ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf90b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9VSJ8:EXOC7_DROME Exocyst complex component 7 - Drosophila mela... 33 1.4
2Q7S7C0:CYM1_NEUCR Mitochondrial presequence protease - Neurospor... 31 5.3
3Q8WV48:CC107_HUMAN Coiled-coil domain-containing protein 107 pre... 31 5.3

>Q9VSJ8:EXOC7_DROME Exocyst complex component 7 - Drosophila melanogaster (Fruit fly)|
          Length = 693
 Score = 32.7 bits (73), Expect = 1.4
 Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 7/151 (4%)
 Frame = +2

Query: 251 LDAFMDSSLQSASQIKTVTQLLSNMESTQLKSILPASRLQKDQKNTEPGELRVD*CVHCK 430
           +D + D S Q +S +    + L N+E T L       +LQK Q+N E         ++C 
Sbjct: 28  VDKYHDLSTQMSSILTIFEKRLGNLEQTILPVYQETEQLQKRQQNLEA-------TLNCL 80

Query: 431 KILTSHQSPGSADFCWRTR**LKNCIVGKTQVAGGAGMCKKGSLLLTGVSRLRDLHSALR 610
           + + SH    S + C          ++ +  V G        S+ L  +++LRD +   R
Sbjct: 81  ESVLSHYDV-SQEVCQ---------LIHQGPVEGNI------SVFLDALAKLRDANDYFR 124

Query: 611 ---VTSFKLQT----FGVGSVELSNHYICLL 682
                S +L+     F  G   LS HY  LL
Sbjct: 125 HNNSQSVELENVTSLFNTGCEGLSQHYSMLL 155



to top

>Q7S7C0:CYM1_NEUCR Mitochondrial presequence protease - Neurospora crassa|
          Length = 1012

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +2

Query: 254 DAFMDSSLQSASQIKTVTQLLSNMESTQLKSILPASRLQKDQKNTEPGELR 406
           D+F+   +   SQ+K VT L S  ES  L+ ++  ++L++ Q+    G LR
Sbjct: 728 DSFLKEQVSGLSQVKLVTSLASRPESDPLEDVI--AKLKQIQQFALAGNLR 776



to top

>Q8WV48:CC107_HUMAN Coiled-coil domain-containing protein 107 precursor - Homo sapiens|
           (Human)
          Length = 283

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +2

Query: 215 QVLQQLPNVISSLDAFMDSSLQSASQIKTVTQLLSNMESTQLKSILPASRLQKDQKNTEP 394
           Q L Q    +++L A +D   +  + +    Q L NM+   +  +L  S+  KD + +EP
Sbjct: 115 QQLAQTEQHLNNLMAQLDPLFERVTTLAGAQQELLNMKLWTIHELLQDSKPDKDMEASEP 174

Query: 395 GE 400
           GE
Sbjct: 175 GE 176


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 112,739,599
Number of extensions: 2296979
Number of successful extensions: 5426
Number of sequences better than 10.0: 3
Number of HSP's gapped: 5423
Number of HSP's successfully gapped: 3
Length of query: 236
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 126
Effective length of database: 70,513,989
Effective search space: 8884762614
Effective search space used: 8884762614
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top