ||||| ||||||||||||||||| | Sbjct: 19776 aaaatggcaattggacaggcgaagacgaagagctctctctccacgagcttgagcttctct 19717 Query: 294 agcagcggcagcacaaggatcctggggaggaagagggtcgccgtttctccggctccgagc 353 ||| ||||||| ||||||||||||||||||||||||||||| || ||||||||| | Sbjct: 19716 tgca---gcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgccc 19660 Query: 354 ccctc---aggcccgcactccccggtgcgcactctgcgcaagcagcgcagcattaggttc 410 ||||| ||||||||||| |||||||| ||||| ||||||||||| |||| ||| || Sbjct: 19659 ccctccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctc 19600 Query: 411 cacatggacgacaccatctgccttctcgaatcgctgcctcaagatgtcttggt 463 |||||||||||| || || |||| |||||||| |||||||||||||||||||| Sbjct: 19599 cacatggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttggt 19547 Score = 65.9 bits (33), Expect = 3e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 472 tgtgcaaggtgaaccacagcgacctgaggcagctcctccttgtgtcgaagccagtcagcg 531 ||||||||||||||||||| |||||||||| ||| ||||| ||||| || | ||| |||| Sbjct: 19423 tgtgcaaggtgaaccacagtgacctgaggccgctgctcctagtgtcaaaacaagttagcg 19364 Query: 532 aagca 536 ||||| Sbjct: 19363 aagca 19359 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 881 ttcttcaatgctgcgattgaagaggacacg 910 ||||||||||||| |||||||||| ||||| Sbjct: 18818 ttcttcaatgctgtgattgaagagaacacg 18789
>gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, complete sequence Length = 185146 Score = 48.1 bits (24), Expect = 0.071 Identities = 27/28 (96%) Strand = Plus / Minus Query: 129 gaagggataggaaggaagaggaggaagg 156 ||||||| |||||||||||||||||||| Sbjct: 163168 gaagggagaggaaggaagaggaggaagg 163141 Score = 48.1 bits (24), Expect = 0.071 Identities = 27/28 (96%) Strand = Plus / Minus Query: 129 gaagggataggaaggaagaggaggaagg 156 ||||||| |||||||||||||||||||| Sbjct: 163230 gaagggagaggaaggaagaggaggaagg 163203
>gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell Park Cancer Institute Mouse BAC) complete sequence Length = 204950 Score = 48.1 bits (24), Expect = 0.071 Identities = 27/28 (96%) Strand = Plus / Plus Query: 129 gaagggataggaaggaagaggaggaagg 156 ||||||| |||||||||||||||||||| Sbjct: 126895 gaagggagaggaaggaagaggaggaagg 126922 Score = 48.1 bits (24), Expect = 0.071 Identities = 27/28 (96%) Strand = Plus / Plus Query: 129 gaagggataggaaggaagaggaggaagg 156 ||||||| |||||||||||||||||||| Sbjct: 126957 gaagggagaggaaggaagaggaggaagg 126984
>emb|AL844583.6| Mouse DNA sequence from clone RP23-240F13 on chromosome X, complete sequence Length = 176870 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 tgaagggataggaaggaagagg 149 |||||||||||||||||||||| Sbjct: 44826 tgaagggataggaaggaagagg 44847
>gb|AC100870.7| Homo sapiens chromosome 8, clone RP11-758H6, complete sequence Length = 188093 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1113 caataaaagtaaaatcagttt 1133 ||||||||||||||||||||| Sbjct: 28791 caataaaagtaaaatcagttt 28811
>emb|CR855019.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0147B06, complete sequence Length = 85052 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 933 atagtgtaacttatatgtaag 953 ||||||||||||||||||||| Sbjct: 28077 atagtgtaacttatatgtaag 28057
>dbj|AK238814.1| Sus scrofa mRNA, clone:THY010033G10, expressed in thymus Length = 2335 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 339 tctccggctccgagcccctcaggcc 363 ||||||||||||||| ||||||||| Sbjct: 394 tctccggctccgagcgcctcaggcc 370
>dbj|AK232307.1| Sus scrofa mRNA, clone:LVR010017C10, expressed in liver Length = 1297 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 339 tctccggctccgagcccctcaggcc 363 ||||||||||||||| ||||||||| Sbjct: 394 tctccggctccgagcgcctcaggcc 370
>ref|NM_001058562.1| Oryza sativa (japonica cultivar-group) Os04g0110200 (Os04g0110200) mRNA, complete cds Length = 907 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 584 ggcctccgctgacggcgaggaagaagacg 612 |||||||| ||||||||||||||||||| Sbjct: 82 ggcctccggcgacggcgaggaagaagacg 54
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete sequence Length = 121821 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 584 ggcctccgctgacggcgaggaagaagacg 612 |||||||| ||||||||||||||||||| Sbjct: 65751 ggcctccggcgacggcgaggaagaagacg 65723
>gb|AC152753.1| Mus musculus chromosome 17 clone RP23-65L9, complete sequence Length = 211853 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 944 tatatgtaagcgtctgagtgt 964 ||||||||||||||||||||| Sbjct: 60624 tatatgtaagcgtctgagtgt 60604
>gb|AC163616.3| Mus musculus BAC clone RP23-114P22 from chromosome 3, complete sequence Length = 212857 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 aagggataggaaggaagagga 150 ||||||||||||||||||||| Sbjct: 110162 aagggataggaaggaagagga 110182
>gb|AC114824.5| Mus musculus BAC clone RP23-342J11 from chromosome 17, complete sequence Length = 216044 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 944 tatatgtaagcgtctgagtgt 964 ||||||||||||||||||||| Sbjct: 195034 tatatgtaagcgtctgagtgt 195014
>dbj|AK124714.1| Homo sapiens cDNA FLJ42724 fis, clone BRAWH2000370 Length = 2457 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 968 aactcatcagaagagaagcat 988 ||||||||||||||||||||| Sbjct: 2078 aactcatcagaagagaagcat 2098
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 584 ggcctccgctgacggcgaggaagaagacg 612 |||||||| ||||||||||||||||||| Sbjct: 590598 ggcctccggcgacggcgaggaagaagacg 590570
>emb|AL590431.11| Human DNA sequence from clone RP11-205M9 on chromosome 1 Contains the 5' end of the gene for nuclear pore membrane glycoprotein 210-like (LOC91181), the TPM3 gene for tropomyosin 3, a novel gene, the gene for NICE-3 protein (NICE-3), the gene for NICE-4 protein (NICE-4) and a CpG island, complete sequence Length = 119460 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 aagggataggaaggaagagga 150 ||||||||||||||||||||| Sbjct: 116401 aagggataggaaggaagagga 116381
>emb|AL583824.16| Human DNA sequence from clone RP11-79M19 on chromosome 10 Contains part of the GPRK5 gene for G protein-coupled receptor kinase 5 (GRK5) and a novel gene, complete sequence Length = 55700 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 aggaaggaagaggaggaaggc 157 ||||||||||||||||||||| Sbjct: 24192 aggaaggaagaggaggaaggc 24212
>emb|AL354980.16| Human DNA sequence from clone RP11-137P24 on chromosome 1 Contains the gene for HS1 binding protein (HAX1) and the 5' end of the AQP10 gene for aquaporin 10, complete sequence Length = 95571 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 aagggataggaaggaagagga 150 ||||||||||||||||||||| Sbjct: 39859 aagggataggaaggaagagga 39839
>gb|AC027553.6| Homo sapiens, clone RP11-53O13, complete sequence Length = 159914 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 968 aactcatcagaagagaagcat 988 ||||||||||||||||||||| Sbjct: 59491 aactcatcagaagagaagcat 59471
>emb|AL356278.8| Human DNA sequence from clone RP11-515J24 on chromosome 6, complete sequence Length = 182510 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 taggaaggaagaggaggaagg 156 ||||||||||||||||||||| Sbjct: 36340 taggaaggaagaggaggaagg 36320
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 584 ggcctccgctgacggcgaggaagaagacg 612 |||||||| ||||||||||||||||||| Sbjct: 121565 ggcctccggcgacggcgaggaagaagacg 121537
>gb|AC009426.8|AC009426 Homo sapiens, clone RP11-45H19, complete sequence Length = 154313 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 taggaaggaagaggaggaagg 156 ||||||||||||||||||||| Sbjct: 25919 taggaaggaagaggaggaagg 25939
>gb|AC138646.3| Homo sapiens chromosome 8, clone RP11-1114I9, complete sequence Length = 148013 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1113 caataaaagtaaaatcagttt 1133 ||||||||||||||||||||| Sbjct: 20739 caataaaagtaaaatcagttt 20719
>gb|AC021299.17| Homo sapiens chromosome 18, clone RP11-159K14, complete sequence Length = 168716 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 968 aactcatcagaagagaagcat 988 ||||||||||||||||||||| Sbjct: 29058 aactcatcagaagagaagcat 29078
>dbj|AK070186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045L10, full insert sequence Length = 908 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 584 ggcctccgctgacggcgaggaagaagacg 612 |||||||| ||||||||||||||||||| Sbjct: 83 ggcctccggcgacggcgaggaagaagacg 55
>gb|AY609816.1| Sus scrofa clone Clu_32634.scr.msk.p1.Contig1, mRNA sequence Length = 1068 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 339 tctccggctccgagcccctcaggcc 363 ||||||||||||||| ||||||||| Sbjct: 250 tctccggctccgagcgcctcaggcc 226
>gb|AC147972.3| Gallus gallus BAC clone CH261-78M4 from chromosome unknown, complete sequence Length = 197959 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1106 atactatcaataaaagtaaaa 1126 ||||||||||||||||||||| Sbjct: 30798 atactatcaataaaagtaaaa 30778
>emb|AL831723.8| Mouse DNA sequence from clone RP23-100C7 on chromosome 4, complete sequence Length = 171424 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 gaagggataggaaggaagaggagga 153 ||||||| ||||||||||||||||| Sbjct: 114532 gaagggagaggaaggaagaggagga 114508
>ref|NM_138885.1| Rattus norvegicus golgi autoantigen, golgin subfamily b, macrogolgin 1 (Golgb1), mRNA dbj|D25543.1|RATGCP60 Rattus norvegicus mRNA for novel golgi-associated protein GCP360, complete cds Length = 10170 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 gaggcagctcctccttgtgtc 517 ||||||||||||||||||||| Sbjct: 653 gaggcagctcctccttgtgtc 633 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 191,218,231 Number of extensions: 10263619 Number of successful extensions: 222203 Number of sequences better than 10.0: 33 Number of HSP's gapped: 222198 Number of HSP's successfully gapped: 43 Length of query: 1159 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1136 Effective length of database: 18,503,978,556 Effective search space: 21020519639616 Effective search space used: 21020519639616 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)