ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf93f15 |
|---|---|
| Clone Library Name | barley_pub |
>Os05g0155400:Os05g0155400 | Length = 151 Score = 109 bits (272), Expect = 4e-24 Identities = 52/69 (75%), Positives = 54/69 (78%), Gaps = 4/69 (5%) Frame = +1 Query: 148 MDSSHHKVIGVAPAVA----EGGRMCCVECRTTTTPMWRSGPTGPRTLCNACGIRYRKKR 315 M SS KVIG+A A A E GR CCVEC TTTPMWR GPTGPR+LCNACGIRYRKKR Sbjct: 1 MGSSDQKVIGIAAAAAAAAEEAGRRCCVECGATTTPMWRGGPTGPRSLCNACGIRYRKKR 60 Query: 316 RQELGLDNK 342 RQELGLD K Sbjct: 61 RQELGLDKK 69
>AK067244:Os01g0343300 | Length = 131 Score = 103 bits (258), Expect = 2e-22 Identities = 48/63 (76%), Positives = 53/63 (84%) Frame = +1 Query: 148 MDSSHHKVIGVAPAVAEGGRMCCVECRTTTTPMWRSGPTGPRTLCNACGIRYRKKRRQEL 327 M S+ KV+G+ VAE GR CVECR TTTPMWRSGPTGPR+LCNACGIRYRKKRRQ+L Sbjct: 1 MGSTDRKVVGIG--VAEEGRRSCVECRATTTPMWRSGPTGPRSLCNACGIRYRKKRRQDL 58 Query: 328 GLD 336 GLD Sbjct: 59 GLD 61
>AK073709:Os03g0831200 | Length = 136 Score = 79.3 bits (194), Expect = 5e-15 Identities = 32/48 (66%), Positives = 38/48 (79%) Frame = +1 Query: 193 AEGGRMCCVECRTTTTPMWRSGPTGPRTLCNACGIRYRKKRRQELGLD 336 A G C +C TT TP+WR GP+GP++LCNACGIRYRKKRR+ LGLD Sbjct: 20 ASGEPKACTDCHTTKTPLWRGGPSGPKSLCNACGIRYRKKRREALGLD 67
>AK121896:Os01g0745700 | Length = 387 Score = 69.7 bits (169), Expect = 4e-12 Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 4/70 (5%) Frame = +1 Query: 118 AEQTIRPAPPMDSSHHKVI----GVAPAVAEGGRMCCVECRTTTTPMWRSGPTGPRTLCN 285 A++ PAPP + V G APA A G C+ C T TP WR+GP GP+TLCN Sbjct: 228 AKKKDAPAPPAQAQLSSVPVHSGGSAPAAAAGEGRRCLHCETDKTPQWRTGPMGPKTLCN 287 Query: 286 ACGIRYRKKR 315 ACG+RY+ R Sbjct: 288 ACGVRYKSGR 297
>AK069851:Os06g0571800 | Length = 347 Score = 67.0 bits (162), Expect = 2e-11 Identities = 33/62 (53%), Positives = 38/62 (61%) Frame = +1 Query: 133 RPAPPMDSSHHKVIGVAPAVAEGGRMCCVECRTTTTPMWRSGPTGPRTLCNACGIRYRKK 312 RPA + H G A A G C +C TT TP+WRSGP GP++LCNACGIR RK Sbjct: 179 RPAQAYEDHGH---GGAMGQAFGVIRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKA 235 Query: 313 RR 318 RR Sbjct: 236 RR 237
>AK068306:Os12g0168800 | Length = 414 Score = 64.3 bits (155), Expect = 2e-10 Identities = 31/67 (46%), Positives = 36/67 (53%) Frame = +1 Query: 115 TAEQTIRPAPPMDSSHHKVIGVAPAVAEGGRMCCVECRTTTTPMWRSGPTGPRTLCNACG 294 TA P PP + K A A + CV C +T TP WR GPTG TLCNACG Sbjct: 246 TAPAPAPPPPPPQPASPKTKTKAKAKKPKRKRSCVHCGSTETPQWREGPTGRGTLCNACG 305 Query: 295 IRYRKKR 315 +RYR+ R Sbjct: 306 VRYRQGR 312 Score = 53.1 bits (126), Expect = 4e-07 Identities = 25/59 (42%), Positives = 31/59 (52%) Frame = +1 Query: 130 IRPAPPMDSSHHKVIGVAPAVAEGGRMCCVECRTTTTPMWRSGPTGPRTLCNACGIRYR 306 + P PP+D + A+ R C + C TP WRSGP G TLCNACG+R R Sbjct: 127 VAPPPPVDPGEEEA---GKRAAKRARRC-LNCDAVETPQWRSGPMGRSTLCNACGVRLR 181
>AK099607:Os02g0220400 | Length = 353 Score = 63.9 bits (154), Expect = 2e-10 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = +1 Query: 214 CVECRTTTTPMWRSGPTGPRTLCNACGIRYRKKRR 318 C +C TT TP+WRSGP GP++LCNACGIR RK RR Sbjct: 178 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARR 212
>Os05g0520300:Os05g0520300 | Length = 386 Score = 63.5 bits (153), Expect = 3e-10 Identities = 27/45 (60%), Positives = 32/45 (71%) Frame = +1 Query: 181 APAVAEGGRMCCVECRTTTTPMWRSGPTGPRTLCNACGIRYRKKR 315 A A AEG R C+ C T TP WR+GP GP+TLCNACG+RY+ R Sbjct: 246 AQAAAEGRR--CLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGR 288
>AK101287:Os05g0578900 | Length = 279 Score = 62.0 bits (149), Expect = 8e-10 Identities = 22/36 (61%), Positives = 30/36 (83%) Frame = +1 Query: 214 CVECRTTTTPMWRSGPTGPRTLCNACGIRYRKKRRQ 321 C C T +TP+WR+GP GP++LCNACGIRY+K+ R+ Sbjct: 154 CANCGTASTPLWRNGPRGPKSLCNACGIRYKKEERR 189
>AK073464:Os05g0578900 | Length = 279 Score = 62.0 bits (149), Expect = 8e-10 Identities = 22/36 (61%), Positives = 30/36 (83%) Frame = +1 Query: 214 CVECRTTTTPMWRSGPTGPRTLCNACGIRYRKKRRQ 321 C C T +TP+WR+GP GP++LCNACGIRY+K+ R+ Sbjct: 154 CANCGTASTPLWRNGPRGPKSLCNACGIRYKKEERR 189
>Os03g0145200:Os03g0145200 | Length = 219 Score = 57.8 bits (138), Expect = 1e-08 Identities = 28/69 (40%), Positives = 36/69 (52%) Frame = +1 Query: 109 KITAEQTIRPAPPMDSSHHKVIGVAPAVAEGGRMCCVECRTTTTPMWRSGPTGPRTLCNA 288 ++TA ++ P S + A A A R C C TP WR GP GPRTLCNA Sbjct: 93 RVTAPWSLAPL----LSRPRQAAAAAADAGAPRRRCTHCAVDETPQWRLGPDGPRTLCNA 148 Query: 289 CGIRYRKKR 315 CG+R++ R Sbjct: 149 CGVRFKSGR 157
>Os10g0557600:Os10g0557600 | Length = 387 Score = 56.6 bits (135), Expect = 3e-08 Identities = 21/40 (52%), Positives = 27/40 (67%) Frame = +1 Query: 196 EGGRMCCVECRTTTTPMWRSGPTGPRTLCNACGIRYRKKR 315 E G C C + TP WR+GP GP+TLCNACG+R++ R Sbjct: 272 EAGVRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGR 311
>AK119611:Os04g0539500 | Length = 427 Score = 55.5 bits (132), Expect = 7e-08 Identities = 27/61 (44%), Positives = 31/61 (50%) Frame = +1 Query: 133 RPAPPMDSSHHKVIGVAPAVAEGGRMCCVECRTTTTPMWRSGPTGPRTLCNACGIRYRKK 312 R P H A A A G R C C TP WR+GP G +TLCNACG+RY+ Sbjct: 316 RGRKPKQLPPHPSGAAASAPAPGDRRCS-HCGVQKTPQWRAGPEGAKTLCNACGVRYKSG 374 Query: 313 R 315 R Sbjct: 375 R 375
>AK099144:Os04g0539500 | Length = 390 Score = 55.5 bits (132), Expect = 7e-08 Identities = 27/61 (44%), Positives = 31/61 (50%) Frame = +1 Query: 133 RPAPPMDSSHHKVIGVAPAVAEGGRMCCVECRTTTTPMWRSGPTGPRTLCNACGIRYRKK 312 R P H A A A G R C C TP WR+GP G +TLCNACG+RY+ Sbjct: 279 RGRKPKQLPPHPSGAAASAPAPGDRRCS-HCGVQKTPQWRAGPEGAKTLCNACGVRYKSG 337 Query: 313 R 315 R Sbjct: 338 R 338
>AK060574:Os04g0539500 | Length = 390 Score = 55.5 bits (132), Expect = 7e-08 Identities = 27/61 (44%), Positives = 31/61 (50%) Frame = +1 Query: 133 RPAPPMDSSHHKVIGVAPAVAEGGRMCCVECRTTTTPMWRSGPTGPRTLCNACGIRYRKK 312 R P H A A A G R C C TP WR+GP G +TLCNACG+RY+ Sbjct: 279 RGRKPKQLPPHPSGAAASAPAPGDRRCS-HCGVQKTPQWRAGPEGAKTLCNACGVRYKSG 337 Query: 313 R 315 R Sbjct: 338 R 338
>AK101421:Os12g0624900 | Length = 309 Score = 54.3 bits (129), Expect = 2e-07 Identities = 19/34 (55%), Positives = 25/34 (73%) Frame = +1 Query: 214 CVECRTTTTPMWRSGPTGPRTLCNACGIRYRKKR 315 C C + TP WR+GP GP+TLCNACG+R++ R Sbjct: 239 CTHCLSYKTPQWRTGPLGPKTLCNACGVRFKSGR 272 Score = 31.6 bits (70), Expect = 1.1 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +1 Query: 214 CVECRTTTTPMWRSGPTGPRTLCNACGIR 300 C C ++ +P W GP+GP C+AC +R Sbjct: 160 CSYCLSSQSPQWWDGPSGP--TCDACRLR 186
>AK109477:Os02g0645600 | Length = 387 Score = 53.5 bits (127), Expect = 3e-07 Identities = 24/47 (51%), Positives = 28/47 (59%) Frame = +1 Query: 175 GVAPAVAEGGRMCCVECRTTTTPMWRSGPTGPRTLCNACGIRYRKKR 315 G A A G R C C TP WR+GP G +TLCNACG+RY+ R Sbjct: 294 GGAALPATGDRRCS-HCGVQKTPQWRAGPEGAKTLCNACGVRYKSGR 339
>AK073803:Os07g0615900 | Length = 742 Score = 49.3 bits (116), Expect = 5e-06 Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = +1 Query: 202 GRMCCVECRTT--TTPMWRSGPTGPRTLCNACGIRYRKKRRQEL 327 G + C+ C + TP R GP GPRTLCNACGI YRK + + + Sbjct: 61 GHVRCLRCGISGNATPHMRRGPDGPRTLCNACGIAYRKGKMRRM 104
>AK066317:Os07g0615900 | Length = 732 Score = 49.3 bits (116), Expect = 5e-06 Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = +1 Query: 202 GRMCCVECRTT--TTPMWRSGPTGPRTLCNACGIRYRKKRRQEL 327 G + C+ C + TP R GP GPRTLCNACGI YRK + + + Sbjct: 61 GHVRCLRCGISGNATPHMRRGPDGPRTLCNACGIAYRKGKMRRM 104
>Os06g0698900:Os06g0698900 | Length = 369 Score = 47.4 bits (111), Expect = 2e-05 Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 2/96 (2%) Frame = +1 Query: 31 YSLSSHIRFFKRKEQSKXXXXXXXXXKITAEQTIRPAPPMDSSHHKVIGVAPAVAEGGRM 210 YS+ + ++ + + + T+E T P S V G P+ AE Sbjct: 251 YSVRKEVALRMQRNRGQFTSSKPKGDEATSELTASDGSPNWGS---VEGRPPSAAE---- 303 Query: 211 CCVEC--RTTTTPMWRSGPTGPRTLCNACGIRYRKK 312 C C TPM R GP GPRTLCNACG+ + K Sbjct: 304 -CHHCGINAKATPMMRRGPDGPRTLCNACGLMWANK 338
>AK070729:Os04g0544500 | Length = 450 Score = 47.0 bits (110), Expect = 3e-05 Identities = 18/33 (54%), Positives = 22/33 (66%) Frame = +1 Query: 214 CVECRTTTTPMWRSGPTGPRTLCNACGIRYRKK 312 C C T+TP+WR+GP LCNACG R+R K Sbjct: 7 CRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTK 39
>AK068931:Os02g0148500 | Length = 328 Score = 45.4 bits (106), Expect = 7e-05 Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Frame = +1 Query: 169 VIGVAPAVAEGGRMCCVEC--RTTTTPMWRSGPTGPRTLCNACGIRYRKK 312 V G P+ AE C C +TPM R GP GPRTLCNACG+ + K Sbjct: 226 VEGRPPSAAE-----CHHCGISAASTPMMRRGPDGPRTLCNACGLMWANK 270
>AK105025:Os03g0684000 | Length = 319 Score = 43.5 bits (101), Expect = 3e-04 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 2/35 (5%) Frame = +1 Query: 214 CVECRTTT--TPMWRSGPTGPRTLCNACGIRYRKK 312 C C T+ TP R GP GPRTLCNACG+ + K Sbjct: 215 CQNCGTSEKMTPAMRRGPAGPRTLCNACGLMWANK 249
>Os01g0976800:Os01g0976800 | Length = 126 Score = 42.0 bits (97), Expect = 8e-04 Identities = 17/23 (73%), Positives = 21/23 (91%) Frame = +1 Query: 271 RTLCNACGIRYRKKRRQELGLDN 339 ++LCNACGIRYRK+RR LGLD+ Sbjct: 27 QSLCNACGIRYRKRRRAALGLDS 49
>Os03g0734900:Os03g0734900 | Length = 308 Score = 40.4 bits (93), Expect = 0.002 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%) Frame = +1 Query: 214 CVECRTTT--TPMWRSGPTGPRTLCNACGIRYRKK 312 C C ++ TP R GP GPR+LCNACG+ + K Sbjct: 203 CQNCGISSRLTPAMRRGPAGPRSLCNACGLMWANK 237
>AK110234: | Length = 1243 Score = 40.4 bits (93), Expect = 0.002 Identities = 16/28 (57%), Positives = 19/28 (67%) Frame = +1 Query: 214 CVECRTTTTPMWRSGPTGPRTLCNACGI 297 C C TT TP+WR P G + LCNACG+ Sbjct: 1096 CSNCHTTKTPLWRRDPEG-QPLCNACGL 1122
>AK101197:Os03g0181600 | Length = 461 Score = 40.4 bits (93), Expect = 0.002 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 8/46 (17%) Frame = +1 Query: 196 EGGRMC------CVEC--RTTTTPMWRSGPTGPRTLCNACGIRYRK 309 +GGR+ C+ C TP R GP G RTLCNACGI + K Sbjct: 18 DGGRVTVDELTRCLRCGISANATPHMRRGPEGRRTLCNACGIAWAK 63
>AK067807:Os03g0181600 | Length = 732 Score = 40.4 bits (93), Expect = 0.002 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 8/46 (17%) Frame = +1 Query: 196 EGGRMC------CVEC--RTTTTPMWRSGPTGPRTLCNACGIRYRK 309 +GGR+ C+ C TP R GP G RTLCNACGI + K Sbjct: 18 DGGRVTVDELTRCLRCGISANATPHMRRGPEGRRTLCNACGIAWAK 63
>AK110796:Os01g0899700 | Length = 412 Score = 33.5 bits (75), Expect = 0.29 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = -3 Query: 912 FFPLRSKHFPPRASSLSVSNATH*HDPRPTAQVDPNTKSSPPTSHRHDQP 763 F P FPP + + H P P PN+ +PPTS+ H P Sbjct: 212 FSPPPFNKFPPPSHQYPSPPQSSYHSPPPYQYTPPNSYQAPPTSYNHPPP 261
>AK103362:Os03g0157300 | Length = 418 Score = 29.3 bits (64), Expect = 5.6 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Frame = -3 Query: 987 GKIKTNSGLITVEPTTTNNIQPLTSFFPLRSKHFPPRASSLSVSNATH*HDPRPTAQVDP 808 G+ + L+ V T ++I P P S+ + +S +A HD P Q D Sbjct: 213 GQCEVIQHLLGVTKTVASSI-PEKCATPKVSEKADSNHTKVSEDSAKTYHDDSPKKQKDA 271 Query: 807 NT--KSSPPTSHRHD 769 T +SSPP+S+ HD Sbjct: 272 CTAPRSSPPSSYGHD 286
>AK063160:Os03g0157300 | Length = 418 Score = 29.3 bits (64), Expect = 5.6 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Frame = -3 Query: 987 GKIKTNSGLITVEPTTTNNIQPLTSFFPLRSKHFPPRASSLSVSNATH*HDPRPTAQVDP 808 G+ + L+ V T ++I P P S+ + +S +A HD P Q D Sbjct: 213 GQCEVIQHLLGVTKTVASSI-PEKCATPKVSEKADSNHTKVSEDSAKTYHDDSPKKQKDA 271 Query: 807 NT--KSSPPTSHRHD 769 T +SSPP+S+ HD Sbjct: 272 CTAPRSSPPSSYGHD 286
>AK121351:Os03g0815200 | Length = 594 Score = 28.9 bits (63), Expect = 7.2 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Frame = -1 Query: 791 PPHHIDMINPKETSFPCCSILITHLRNLY-DWFGIT 687 PPH D F C L+ H+R Y D+FGIT Sbjct: 114 PPHGQDKFVQVAGGFACALDLVQHIRAKYGDYFGIT 149
>AK111195:Os03g0173700 | Length = 704 Score = 28.9 bits (63), Expect = 7.2 Identities = 18/62 (29%), Positives = 28/62 (45%) Frame = -3 Query: 933 NIQPLTSFFPLRSKHFPPRASSLSVSNATH*HDPRPTAQVDPNTKSSPPTSHRHDQPERD 754 ++ P++S + LR+ A + N DPR TA P + T H ++Q E D Sbjct: 521 SLSPVSSTYGLRNTAGYHMAQTCCFEN-----DPRATANTTPRHPENQFTQHGYEQREND 575 Query: 753 II 748 I Sbjct: 576 FI 577
>AK101770:Os01g0851300 | Length = 67 Score = 28.9 bits (63), Expect = 7.2 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 304 CTGSRRRCKASSAPSARCATWEWWWCG 224 C+ R RC ASSA A W W CG Sbjct: 9 CSAPRDRCTASSA----AAPWRMWCCG 31
>AK101161:Os03g0173700 | Length = 704 Score = 28.9 bits (63), Expect = 7.2 Identities = 18/62 (29%), Positives = 28/62 (45%) Frame = -3 Query: 933 NIQPLTSFFPLRSKHFPPRASSLSVSNATH*HDPRPTAQVDPNTKSSPPTSHRHDQPERD 754 ++ P++S + LR+ A + N DPR TA P + T H ++Q E D Sbjct: 521 SLSPVSSTYGLRNTAGYHMAQTCCFEN-----DPRATANTTPRHPENQFTQHGYEQREND 575 Query: 753 II 748 I Sbjct: 576 FI 577
>Os03g0636700:Os03g0636700 | Length = 447 Score = 28.5 bits (62), Expect = 9.5 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +2 Query: 548 WRRLHSCSWPCPPHLHPHYCMADGP 622 W H+ PC PH HPH+ D P Sbjct: 297 WHHHHASDAPCKPH-HPHHGNGDHP 320
>AK100965:Os08g0526100 | Length = 478 Score = 28.5 bits (62), Expect = 9.5 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = +1 Query: 154 SSHHKVIGVAPAVAEGGRMCCVECRTTTTPMWRSG----PTGPRTLCNA-CGIRYRKKRR 318 SSH ++G + AVA GG E R + P G TG A C + R + Sbjct: 89 SSHRSLLGSSAAVAYGGAAWEKEVRRSAAPRRDGGLSVLVTGAAGFVGAHCSLALRARGD 148 Query: 319 QELGLDN 339 +GLDN Sbjct: 149 GVVGLDN 155
>AK067373:Os04g0669200 | Length = 190 Score = 28.5 bits (62), Expect = 9.5 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = +1 Query: 145 PMDSSHHKVIGVAPAVAEGGRMCCVECRTTTTPMWRSGPTGPRTLCNACGIRYRKKRR 318 P+ S H+ + G A A A + C ++T SGP GPR A + R+ R Sbjct: 77 PLPSPHYHLPGKAAAAAPP--VAGPACSASSTVESSSGPRGPRPAATAAAVPRRRVPR 132
>AK065792:Os02g0323600 | Length = 504 Score = 28.5 bits (62), Expect = 9.5 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +1 Query: 112 ITAEQTIRPAPPMDSSHHKVIGVAPAVAEGG 204 + AE+T +P PP ++ ++G+ PAV G Sbjct: 32 LPAEKTSKPRPPPEAKGAPLVGIIPAVLRRG 62 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 30,677,627 Number of extensions: 767518 Number of successful extensions: 2778 Number of sequences better than 10.0: 39 Number of HSP's gapped: 2757 Number of HSP's successfully gapped: 41 Length of query: 388 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 285 Effective length of database: 11,275,632 Effective search space: 3213555120 Effective search space used: 3213555120 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
