ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf90b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT835461.1| Oryza sativa (indica cultivar-group) cDNA clone:... 266 1e-67
2ref|NM_001053086.1| Oryza sativa (japonica cultivar-group) Os02g... 244 4e-61
3gb|DQ244951.1| Zea mays clone 11878 mRNA sequence 228 2e-56
4emb|CT835494.1| Oryza sativa (indica cultivar-group) cDNA clone:... 157 7e-35
5gb|AY109200.1| Zea mays PCO117759 mRNA sequence 151 4e-33
6gb|BT016321.1| Zea mays clone Contig154 mRNA sequence 103 8e-19
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
8dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
9dbj|AP006105.1| Lotus japonicus genomic DNA, chromosome 3, clone... 50 0.011
10gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 gen... 44 0.67
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.67
12emb|BX927297.12| Zebrafish DNA sequence from clone DKEY-238M4 in... 44 0.67
13ref|NM_001060003.1| Oryza sativa (japonica cultivar-group) Os04g... 42 2.7
14gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s... 42 2.7
15gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.7
16gb|AC117472.3| Homo sapiens 3 BAC RP11-567P17 (Roswell Park Canc... 42 2.7
17gb|AC093500.2| Drosophila melanogaster 3L BAC RP98-29P5 (Roswell... 42 2.7
18gb|AC010716.4| Drosophila melanogaster 3L BAC RP98-11A21 (Roswel... 42 2.7
19tpg|BK000939.1| TPA_inf: Oryza sativa transposon Rim2-M339, comp... 42 2.7
20gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 gen... 42 2.7
21emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 2.7
22dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.7
23dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.7
24dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.7
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.7
26emb|AL441943.6| Human DNA sequence from clone RP11-69C17 on chro... 42 2.7
27emb|AL354945.17| Human DNA sequence from clone RP11-59K17 on chr... 42 2.7
28dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.7
29dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.7
30dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.7
31dbj|AK119259.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.7
32ref|XM_307918.2| Anopheles gambiae str. PEST ENSANGP00000021868 ... 42 2.7
33gb|AY104494.1| Zea mays PCO133236 mRNA sequence 42 2.7 
>emb|CT835461.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN018N20, full
           insert sequence
          Length = 820
 Score =  266 bits (134), Expect = 1e-67
 Identities = 272/318 (85%)
 Strand = Plus / Plus

                                                                       
Query: 99  tgcagtccacctccaaccttctccagctcatggagcagtcctcccctgcccagatccact 158
           |||||||||| |||||||| ||||||||||||||| |||||||||| ||||||   ||| 
Sbjct: 103 tgcagtccacgtccaacctcctccagctcatggaggagtcctccccggcccaggctcacc 162

                                                                       
Query: 159 tggctaaactccctaagaatctcttggcaaaagcatctcttacaaagaacacagagcaag 218
           |||| ||||| || ||||| ||||||||||||||||||||| |||||||||||| ||| |
Sbjct: 163 tggcaaaacttcccaagaaactcttggcaaaagcatctcttgcaaagaacacagggcagg 222

                                                                       
Query: 219 tgctacaacagctacctaatgtaatttcttccttggatgcttttatggacagtagtttgc 278
           | || || || ||||||| ||||||||||||||||||||||| |||||||  ||||||||
Sbjct: 223 tcctgcatcaactacctagtgtaatttcttccttggatgcttatatggacgctagtttgc 282

                                                                       
Query: 279 aaagcgcatctcaaattaagactgtcacacaactgttgtcaaacatggagagcacccaac 338
           |||| || ||||||||||||||||| ||||| || ||||||||||||||||  | ||| |
Sbjct: 283 aaagtgcttctcaaattaagactgttacacagctcttgtcaaacatggagaataaccagc 342

                                                                       
Query: 339 ttaaatctattttgcctgcctctcgattacagaaagatcaaaagaatactgagcctggag 398
           | | ||||||  ||||||||||||  ||| ||||||  || ||||| |||||| ||||||
Sbjct: 343 tgagatctatcctgcctgcctctcagttagagaaagcacagaagaaaactgagactggag 402

                             
Query: 399 aactcagggttgactgat 416
           |||||||| |||| ||||
Sbjct: 403 aactcaggattgaatgat 420
to top
>ref|NM_001053086.1| Oryza sativa (japonica cultivar-group) Os02g0279600 (Os02g0279600)
           mRNA, complete cds
          Length = 366

 Score =  244 bits (123), Expect = 4e-61
 Identities = 231/267 (86%)
 Strand = Plus / Plus

                                                                       
Query: 99  tgcagtccacctccaaccttctccagctcatggagcagtcctcccctgcccagatccact 158
           |||||||||| |||||||| ||||||||||||||| |||||||||| ||||||   ||| 
Sbjct: 77  tgcagtccacgtccaacctcctccagctcatggaggagtcctccccggcccaggctcacc 136

                                                                       
Query: 159 tggctaaactccctaagaatctcttggcaaaagcatctcttacaaagaacacagagcaag 218
           |||| ||||| || ||||| ||||||||||||||||||||| |||||||||||| ||| |
Sbjct: 137 tggcaaaacttcccaagaaactcttggcaaaagcatctcttgcaaagaacacagggcagg 196

                                                                       
Query: 219 tgctacaacagctacctaatgtaatttcttccttggatgcttttatggacagtagtttgc 278
           | || || || ||||||| ||||||||||||||||||||||| |||||||  ||||||||
Sbjct: 197 tcctgcatcaactacctagtgtaatttcttccttggatgcttatatggacgctagtttgc 256

                                                                       
Query: 279 aaagcgcatctcaaattaagactgtcacacaactgttgtcaaacatggagagcacccaac 338
           |||| || ||||||||||||||||| ||||| || ||||||||||||||||  | ||| |
Sbjct: 257 aaagtgcttctcaaattaagactgttacacagctcttgtcaaacatggagaataaccagc 316

                                      
Query: 339 ttaaatctattttgcctgcctctcgat 365
           | | ||||||  |||||||||||||||
Sbjct: 317 tgagatctatcctgcctgcctctcgat 343
to top
>gb|DQ244951.1| Zea mays clone 11878 mRNA sequence
          Length = 678

 Score =  228 bits (115), Expect = 2e-56
 Identities = 199/227 (87%)
 Strand = Plus / Plus

                                                                       
Query: 103 gtccacctccaaccttctccagctcatggagcagtcctcccctgcccagatccacttggc 162
           |||||||||||| || |||||||||||||||||||||||||| || ||| | ||||||||
Sbjct: 127 gtccacctccaatctcctccagctcatggagcagtcctcccccgctcaggttcacttggc 186

                                                                       
Query: 163 taaactccctaagaatctcttggcaaaagcatctcttacaaagaacacagagcaagtgct 222
            ||||| || ||||| || |||| |||||||||  || |||||||||| ||||| || ||
Sbjct: 187 aaaactacccaagaacctgttggaaaaagcatcctttgcaaagaacacggagcatgtact 246

                                                                       
Query: 223 acaacagctacctaatgtaatttcttccttggatgcttttatggacagtagtttgcaaag 282
            || ||||||||| | |||||||| ||||||||||||| ||||||||| |||||||||||
Sbjct: 247 gcaccagctacctcaagtaatttcatccttggatgcttatatggacaggagtttgcaaag 306

                                                          
Query: 283 cgcatctcaaattaagactgtcacacaactgttgtcaaacatggaga 329
            |||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 307 tgcatctcaaattaagactgtcacacagctcttgtcaaacatggaga 353
to top
>emb|CT835494.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN068E07, full
           insert sequence
          Length = 847

 Score =  157 bits (79), Expect = 7e-35
 Identities = 160/187 (85%)
 Strand = Plus / Plus

                                                                       
Query: 230 ctacctaatgtaatttcttccttggatgcttttatggacagtagtttgcaaagcgcatct 289
           ||||||| ||||||||||||||||||||||| |||||||  |||||||||||| || |||
Sbjct: 297 ctacctagtgtaatttcttccttggatgcttatatggacgctagtttgcaaagtgcttct 356

                                                                       
Query: 290 caaattaagactgtcacacaactgttgtcaaacatggagagcacccaacttaaatctatt 349
           |||||||||||||| ||||| || ||||||||||||||||  | ||| || | |||||| 
Sbjct: 357 caaattaagactgttacacagctcttgtcaaacatggagaataaccagctgagatctatc 416

                                                                       
Query: 350 ttgcctgcctctcgattacagaaagatcaaaagaatactgagcctggagaactcagggtt 409
            ||||||||||||  ||| ||||||  || ||||| |||||| |||||||||||||| ||
Sbjct: 417 ctgcctgcctctcagttagagaaagcacagaagaaaactgagactggagaactcaggatt 476

                  
Query: 410 gactgat 416
           || ||||
Sbjct: 477 gaatgat 483



 Score =  123 bits (62), Expect = 9e-25
 Identities = 101/114 (88%)
 Strand = Plus / Plus

                                                                       
Query: 99  tgcagtccacctccaaccttctccagctcatggagcagtcctcccctgcccagatccact 158
           |||||||||| |||||||| ||||||||||||||| |||||||||| ||||||   ||| 
Sbjct: 103 tgcagtccacgtccaacctcctccagctcatggaggagtcctccccggcccaggctcacc 162

                                                                 
Query: 159 tggctaaactccctaagaatctcttggcaaaagcatctcttacaaagaacacag 212
           |||| ||||| || ||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 163 tggcaaaacttcccaagaaactcttggcaaaagcatctcttgcaaagaacacag 216
to top
>gb|AY109200.1| Zea mays PCO117759 mRNA sequence
          Length = 536

 Score =  151 bits (76), Expect = 4e-33
 Identities = 154/180 (85%)
 Strand = Plus / Plus

                                                                       
Query: 103 gtccacctccaaccttctccagctcatggagcagtcctcccctgcccagatccacttggc 162
           ||||||||||||||| |||||||| ||||||||||||||||| || ||| | || |||||
Sbjct: 105 gtccacctccaacctcctccagctgatggagcagtcctcccccgctcaggttcatttggc 164

                                                                       
Query: 163 taaactccctaagaatctcttggcaaaagcatctcttacaaagaacacagagcaagtgct 222
            ||||| || ||||| ||  ||| |||||||||  || |||||||||||||||| |||||
Sbjct: 165 aaaactaccgaagaacctgctggaaaaagcatcctttgcaaagaacacagagcatgtgct 224

                                                                       
Query: 223 acaacagctacctaatgtaatttcttccttggatgcttttatggacagtagtttgcaaag 282
            || ||||||||| | ||||| || ||||||||||||| ||||||||| |||||||||||
Sbjct: 225 gcaccagctacctcaagtaatatcatccttggatgcttatatggacaggagtttgcaaag 284
to top
>gb|BT016321.1| Zea mays clone Contig154 mRNA sequence
          Length = 1558

 Score =  103 bits (52), Expect = 8e-19
 Identities = 109/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 155 cacttggctaaactccctaagaatctcttggcaaaagcatctcttacaaagaacacagag 214
           |||||||| ||||| || ||||| || |||| |||||||||  || |||||||||| |||
Sbjct: 432 cacttggcaaaactacccaagaacctgttggaaaaagcatcctttgcaaagaacacggag 491

                                                                       
Query: 215 caagtgctacaacagctacctaatgtaatttcttccttggatgcttttatggacagtagt 274
           || || || || ||||||||| | |||||||| ||||||||||||| ||||||||| |||
Sbjct: 492 catgtactgcaccagctacctcaagtaatttcatccttggatgcttatatggacaggagt 551

                   
Query: 275 ttgcaaag 282
           ||||||||
Sbjct: 552 ttgcaaag 559



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                          
Query: 284  gcatctcaaattaagactgtcacacaactgttgtcaaacatggaga 329
            |||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 1078 gcatctcaaattaagactgtcacacagctcttgtcaaacatggaga 1123
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                            
Query: 287      tctcaaattaagactgtcacacaactgttgtcaaacatggagagcacccaacttaaatct 346
                ||||||||||||||||| ||||| || ||||||||||||||||  | ||| || | ||||
Sbjct: 10331538 tctcaaattaagactgttacacagctcttgtcaaacatggagaataaccagctgagatct 10331597

                                                                            
Query: 347      attttgcctgcctctcgattacagaaagatcaaaagaatactgagcctggagaactcagg 406
                ||  ||||||||||||| ||| ||||||  || ||||| |||||| ||||||||||||||
Sbjct: 10331598 atcctgcctgcctctcggttagagaaagcacagaagaaaactgagactggagaactcagg 10331657

                          
Query: 407      gttgactgat 416
                 |||| ||||
Sbjct: 10331658 attgaatgat 10331667



 Score = 73.8 bits (37), Expect = 8e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                     
Query: 99       tgcagtccacctccaaccttctccagctcatggagcagtcctcccctgcccag 151
                |||||||||| |||||||| ||||||||||||||| |||||||||| ||||||
Sbjct: 10329899 tgcagtccacgtccaacctcctccagctcatggaggagtcctccccggcccag 10329951



 Score = 73.8 bits (37), Expect = 8e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                     
Query: 230      ctacctaatgtaatttcttccttggatgcttttatggacagtagtttgcaaag 282
                ||||||| ||||||||||||||||||||||| |||||||  ||||||||||||
Sbjct: 10331310 ctacctagtgtaatttcttccttggatgcttatatggacgctagtttgcaaag 10331362



 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                      
Query: 159      tggctaaactccctaagaatctcttggcaaaagcatctcttacaaagaacacag 212
                |||| ||||| || ||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 10331176 tggcaaaacttcccaagaaactcttggcaaaagcatctcttgcaaagaacacag 10331229
to top
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0444A09
          Length = 125900

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                         
Query: 287   tctcaaattaagactgtcacacaactgttgtcaaacatggagagcacccaacttaaatct 346
             ||||||||||||||||| ||||| || ||||||||||||||||  | ||| || | ||||
Sbjct: 97348 tctcaaattaagactgttacacagctcttgtcaaacatggagaataaccagctgagatct 97407

                                                                         
Query: 347   attttgcctgcctctcgattacagaaagatcaaaagaatactgagcctggagaactcagg 406
             ||  ||||||||||||| ||| ||||||  || ||||| |||||| ||||||||||||||
Sbjct: 97408 atcctgcctgcctctcggttagagaaagcacagaagaaaactgagactggagaactcagg 97467

                       
Query: 407   gttgactgat 416
              |||| ||||
Sbjct: 97468 attgaatgat 97477



 Score = 73.8 bits (37), Expect = 8e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                  
Query: 99    tgcagtccacctccaaccttctccagctcatggagcagtcctcccctgcccag 151
             |||||||||| |||||||| ||||||||||||||| |||||||||| ||||||
Sbjct: 95709 tgcagtccacgtccaacctcctccagctcatggaggagtcctccccggcccag 95761



 Score = 73.8 bits (37), Expect = 8e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                  
Query: 230   ctacctaatgtaatttcttccttggatgcttttatggacagtagtttgcaaag 282
             ||||||| ||||||||||||||||||||||| |||||||  ||||||||||||
Sbjct: 97120 ctacctagtgtaatttcttccttggatgcttatatggacgctagtttgcaaag 97172



 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 159   tggctaaactccctaagaatctcttggcaaaagcatctcttacaaagaacacag 212
             |||| ||||| || ||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 96986 tggcaaaacttcccaagaaactcttggcaaaagcatctcttgcaaagaacacag 97039
to top
>dbj|AP006105.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT14C19, TM0190,
              complete sequence
          Length = 125299

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 99     tgcagtccacctccaaccttctccagctcatggagcagtcctcccctgcccag 151
              ||||||||||||||||||| ||||| |||||| | || || || |||||||||
Sbjct: 125285 tgcagtccacctccaacctcctccacctcatgcaacaatcttctcctgcccag 125233
to top
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete
              sequence
          Length = 178022

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 10     cgacgacgacgacgaccaggag 31
              ||||||||||||||||||||||
Sbjct: 130574 cgacgacgacgacgaccaggag 130595
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 10       cgacgacgacgacgaccaggag 31
                ||||||||||||||||||||||
Sbjct: 20868175 cgacgacgacgacgaccaggag 20868196



 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 299      actgtcacacaactgttgtcaaacatgga 327
                ||||||| |||||| ||||||||||||||
Sbjct: 22060051 actgtcatacaactcttgtcaaacatgga 22060023
to top
>emb|BX927297.12| Zebrafish DNA sequence from clone DKEY-238M4 in linkage group 16,
              complete sequence
          Length = 132039

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 662    aaccattatatatgtttattgt 683
              ||||||||||||||||||||||
Sbjct: 106787 aaccattatatatgtttattgt 106808
to top
>ref|NM_001060003.1| Oryza sativa (japonica cultivar-group) Os04g0545600 (Os04g0545600)
           mRNA, complete cds
          Length = 827

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  cgacgacgacgacgaccagga 30
           |||||||||||||||||||||
Sbjct: 515 cgacgacgacgacgaccagga 535
to top
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence
          Length = 24543557

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 10      cgacgacgacgacgaccagga 30
               |||||||||||||||||||||
Sbjct: 5829752 cgacgacgacgacgaccagga 5829772
to top
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0053E01, complete sequence
          Length = 180426

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     gtgcgacgacgacgacgacca 27
             |||||||||||||||||||||
Sbjct: 12882 gtgcgacgacgacgacgacca 12862
to top
>gb|AC117472.3| Homo sapiens 3 BAC RP11-567P17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 119730

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 235   taatgtaatttcttccttggatgctttta 263
             ||||||||||||||| |||| ||||||||
Sbjct: 98112 taatgtaatttcttctttggttgctttta 98140
to top
>gb|AC093500.2| Drosophila melanogaster 3L BAC RP98-29P5 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 173558

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 10     cgacgacgacgacgaccagga 30
              |||||||||||||||||||||
Sbjct: 138034 cgacgacgacgacgaccagga 138054
to top
>gb|AC010716.4| Drosophila melanogaster 3L BAC RP98-11A21 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 173386

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    cgacgacgacgacgaccagga 30
             |||||||||||||||||||||
Sbjct: 42963 cgacgacgacgacgaccagga 42983
to top
>tpg|BK000939.1| TPA_inf: Oryza sativa transposon Rim2-M339, complete sequence
          Length = 15678

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 10   cgacgacgacgacgaccagga 30
            |||||||||||||||||||||
Sbjct: 5866 cgacgacgacgacgaccagga 5886
to top
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete
             sequence
          Length = 187707

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 299   actgtcacacaactgttgtcaaacatgga 327
             ||||||| |||||| ||||||||||||||
Sbjct: 64595 actgtcatacaactcttgtcaaacatgga 64567
to top
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21,
             complete sequence
          Length = 141787

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    cgacgacgacgacgaccagga 30
             |||||||||||||||||||||
Sbjct: 43389 cgacgacgacgacgaccagga 43369
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 8        tgcgacgacgacgacgaccaggaga 32
                |||||||||||||||||| ||||||
Sbjct: 26190067 tgcgacgacgacgacgacgaggaga 26190091
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 7        gtgcgacgacgacgacgacca 27
                |||||||||||||||||||||
Sbjct: 15620778 gtgcgacgacgacgacgacca 15620758
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 10       cgacgacgacgacgaccagga 30
                |||||||||||||||||||||
Sbjct: 27307461 cgacgacgacgacgaccagga 27307441
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 10       cgacgacgacgacgaccagga 30
                |||||||||||||||||||||
Sbjct: 19521074 cgacgacgacgacgaccagga 19521094
to top
>emb|AL441943.6| Human DNA sequence from clone RP11-69C17 on chromosome 10 Contains four
              novel genes (FLJ40155) (FLJ31539), complete sequence
          Length = 203234

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 420    ttcactgcaaaaagatcttga 440
              |||||||||||||||||||||
Sbjct: 170201 ttcactgcaaaaagatcttga 170221
to top
>emb|AL354945.17| Human DNA sequence from clone RP11-59K17 on chromosome 6, complete
             sequence
          Length = 120745

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 196   tcttacaaagaacacagagca 216
             |||||||||||||||||||||
Sbjct: 29003 tcttacaaagaacacagagca 29023
to top
>dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0086A10
          Length = 151071

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 10     cgacgacgacgacgaccagga 30
              |||||||||||||||||||||
Sbjct: 129890 cgacgacgacgacgaccagga 129910
to top
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1191_A10
          Length = 140643

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 8      tgcgacgacgacgacgaccaggaga 32
              |||||||||||||||||| ||||||
Sbjct: 133998 tgcgacgacgacgacgacgaggaga 134022
to top
>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1014_E06
          Length = 112241

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 8     tgcgacgacgacgacgaccaggaga 32
             |||||||||||||||||| ||||||
Sbjct: 22992 tgcgacgacgacgacgacgaggaga 23016
to top
>dbj|AK119259.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-H05, full
           insert sequence
          Length = 827

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  cgacgacgacgacgaccagga 30
           |||||||||||||||||||||
Sbjct: 515 cgacgacgacgacgaccagga 535
to top
>ref|XM_307918.2| Anopheles gambiae str. PEST ENSANGP00000021868
           (ENSANGG00000019379), partial mRNA
          Length = 885

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 8   tgcgacgacgacgacgaccaggaga 32
           ||||||||||||||||||| |||||
Sbjct: 832 tgcgacgacgacgacgacctggaga 856
to top
>gb|AY104494.1| Zea mays PCO133236 mRNA sequence
          Length = 1077

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  cgacgacgacgacgaccagga 30
           |||||||||||||||||||||
Sbjct: 136 cgacgacgacgacgaccagga 156


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 126,437,192
Number of extensions: 7251290
Number of successful extensions: 193897
Number of sequences better than 10.0: 33
Number of HSP's gapped: 193894
Number of HSP's successfully gapped: 42
Length of query: 710
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 688
Effective length of database: 18,508,616,841
Effective search space: 12733928386608
Effective search space used: 12733928386608
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top