>LOC_Os02g17850:12002.t01579:unspliced-genomic TOM2B, putative, expressed|
Length = 3110
Score = 88.1 bits (186), Expect(4) = 5e-40
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = +2 / +3
Query: 275 LQSASQIKTVTQLLSNMESTQLKSILPASRLQKDQKNTEPGELRVD*CVHCKKILTSHQS 454
L SASQIKTVTQLLSNME+ QL+SILPASRL+K QK TE GELR++* V+ I+T+ S
Sbjct: 1716 LCSASQIKTVTQLLSNMENNQLRSILPASRLEKAQKKTETGELRIE**VYQ*DIITNLCS 1895
Query: 455 PGSADF 472
P F
Sbjct: 1896 PSKGIF 1913
Score = 57.9 bits (120), Expect(4) = 5e-40
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2 / +1
Query: 65 KATVAEQIGQAVQSTSNLLQLMEQSSPAQI 154
+A VAEQI QAVQSTSNLLQLME+SSPAQ+
Sbjct: 55 QAAVAEQIAQAVQSTSNLLQLMEESSPAQV 144
Score = 44.6 bits (91), Expect(4) = 5e-40
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 228 SYLM*FLPWMLLWTVVCKAHL 290
+YL+*FLPWML+WT+VCK L
Sbjct: 1498 NYLV*FLPWMLIWTLVCKGDL 1560
Score = 39.6 bits (80), Expect(4) = 5e-40
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 156 TWLNSLRISWQKHLLQRTQSK 218
TW N R SWQKHLLQRTQ +
Sbjct: 1363 TWQNFPRNSWQKHLLQRTQGR 1425
Score = 82.6 bits (174), Expect(4) = 5e-38
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -3 / -2
Query: 423 *THQSTLSSPGSVFF*SFCNREAGKIDLSWVLSMFDNSCVTVLI*DALCKL 271
*T+ S LSSP SVFF +F NREAG+IDLSW+ SMFD SCVTVLI*+AL L
Sbjct: 1864 *TYHSILSSPVSVFFCAFSNREAGRIDLSWLFSMFDKSCVTVLI*EALQSL 1712
Score = 57.9 bits (120), Expect(4) = 5e-38
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -3 / -1
Query: 150 WAGEDCSMSWRRLEVDCTACPIC 82
WAGED SMSWRRL+VDCTAC IC
Sbjct: 140 WAGEDSSMSWRRLDVDCTACAIC 72
Score = 41.4 bits (84), Expect(4) = 5e-38
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = -3 / -2
Query: 288 DALCKLLSIKASKEEITLGSCCST 217
D LCKL SI ASKEEITLGS C T
Sbjct: 1558 DHLCKLASI*ASKEEITLGS*CRT 1487
Score = 41.4 bits (84), Expect(4) = 5e-38
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3 / -2
Query: 219 TCSVFFVRDAFAKRFLGSLAK 157
TC VFF RDAFAK FLGS A+
Sbjct: 1426 TCPVFFARDAFAKSFLGSFAR 1364
Score = 66.1 bits (138), Expect(4) = 4e-23
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +3 / +1
Query: 288 LKLRLSHNCCQTWRAPNLNLFCLPLDYRKIKRILSLENSGLTDVFT 425
LKLRL H+ CQTWR + +L CLPL RK +R L LENSGL D FT
Sbjct: 1729 LKLRLLHSSCQTWRITS*DLSCLPLG*RKHRRKLRLENSGLNDKFT 1866
Score = 41.4 bits (84), Expect(4) = 4e-23
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / +2
Query: 226 TAT*CNFFLGCFYGQ*FAKRI 288
+ T*CNFFLGC YG+*FAK I
Sbjct: 1496 STT*CNFFLGCLYGR*FAKVI 1558
Score = 34.1 bits (68), Expect(4) = 4e-23
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 103 VHLQPSPAHGAVLPCP 150
VH+QP PAHG VLP P
Sbjct: 93 VHVQPPPAHGGVLPGP 140
Score = 30.4 bits (60), Expect(4) = 4e-23
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1 / +2
Query: 160 G*TP*ESLGKSISYKEHRA 216
G T E+LGKSIS KEHRA
Sbjct: 1367 GKTSQETLGKSISCKEHRA 1423
Score = 54.2 bits (112), Expect(4) = 4e-22
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1 / -3
Query: 416 ISQP*VLQAQYSFDLSVIERQAK*I*VGCSPCLTTVV*QS*FE 288
I Q *VLQ+Q+S LS+ ERQA *I G SPCLT V*QS*FE
Sbjct: 1857 IIQS*VLQSQFSSVLSLTERQAG*ISAGYSPCLTRAV*QS*FE 1729
Score = 47.8 bits (98), Expect(4) = 4e-22
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -2 / -3
Query: 151 LGRGGLLHELEKVGGGLHRLPY 86
LGRGGLLHELE+VG GLHRL Y
Sbjct: 141 LGRGGLLHELEEVGRGLHRLRY 76
Score = 34.1 bits (68), Expect(4) = 4e-22
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -2 / -1
Query: 289 RCALQTTVHKSIQGRNYIR 233
R LQT+VH SIQGRNY R
Sbjct: 1559 RSPLQTSVHISIQGRNYTR 1503
Score = 32.7 bits (65), Expect(4) = 4e-22
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 199 KRCFCQEILREFSQVDL 149
KRCFCQE L +F QV L
Sbjct: 1406 KRCFCQEFLGKFCQVSL 1356
Score = 61.6 bits (128), Expect(2) = 3e-14
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +1 / +2
Query: 289 SN*DCHTTVVKHGEHPT*IYFACLSITERSKEY*AWRTQG*LM 417
SN*DC+T +VKHGE P IY ACLS+ E ++E * WRTQ *++
Sbjct: 1730 SN*DCYTALVKHGE*PAEIYPACLSVRESTEEN*DWRTQD*MI 1858
Score = 40.9 bits (83), Expect(2) = 3e-14
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +2 / +3
Query: 218 VLQQLPNVISSLDAFMDSSLQ 280
VL QLP+VISSLDA+MD+SLQ
Sbjct: 1488 VLHQLPSVISSLDAYMDASLQ 1550
Score = 40.5 bits (82), Expect(4) = 2e-07
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -2 / -1
Query: 358 GRQNRFKLGALHV*QQLCDSLNLR 287
GRQ+R +L LHV*Q+LC+SLNLR
Sbjct: 1799 GRQDRSQLVILHV*QELCNSLNLR 1728
Score = 29.0 bits (57), Expect(4) = 2e-07
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1 / -2
Query: 140 RTAP*AGEGWRWT 102
RT P*AG GW WT
Sbjct: 130 RTPP*AGGGWTWT 92
Score = 24.9 bits (48), Expect(4) = 2e-07
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 290 EMRFANYCP*KHPRKK 243
++ FAN P KHPRKK
Sbjct: 1560 KITFAN*RPYKHPRKK 1513
Score = 22.6 bits (43), Expect(4) = 2e-07
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 209 CSL*EMLLPR 180
CSL EMLLPR
Sbjct: 1416 CSLQEMLLPR 1387
>LOC_Os07g42160:12007.t03871:unspliced-genomic GTP pyrophosphokinase, putative, expressed|
Length = 3519
Score = 29.0 bits (57), Expect(2) = 8.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 148 GRGGLLHELEKVGGG 104
GRGG+LH L + GGG
Sbjct: 264 GRGGVLHHLHRHGGG 220
Score = 23.5 bits (45), Expect(2) = 8.2
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3 / -2
Query: 246 EITLGSCCSTCS 211
EITL SCC C+
Sbjct: 2000 EITLPSCCRYCT 1965
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 280,389,952
Number of extensions: 4509815
Number of successful extensions: 17719
Number of sequences better than 10.0: 13
Length of query: 236
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 187
Effective length of database: 52,856,264
Effective search space: 9884121368
Effective search space used: 9884121368
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)