>LOC_Os08g44480:12008.t04172:unspliced-genomic 40S ribosomal protein S25-1, putative, expressed|
Length = 1723
Score = 80.8 bits (170), Expect(3) = 4e-33
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +2 / +2
Query: 182 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRI 289
VNN+VLFDQATYDKLL+EVPKYKQITPSVLSERLR+
Sbjct: 368 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRV 475
Score = 80.8 bits (170), Expect(3) = 4e-33
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +2 / +3
Query: 269 LSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRATNT* 400
L+ L+INGSLARRAI DLM RGLIRMVS+HSSQQI+TRATNT*
Sbjct: 1287 LAISLQINGSLARRAINDLMTRGLIRMVSVHSSQQIYTRATNT* 1418
Score = 22.6 bits (43), Expect(3) = 4e-33
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1 / +2
Query: 64 AVSHGAEEGEGPCGFV 111
+V+ G EEG+GP V
Sbjct: 164 SVAAGPEEGQGPAAVV 211
Score = 63.4 bits (132), Expect(2) = 1e-18
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = -2 / -2
Query: 300 REPLILSRSERTDGVICLYLGTSVSSLS*VAWSKSTAL 187
R + LS SERT+GVICLYLGTS SSLS*VAWS ST L
Sbjct: 486 RR*ITLSLSERTEGVICLYLGTSESSLS*VAWSNSTEL 373
Score = 51.9 bits (107), Expect(2) = 1e-18
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -2 / -1
Query: 396 VFVALVKICWLEWIDTILMSPLSIRSLIALRAREPLI 286
V VALV ICWLE +T+ + P I+SL+ALRAR+PLI
Sbjct: 1414 VLVALV*ICWLE*TETMRIRPRVIKSLMALRARDPLI 1304
Score = 56.1 bits (116), Expect(2) = 1e-13
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -3 / -3
Query: 284 *VARRGRMA*SACTWAPR*AACRKWPGRRA 195
*V++R R *SACTWAPR AACR+WPGR A
Sbjct: 470 *VSQRERRG*SACTWAPRRAACRRWPGRTA 381
Score = 42.8 bits (87), Expect(2) = 1e-13
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1 / -3
Query: 397 GVCGPGEDLLAGVDRHHPNEPPLHQVLDSPASQRAIDPESLGE 269
GV PG DLLA V+R H + P H ++D P SQ +D + G+
Sbjct: 1415 GVGCPGVDLLA*VNRDHAD*APCH*IIDGPTSQGPVDLQGNGK 1287
Score = 53.8 bits (111), Expect(2) = 2e-12
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +1 / +1
Query: 196 ALRPGHLRQAAHRGAQVQADHAIRPLRATQ 285
A+RPGHLRQAA RGAQVQADH +R L TQ
Sbjct: 382 AVRPGHLRQAALRGAQVQADHPLRSL*ETQ 471
Score = 40.9 bits (83), Expect(2) = 2e-12
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1 / +2
Query: 286 DQWLSGSQGYQGPDGEGAH*DGVYPLQPADLHQGHKHLIYHYHVFYGC 429
DQ + GS G+Q + G + G+ L+PADLHQG++HL + C
Sbjct: 1304 DQRVPGS*GHQ*FNDTGPNPHGLGSLKPADLHQGNQHLSVRVTCIFVC 1447
Score = 48.7 bits (100), Expect(2) = 4e-06
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -1 / -1
Query: 286 PESLGEDGWRDLLVLGHLGEQLVVSG 209
PESL E+G DLLVLGHLGEQLVV G
Sbjct: 472 PESLRENGGGDLLVLGHLGEQLVVGG 395
Score = 24.4 bits (47), Expect(2) = 4e-06
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3 / -2
Query: 401 IRCLWPW*RSAGWS 360
+RC PW RSAG S
Sbjct: 1419 LRCWLPWCRSAGLS 1378
Score = 34.1 bits (68), Expect = 0.88
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +3 / +1
Query: 300 WLAGLSRT*WRGGSLGWCLSTPASRSSPGPQTP 398
WL G S * G W T ASRS+PG TP
Sbjct: 1318 WLVGPSMI**HGA*SAWSRFTQASRSTPGQPTP 1416
>LOC_Os09g39540:12009.t03419:unspliced-genomic 40S ribosomal protein S25, putative, expressed|
Length = 1411
Score = 81.7 bits (172), Expect(2) = 1e-32
Identities = 35/44 (79%), Positives = 41/44 (93%)
Frame = +2 / +3
Query: 281 LRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRATNT*FIII 412
L+INGSLARRA+KDLM+RGLIRMVS+H SQQI+TRATNT* +I
Sbjct: 1086 LQINGSLARRAMKDLMDRGLIRMVSVHCSQQIYTRATNT*CCLI 1217
Score = 80.8 bits (170), Expect(2) = 1e-32
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +2 / +2
Query: 182 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRI 289
VNN+VLFDQATYDKLL+EVPKYKQITPSVLSERLR+
Sbjct: 371 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRV 478
Score = 65.2 bits (136), Expect(3) = 9e-24
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -2 / -1
Query: 402 NQVFVALVKICWLEWIDTILMSPLSIRSLIALRAREPLI 286
+ VFVALV ICWL+ DTIL+SPLSIRS IAL AR+PLI
Sbjct: 1207 HHVFVALV*ICWLQ*TDTILISPLSIRSFIALLARDPLI 1091
Score = 63.8 bits (133), Expect(3) = 9e-24
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -2 / -2
Query: 291 LILSRSERTDGVICLYLGTSVSSLS*VAWSKSTAL 187
+ L RSERT+GVICLYLGTS SSLS*VAWS ST L
Sbjct: 480 ITLRRSERTEGVICLYLGTSESSLS*VAWSNSTEL 376
Score = 22.6 bits (43), Expect(3) = 9e-24
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1 / -3
Query: 532 QNSKAIQHYW 503
Q S+ IQHYW
Sbjct: 1325 QKSQNIQHYW 1296
Score = 61.6 bits (128), Expect(2) = 8e-21
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1 / +2
Query: 286 DQWLSGSQGYQGPDGEGAH*DGVYPLQPADLHQGHKHLIYHY 411
D W+ G +GY+G DG GA+ DGV LQP DLHQG++H++ Y
Sbjct: 1091 D*WVPG*EGYEGSDG*GAYQDGVGSLQPTDLHQGNEHMMLSY 1216
Score = 61.1 bits (127), Expect(2) = 8e-21
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +1 / +1
Query: 196 ALRPGHLRQAAHRGAQVQADHAIRPLRATQ 285
A+RPGHLRQAA RGAQVQADH +RPLRA Q
Sbjct: 385 AVRPGHLRQAALRGAQVQADHPLRPLRAPQ 474
Score = 60.6 bits (126), Expect(2) = 6e-19
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -3 / -3
Query: 278 ARRGRMA*SACTWAPR*AACRKWPGRRA 195
ARRGR *SACTWAPR AACR+WPGR A
Sbjct: 467 ARRGRRG*SACTWAPRRAACRRWPGRTA 384
Score = 55.6 bits (115), Expect(2) = 6e-19
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = -1 / -3
Query: 412 DNDKSGVCGPGEDLLAGVDRHHPNEPPLHQVLDSPASQRAID 287
D S V PG +LLA ++RHHP++PP+HQ+L SP SQ I+
Sbjct: 1217 DKTTSCVRCPGVNLLAAMNRHHPDKPPIHQILHSPPSQGPIN 1092
Score = 55.6 bits (115), Expect = 3e-07
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -1 / -1
Query: 340 EPPLHQVLDSPASQRAIDPESLGEDGWRDLLVLGHLGEQLVVSG 209
+P H ++ + PE+LGEDG DLLVLGHLGEQLVV G
Sbjct: 529 QPAWHSIVGGNLNLSMNYPEALGEDGGGDLLVLGHLGEQLVVGG 398
Score = 46.4 bits (95), Expect = 2e-04
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / +1
Query: 291 MALWLAGLSRT*WRGGSLGWCLSTPASRSSPGPQTPD 401
M WL GL R *W GG GWC A+R +PG +T D
Sbjct: 1096 MGPWLGGL*RI*WIGGLSGWCRFIAANRFTPGQRTHD 1206
>LOC_Os11g05562:12011.t04340:unspliced-genomic 40S ribosomal protein S25, putative, expressed|
Length = 5995
Score = 79.0 bits (166), Expect(2) = 4e-27
Identities = 32/36 (88%), Positives = 36/36 (100%)
Frame = +2 / +1
Query: 182 VNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRI 289
VNN+VLFD+ATYDKLL+EVPKYKQITPSVLSERLR+
Sbjct: 400 VNNSVLFDKATYDKLLSEVPKYKQITPSVLSERLRV 507
Score = 67.0 bits (140), Expect(2) = 4e-27
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +2 / +1
Query: 284 RINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRATNT*FI 406
+INGSLAR+AIKDL RG IR+VS+HSSQ I+TRATN * I
Sbjct: 5617 QINGSLARQAIKDLESRGAIRVVSVHSSQLIYTRATNA*GI 5739
Score = 54.2 bits (112), Expect(2) = 1e-15
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = -2 / -3
Query: 285 LSRSERTDGVICLYLGTSVSSLS*VAWSKSTAL 187
LS SERT+GVICLYLGTS SLS*VA S ST L
Sbjct: 503 LSLSERTEGVICLYLGTSERSLS*VALSNSTEL 405
Score = 52.8 bits (109), Expect(2) = 1e-15
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = -2 / -3
Query: 408 MINQVFVALVKICWLEWIDTILMSPLSIRSLIALRAREPLI 286
++ Q VALV I WLE DT LM+PL RSL+A RA +PLI
Sbjct: 5741 LMPQALVALV*ISWLECTDTTLMAPLDSRSLMACRASDPLI 5619
Score = 54.7 bits (113), Expect(2) = 4e-13
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 196 ALRPGHLRQAAHRGAQVQADHAIRPLRATQDQW 294
A+R GHLRQA+ RGAQVQADH +RPLR Q +
Sbjct: 414 AVRQGHLRQASLRGAQVQADHPLRPLREAQGMY 512
Score = 44.1 bits (90), Expect(2) = 4e-13
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1 / +3
Query: 271 LRATQDQWLSGSQGYQGPDGEGAH*DGVYPLQPADLHQGHKHL 399
L DQW++ S G+QG + H GV +PA+LHQ H+ L
Sbjct: 5604 LNVLPDQWVARSTGHQGS*VKRRHQGGVCTFEPANLHQSHQRL 5732
Score = 53.3 bits (110), Expect(2) = 5e-10
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -3 / -1
Query: 284 *VARRGRMA*SACTWAPR*AACRKWPGRRA 195
* +RRGR *SACTWAPR ACR+WP R A
Sbjct: 502 *ASRRGRRG*SACTWAPRREACRRWPCRTA 413
Score = 35.0 bits (70), Expect(2) = 5e-10
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -1 / -2
Query: 400 SGVCGPGEDLLAGVDRHHPNEPPLHQVLDSPASQRAID 287
S V G G D LA + RHHP+ ++LD +S+R ID
Sbjct: 5733 SSVGGSGVD*LARMYRHHPDGAS*LKILDGLSSERPID 5620
Score = 50.6 bits (104), Expect = 1e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -1 / -2
Query: 286 PESLGEDGWRDLLVLGHLGEQLVVSG 209
PE LGEDG DLLVLGHLGE+LVV G
Sbjct: 504 PEPLGEDGGGDLLVLGHLGEKLVVGG 427
>LOC_Os08g35860:12008.t03326:unspliced-genomic cytokinin dehydrogenase 7, putative, expressed|
Length = 2949
Score = 31.3 bits (62), Expect(2) = 1.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -1 / -3
Query: 352 HHPNEPPLHQVLDSPASQRAIDPESLGEDGWRDLLVLGHLGEQ 224
HHP P L L + +RAI P + W LG GE+
Sbjct: 910 HHPRPPHLQSQLSPVSGRRAIGPSFVPIGWWCGAYRLGRGGER 782
Score = 23.5 bits (45), Expect(2) = 1.1
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 388 GPGEDLLAG 362
GPGED+LAG
Sbjct: 2532 GPGEDVLAG 2506
>LOC_Os02g45100:12002.t04100:unspliced-genomic mitochondrial import inner membrane translocase subunit tim23,|
putative, expressed
Length = 2070
Score = 27.6 bits (54), Expect(2) = 1.7
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1 / +2
Query: 196 ALRPGHLRQAAHRGAQVQAD 255
ALRP HL RG QV AD
Sbjct: 176 ALRPAHLAGVPLRGGQVPAD 235
Score = 22.6 bits (43), Expect(2) = 1.7
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 357 STPASRSSPGPQ 392
STPAS +SP P+
Sbjct: 262 STPASATSPAPR 297
>LOC_Os11g03520:12011.t00243:unspliced-genomic acyltransferase/ carboxylic ester hydrolase/ lipase, putative,|
expressed
Length = 1357
Score = 26.7 bits (52), Expect(2) = 3.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3 / +1
Query: 254 SACTWAPR*AACRKWPGRR 198
S+C W PR +C W RR
Sbjct: 427 SSCGWPPRRCSCCGWRPRR 483
Score = 22.6 bits (43), Expect(2) = 3.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1 / +3
Query: 337 PPLHQVLDSPASQRAIDPESLGEDGWR 257
PPL L+ A++ A GEDG R
Sbjct: 315 PPLITTLNGTATEVARGVNFAGEDGGR 395
>LOC_Os07g37454:12007.t03414:unspliced-genomic organic cation transporter 3, putative, expressed|
Length = 1978
Score = 30.9 bits (61), Expect = 8.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1 / -1
Query: 196 ALRPGHLRQAAHRGAQVQADHAIRPLRATQDQ 291
ALR GH R+AAH + + DH P+ ++
Sbjct: 505 ALRDGHAREAAHPRRRGERDHRAPPVDPAHEE 410
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 177,906,829
Number of extensions: 2509636
Number of successful extensions: 13941
Number of sequences better than 10.0: 24
Length of query: 197
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 149
Effective length of database: 52,912,542
Effective search space: 7883968758
Effective search space used: 7883968758
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)