Clone Name | FLbaf90d14 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_001067001.1| Oryza sativa (japonica cultivar-group) Os07g0647100 (Os07g0647100) mRNA, complete cds Length = 1414 Score = 1106 bits (558), Expect = 0.0 Identities = 914/1032 (88%), Gaps = 3/1032 (0%) Strand = Plus / Plus Query: 109 gagatgtccttcttcttccgggcggcgtcgcggccg---cgttcgtcccagcaggacctc 165 |||||||||||||||||||||||||||||||||||| || |||| | |||||| ||| Sbjct: 260 gagatgtccttcttcttccgggcggcgtcgcggccggcgcgcccgtcgccgcaggagctc 319 Query: 166 gtgcgctccatcaaggactccctcctcgcgctcgacaccaagaccggcgccaaggccctc 225 || |||||||||||||| ||||||||||| |||||||||| ||||||||||||||| || Sbjct: 320 gtccgctccatcaaggagtccctcctcgccctcgacaccaggaccggcgccaaggctctt 379 Query: 226 gaagatgttgagaaaaacatatttacattgagacagacactttctggtgatggagaagtt 285 ||||||||||||||||| ||| ||| ||||| |||||||||||||| |||||||||||| Sbjct: 380 gaagatgttgagaaaaatgtatctactttgaggcagacactttctggcgatggagaagtt 439 Query: 286 gaaccgaaccaggatcatgtcttacagatagcccttgaaatttgcaaggagggtgtcctt 345 ||||| || ||||| || || |||||||||||||||||||||||||||||| ||||||| Sbjct: 440 gaaccaaatcaggaacaggttctacagatagcccttgaaatttgcaaggaggatgtcctt 499 Query: 346 tctctttttgttcagaacctgccttcgttgggttgggagggtagaaaggatcttgcccac 405 || || ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 500 tcgctctttgttcagaatatgccttccttgggttgggagggtagaaaggaccttgcccac 559 Query: 406 tgctggtgcattttgttgaggcagaaggttgatgaaagtcactgctgcgtgcagtatatc 465 |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 560 tgctggagcattttgttgaggcagaaggttgatgaagcctattgctgcgtgcagtatatt 619 Query: 466 gaaaatcatgttgatcttctagatttccttgttgtatgctacaagaacttggaagtcgca 525 ||||||||| |||||||||||||||||||||| || |||||||||||||||||||| ||| Sbjct: 620 gaaaatcattttgatcttctagatttccttgtagtttgctacaagaacttggaagttgca 679 Query: 526 ttgaactgtggaaacatgttgcgagaatgcattaaatatccttcacttgcaaaatatata 585 ||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 680 ttgaactgtgggaatatgttgcgagaatgcataaaatatcctacacttgcaaaatatata 739 Query: 586 ttggagtcaaatagcttcgagttgtttttccagtatgttgaattgccaaactttgatatt 645 |||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 740 ttggagtcaagtagcttcgagttgtttttccagtatgttgaattatcgaactttgatatt 799 Query: 646 gcttctgatgctctgaataccttcaaggatttgctcactaaacatgaagatgcggtctcc 705 ||||||||||||||||| |||||||||||||||||||| |||||||||| || || || Sbjct: 800 gcttctgatgctctgaacaccttcaaggatttgctcaccaaacatgaagccgcagtttct 859 Query: 706 gagtttctcatttcccattatgaacagttctttgaactctacaaaaggcttttaacttct 765 |||||||| ||||||||||||||||||||||| ||||||| ||| ||| ||||||| Sbjct: 860 gagtttctgtgctcccattatgaacagttctttgagctctacacaagacttctaacttca 919 Query: 766 gataattatgtgacaagaagacaatcagtgaagtttctttcagagtttctgttggaggcc 825 ||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 920 actaattatgttacaagaagacaatcagtgaagtttctttcagagtttttgttagaggcc 979 Query: 826 ccaaatgctcagataatgaagcggtatattttggaagttcgttacttgaacattatgatg 885 ||||||||||| |||||||||||||| ||| ||||||| |||| || || || ||||| Sbjct: 980 ccaaatgctcaaataatgaagcggtacattgtggaagtcagttatttaaatatcatgatt 1039 Query: 886 ggtctactaaaggattcaagcaaaaatatcaggatatgttcctttcacatttttaaggta 945 || || || |||||| ||||||||||||||||||||||| |||| |||||||| |||||| Sbjct: 1040 ggcctgctgaaggatacaagcaaaaatatcaggatatgtgccttccacattttcaaggta 1099 Query: 946 tttgttgccaacccaaacaaacctcgtgatattattcaagttttggtagacaaccacaaa 1005 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| | Sbjct: 1100 tttgttgccaatccaaacaagcctcgtgatattattcaagttttggtagacaatcacaga 1159 Query: 1006 gaattattgaagttactccatgctcttcctgcaagcaaaggtgaagatgaccaacttgag 1065 ||| | |||||| |||| |||||| |||||||||||||||| || |||||||| Sbjct: 1160 gaactgttgaagctactaggcaatcttcccacaagcaaaggtgaagacgagcaacttgaa 1219 Query: 1066 gaggagcgagacttgattatcaaggaaattgagaagcttgtgcgcttgtcagtatagacc 1125 |||||| |||| || || ||||||||||| ||||||||||||| | || ||||||||| Sbjct: 1220 gaggagagagatttaatcatcaaggaaatcgagaagcttgtgcattcatcggtatagacc 1279 Query: 1126 ctcaagaaattc 1137 |||||||||||| Sbjct: 1280 ctcaagaaattc 1291
>dbj|AK065269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002K24, full insert sequence Length = 1415 Score = 1106 bits (558), Expect = 0.0 Identities = 914/1032 (88%), Gaps = 3/1032 (0%) Strand = Plus / Plus Query: 109 gagatgtccttcttcttccgggcggcgtcgcggccg---cgttcgtcccagcaggacctc 165 |||||||||||||||||||||||||||||||||||| || |||| | |||||| ||| Sbjct: 261 gagatgtccttcttcttccgggcggcgtcgcggccggcgcgcccgtcgccgcaggagctc 320 Query: 166 gtgcgctccatcaaggactccctcctcgcgctcgacaccaagaccggcgccaaggccctc 225 || |||||||||||||| ||||||||||| |||||||||| ||||||||||||||| || Sbjct: 321 gtccgctccatcaaggagtccctcctcgccctcgacaccaggaccggcgccaaggctctt 380 Query: 226 gaagatgttgagaaaaacatatttacattgagacagacactttctggtgatggagaagtt 285 ||||||||||||||||| ||| ||| ||||| |||||||||||||| |||||||||||| Sbjct: 381 gaagatgttgagaaaaatgtatctactttgaggcagacactttctggcgatggagaagtt 440 Query: 286 gaaccgaaccaggatcatgtcttacagatagcccttgaaatttgcaaggagggtgtcctt 345 ||||| || ||||| || || |||||||||||||||||||||||||||||| ||||||| Sbjct: 441 gaaccaaatcaggaacaggttctacagatagcccttgaaatttgcaaggaggatgtcctt 500 Query: 346 tctctttttgttcagaacctgccttcgttgggttgggagggtagaaaggatcttgcccac 405 || || ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 501 tcgctctttgttcagaatatgccttccttgggttgggagggtagaaaggaccttgcccac 560 Query: 406 tgctggtgcattttgttgaggcagaaggttgatgaaagtcactgctgcgtgcagtatatc 465 |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 561 tgctggagcattttgttgaggcagaaggttgatgaagcctattgctgcgtgcagtatatt 620 Query: 466 gaaaatcatgttgatcttctagatttccttgttgtatgctacaagaacttggaagtcgca 525 ||||||||| |||||||||||||||||||||| || |||||||||||||||||||| ||| Sbjct: 621 gaaaatcattttgatcttctagatttccttgtagtttgctacaagaacttggaagttgca 680 Query: 526 ttgaactgtggaaacatgttgcgagaatgcattaaatatccttcacttgcaaaatatata 585 ||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 681 ttgaactgtgggaatatgttgcgagaatgcataaaatatcctacacttgcaaaatatata 740 Query: 586 ttggagtcaaatagcttcgagttgtttttccagtatgttgaattgccaaactttgatatt 645 |||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 741 ttggagtcaagtagcttcgagttgtttttccagtatgttgaattatcgaactttgatatt 800 Query: 646 gcttctgatgctctgaataccttcaaggatttgctcactaaacatgaagatgcggtctcc 705 ||||||||||||||||| |||||||||||||||||||| |||||||||| || || || Sbjct: 801 gcttctgatgctctgaacaccttcaaggatttgctcaccaaacatgaagccgcagtttct 860 Query: 706 gagtttctcatttcccattatgaacagttctttgaactctacaaaaggcttttaacttct 765 |||||||| ||||||||||||||||||||||| ||||||| ||| ||| ||||||| Sbjct: 861 gagtttctgtgctcccattatgaacagttctttgagctctacacaagacttctaacttca 920 Query: 766 gataattatgtgacaagaagacaatcagtgaagtttctttcagagtttctgttggaggcc 825 ||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 921 actaattatgttacaagaagacaatcagtgaagtttctttcagagtttttgttagaggcc 980 Query: 826 ccaaatgctcagataatgaagcggtatattttggaagttcgttacttgaacattatgatg 885 ||||||||||| |||||||||||||| ||| ||||||| |||| || || || ||||| Sbjct: 981 ccaaatgctcaaataatgaagcggtacattgtggaagtcagttatttaaatatcatgatt 1040 Query: 886 ggtctactaaaggattcaagcaaaaatatcaggatatgttcctttcacatttttaaggta 945 || || || |||||| ||||||||||||||||||||||| |||| |||||||| |||||| Sbjct: 1041 ggcctgctgaaggatacaagcaaaaatatcaggatatgtgccttccacattttcaaggta 1100 Query: 946 tttgttgccaacccaaacaaacctcgtgatattattcaagttttggtagacaaccacaaa 1005 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| | Sbjct: 1101 tttgttgccaatccaaacaagcctcgtgatattattcaagttttggtagacaatcacaga 1160 Query: 1006 gaattattgaagttactccatgctcttcctgcaagcaaaggtgaagatgaccaacttgag 1065 ||| | |||||| |||| |||||| |||||||||||||||| || |||||||| Sbjct: 1161 gaactgttgaagctactaggcaatcttcccacaagcaaaggtgaagacgagcaacttgaa 1220 Query: 1066 gaggagcgagacttgattatcaaggaaattgagaagcttgtgcgcttgtcagtatagacc 1125 |||||| |||| || || ||||||||||| ||||||||||||| | || ||||||||| Sbjct: 1221 gaggagagagatttaatcatcaaggaaatcgagaagcttgtgcattcatcggtatagacc 1280 Query: 1126 ctcaagaaattc 1137 |||||||||||| Sbjct: 1281 ctcaagaaattc 1292
>ref|NM_001056687.1| Oryza sativa (japonica cultivar-group) Os03g0359700 (Os03g0359700) mRNA, complete cds Length = 1289 Score = 468 bits (236), Expect = e-128 Identities = 664/804 (82%), Gaps = 2/804 (0%) Strand = Plus / Plus Query: 169 cgctccatcaaggactccctcctcgcgctcgacaccaagaccggcgccaaggccctcgaa 228 |||||||||||||||||| ||| || ||| ||||||||| |||||||| ||| || ||| Sbjct: 144 cgctccatcaaggactccttccaggccctccacaccaagaacggcgccagggctctagaa 203 Query: 229 gatgttgagaaaaacatatttacattgagacagacactttctggtgatggagaagttgaa 288 || |||||||||||| | | ||||||| || | || |||||||||||||||| ||| Sbjct: 204 gaggttgagaaaaacctctcgtcattgaggcaaatgctgtctggtgatggagaagcagaa 263 Query: 289 ccgaaccaggatcatgtcttacagatagcccttgaaatttgcaaggagggtgtcctttct 348 || || || || || ||||| || ||| ||||||| ||||||||||||| ||||||||| Sbjct: 264 ccaaatcaagaacaagtcttgcaaataacccttgagatttgcaaggaggatgtcctttcc 323 Query: 349 ctttttgttcagaacctgccttcgttgggttgggagggta-gaaaggatcttgcccactg 407 || ||||||||||| ||||||||| | ||||||| | ||| |||| ||||| | ||||| Sbjct: 324 ctctttgttcagaatctgccttcgcttggttggg-gagtacgaaaagatctggttcactg 382 Query: 408 ctggtgcattttgttgaggcagaaggttgatgaaagtcactgctgcgtgcagtatatcga 467 ||||||||||||| | ||||||||| ||||||| || ||||||| ||| |||| || || Sbjct: 383 ctggtgcattttgctcaggcagaagtttgatgagagctactgctgtgtgaagtacattga 442 Query: 468 aaatcatgttgatcttctagatttccttgttgtatgctacaagaacttggaagtcgcatt 527 || ||| | || ||| |||||||||| |||| ||||||||||||||||| || ||| | Sbjct: 443 gaaccatctggagcttttagatttcctagttggctgctacaagaacttggacgttgcact 502 Query: 528 gaactgtggaaacatgttgcgagaatgcattaaatatccttcacttgcaaaatatatatt 587 ||| || || ||||||||| |||||||||| ||||| || ||||| ||||||| ||||| Sbjct: 503 gaattgcgggaacatgttgagagaatgcataaaatacccaacacttacaaaatacatatt 562 Query: 588 ggagtcaaatagcttcgagttgtttttccagtatgttgaattgccaaactttgatattgc 647 ||| || | ||||||||| ||||||| ||||||| || |||||||||| |||||||| Sbjct: 563 ggattccagtagcttcgaactgttttttgagtatgtggagctgccaaacttcgatattgc 622 Query: 648 ttctgatgctctgaataccttcaaggatttgctcactaaacatgaagatgcggtctccga 707 ||||||||||||||| |||||||||||| |||| || ||||||||| | || | || Sbjct: 623 ttctgatgctctgaacaccttcaaggatctgcttaccaaacatgaaacagttgttgctga 682 Query: 708 gtttctcatttcccattatgaacagttctttgaactctacaaaaggcttttaacttctga 767 ||| | | |||||| || || ||||||||||||||||||| |||||| ||||| || Sbjct: 683 gttcttgagttcccactacgagcagttctttgaactctacacaaggctcttaacatcacc 742 Query: 768 taattatgtgacaagaagacaatcagtgaagtttctttcagagtttctgttggaggcccc 827 ||||||||| ||||||||||||||||||||||| ||||| || |||||||||||||| || Sbjct: 743 taattatgtaacaagaagacaatcagtgaagttcctttcggaatttctgttggaggctcc 802 Query: 828 aaatgctcagataatgaagcggtatattttggaagttcgttacttgaacattatgatggg 887 ||| |||| ||||||||||| |||||| ||||||||||| ||| || |||||||| Sbjct: 803 aaacgctcgaataatgaagcgttatattacggaagttcgtttcttaaatattatgattac 862 Query: 888 tctactaaaggattcaagcaaaaatatcaggatatgttcctttcacatttttaaggtatt 947 |||||| ||||||||||||||||||||||| ||||| |||| || |||||||||| || Sbjct: 863 tctactgaaggattcaagcaaaaatatcagaatatgcgccttccatgtttttaaggtttt 922 Query: 948 tgttgccaacccaaacaaacctcg 971 ||||||||| || ||||| ||||| Sbjct: 923 tgttgccaatccgaacaagcctcg 946
>dbj|AK060778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-C03, full insert sequence Length = 1289 Score = 468 bits (236), Expect = e-128 Identities = 664/804 (82%), Gaps = 2/804 (0%) Strand = Plus / Plus Query: 169 cgctccatcaaggactccctcctcgcgctcgacaccaagaccggcgccaaggccctcgaa 228 |||||||||||||||||| ||| || ||| ||||||||| |||||||| ||| || ||| Sbjct: 144 cgctccatcaaggactccttccaggccctccacaccaagaacggcgccagggctctagaa 203 Query: 229 gatgttgagaaaaacatatttacattgagacagacactttctggtgatggagaagttgaa 288 || |||||||||||| | | ||||||| || | || |||||||||||||||| ||| Sbjct: 204 gaggttgagaaaaacctctcgtcattgaggcaaatgctgtctggtgatggagaagcagaa 263 Query: 289 ccgaaccaggatcatgtcttacagatagcccttgaaatttgcaaggagggtgtcctttct 348 || || || || || ||||| || ||| ||||||| ||||||||||||| ||||||||| Sbjct: 264 ccaaatcaagaacaagtcttgcaaataacccttgagatttgcaaggaggatgtcctttcc 323 Query: 349 ctttttgttcagaacctgccttcgttgggttgggagggta-gaaaggatcttgcccactg 407 || ||||||||||| ||||||||| | ||||||| | ||| |||| ||||| | ||||| Sbjct: 324 ctctttgttcagaatctgccttcgcttggttggg-gagtacgaaaagatctggttcactg 382 Query: 408 ctggtgcattttgttgaggcagaaggttgatgaaagtcactgctgcgtgcagtatatcga 467 ||||||||||||| | ||||||||| ||||||| || ||||||| ||| |||| || || Sbjct: 383 ctggtgcattttgctcaggcagaagtttgatgagagctactgctgtgtgaagtacattga 442 Query: 468 aaatcatgttgatcttctagatttccttgttgtatgctacaagaacttggaagtcgcatt 527 || ||| | || ||| |||||||||| |||| ||||||||||||||||| || ||| | Sbjct: 443 gaaccatctggagcttttagatttcctagttggctgctacaagaacttggacgttgcact 502 Query: 528 gaactgtggaaacatgttgcgagaatgcattaaatatccttcacttgcaaaatatatatt 587 ||| || || ||||||||| |||||||||| ||||| || ||||| ||||||| ||||| Sbjct: 503 gaattgcgggaacatgttgagagaatgcataaaatacccaacacttacaaaatacatatt 562 Query: 588 ggagtcaaatagcttcgagttgtttttccagtatgttgaattgccaaactttgatattgc 647 ||| || | ||||||||| ||||||| ||||||| || |||||||||| |||||||| Sbjct: 563 ggattccagtagcttcgaactgttttttgagtatgtggagctgccaaacttcgatattgc 622 Query: 648 ttctgatgctctgaataccttcaaggatttgctcactaaacatgaagatgcggtctccga 707 ||||||||||||||| |||||||||||| |||| || ||||||||| | || | || Sbjct: 623 ttctgatgctctgaacaccttcaaggatctgcttaccaaacatgaaacagttgttgctga 682 Query: 708 gtttctcatttcccattatgaacagttctttgaactctacaaaaggcttttaacttctga 767 ||| | | |||||| || || ||||||||||||||||||| |||||| ||||| || Sbjct: 683 gttcttgagttcccactacgagcagttctttgaactctacacaaggctcttaacatcacc 742 Query: 768 taattatgtgacaagaagacaatcagtgaagtttctttcagagtttctgttggaggcccc 827 ||||||||| ||||||||||||||||||||||| ||||| || |||||||||||||| || Sbjct: 743 taattatgtaacaagaagacaatcagtgaagttcctttcggaatttctgttggaggctcc 802 Query: 828 aaatgctcagataatgaagcggtatattttggaagttcgttacttgaacattatgatggg 887 ||| |||| ||||||||||| |||||| ||||||||||| ||| || |||||||| Sbjct: 803 aaacgctcgaataatgaagcgttatattacggaagttcgtttcttaaatattatgattac 862 Query: 888 tctactaaaggattcaagcaaaaatatcaggatatgttcctttcacatttttaaggtatt 947 |||||| ||||||||||||||||||||||| ||||| |||| || |||||||||| || Sbjct: 863 tctactgaaggattcaagcaaaaatatcagaatatgcgccttccatgtttttaaggtttt 922 Query: 948 tgttgccaacccaaacaaacctcg 971 ||||||||| || ||||| ||||| Sbjct: 923 tgttgccaatccgaacaagcctcg 946
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 174 bits (88), Expect = 5e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 226 gaagatgttgagaaaaacatatttacattgagacagacactttctggtgatggagaagtt 285 ||||||||||||||||| ||| ||| ||||| |||||||||||||| |||||||||||| Sbjct: 26961916 gaagatgttgagaaaaatgtatctactttgaggcagacactttctggcgatggagaagtt 26961975 Query: 286 gaaccgaaccaggatcatgtcttacagatagcccttgaaatttgcaaggagggtgtcctt 345 ||||| || ||||| || || |||||||||||||||||||||||||||||| ||||||| Sbjct: 26961976 gaaccaaatcaggaacaggttctacagatagcccttgaaatttgcaaggaggatgtcctt 26962035 Query: 346 tctctttttgttcagaacctgccttcgttgggttgggagg 385 || || ||||||||||| ||||||| ||||||||||||| Sbjct: 26962036 tcgctctttgttcagaatatgccttccttgggttgggagg 26962075 Score = 157 bits (79), Expect = 1e-34 Identities = 106/115 (92%) Strand = Plus / Plus Query: 383 agggtagaaaggatcttgcccactgctggtgcattttgttgaggcagaaggttgatgaaa 442 ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 26962151 agggtagaaaggaccttgcccactgctggagcattttgttgaggcagaaggttgatgaag 26962210 Query: 443 gtcactgctgcgtgcagtatatcgaaaatcatgttgatcttctagatttccttgt 497 | ||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 26962211 cctattgctgcgtgcagtatattgaaaatcattttgatcttctagatttccttgt 26962265 Score = 149 bits (75), Expect = 3e-32 Identities = 90/95 (94%) Strand = Plus / Plus Query: 579 atatatattggagtcaaatagcttcgagttgtttttccagtatgttgaattgccaaactt 638 ||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||| Sbjct: 26963063 atatatattggagtcaagtagcttcgagttgtttttccagtatgttgaattatcgaactt 26963122 Query: 639 tgatattgcttctgatgctctgaataccttcaagg 673 |||||||||||||||||||||||| |||||||||| Sbjct: 26963123 tgatattgcttctgatgctctgaacaccttcaagg 26963157 Score = 129 bits (65), Expect = 3e-26 Identities = 103/115 (89%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 109 gagatgtccttcttcttccgggcggcgtcgcggccg---cgttcgtcccagcaggacctc 165 |||||||||||||||||||||||||||||||||||| || |||| | |||||| ||| Sbjct: 26960873 gagatgtccttcttcttccgggcggcgtcgcggccggcgcgcccgtcgccgcaggagctc 26960932 Query: 166 gtgcgctccatcaaggactccctcctcgcgctcgacaccaagaccggcgccaagg 220 || |||||||||||||| ||||||||||| |||||||||| |||||||||||||| Sbjct: 26960933 gtccgctccatcaaggagtccctcctcgccctcgacaccaggaccggcgccaagg 26960987 Score = 111 bits (56), Expect = 7e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 503 gctacaagaacttggaagtcgcattgaactgtggaaacatgttgcgagaatgcattaaat 562 ||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 26962558 gctacaagaacttggaagttgcattgaactgtgggaatatgttgcgagaatgcataaaat 26962617 Query: 563 atccttcacttgcaaa 578 ||||| |||||||||| Sbjct: 26962618 atcctacacttgcaaa 26962633 Score = 107 bits (54), Expect = 1e-19 Identities = 75/82 (91%) Strand = Plus / Plus Query: 941 aggtatttgttgccaacccaaacaaacctcgtgatattattcaagttttggtagacaacc 1000 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct: 26964771 aggtatttgttgccaatccaaacaagcctcgtgatattattcaagttttggtagacaatc 26964830 Query: 1001 acaaagaattattgaagttact 1022 ||| |||| | |||||| |||| Sbjct: 26964831 acagagaactgttgaagctact 26964852 Score = 93.7 bits (47), Expect = 2e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 797 agtttctttcagagtttctgttggaggccccaaatgctcagataatgaagcggtatattt 856 ||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 26963620 agtttctttcagagtttttgttagaggccccaaatgctcaaataatgaagcggtacattg 26963679 Query: 857 tggaagt 863 ||||||| Sbjct: 26963680 tggaagt 26963686 Score = 83.8 bits (42), Expect = 2e-12 Identities = 81/94 (86%) Strand = Plus / Plus Query: 1044 aggtgaagatgaccaacttgaggaggagcgagacttgattatcaaggaaattgagaagct 1103 ||||||||| || |||||||| |||||| |||| || || ||||||||||| |||||||| Sbjct: 26965031 aggtgaagacgagcaacttgaagaggagagagatttaatcatcaaggaaatcgagaagct 26965090 Query: 1104 tgtgcgcttgtcagtatagaccctcaagaaattc 1137 ||||| | || ||||||||||||||||||||| Sbjct: 26965091 tgtgcattcatcggtatagaccctcaagaaattc 26965124 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 730 cagttctttgaactctacaaaaggcttttaacttctgataattatgtgacaagaagacaa 789 ||||||||||| ||||||| ||| ||| ||||||| ||||||||| |||||||||||| Sbjct: 26963471 cagttctttgagctctacacaagacttctaacttcaactaattatgttacaagaagacaa 26963530 Query: 790 tcagtgaag 798 ||||||||| Sbjct: 26963531 tcagtgaag 26963539 Score = 67.9 bits (34), Expect = 9e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 896 aggattcaagcaaaaatatcaggatatgttcctttcacatttttaaggta 945 ||||| ||||||||||||||||||||||| |||| |||||||| |||||| Sbjct: 26964290 aggatacaagcaaaaatatcaggatatgtgccttccacattttcaaggta 26964339 Score = 44.1 bits (22), Expect = 1.3 Identities = 52/62 (83%) Strand = Plus / Plus Query: 671 aggatttgctcactaaacatgaagatgcggtctccgagtttctcatttcccattatgaac 730 ||||||||||||| |||||||||| || || || |||||||| ||||||||||||| Sbjct: 26963237 aggatttgctcaccaaacatgaagccgcagtttctgagtttctgtgctcccattatgaac 26963296 Query: 731 ag 732 || Sbjct: 26963297 ag 26963298
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 174 bits (88), Expect = 5e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 226 gaagatgttgagaaaaacatatttacattgagacagacactttctggtgatggagaagtt 285 ||||||||||||||||| ||| ||| ||||| |||||||||||||| |||||||||||| Sbjct: 26394 gaagatgttgagaaaaatgtatctactttgaggcagacactttctggcgatggagaagtt 26453 Query: 286 gaaccgaaccaggatcatgtcttacagatagcccttgaaatttgcaaggagggtgtcctt 345 ||||| || ||||| || || |||||||||||||||||||||||||||||| ||||||| Sbjct: 26454 gaaccaaatcaggaacaggttctacagatagcccttgaaatttgcaaggaggatgtcctt 26513 Query: 346 tctctttttgttcagaacctgccttcgttgggttgggagg 385 || || ||||||||||| ||||||| ||||||||||||| Sbjct: 26514 tcgctctttgttcagaatatgccttccttgggttgggagg 26553 Score = 157 bits (79), Expect = 1e-34 Identities = 106/115 (92%) Strand = Plus / Plus Query: 383 agggtagaaaggatcttgcccactgctggtgcattttgttgaggcagaaggttgatgaaa 442 ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 26629 agggtagaaaggaccttgcccactgctggagcattttgttgaggcagaaggttgatgaag 26688 Query: 443 gtcactgctgcgtgcagtatatcgaaaatcatgttgatcttctagatttccttgt 497 | ||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 26689 cctattgctgcgtgcagtatattgaaaatcattttgatcttctagatttccttgt 26743 Score = 149 bits (75), Expect = 3e-32 Identities = 90/95 (94%) Strand = Plus / Plus Query: 579 atatatattggagtcaaatagcttcgagttgtttttccagtatgttgaattgccaaactt 638 ||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||| Sbjct: 27541 atatatattggagtcaagtagcttcgagttgtttttccagtatgttgaattatcgaactt 27600 Query: 639 tgatattgcttctgatgctctgaataccttcaagg 673 |||||||||||||||||||||||| |||||||||| Sbjct: 27601 tgatattgcttctgatgctctgaacaccttcaagg 27635 Score = 129 bits (65), Expect = 3e-26 Identities = 103/115 (89%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 109 gagatgtccttcttcttccgggcggcgtcgcggccg---cgttcgtcccagcaggacctc 165 |||||||||||||||||||||||||||||||||||| || |||| | |||||| ||| Sbjct: 25351 gagatgtccttcttcttccgggcggcgtcgcggccggcgcgcccgtcgccgcaggagctc 25410 Query: 166 gtgcgctccatcaaggactccctcctcgcgctcgacaccaagaccggcgccaagg 220 || |||||||||||||| ||||||||||| |||||||||| |||||||||||||| Sbjct: 25411 gtccgctccatcaaggagtccctcctcgccctcgacaccaggaccggcgccaagg 25465 Score = 111 bits (56), Expect = 7e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 503 gctacaagaacttggaagtcgcattgaactgtggaaacatgttgcgagaatgcattaaat 562 ||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 27036 gctacaagaacttggaagttgcattgaactgtgggaatatgttgcgagaatgcataaaat 27095 Query: 563 atccttcacttgcaaa 578 ||||| |||||||||| Sbjct: 27096 atcctacacttgcaaa 27111 Score = 107 bits (54), Expect = 1e-19 Identities = 75/82 (91%) Strand = Plus / Plus Query: 941 aggtatttgttgccaacccaaacaaacctcgtgatattattcaagttttggtagacaacc 1000 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct: 29249 aggtatttgttgccaatccaaacaagcctcgtgatattattcaagttttggtagacaatc 29308 Query: 1001 acaaagaattattgaagttact 1022 ||| |||| | |||||| |||| Sbjct: 29309 acagagaactgttgaagctact 29330 Score = 93.7 bits (47), Expect = 2e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 797 agtttctttcagagtttctgttggaggccccaaatgctcagataatgaagcggtatattt 856 ||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 28098 agtttctttcagagtttttgttagaggccccaaatgctcaaataatgaagcggtacattg 28157 Query: 857 tggaagt 863 ||||||| Sbjct: 28158 tggaagt 28164 Score = 83.8 bits (42), Expect = 2e-12 Identities = 81/94 (86%) Strand = Plus / Plus Query: 1044 aggtgaagatgaccaacttgaggaggagcgagacttgattatcaaggaaattgagaagct 1103 ||||||||| || |||||||| |||||| |||| || || ||||||||||| |||||||| Sbjct: 29509 aggtgaagacgagcaacttgaagaggagagagatttaatcatcaaggaaatcgagaagct 29568 Query: 1104 tgtgcgcttgtcagtatagaccctcaagaaattc 1137 ||||| | || ||||||||||||||||||||| Sbjct: 29569 tgtgcattcatcggtatagaccctcaagaaattc 29602 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 730 cagttctttgaactctacaaaaggcttttaacttctgataattatgtgacaagaagacaa 789 ||||||||||| ||||||| ||| ||| ||||||| ||||||||| |||||||||||| Sbjct: 27949 cagttctttgagctctacacaagacttctaacttcaactaattatgttacaagaagacaa 28008 Query: 790 tcagtgaag 798 ||||||||| Sbjct: 28009 tcagtgaag 28017 Score = 67.9 bits (34), Expect = 9e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 896 aggattcaagcaaaaatatcaggatatgttcctttcacatttttaaggta 945 ||||| ||||||||||||||||||||||| |||| |||||||| |||||| Sbjct: 28768 aggatacaagcaaaaatatcaggatatgtgccttccacattttcaaggta 28817 Score = 44.1 bits (22), Expect = 1.3 Identities = 52/62 (83%) Strand = Plus / Plus Query: 671 aggatttgctcactaaacatgaagatgcggtctccgagtttctcatttcccattatgaac 730 ||||||||||||| |||||||||| || || || |||||||| ||||||||||||| Sbjct: 27715 aggatttgctcaccaaacatgaagccgcagtttctgagtttctgtgctcccattatgaac 27774 Query: 731 ag 732 || Sbjct: 27775 ag 27776
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 174 bits (88), Expect = 5e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 226 gaagatgttgagaaaaacatatttacattgagacagacactttctggtgatggagaagtt 285 ||||||||||||||||| ||| ||| ||||| |||||||||||||| |||||||||||| Sbjct: 110507 gaagatgttgagaaaaatgtatctactttgaggcagacactttctggcgatggagaagtt 110566 Query: 286 gaaccgaaccaggatcatgtcttacagatagcccttgaaatttgcaaggagggtgtcctt 345 ||||| || ||||| || || |||||||||||||||||||||||||||||| ||||||| Sbjct: 110567 gaaccaaatcaggaacaggttctacagatagcccttgaaatttgcaaggaggatgtcctt 110626 Query: 346 tctctttttgttcagaacctgccttcgttgggttgggagg 385 || || ||||||||||| ||||||| ||||||||||||| Sbjct: 110627 tcgctctttgttcagaatatgccttccttgggttgggagg 110666 Score = 157 bits (79), Expect = 1e-34 Identities = 106/115 (92%) Strand = Plus / Plus Query: 383 agggtagaaaggatcttgcccactgctggtgcattttgttgaggcagaaggttgatgaaa 442 ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110742 agggtagaaaggaccttgcccactgctggagcattttgttgaggcagaaggttgatgaag 110801 Query: 443 gtcactgctgcgtgcagtatatcgaaaatcatgttgatcttctagatttccttgt 497 | ||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 110802 cctattgctgcgtgcagtatattgaaaatcattttgatcttctagatttccttgt 110856 Score = 149 bits (75), Expect = 3e-32 Identities = 90/95 (94%) Strand = Plus / Plus Query: 579 atatatattggagtcaaatagcttcgagttgtttttccagtatgttgaattgccaaactt 638 ||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||| Sbjct: 111654 atatatattggagtcaagtagcttcgagttgtttttccagtatgttgaattatcgaactt 111713 Query: 639 tgatattgcttctgatgctctgaataccttcaagg 673 |||||||||||||||||||||||| |||||||||| Sbjct: 111714 tgatattgcttctgatgctctgaacaccttcaagg 111748 Score = 129 bits (65), Expect = 3e-26 Identities = 103/115 (89%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 109 gagatgtccttcttcttccgggcggcgtcgcggccg---cgttcgtcccagcaggacctc 165 |||||||||||||||||||||||||||||||||||| || |||| | |||||| ||| Sbjct: 109464 gagatgtccttcttcttccgggcggcgtcgcggccggcgcgcccgtcgccgcaggagctc 109523 Query: 166 gtgcgctccatcaaggactccctcctcgcgctcgacaccaagaccggcgccaagg 220 || |||||||||||||| ||||||||||| |||||||||| |||||||||||||| Sbjct: 109524 gtccgctccatcaaggagtccctcctcgccctcgacaccaggaccggcgccaagg 109578 Score = 111 bits (56), Expect = 7e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 503 gctacaagaacttggaagtcgcattgaactgtggaaacatgttgcgagaatgcattaaat 562 ||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||| Sbjct: 111149 gctacaagaacttggaagttgcattgaactgtgggaatatgttgcgagaatgcataaaat 111208 Query: 563 atccttcacttgcaaa 578 ||||| |||||||||| Sbjct: 111209 atcctacacttgcaaa 111224 Score = 107 bits (54), Expect = 1e-19 Identities = 75/82 (91%) Strand = Plus / Plus Query: 941 aggtatttgttgccaacccaaacaaacctcgtgatattattcaagttttggtagacaacc 1000 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct: 113362 aggtatttgttgccaatccaaacaagcctcgtgatattattcaagttttggtagacaatc 113421 Query: 1001 acaaagaattattgaagttact 1022 ||| |||| | |||||| |||| Sbjct: 113422 acagagaactgttgaagctact 113443 Score = 93.7 bits (47), Expect = 2e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 797 agtttctttcagagtttctgttggaggccccaaatgctcagataatgaagcggtatattt 856 ||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 112211 agtttctttcagagtttttgttagaggccccaaatgctcaaataatgaagcggtacattg 112270 Query: 857 tggaagt 863 ||||||| Sbjct: 112271 tggaagt 112277 Score = 83.8 bits (42), Expect = 2e-12 Identities = 81/94 (86%) Strand = Plus / Plus Query: 1044 aggtgaagatgaccaacttgaggaggagcgagacttgattatcaaggaaattgagaagct 1103 ||||||||| || |||||||| |||||| |||| || || ||||||||||| |||||||| Sbjct: 113622 aggtgaagacgagcaacttgaagaggagagagatttaatcatcaaggaaatcgagaagct 113681 Query: 1104 tgtgcgcttgtcagtatagaccctcaagaaattc 1137 ||||| | || ||||||||||||||||||||| Sbjct: 113682 tgtgcattcatcggtatagaccctcaagaaattc 113715 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 730 cagttctttgaactctacaaaaggcttttaacttctgataattatgtgacaagaagacaa 789 ||||||||||| ||||||| ||| ||| ||||||| ||||||||| |||||||||||| Sbjct: 112062 cagttctttgagctctacacaagacttctaacttcaactaattatgttacaagaagacaa 112121 Query: 790 tcagtgaag 798 ||||||||| Sbjct: 112122 tcagtgaag 112130 Score = 67.9 bits (34), Expect = 9e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 896 aggattcaagcaaaaatatcaggatatgttcctttcacatttttaaggta 945 ||||| ||||||||||||||||||||||| |||| |||||||| |||||| Sbjct: 112881 aggatacaagcaaaaatatcaggatatgtgccttccacattttcaaggta 112930 Score = 44.1 bits (22), Expect = 1.3 Identities = 52/62 (83%) Strand = Plus / Plus Query: 671 aggatttgctcactaaacatgaagatgcggtctccgagtttctcatttcccattatgaac 730 ||||||||||||| |||||||||| || || || |||||||| ||||||||||||| Sbjct: 111828 aggatttgctcaccaaacatgaagccgcagtttctgagtttctgtgctcccattatgaac 111887 Query: 731 ag 732 || Sbjct: 111888 ag 111889
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 93.7 bits (47), Expect = 2e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 268 tctggtgatggagaagttgaaccgaaccaggatcatgtcttacagatagcccttgaaatt 327 |||||||||||||||| ||||| || || || || ||||| || ||| ||||||| ||| Sbjct: 13809084 tctggtgatggagaagcagaaccaaatcaagaacaagtcttgcaaataacccttgagatt 13809143 Query: 328 tgcaaggagggtgtcctttctctttttgttcagaacctgccttcgttgggttggg 382 |||||||||| ||||||||| || ||||||||||| ||||||||| | ||||||| Sbjct: 13809144 tgcaaggaggatgtcctttccctctttgttcagaatctgccttcgcttggttggg 13809198 Score = 85.7 bits (43), Expect = 4e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 583 atattggagtcaaatagcttcgagttgtttttccagtatgttgaattgccaaactttgat 642 |||||||| || | ||||||||| ||||||| ||||||| || |||||||||| ||| Sbjct: 13812720 atattggattccagtagcttcgaactgttttttgagtatgtggagctgccaaacttcgat 13812779 Query: 643 attgcttctgatgctctgaataccttcaagg 673 |||||||||||||||||||| |||||||||| Sbjct: 13812780 attgcttctgatgctctgaacaccttcaagg 13812810 Score = 83.8 bits (42), Expect = 2e-12 Identities = 63/70 (90%) Strand = Plus / Plus Query: 729 acagttctttgaactctacaaaaggcttttaacttctgataattatgtgacaagaagaca 788 |||||||||||||||||||| |||||| ||||| || ||||||||| ||||||||||| Sbjct: 13813220 acagttctttgaactctacacaaggctcttaacatcacctaattatgtaacaagaagaca 13813279 Query: 789 atcagtgaag 798 |||||||||| Sbjct: 13813280 atcagtgaag 13813289 Score = 71.9 bits (36), Expect = 6e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 797 agtttctttcagagtttctgttggaggccccaaatgctcagataatgaagcggtatattt 856 |||| ||||| || |||||||||||||| ||||| |||| ||||||||||| |||||| Sbjct: 13813362 agttcctttcggaatttctgttggaggctccaaacgctcgaataatgaagcgttatatta 13813421 Query: 857 tggaagttcgttacttgaacattatgat 884 ||||||||||| ||| || |||||||| Sbjct: 13813422 cggaagttcgtttcttaaatattatgat 13813449 Score = 58.0 bits (29), Expect = 9e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 403 cactgctggtgcattttgttgaggcagaaggttgatgaaagtcactgctgcgtgcagtat 462 |||||||||||||||||| | ||||||||| ||||||| || ||||||| ||| |||| Sbjct: 13809297 cactgctggtgcattttgctcaggcagaagtttgatgagagctactgctgtgtgaagtac 13809356 Query: 463 atcgaaaatcatgttgatcttctagatttccttgttg 499 || || || ||| | || ||| |||||||||| |||| Sbjct: 13809357 attgagaaccatctggagcttttagatttcctagttg 13809393 Score = 58.0 bits (29), Expect = 9e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 503 gctacaagaacttggaagtcgcattgaactgtggaaacatgttgcgagaatgcattaaat 562 |||||||||||||||| || ||| |||| || || ||||||||| |||||||||| |||| Sbjct: 13809695 gctacaagaacttggacgttgcactgaattgcgggaacatgttgagagaatgcataaaat 13809754 Query: 563 a 563 | Sbjct: 13809755 a 13809755 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 896 aggattcaagcaaaaatatcaggatatgttcctttcacatttttaaggtatt 947 |||||||||||||||||||||| ||||| |||| || ||||||||||||| Sbjct: 13813798 aggattcaagcaaaaatatcagaatatgcgccttccatgtttttaaggtatt 13813849 Score = 50.1 bits (25), Expect = 0.022 Identities = 43/49 (87%) Strand = Plus / Plus Query: 169 cgctccatcaaggactccctcctcgcgctcgacaccaagaccggcgcca 217 |||||||||||||||||| ||| || ||| ||||||||| |||||||| Sbjct: 13808334 cgctccatcaaggactccttccaggccctccacaccaagaacggcgcca 13808382
>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048D11, from chromosome 3, complete sequence Length = 158911 Score = 93.7 bits (47), Expect = 2e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 268 tctggtgatggagaagttgaaccgaaccaggatcatgtcttacagatagcccttgaaatt 327 |||||||||||||||| ||||| || || || || ||||| || ||| ||||||| ||| Sbjct: 90637 tctggtgatggagaagcagaaccaaatcaagaacaagtcttgcaaataacccttgagatt 90696 Query: 328 tgcaaggagggtgtcctttctctttttgttcagaacctgccttcgttgggttggg 382 |||||||||| ||||||||| || ||||||||||| ||||||||| | ||||||| Sbjct: 90697 tgcaaggaggatgtcctttccctctttgttcagaatctgccttcgcttggttggg 90751 Score = 85.7 bits (43), Expect = 4e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 583 atattggagtcaaatagcttcgagttgtttttccagtatgttgaattgccaaactttgat 642 |||||||| || | ||||||||| ||||||| ||||||| || |||||||||| ||| Sbjct: 94273 atattggattccagtagcttcgaactgttttttgagtatgtggagctgccaaacttcgat 94332 Query: 643 attgcttctgatgctctgaataccttcaagg 673 |||||||||||||||||||| |||||||||| Sbjct: 94333 attgcttctgatgctctgaacaccttcaagg 94363 Score = 83.8 bits (42), Expect = 2e-12 Identities = 63/70 (90%) Strand = Plus / Plus Query: 729 acagttctttgaactctacaaaaggcttttaacttctgataattatgtgacaagaagaca 788 |||||||||||||||||||| |||||| ||||| || ||||||||| ||||||||||| Sbjct: 94773 acagttctttgaactctacacaaggctcttaacatcacctaattatgtaacaagaagaca 94832 Query: 789 atcagtgaag 798 |||||||||| Sbjct: 94833 atcagtgaag 94842 Score = 71.9 bits (36), Expect = 6e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 797 agtttctttcagagtttctgttggaggccccaaatgctcagataatgaagcggtatattt 856 |||| ||||| || |||||||||||||| ||||| |||| ||||||||||| |||||| Sbjct: 94915 agttcctttcggaatttctgttggaggctccaaacgctcgaataatgaagcgttatatta 94974 Query: 857 tggaagttcgttacttgaacattatgat 884 ||||||||||| ||| || |||||||| Sbjct: 94975 cggaagttcgtttcttaaatattatgat 95002 Score = 58.0 bits (29), Expect = 9e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 403 cactgctggtgcattttgttgaggcagaaggttgatgaaagtcactgctgcgtgcagtat 462 |||||||||||||||||| | ||||||||| ||||||| || ||||||| ||| |||| Sbjct: 90850 cactgctggtgcattttgctcaggcagaagtttgatgagagctactgctgtgtgaagtac 90909 Query: 463 atcgaaaatcatgttgatcttctagatttccttgttg 499 || || || ||| | || ||| |||||||||| |||| Sbjct: 90910 attgagaaccatctggagcttttagatttcctagttg 90946 Score = 58.0 bits (29), Expect = 9e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 503 gctacaagaacttggaagtcgcattgaactgtggaaacatgttgcgagaatgcattaaat 562 |||||||||||||||| || ||| |||| || || ||||||||| |||||||||| |||| Sbjct: 91248 gctacaagaacttggacgttgcactgaattgcgggaacatgttgagagaatgcataaaat 91307 Query: 563 a 563 | Sbjct: 91308 a 91308 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 896 aggattcaagcaaaaatatcaggatatgttcctttcacatttttaaggtatt 947 |||||||||||||||||||||| ||||| |||| || ||||||||||||| Sbjct: 95351 aggattcaagcaaaaatatcagaatatgcgccttccatgtttttaaggtatt 95402 Score = 50.1 bits (25), Expect = 0.022 Identities = 43/49 (87%) Strand = Plus / Plus Query: 169 cgctccatcaaggactccctcctcgcgctcgacaccaagaccggcgcca 217 |||||||||||||||||| ||| || ||| ||||||||| |||||||| Sbjct: 89887 cgctccatcaaggactccttccaggccctccacaccaagaacggcgcca 89935
>dbj|AK227838.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-40-O15 Length = 1485 Score = 60.0 bits (30), Expect = 2e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 769 aattatgtgacaagaagacaatcagtgaagtttctttcagagtttctgttggaggcccca 828 ||||||||||| |||||||||||| ||||| |||| || || || ||||||||| | ||| Sbjct: 859 aattatgtgacgagaagacaatcactgaagcttctctcggatttcctgttggagcctcca 918 Query: 829 aatgctcagataatgaag 846 ||| | || ||||||||| Sbjct: 919 aattcccacataatgaag 936 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 625 gaattgccaaactttgatattgcttctgatgc 656 |||||||||||||||||| ||||||||||||| Sbjct: 715 gaattgccaaactttgatgttgcttctgatgc 746
>ref|NM_121899.2| Arabidopsis thaliana unknown protein (AT5G18940) mRNA, complete cds Length = 1479 Score = 60.0 bits (30), Expect = 2e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 769 aattatgtgacaagaagacaatcagtgaagtttctttcagagtttctgttggaggcccca 828 ||||||||||| |||||||||||| ||||| |||| || || || ||||||||| | ||| Sbjct: 859 aattatgtgacgagaagacaatcactgaagcttctctcggatttcctgttggagcctcca 918 Query: 829 aatgctcagataatgaag 846 ||| | || ||||||||| Sbjct: 919 aattcccacataatgaag 936 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 625 gaattgccaaactttgatattgcttctgatgc 656 |||||||||||||||||| ||||||||||||| Sbjct: 715 gaattgccaaactttgatgttgcttctgatgc 746
>gb|BT012002.1| Arabidopsis thaliana At5g18940 mRNA sequence Length = 1029 Score = 60.0 bits (30), Expect = 2e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 769 aattatgtgacaagaagacaatcagtgaagtttctttcagagtttctgttggaggcccca 828 ||||||||||| |||||||||||| ||||| |||| || || || ||||||||| | ||| Sbjct: 670 aattatgtgacgagaagacaatcactgaagcttctctcggatttcctgttggagcctcca 729 Query: 829 aatgctcagataatgaag 846 ||| | || ||||||||| Sbjct: 730 aattcccacataatgaag 747 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 625 gaattgccaaactttgatattgcttctgatgc 656 |||||||||||||||||| ||||||||||||| Sbjct: 526 gaattgccaaactttgatgttgcttctgatgc 557
>gb|AY088359.1| Arabidopsis thaliana clone 6139 mRNA, complete sequence Length = 1474 Score = 60.0 bits (30), Expect = 2e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 769 aattatgtgacaagaagacaatcagtgaagtttctttcagagtttctgttggaggcccca 828 ||||||||||| |||||||||||| ||||| |||| || || || ||||||||| | ||| Sbjct: 856 aattatgtgacgagaagacaatcactgaagcttctctcggatttcctgttggagcctcca 915 Query: 829 aatgctcagataatgaag 846 ||| | || ||||||||| Sbjct: 916 aattcccacataatgaag 933 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 625 gaattgccaaactttgatattgcttctgatgc 656 |||||||||||||||||| ||||||||||||| Sbjct: 712 gaattgccaaactttgatgttgcttctgatgc 743
>emb|BX829534.1|CNS0A09C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZE06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1405 Score = 60.0 bits (30), Expect = 2e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 769 aattatgtgacaagaagacaatcagtgaagtttctttcagagtttctgttggaggcccca 828 ||||||||||| |||||||||||| ||||| |||| || || || ||||||||| | ||| Sbjct: 823 aattatgtgacgagaagacaatcactgaagcttctctcggatttcctgttggagcctcca 882 Query: 829 aatgctcagataatgaag 846 ||| | || ||||||||| Sbjct: 883 aattcccacataatgaag 900 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 625 gaattgccaaactttgatattgcttctgatgc 656 |||||||||||||||||| ||||||||||||| Sbjct: 679 gaattgccaaactttgatgttgcttctgatgc 710
>emb|BX833618.1|CNS09Z1H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZC02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1334 Score = 60.0 bits (30), Expect = 2e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 769 aattatgtgacaagaagacaatcagtgaagtttctttcagagtttctgttggaggcccca 828 ||||||||||| |||||||||||| ||||| |||| || || || ||||||||| | ||| Sbjct: 771 aattatgtgacgagaagacaatcactgaagcttctctcggatttcctgttggagcctcca 830 Query: 829 aatgctcagataatgaag 846 ||| | || ||||||||| Sbjct: 831 aattcccacataatgaag 848 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 625 gaattgccaaactttgatattgcttctgatgc 656 |||||||||||||||||| ||||||||||||| Sbjct: 627 gaattgccaaactttgatgttgcttctgatgc 658
>emb|CT033259.1| Platynereis dumerilii EST IB0AAA23DF02EM1 Length = 958 Score = 58.0 bits (29), Expect = 9e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 527 tgaactgtggaaacatgttgcgagaatgc 555 ||||||||||||||||||||||||||||| Sbjct: 499 tgaactgtggaaacatgttgcgagaatgc 527
>ref|NM_203078.1| Arabidopsis thaliana unknown protein (AT5G18940) mRNA, complete cds Length = 1413 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 625 gaattgccaaactttgatattgcttctgatgc 656 |||||||||||||||||| ||||||||||||| Sbjct: 715 gaattgccaaactttgatgttgcttctgatgc 746
>gb|AC068655.3|AC068655 Genomic Sequence For Arabidopsis thaliana Clone F17K4 From Chromosome V, complete sequence Length = 89453 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 625 gaattgccaaactttgatattgcttctgatgc 656 |||||||||||||||||| ||||||||||||| Sbjct: 9302 gaattgccaaactttgatgttgcttctgatgc 9271 Score = 46.1 bits (23), Expect = 0.34 Identities = 32/35 (91%) Strand = Plus / Minus Query: 769 aattatgtgacaagaagacaatcagtgaagtttct 803 ||||||||||| |||||||||||| ||||| |||| Sbjct: 8925 aattatgtgacgagaagacaatcactgaaggttct 8891
>emb|BX829741.1|CNS0A1YL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1247 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 625 gaattgccaaactttgatattgcttctgatgc 656 |||||||||||||||||| ||||||||||||| Sbjct: 689 gaattgccaaactttgattttgcttctgatgc 720
>emb|BX831054.1|CNS09ZCF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZG04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1375 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 625 gaattgccaaactttgatattgcttctgatgc 656 |||||||||||||||||| ||||||||||||| Sbjct: 758 gaattgccaaactttgatgttgcttctgatgc 789 Score = 46.1 bits (23), Expect = 0.34 Identities = 66/79 (83%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 769 aattatgtgacaagaagacaat-cagtgaagtttctttcagagtttctgttggaggcccc 827 ||||||||||| |||||||||| || ||||| |||| || || || ||||||||| | || Sbjct: 902 aattatgtgacgagaagacaatccactgaagcttctctcggatttcctgttggagcctcc 961 Query: 828 aaatgctcagataatgaag 846 |||| | || ||||||||| Sbjct: 962 aaattcccacataatgaag 980
>dbj|AK109309.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-F02, full insert sequence Length = 802 Score = 50.1 bits (25), Expect = 0.022 Identities = 43/49 (87%) Strand = Plus / Plus Query: 169 cgctccatcaaggactccctcctcgcgctcgacaccaagaccggcgcca 217 |||||||||||||||||| ||| || ||| ||||||||| |||||||| Sbjct: 140 cgctccatcaaggactccttccaggccctccacaccaagaacggcgcca 188
>emb|CT836477.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN077D02, full insert sequence Length = 728 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Minus Query: 96 ctccgccggcggcgagatgtccttcttc 123 |||| ||||||||||||||||||||||| Sbjct: 216 ctccaccggcggcgagatgtccttcttc 189
>dbj|AK241478.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065165M02, full insert sequence Length = 731 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Minus Query: 96 ctccgccggcggcgagatgtccttcttc 123 |||| ||||||||||||||||||||||| Sbjct: 218 ctccaccggcggcgagatgtccttcttc 191
>ref|NM_001062337.1| Oryza sativa (japonica cultivar-group) Os05g0468800 (Os05g0468800) mRNA, complete cds Length = 486 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Minus Query: 96 ctccgccggcggcgagatgtccttcttc 123 |||| ||||||||||||||||||||||| Sbjct: 120 ctccaccggcggcgagatgtccttcttc 93
>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01, complete sequence Length = 114236 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Plus Query: 96 ctccgccggcggcgagatgtccttcttc 123 |||| ||||||||||||||||||||||| Sbjct: 67688 ctccaccggcggcgagatgtccttcttc 67715
>gb|AC162030.8| Medicago truncatula clone mth2-178b21, complete sequence Length = 85986 Score = 48.1 bits (24), Expect = 0.085 Identities = 36/40 (90%) Strand = Plus / Plus Query: 829 aatgctcagataatgaagcggtatattttggaagttcgtt 868 |||||||||||||||||||| || || || |||||||||| Sbjct: 45023 aatgctcagataatgaagcgttacatcttagaagttcgtt 45062
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Plus Query: 96 ctccgccggcggcgagatgtccttcttc 123 |||| ||||||||||||||||||||||| Sbjct: 22868984 ctccaccggcggcgagatgtccttcttc 22869011
>emb|AL935118.8| Mouse DNA sequence from clone RP23-464I16 on chromosome 2, complete sequence Length = 83723 Score = 48.1 bits (24), Expect = 0.085 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1279 tttctcaagaacatgaagcattgc 1302 |||||||||||||||||||||||| Sbjct: 28656 tttctcaagaacatgaagcattgc 28679
>emb|AL162716.9| Human DNA sequence from clone RP11-339I24 on chromosome 13 Contains a meningioma expressed antigen 6 (coiled-coil proline-rich) (MGEA6) pseudogene, complete sequence Length = 122916 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 559 aaatatccttcacttgcaaaatatata 585 |||||||||||| |||||||||||||| Sbjct: 12795 aaatatccttcagttgcaaaatatata 12769
>gb|AC129951.9| Mus musculus chromosome 15, clone RP23-127B14, complete sequence Length = 211987 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaagac 787 ||||||||||||||||||||||| Sbjct: 36302 tgataattatgtgacaagaagac 36280
>gb|AC183639.2| Pan troglodytes chromosome X clone PTB-24B10 map human ortholog p11.23, complete sequence Length = 183185 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 927 ctttcacatttttaaggtattt 948 |||||||||||||||||||||| Sbjct: 93995 ctttcacatttttaaggtattt 93974
>gb|AC119971.8| Mus musculus chromosome 16, clone RP24-480D8, complete sequence Length = 166093 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 33273 tgataattatgtgacaagaaga 33252
>gb|AC091477.6| Mus musculus chromosome 1, clone RP23-309P1, complete sequence Length = 218109 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 29769 tgataattatgtgacaagaaga 29748
>gb|AC158949.6| Mus musculus chromosome 7, clone RP23-305I23, complete sequence Length = 159999 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 32809 tgataattatgtgacaagaaga 32830
>gb|AC147557.4| Mus musculus BAC clone RP23-452M8 from chromosome 14, complete sequence Length = 174133 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 30650 tgataattatgtgacaagaaga 30629
>gb|AC166104.4| Mus musculus BAC clone RP23-320G7 from chromosome 15, complete sequence Length = 209081 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 2784 tgataattatgtgacaagaaga 2805
>gb|AC118702.8| Mus musculus chromosome 5, clone RP24-166J1, complete sequence Length = 171263 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 98027 tgataattatgtgacaagaaga 98048
>gb|AC125120.4| Mus musculus BAC clone RP24-267M16 from chromosome 1, complete sequence Length = 183382 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 91490 tgataattatgtgacaagaaga 91469
>gb|AC116319.4| Mus musculus BAC clone RP23-265J2 from chromosome 14, complete sequence Length = 170494 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 43914 tgataattatgtgacaagaaga 43935
>gb|AC122395.4| Mus musculus BAC clone RP24-86H17 from chromosome 9, complete sequence Length = 203891 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 128364 tgataattatgtgacaagaaga 128343
>gb|AC122322.4| Mus musculus BAC clone RP23-321G20 from chromosome 6, complete sequence Length = 203073 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 105393 tgataattatgtgacaagaaga 105372
>gb|AC122833.2| Mus musculus BAC clone RP23-181J12 from 15, complete sequence Length = 200339 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 45811 tgataattatgtgacaagaaga 45832
>gb|AC121568.3| Mus musculus BAC clone RP23-226F18 from 15, complete sequence Length = 207297 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 73493 tgataattatgtgacaagaaga 73514
>gb|AC115708.6| Mus musculus chromosome 3, clone RP23-288G5, complete sequence Length = 178847 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 152371 tgataattatgtgacaagaaga 152392
>gb|AC115734.9| Mus musculus, clone RP23-466K3, complete sequence Length = 185209 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 103195 tgataattatgtgacaagaaga 103174
>gb|AC138134.6| Mus musculus strain C57BL/6J clone rp23-382i2 map 18, complete sequence Length = 202316 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 108231 tgataattatgtgacaagaaga 108210
>emb|AL135926.12| Human DNA sequence from clone RP11-375F2 on chromosome 1 Contains a ubiquitin-like 1 (sentrin) (UBL1) pseudogene, the 3' end of a novel gene and a ribosomal protein L29 (RPL29) pseudogene, complete sequence Length = 158519 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 234 tgagaaaaacatatttacattg 255 |||||||||||||||||||||| Sbjct: 93973 tgagaaaaacatatttacattg 93994
>emb|AL008626.1|HS1114G22 Human DNA sequence from clone RP5-1114G22 on chromosome 1q24-25 Contains the 5' end on a novel gene (KIAA0040), a novel gene, a ribosomal protein S29 (RPS29) pseudogene and a CpG island, complete sequence Length = 130626 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 797 agtttctttcagagtttctgtt 818 |||||||||||||||||||||| Sbjct: 9437 agtttctttcagagtttctgtt 9416
>gb|AC156386.7| Mus musculus chromosome 3, clone RP23-224L6, complete sequence Length = 167771 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 125904 tgataattatgtgacaagaaga 125925
>gb|AC119939.14| Mus musculus chromosome 5, clone RP24-267A23, complete sequence Length = 180700 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 171842 tgataattatgtgacaagaaga 171863
>gb|AC107863.9| Mus musculus chromosome 3, clone RP23-383E14, complete sequence Length = 194268 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 193452 tgataattatgtgacaagaaga 193431
>emb|AL731842.14| Mouse DNA sequence from clone RP23-181D11 on chromosome X, complete sequence Length = 194121 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 35407 tgataattatgtgacaagaaga 35428
>emb|BX681418.6| Mouse DNA sequence from clone RP23-191O20 on chromosome X, complete sequence Length = 206167 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 72234 tgataattatgtgacaagaaga 72255
>gb|AC110551.9| Mus musculus chromosome 7, clone RP23-245P16, complete sequence Length = 155691 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 84969 tgataattatgtgacaagaaga 84990
>emb|BX537306.5| Mouse DNA sequence from clone RP23-190K9 on chromosome 4, complete sequence Length = 27038 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 12086 tgataattatgtgacaagaaga 12107
>emb|BX545907.3| Mouse DNA sequence from clone RP23-300J4 on chromosome X, complete sequence Length = 49351 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 38788 tgataattatgtgacaagaaga 38767
>dbj|AB097412.1| Triticum aestivum Wcor18 mRNA for cold regulated protein, complete cds Length = 784 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 cggcggcgagatgtccttcttc 123 |||||||||||||||||||||| Sbjct: 193 cggcggcgagatgtccttcttc 172
>gb|AC118935.7| Mus musculus chromosome 5, clone RP24-172P15, complete sequence Length = 168119 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 6476 tgataattatgtgacaagaaga 6497
>gb|AC158945.6| Mus musculus chromosome 5, clone RP23-286J20, complete sequence Length = 210182 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 152284 tgataattatgtgacaagaaga 152263
>gb|AC140374.3| Mus musculus BAC clone RP24-76K4 from 6, complete sequence Length = 192872 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 136119 tgataattatgtgacaagaaga 136140
>gb|AC134849.5| Mus musculus BAC clone RP24-207G4 from 9, complete sequence Length = 151630 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 108483 tgataattatgtgacaagaaga 108504
>gb|AC154344.1| Mus musculus BAC clone RP23-226G16 from 16, complete sequence Length = 171340 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 158918 tgataattatgtgacaagaaga 158897
>gb|AC149059.3| Mus musculus BAC clone RP23-325A2 from 18, complete sequence Length = 206973 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 5670 tgataattatgtgacaagaaga 5649
>emb|AL935331.9| Mouse DNA sequence from clone RP24-264J19 on chromosome 2, complete sequence Length = 144436 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 67596 tgataattatgtgacaagaaga 67617
>emb|CT010451.9| Mouse DNA sequence from clone RP23-103I7 on chromosome 9, complete sequence Length = 214871 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 48771 tgataattatgtgacaagaaga 48750
>emb|AL845167.7| Mouse DNA sequence from clone RP23-36P16 on chromosome X, complete sequence Length = 162237 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 8895 tgataattatgtgacaagaaga 8916
>emb|AL671765.6| Mouse DNA sequence from clone RP23-100L23 on chromosome X, complete sequence Length = 191093 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 67751 tgataattatgtgacaagaaga 67730
>emb|AL845171.5| Mouse DNA sequence from clone RP23-38N8 on chromosome 4, complete sequence Length = 229784 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 121406 tgataattatgtgacaagaaga 121427
>emb|AL731711.11| Mouse DNA sequence from clone RP23-55A17 on chromosome X, complete sequence Length = 209999 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 48120 tgataattatgtgacaagaaga 48141
>gb|AC158984.2| Mus musculus BAC clone RP23-277H1 from chromosome 5, complete sequence Length = 215887 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaaga 786 |||||||||||||||||||||| Sbjct: 146976 tgataattatgtgacaagaaga 146997
>gb|AC190108.4| Canis Familiaris chromosome 9, clone XX-415N7, complete sequence Length = 187522 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 824 ccccaaatgctcagataatga 844 ||||||||||||||||||||| Sbjct: 167005 ccccaaatgctcagataatga 166985
>gb|CP000459.1| Burkholderia cenocepacia HI2424 chromosome 2, complete genome Length = 2998664 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cggcgtcgcggccgcgttcgt 151 ||||||||||||||||||||| Sbjct: 723005 cggcgtcgcggccgcgttcgt 722985
>gb|AC145123.3| Homo sapiens chromosome 8, clone WI2-82949F4, complete sequence Length = 37619 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 918 gatatgttcctttcacatttt 938 ||||||||||||||||||||| Sbjct: 12607 gatatgttcctttcacatttt 12627
>gb|CP000379.1| Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence Length = 2788459 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cggcgtcgcggccgcgttcgt 151 ||||||||||||||||||||| Sbjct: 1758116 cggcgtcgcggccgcgttcgt 1758136
>ref|NM_102571.2| Arabidopsis thaliana unknown protein (AT1G28060) mRNA, complete cds Length = 2604 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1038 aagcaaaggtgaagatgaccaactt 1062 |||||||||||||||||| |||||| Sbjct: 1777 aagcaaaggtgaagatgagcaactt 1801
>gb|AC134468.4| Mus musculus BAC clone RP23-97J21 from chromosome 12, complete sequence Length = 234400 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 765 tgataattatgtgacaagaag 785 ||||||||||||||||||||| Sbjct: 144295 tgataattatgtgacaagaag 144315
>gb|BT013201.1| Lycopersicon esculentum clone 134365R, mRNA sequence Length = 1626 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 629 tgccaaactttgatattgcttctgatgct 657 ||||||| |||||||||||| |||||||| Sbjct: 926 tgccaaattttgatattgctgctgatgct 954
>gb|AC098729.3| Mus musculus BAC clone RP23-3H23 from X, complete sequence Length = 213030 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1248 attttatcatatttacagaaa 1268 ||||||||||||||||||||| Sbjct: 108348 attttatcatatttacagaaa 108368
>gb|AC107756.9| Mus musculus chromosome 18, clone RP23-214K19, complete sequence Length = 216911 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 767 ataattatgtgacaagaagac 787 ||||||||||||||||||||| Sbjct: 32242 ataattatgtgacaagaagac 32222
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 cagcaggacctcgtgcgctcc 174 ||||||||||||||||||||| Sbjct: 2501315 cagcaggacctcgtgcgctcc 2501295
>gb|AY126993.1| Arabidopsis thaliana At1g28060/F13K9_16 mRNA, complete cds Length = 2605 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1038 aagcaaaggtgaagatgaccaactt 1062 |||||||||||||||||| |||||| Sbjct: 1777 aagcaaaggtgaagatgagcaactt 1801
>gb|AC108775.12| Mus musculus chromosome 1, clone RP23-331M15, complete sequence Length = 188126 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1149 ttaaaaaagaaaacagtggtc 1169 ||||||||||||||||||||| Sbjct: 109117 ttaaaaaagaaaacagtggtc 109097
>gb|AC108002.3| Homo sapiens chromosome 8, clone CTD-2292P10, complete sequence Length = 100079 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 918 gatatgttcctttcacatttt 938 ||||||||||||||||||||| Sbjct: 89663 gatatgttcctttcacatttt 89643
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 5.3 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 338 gtgtcctttctctttttg-ttcagaacct 365 |||||||||||||||||| |||||||||| Sbjct: 8341363 gtgtcctttctctttttgtttcagaacct 8341335
>emb|AL357566.12| Human DNA sequence from clone RP11-513B7 on chromosome 1, complete sequence Length = 61004 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 776 tgacaagaagacaatcagtgaagtt 800 |||||||||||||||||| |||||| Sbjct: 55310 tgacaagaagacaatcagggaagtt 55334
>emb|AL031114.2|HS468H17 Human DNA sequence from clone RP3-468H17 on chromosome Xq21.3-22.1, complete sequence Length = 115743 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 931 cacatttttaaggtatttgtt 951 ||||||||||||||||||||| Sbjct: 58959 cacatttttaaggtatttgtt 58979
>gb|AC153905.5| Mus musculus 6 BAC RP23-215A7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215955 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 744 ctacaaaaggcttttaacttc 764 ||||||||||||||||||||| Sbjct: 214909 ctacaaaaggcttttaacttc 214929
>emb|AJ291295.1|HVU291295 Hordeum vulgare mRNA for cold-regulated protein, clone cor tma-ap3 Length = 672 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 cggcggcgagatgtccttctt 122 ||||||||||||||||||||| Sbjct: 127 cggcggcgagatgtccttctt 107
>gb|AC069471.4|AC069471 Arabidopsis thaliana chromosome 1 BAC F13K9 genomic sequence, complete sequence Length = 126991 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1038 aagcaaaggtgaagatgaccaactt 1062 |||||||||||||||||| |||||| Sbjct: 68187 aagcaaaggtgaagatgagcaactt 68211
>emb|BX548073.8| Zebrafish DNA sequence from clone CH211-207C6, complete sequence Length = 222583 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 ggatcttgcccactgctggtg 413 ||||||||||||||||||||| Sbjct: 218386 ggatcttgcccactgctggtg 218406
>gb|AC114290.2| Homo sapiens chromosome 5 clone CTD-3062C19, complete sequence Length = 76144 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 793 gtgaagtttctttcagagttt 813 ||||||||||||||||||||| Sbjct: 39451 gtgaagtttctttcagagttt 39471
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 42.1 bits (21), Expect = 5.3 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 338 gtgtcctttctctttttg-ttcagaacct 365 |||||||||||||||||| |||||||||| Sbjct: 118034 gtgtcctttctctttttgtttcagaacct 118006
>gb|AF250284.1|AF250284 Amsacta moorei entomopoxvirus, complete genome Length = 232392 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 904 agcaaaaatatcaggatatgttcct 928 ||||||||||||||||| ||||||| Sbjct: 119626 agcaaaaatatcaggatctgttcct 119650
>gb|BT002294.1| Arabidopsis thaliana At1g28060/F13K9_16 mRNA, complete cds Length = 2361 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1038 aagcaaaggtgaagatgaccaactt 1062 |||||||||||||||||| |||||| Sbjct: 1748 aagcaaaggtgaagatgagcaactt 1772
>ref|XM_722562.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06900) partial mRNA Length = 4200 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 973 gatattattcaagttttggta 993 ||||||||||||||||||||| Sbjct: 2996 gatattattcaagttttggta 3016
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 ttcttccgggcggcgtcgcgg 141 ||||||||||||||||||||| Sbjct: 908186 ttcttccgggcggcgtcgcgg 908166
>gb|AC153601.6| Mus musculus 6 BAC RP23-405O6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201911 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 744 ctacaaaaggcttttaacttc 764 ||||||||||||||||||||| Sbjct: 46244 ctacaaaaggcttttaacttc 46264
>emb|AL732419.6| Mouse DNA sequence from clone RP23-228A20 on chromosome X, complete sequence Length = 194380 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1248 attttatcatatttacagaaa 1268 ||||||||||||||||||||| Sbjct: 32952 attttatcatatttacagaaa 32972 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 301,463,700 Number of extensions: 17625784 Number of successful extensions: 373584 Number of sequences better than 10.0: 98 Number of HSP's gapped: 373562 Number of HSP's successfully gapped: 156 Length of query: 1385 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1362 Effective length of database: 18,503,978,556 Effective search space: 25202418793272 Effective search space used: 25202418793272 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)