Clone Name | FLbaf89p11 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_001056043.1| Oryza sativa (japonica cultivar-group) Os03g0240500 (Os03g0240500) mRNA, complete cds Length = 1406 Score = 954 bits (481), Expect = 0.0 Identities = 856/981 (87%) Strand = Plus / Plus Query: 109 ggcggcgccgataccccgtgagtgggttggtctgcagcagttcccggcggccacccagac 168 |||||||||||||||||| |||||||| || ||||||||||| |||||||| |||||||| Sbjct: 212 ggcggcgccgataccccgcgagtgggtggggctgcagcagtttccggcggctacccagac 271 Query: 169 caagctgcatgagctcctcggcaagctcaaggaggagaatgtgagcacattgacgattct 228 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 272 caagctgcacgagctcctcggcaagctcaaggaggagaatgtgagcacattgacaattct 331 Query: 229 ggtgatggggaagggcggtgtggggaagtcatccactgtcaactccattgtcggggagag 288 |||||||||||||||||| ||||||||||||||||| ||||||||||| || || ||||| Sbjct: 332 ggtgatggggaagggcggggtggggaagtcatccaccgtcaactccatcgttggcgagag 391 Query: 289 ggtcgcaaacgtcagcgcgttccagtctgagggtctgatgccaatgatgtgctcccgcac 348 |||||| | |||||||| |||||||| |||||||| | ||| |||||||| || ||||| Sbjct: 392 ggtcgctactgtcagcgccttccagtccgagggtctcaggccgatgatgtgttctcgcac 451 Query: 349 cagggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggtatat 408 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct: 452 cagggcaggcttcaccttgaacattattgacactcctgggctcattgaaggtggatacat 511 Query: 409 caatgagcaggctgttgagatcataaagaggtttcttctggagaagactattgatgtcct 468 ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 512 caatgagcaggctgttgagatcataaaaaggtttcttctgggcaagactattgatgtcct 571 Query: 469 cctgtacgttgatcgtttggatacatatagaatggatacattggatgaacaagttataag 528 ||| || || ||||| |||||| |||| |||||||| || |||||||| |||||||| || Sbjct: 572 cctttatgtggatcgattggatgcatacagaatggacacgttggatgatcaagttattag 631 Query: 529 agccatcactagttcacttgggaaggccatttggagaagaaccttggttgtattgaccca 588 ||| |||| | |||| |||| |||||||||||| ||||||| ||||||||||| || || Sbjct: 632 agctgtcaccaattcatttggaaaggccatttggcgaagaacattggttgtattaacaca 691 Query: 589 tgcccaactctccccacctgatggaatcgactataatgatttccttgcaagaagatcaga 648 ||| || ||||| |||||||||||| | |||||||| |||||| || ||| |||||| || Sbjct: 692 tgctcagctctcaccacctgatggacttgactataacgatttctttacaaaaagatctga 751 Query: 649 gtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaatatgcggattt 708 ||| ||| ||||||| || ||| ||||||||||| || ||||| ||||| || |||||| Sbjct: 752 gtcacttttgcgatacattcgtgctggtgcaggagtcagcaaacgagaacttggggattt 811 Query: 709 tcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaatggggc 768 |||||||||||| || |||| |||||||||||||||||||| |||||||||||||| | Sbjct: 812 tcccttgccaattgcattggtggagaacagtggaaggtgcaaaactaatgagaatggaga 871 Query: 769 gaagattcttcctgatggaactccatggattccaaacttgatgaaagaaatcactatcgt 828 |||| |||| ||||||||||||||||||||||| |||||||||||||| || |||| || Sbjct: 872 gaaggttctccctgatggaactccatggattccgaacttgatgaaagagattactactgt 931 Query: 829 tgtctcaaatggaagcaggtccattcatgttgatcagaagttaatcgacggtccaaatcc 888 ||||||||| || |||| ||||||||||||||||| ||| |||| || ||||||||||| Sbjct: 932 tgtctcaaacgggagcaaatccattcatgttgatcaaaagctaatagatggtccaaatcc 991 Query: 889 gaacaatcgctggaagaagtacatacctctcatccttgctgtgcagtacttttttgtggt 948 |||||||||||||||| || |||||| ||||||||| ||| |||||||||| || || Sbjct: 992 caacaatcgctggaagatgttcataccgctcatccttatggtggagtactttttggttgt 1051 Query: 949 aaaaggaatcaggagggcgattcattctgacatttcgaacgggaagctggatgactggga 1008 |||||| ||| | ||||| |||||| ||||||| || ||||||||||| ||||||||||| Sbjct: 1052 aaaaggcatccgaagggccattcatgctgacatatcaaacgggaagctagatgactggga 1111 Query: 1009 gcagcgttatagagatctggttggaagcggtaacccggtagaccaaaaagtttcgtcatc 1068 |||||||| ||||| ||||||||||| ||||||||||||| |||| ||| ||||| Sbjct: 1112 acagcgttacagagacttggttggaagcaaggacccggtagaccagaaaggttcatcatc 1171 Query: 1069 ccgcaaccctaaggcctgagc 1089 | |||||| ||||| ||||| Sbjct: 1172 cggcaaccgcaaggcttgagc 1192
>dbj|AK099032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128A13, full insert sequence Length = 1321 Score = 954 bits (481), Expect = 0.0 Identities = 856/981 (87%) Strand = Plus / Plus Query: 109 ggcggcgccgataccccgtgagtgggttggtctgcagcagttcccggcggccacccagac 168 |||||||||||||||||| |||||||| || ||||||||||| |||||||| |||||||| Sbjct: 135 ggcggcgccgataccccgcgagtgggtggggctgcagcagtttccggcggctacccagac 194 Query: 169 caagctgcatgagctcctcggcaagctcaaggaggagaatgtgagcacattgacgattct 228 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 195 caagctgcacgagctcctcggcaagctcaaggaggagaatgtgagcacattgacaattct 254 Query: 229 ggtgatggggaagggcggtgtggggaagtcatccactgtcaactccattgtcggggagag 288 |||||||||||||||||| ||||||||||||||||| ||||||||||| || || ||||| Sbjct: 255 ggtgatggggaagggcggggtggggaagtcatccaccgtcaactccatcgttggcgagag 314 Query: 289 ggtcgcaaacgtcagcgcgttccagtctgagggtctgatgccaatgatgtgctcccgcac 348 |||||| | |||||||| |||||||| |||||||| | ||| |||||||| || ||||| Sbjct: 315 ggtcgctactgtcagcgccttccagtccgagggtctcaggccgatgatgtgttctcgcac 374 Query: 349 cagggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggtatat 408 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct: 375 cagggcaggcttcaccttgaacattattgacactcctgggctcattgaaggtggatacat 434 Query: 409 caatgagcaggctgttgagatcataaagaggtttcttctggagaagactattgatgtcct 468 ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 435 caatgagcaggctgttgagatcataaaaaggtttcttctgggcaagactattgatgtcct 494 Query: 469 cctgtacgttgatcgtttggatacatatagaatggatacattggatgaacaagttataag 528 ||| || || ||||| |||||| |||| |||||||| || |||||||| |||||||| || Sbjct: 495 cctttatgtggatcgattggatgcatacagaatggacacgttggatgatcaagttattag 554 Query: 529 agccatcactagttcacttgggaaggccatttggagaagaaccttggttgtattgaccca 588 ||| |||| | |||| |||| |||||||||||| ||||||| ||||||||||| || || Sbjct: 555 agctgtcaccaattcatttggaaaggccatttggcgaagaacattggttgtattaacaca 614 Query: 589 tgcccaactctccccacctgatggaatcgactataatgatttccttgcaagaagatcaga 648 ||| || ||||| |||||||||||| | |||||||| |||||| || ||| |||||| || Sbjct: 615 tgctcagctctcaccacctgatggacttgactataacgatttctttacaaaaagatctga 674 Query: 649 gtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaatatgcggattt 708 ||| ||| ||||||| || ||| ||||||||||| || ||||| ||||| || |||||| Sbjct: 675 gtcacttttgcgatacattcgtgctggtgcaggagtcagcaaacgagaacttggggattt 734 Query: 709 tcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaatggggc 768 |||||||||||| || |||| |||||||||||||||||||| |||||||||||||| | Sbjct: 735 tcccttgccaattgcattggtggagaacagtggaaggtgcaaaactaatgagaatggaga 794 Query: 769 gaagattcttcctgatggaactccatggattccaaacttgatgaaagaaatcactatcgt 828 |||| |||| ||||||||||||||||||||||| |||||||||||||| || |||| || Sbjct: 795 gaaggttctccctgatggaactccatggattccgaacttgatgaaagagattactactgt 854 Query: 829 tgtctcaaatggaagcaggtccattcatgttgatcagaagttaatcgacggtccaaatcc 888 ||||||||| || |||| ||||||||||||||||| ||| |||| || ||||||||||| Sbjct: 855 tgtctcaaacgggagcaaatccattcatgttgatcaaaagctaatagatggtccaaatcc 914 Query: 889 gaacaatcgctggaagaagtacatacctctcatccttgctgtgcagtacttttttgtggt 948 |||||||||||||||| || |||||| ||||||||| ||| |||||||||| || || Sbjct: 915 caacaatcgctggaagatgttcataccgctcatccttatggtggagtactttttggttgt 974 Query: 949 aaaaggaatcaggagggcgattcattctgacatttcgaacgggaagctggatgactggga 1008 |||||| ||| | ||||| |||||| ||||||| || ||||||||||| ||||||||||| Sbjct: 975 aaaaggcatccgaagggccattcatgctgacatatcaaacgggaagctagatgactggga 1034 Query: 1009 gcagcgttatagagatctggttggaagcggtaacccggtagaccaaaaagtttcgtcatc 1068 |||||||| ||||| ||||||||||| ||||||||||||| |||| ||| ||||| Sbjct: 1035 acagcgttacagagacttggttggaagcaaggacccggtagaccagaaaggttcatcatc 1094 Query: 1069 ccgcaaccctaaggcctgagc 1089 | |||||| ||||| ||||| Sbjct: 1095 cggcaaccgcaaggcttgagc 1115
>dbj|AK058676.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H08, full insert sequence Length = 1406 Score = 938 bits (473), Expect = 0.0 Identities = 854/981 (87%) Strand = Plus / Plus Query: 109 ggcggcgccgataccccgtgagtgggttggtctgcagcagttcccggcggccacccagac 168 |||||||||||||||||| |||||||| || ||||||||||| |||||||| |||||||| Sbjct: 212 ggcggcgccgataccccgcgagtgggtggggctgcagcagtttccggcggctacccagac 271 Query: 169 caagctgcatgagctcctcggcaagctcaaggaggagaatgtgagcacattgacgattct 228 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 272 caagctgcacgagctcctcggcaagctcaaggaggagaatgtgagcacattgacaattct 331 Query: 229 ggtgatggggaagggcggtgtggggaagtcatccactgtcaactccattgtcggggagag 288 |||||||||||||||||| ||||||||||||||||| ||||||||||| || || ||||| Sbjct: 332 ggtgatggggaagggcggggtggggaagtcatccaccgtcaactccatcgttggcgagag 391 Query: 289 ggtcgcaaacgtcagcgcgttccagtctgagggtctgatgccaatgatgtgctcccgcac 348 |||||| | |||||||| |||||||| |||||||| | ||| |||||||| || ||||| Sbjct: 392 ggtcgctactgtcagcgccttccagtccgagggtctcaggccgatgatgtgttctcgcac 451 Query: 349 cagggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggtatat 408 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || | Sbjct: 452 cagggcaggcttcaccttgaacattattgacactcctgggctcattgaaggtggatacac 511 Query: 409 caatgagcaggctgttgagatcataaagaggtttcttctggagaagactattgatgtcct 468 ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| Sbjct: 512 caatgagcaggctgttgagatcataaaaaggtttcttctgggcaagactatcgatgtcct 571 Query: 469 cctgtacgttgatcgtttggatacatatagaatggatacattggatgaacaagttataag 528 ||| || || ||||| |||||| |||| |||||||| || |||||||| |||||||| || Sbjct: 572 cctttatgtggatcgattggatgcatacagaatggacacgttggatgatcaagttattag 631 Query: 529 agccatcactagttcacttgggaaggccatttggagaagaaccttggttgtattgaccca 588 ||| |||| | |||| |||| |||||||||||| ||||||| ||||||||||| || || Sbjct: 632 agctgtcaccaattcatttggaaaggccatttggcgaagaacattggttgtattaacaca 691 Query: 589 tgcccaactctccccacctgatggaatcgactataatgatttccttgcaagaagatcaga 648 ||| || ||||| |||||||||||| | |||||||| |||||| || ||| |||||| || Sbjct: 692 tgctcagctctcaccacctgatggacttgactataacgatttctttacaaaaagatctga 751 Query: 649 gtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaatatgcggattt 708 ||| ||| ||||||| || ||| ||||||||||| || ||||| ||||| || |||||| Sbjct: 752 gtcacttttgcgatacattcgtgctggtgcaggagtcagcaaacgagaacttggggattt 811 Query: 709 tcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaatggggc 768 |||||||||||| || |||| |||||||||||||||||||| |||||||||||||| | Sbjct: 812 tcccttgccaattgcattggtggagaacagtggaaggtgcaaaactaatgagaatggaga 871 Query: 769 gaagattcttcctgatggaactccatggattccaaacttgatgaaagaaatcactatcgt 828 |||| |||| ||||||||||||||||||||||| |||||||||||||| || |||| || Sbjct: 872 gaaggttctccctgatggaactccatggattccgaacttgatgaaagagattactactgt 931 Query: 829 tgtctcaaatggaagcaggtccattcatgttgatcagaagttaatcgacggtccaaatcc 888 ||||||||| || |||| ||||||||||||||||| ||| |||| || ||||||||||| Sbjct: 932 tgtctcaaacgggagcaaatccattcatgttgatcaaaagctaatagatggtccaaatcc 991 Query: 889 gaacaatcgctggaagaagtacatacctctcatccttgctgtgcagtacttttttgtggt 948 |||||||||||||||| || |||||| ||||||||| ||| |||||||||| || || Sbjct: 992 caacaatcgctggaagatgttcataccgctcatccttatggtggagtactttttggttgt 1051 Query: 949 aaaaggaatcaggagggcgattcattctgacatttcgaacgggaagctggatgactggga 1008 |||||| ||| | ||||| |||||| ||||||| || ||||||||||| ||||||||||| Sbjct: 1052 aaaaggcatccgaagggccattcatgctgacatatcaaacgggaagctagatgactggga 1111 Query: 1009 gcagcgttatagagatctggttggaagcggtaacccggtagaccaaaaagtttcgtcatc 1068 |||||||| ||||| ||||||||||| ||||||||||||| |||| ||| ||||| Sbjct: 1112 acagcgttacagagacttggttggaagcaaggacccggtagaccagaaaggttcatcatc 1171 Query: 1069 ccgcaaccctaaggcctgagc 1089 | |||||| ||||| ||||| Sbjct: 1172 cggcaaccgcaaggcttgagc 1192
>gb|AY107292.1| Zea mays PCO067487 mRNA sequence Length = 1391 Score = 856 bits (432), Expect = 0.0 Identities = 792/912 (86%) Strand = Plus / Plus Query: 106 gatggcggcgccgataccccgtgagtgggttggtctgcagcagttcccggcggccaccca 165 ||||||| |||| ||||| || |||||||| || ||||||||||| || |||||||||| Sbjct: 175 gatggcgtcgccaataccgcgcgagtgggtcgggctgcagcagtttcctccggccaccca 234 Query: 166 gaccaagctgcatgagctcctcggcaagctcaaggaggagaatgtgagcacattgacgat 225 |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 235 gaccgagctgcacgagctcctcggcaagctcaaggaggaggatgtgagcacattgacaat 294 Query: 226 tctggtgatggggaagggcggtgtggggaagtcatccactgtcaactccattgtcgggga 285 ||||||||||||||| ||||| |||||||||||||| ||||| |||||||| |||||||| Sbjct: 295 tctggtgatggggaaaggcggagtggggaagtcatctactgttaactccatcgtcgggga 354 Query: 286 gagggtcgcaaacgtcagcgcgttccagtctgagggtctgatgccaatgatgtgctcccg 345 |||| |||| | |||||||| ||||||||||||||||||| || |||||||| || || Sbjct: 355 gaggatcgccactgtcagcgctttccagtctgagggtctgagaccgatgatgtggtcgcg 414 Query: 346 caccagggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggta 405 ||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 415 cacaagggcagggttcaccttgaacattatcgacactcctgggcttattgaaggtggata 474 Query: 406 tatcaatgagcaggctgttgagatcataaagaggtttcttctggagaagactattgatgt 465 || ||||||||||| ||||| ||||| ||||| |||||||| | |||||||||||||| Sbjct: 475 cattaatgagcaggccgttgacatcattaagagatttcttctaggcaagactattgatgt 534 Query: 466 cctcctgtacgttgatcgtttggatacatatagaatggatacattggatgaacaagttat 525 ||||||||||| |||||||||||| | ||||||||||||||| |||||||||| ||||| Sbjct: 535 tctcctgtacgtggatcgtttggatgcgtatagaatggatacactggatgaacaggttat 594 Query: 526 aagagccatcactagttcacttgggaaggccatttggagaagaaccttggttgtattgac 585 |||||||||||| | |||| |||| || | |||||| ||||| | |||||||| ||||| Sbjct: 595 aagagccatcaccaattcatttggaaaagatatttggcgaagatcattggttgtgttgac 654 Query: 586 ccatgcccaactctccccacctgatggaatcgactataatgatttccttgcaagaagatc 645 |||||| |||||||| |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 655 ccatgctcaactctcaccacctgatggaatcgactataatgatttctttacaagaagatc 714 Query: 646 agagtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaatatgcgga 705 |||| | ||| ||||||| |||| || || ||||||||| ||| ||||||||| ||| Sbjct: 715 agaggcacttttgcgatacatccactcgggagcaggaatcaagaaacgagaatatgggga 774 Query: 706 ttttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaatgg 765 ||| || ||||||||||| |||| ||||||||||||||||||||||||||| ||| |||| Sbjct: 775 tttccctttgccaatagcattggtagagaacagtggaaggtgcaagactaacgagcatgg 834 Query: 766 ggcgaagattcttcctgatggaactccatggattccaaacttgatgaaagaaatcactat 825 || |||||| ||||| ||||||||||| ||| ||||||| ||||||||||||| ||| | Sbjct: 835 ggagaagatacttccggatggaactccgtgggttccaaaactgatgaaagaaattactgt 894 Query: 826 cgttgtctcaaatggaagcaggtccattcatgttgatcagaagttaatcgacggtccaaa 885 ||| ||||||| || |||| | ||||||||||||||||||||||||| || |||||||| Sbjct: 895 tgttatctcaaacgggagcaagcccattcatgttgatcagaagttaattgatggtccaaa 954 Query: 886 tccgaacaatcgctggaagaagtacatacctctcatccttgctgtgcagtacttttttgt 945 || |||||||||||||||| || |||||| | || ||||||||| ||||||| || || Sbjct: 955 ccctaacaatcgctggaagatgttcataccaattatacttgctgtggagtacttcttggt 1014 Query: 946 ggtaaaaggaatcaggagggcgattcattctgacatttcgaacgggaagctggatgactg 1005 |||||||||||| |||||||||| ||| | || || | || |||||| |||||||||| Sbjct: 1015 agtaaaaggaatccggagggcgatccatgcagatatcgcaaatgggaaggtggatgactg 1074 Query: 1006 ggagcagcgtta 1017 |||||||||||| Sbjct: 1075 ggagcagcgtta 1086
>emb|AJ271049.1|ZMA271049 Zea mays mRNA for Toc34-2 protein (toc34B gene) Length = 1313 Score = 833 bits (420), Expect = 0.0 Identities = 789/912 (86%) Strand = Plus / Plus Query: 106 gatggcggcgccgataccccgtgagtgggttggtctgcagcagttcccggcggccaccca 165 ||||||| |||||||||| || |||||||| || ||||||||||| |||||||| || || Sbjct: 132 gatggcgtcgccgataccgcgcgagtgggtcgggctgcagcagtttccggcggctacaca 191 Query: 166 gaccaagctgcatgagctcctcggcaagctcaaggaggagaatgtgagcacattgacgat 225 |||||||||||| || ||||||||||| |||||||||||| ||||||||||||| || || Sbjct: 192 gaccaagctgcacgaactcctcggcaaactcaaggaggaggatgtgagcacattaacaat 251 Query: 226 tctggtgatggggaagggcggtgtggggaagtcatccactgtcaactccattgtcgggga 285 ||||||||||||||| || || |||||||||||||||||||| |||||||| || ||||| Sbjct: 252 tctggtgatggggaaaggtggagtggggaagtcatccactgttaactccatcgttgggga 311 Query: 286 gagggtcgcaaacgtcagcgcgttccagtctgagggtctgatgccaatgatgtgctcccg 345 |||||| || |||||||| ||||||||||||||||||| |||||||||||||| || Sbjct: 312 gagggttgcctctgtcagcgctttccagtctgagggtctgagaccaatgatgtgctcgcg 371 Query: 346 caccagggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggta 405 ||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 372 cacaagggcagggttcactttgaacattatcgacactcctgggcttattgaaggtggata 431 Query: 406 tatcaatgagcaggctgttgagatcataaagaggtttcttctggagaagactattgatgt 465 || ||||||||||| ||||| ||||| ||||| |||||||| | |||||||| ||||| Sbjct: 432 cattaatgagcaggccgttgacatcattaagagatttcttctaggcaagactatcgatgt 491 Query: 466 cctcctgtacgttgatcgtttggatacatatagaatggatacattggatgaacaagttat 525 ||||||||||| |||||||||||| | ||||||||||||||| |||||||||| ||||| Sbjct: 492 tctcctgtacgtggatcgtttggatgcgtatagaatggatacactggatgaacaggttat 551 Query: 526 aagagccatcactagttcacttgggaaggccatttggagaagaaccttggttgtattgac 585 |||||||||||| | |||| |||| || | |||||| ||||| | |||||||| ||||| Sbjct: 552 aagagccatcaccaattcatttggaaaagatatttggcgaagatcattggttgtgttgac 611 Query: 586 ccatgcccaactctccccacctgatggaatcgactataatgatttccttgcaagaagatc 645 |||||| |||||||| |||||||||||||||||||||||||||||| || |||||||||| Sbjct: 612 ccatgctcaactctcaccacctgatggaatcgactataatgatttctttacaagaagatc 671 Query: 646 agagtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaatatgcgga 705 |||| | ||| ||||||| |||| || || ||||||||| |||| ||||||||| ||| Sbjct: 672 agaggcacttttgcgatacatccactcaggagcaggaatcaacaaacgagaatatgggga 731 Query: 706 ttttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaatgg 765 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||| |||| Sbjct: 732 tttccccttgccaatagcattggtggagaacagtggaaggtgcaagactaatgagcatgg 791 Query: 766 ggcgaagattcttcctgatggaactccatggattccaaacttgatgaaagaaatcactat 825 || |||||| ||||| || ||||||| ||| |||||||| ||||||||||||| ||| | Sbjct: 792 ggagaagatacttccggacggaactctgtgggttccaaacctgatgaaagaaattactgt 851 Query: 826 cgttgtctcaaatggaagcaggtccattcatgttgatcagaagttaatcgacggtccaaa 885 || ||||||| || ||||| ||||||||||||||||||||||||| || |||||||| Sbjct: 852 tgtcatctcaaacgggagcagtcccattcatgttgatcagaagttaattgatggtccaaa 911 Query: 886 tccgaacaatcgctggaagaagtacatacctctcatccttgctgtgcagtacttttttgt 945 || ||||||||| | ||| || |||||| || |||||||||||| ||||||| || || Sbjct: 912 ccctaacaatcgccgaaagttgttcataccacttatccttgctgtggagtacttcttggt 971 Query: 946 ggtaaaaggaatcaggagggcgattcattctgacatttcgaacgggaagctggatgactg 1005 ||||||||||||| |||||||||| ||| | || || | ||||||||| | |||||||| Sbjct: 972 ggtaaaaggaatccggagggcgatccatgcagatatcgcaaacgggaaggtagatgactg 1031 Query: 1006 ggagcagcgtta 1017 |||||||||||| Sbjct: 1032 ggagcagcgtta 1043
>emb|AJ245968.2|ZMA245968 Zea mays mRNA for Toc34-1 protein (toc34A gene) Length = 1233 Score = 825 bits (416), Expect = 0.0 Identities = 788/912 (86%) Strand = Plus / Plus Query: 106 gatggcggcgccgataccccgtgagtgggttggtctgcagcagttcccggcggccaccca 165 ||||||| |||| ||||| || |||||||| || ||||||||||| || |||||||||| Sbjct: 86 gatggcgtcgccaataccgcgcgagtgggtcgggctgcagcagtttcctccggccaccca 145 Query: 166 gaccaagctgcatgagctcctcggcaagctcaaggaggagaatgtgagcacattgacgat 225 |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 146 gaccgagctgcacgagctcctcggcaagctcaaggaggaggatgtgagcacattgacaat 205 Query: 226 tctggtgatggggaagggcggtgtggggaagtcatccactgtcaactccattgtcgggga 285 ||||||||||||||| ||||| |||||||||||||| ||||| |||||||| |||||||| Sbjct: 206 tctggtgatggggaaaggcggagtggggaagtcatctactgttaactccatcgtcgggga 265 Query: 286 gagggtcgcaaacgtcagcgcgttccagtctgagggtctgatgccaatgatgtgctcccg 345 |||| |||| | |||||||| ||||||||||||||||||| || |||||||| || || Sbjct: 266 gaggatcgccactgtcagcgctttccagtctgagggtctgagaccgatgatgtggtcgcg 325 Query: 346 caccagggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggta 405 ||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 326 cacaagggcagggttcaccttgaacattatcgacactcctgggcttattgaaggtggata 385 Query: 406 tatcaatgagcaggctgttgagatcataaagaggtttcttctggagaagactattgatgt 465 || ||||||||||||||||| ||||| ||||| |||||||||| |||||||||||||| Sbjct: 386 cattaatgagcaggctgttgacatcattaagagatttcttctgggcaagactattgatgt 445 Query: 466 cctcctgtacgttgatcgtttggatacatatagaatggatacattggatgaacaagttat 525 |||||||| || |||||||||||| | || |||||||||||| | |||| ||| ||||| Sbjct: 446 tctcctgtatgtggatcgtttggatgcgtacagaatggatacacttgatggacaggttat 505 Query: 526 aagagccatcactagttcacttgggaaggccatttggagaagaaccttggttgtattgac 585 |||||||||||| | |||| |||| || | |||||| ||||| | |||||||| ||||| Sbjct: 506 aagagccatcaccaattcatttggaaaagatatttggcgaagatcattggttgtgttgac 565 Query: 586 ccatgcccaactctccccacctgatggaatcgactataatgatttccttgcaagaagatc 645 |||||| |||||||| ||||||||||||||||| |||||||||||| || ||||||| || Sbjct: 566 ccatgctcaactctcaccacctgatggaatcgagtataatgatttctttacaagaaggtc 625 Query: 646 agagtcgcttgtgcgatatatccgttctggtgcaggaatcggcaaaagagaatatgcgga 705 |||| | ||| ||||||| |||| || || ||||||||| ||| ||||||||| ||| Sbjct: 626 agaggcacttttgcgatacatccactcgggagcaggaatcaagaaacgagaatatgggga 685 Query: 706 ttttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaatgg 765 ||| || ||||||||||| |||| ||||||||||||||||||||||||||| ||| |||| Sbjct: 686 tttccctttgccaatagcattggtagagaacagtggaaggtgcaagactaacgagcatgg 745 Query: 766 ggcgaagattcttcctgatggaactccatggattccaaacttgatgaaagaaatcactat 825 || |||||| ||||| ||||||||||| ||| ||||||| ||||||||||||| ||| | Sbjct: 746 ggagaagatacttccggatggaactccgtgggttccaaaactgatgaaagaaattactgt 805 Query: 826 cgttgtctcaaatggaagcaggtccattcatgttgatcagaagttaatcgacggtccaaa 885 ||| ||||||| || |||| | ||||||||||||||||||||||||| || |||||||| Sbjct: 806 tgttatctcaaacgggagcaagcccattcatgttgatcagaagttaattgatggtccaaa 865 Query: 886 tccgaacaatcgctggaagaagtacatacctctcatccttgctgtgcagtacttttttgt 945 || |||||||||||||||| || |||||| | || ||||||||| ||||||| || || Sbjct: 866 ccctaacaatcgctggaagatgttcataccaattatacttgctgtggagtacttcttggt 925 Query: 946 ggtaaaaggaatcaggagggcgattcattctgacatttcgaacgggaagctggatgactg 1005 |||||||||||| |||||||||| ||| | || || | || |||||| |||||||||| Sbjct: 926 agtaaaaggaatccggagggcgatccatgcagatatcgcaaatgggaaggtggatgactg 985 Query: 1006 ggagcagcgtta 1017 |||||||||||| Sbjct: 986 ggagcagcgtta 997
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 200 bits (101), Expect = 1e-47 Identities = 221/261 (84%) Strand = Plus / Minus Query: 437 aggtttcttctggagaagactattgatgtcctcctgtacgttgatcgtttggatacatat 496 ||||||||||||| |||||||||||||||||||| || || ||||| |||||| |||| Sbjct: 44318 aggtttcttctgggcaagactattgatgtcctcctttatgtggatcgattggatgcatac 44259 Query: 497 agaatggatacattggatgaacaagttataagagccatcactagttcacttgggaaggcc 556 |||||||| || |||||||| |||||||| ||||| |||| | |||| |||| |||||| Sbjct: 44258 agaatggacacgttggatgatcaagttattagagctgtcaccaattcatttggaaaggcc 44199 Query: 557 atttggagaagaaccttggttgtattgacccatgcccaactctccccacctgatggaatc 616 |||||| ||||||| ||||||||||| || ||||| || ||||| |||||||||||| | Sbjct: 44198 atttggcgaagaacattggttgtattaacacatgctcagctctcaccacctgatggactt 44139 Query: 617 gactataatgatttccttgcaagaagatcagagtcgcttgtgcgatatatccgttctggt 676 |||||||| |||||| || ||| |||||| ||||| ||| ||||||| || ||| ||||| Sbjct: 44138 gactataacgatttctttacaaaaagatctgagtcacttttgcgatacattcgtgctggt 44079 Query: 677 gcaggaatcggcaaaagagaa 697 |||||| || ||||| ||||| Sbjct: 44078 gcaggagtcagcaaacgagaa 44058 Score = 170 bits (86), Expect = 9e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 311 cagtctgagggtctgatgccaatgatgtgctcccgcaccagggcaggattcaccttgaac 370 ||||| |||||||| | ||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 45460 cagtccgagggtctcaggccgatgatgtgttctcgcaccagggcaggcttcaccttgaac 45401 Query: 371 attatcgacactcctgggctcattgaaggtgggtatatcaatgagcaggctgttgagatc 430 ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 45400 attattgacactcctgggctcattgaaggtggatacatcaatgagcaggctgttgagatc 45341 Query: 431 ataaagaggt 440 ||||| |||| Sbjct: 45340 ataaaaaggt 45331 Score = 159 bits (80), Expect = 3e-35 Identities = 134/152 (88%) Strand = Plus / Minus Query: 774 ttcttcctgatggaactccatggattccaaacttgatgaaagaaatcactatcgttgtct 833 |||| ||||||||||||||||||||||| |||||||||||||| || |||| ||||||| Sbjct: 42842 ttctccctgatggaactccatggattccgaacttgatgaaagagattactactgttgtct 42783 Query: 834 caaatggaagcaggtccattcatgttgatcagaagttaatcgacggtccaaatccgaaca 893 |||| || |||| ||||||||||||||||| ||| |||| || ||||||||||| |||| Sbjct: 42782 caaacgggagcaaatccattcatgttgatcaaaagctaatagatggtccaaatcccaaca 42723 Query: 894 atcgctggaagaagtacatacctctcatcctt 925 |||||||||||| || |||||| ||||||||| Sbjct: 42722 atcgctggaagatgttcataccgctcatcctt 42691 Score = 145 bits (73), Expect = 5e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 109 ggcggcgccgataccccgtgagtgggttggtctgcagcagttcccggcggccacccagac 168 |||||||||||||||||| |||||||| || ||||||||||| |||||||| |||||||| Sbjct: 45918 ggcggcgccgataccccgcgagtgggtggggctgcagcagtttccggcggctacccagac 45859 Query: 169 caagctgcatgagctcctcggcaagctcaaggaggag 205 ||||||||| ||||||||||||||||||||||||||| Sbjct: 45858 caagctgcacgagctcctcggcaagctcaaggaggag 45822 Score = 139 bits (70), Expect = 3e-29 Identities = 100/110 (90%) Strand = Plus / Minus Query: 204 agaatgtgagcacattgacgattctggtgatggggaagggcggtgtggggaagtcatcca 263 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 45655 agaatgtgagcacattgacaattctggtgatggggaagggcggggtggggaagtcatcca 45596 Query: 264 ctgtcaactccattgtcggggagagggtcgcaaacgtcagcgcgttccag 313 | ||||||||||| || || ||||||||||| | |||||||| |||||| Sbjct: 45595 ccgtcaactccatcgttggcgagagggtcgctactgtcagcgccttccag 45546 Score = 115 bits (58), Expect = 5e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 932 cagtacttttttgtggtaaaaggaatcaggagggcgattcattctgacatttcgaacggg 991 ||||||||||| || |||||||| ||| | ||||| |||||| ||||||| || |||||| Sbjct: 42583 cagtactttttggttgtaaaaggcatccgaagggccattcatgctgacatatcaaacggg 42524 Query: 992 aagctggatgactgggagcagcgttatagagatctggttggaagcggtaacccggtagac 1051 ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 42523 aagctagatgactgggaacagcgttacagagacttggttggaagcaaggacccggtagac 42464 Query: 1052 caaaaagtttcgtcatcccgcaaccctaaggcctgagc 1089 || |||| ||| |||||| |||||| ||||| ||||| Sbjct: 42463 cagaaaggttcatcatccggcaaccgcaaggcttgagc 42426 Score = 85.7 bits (43), Expect = 4e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 703 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 762 |||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||| Sbjct: 43000 ggattttcccttgccaattgcattggtggagaacagtggaaggtgcaaaactaatgagaa 42941 Query: 763 tgg 765 ||| Sbjct: 42940 tgg 42938
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 200 bits (101), Expect = 1e-47 Identities = 221/261 (84%) Strand = Plus / Minus Query: 437 aggtttcttctggagaagactattgatgtcctcctgtacgttgatcgtttggatacatat 496 ||||||||||||| |||||||||||||||||||| || || ||||| |||||| |||| Sbjct: 7403598 aggtttcttctgggcaagactattgatgtcctcctttatgtggatcgattggatgcatac 7403539 Query: 497 agaatggatacattggatgaacaagttataagagccatcactagttcacttgggaaggcc 556 |||||||| || |||||||| |||||||| ||||| |||| | |||| |||| |||||| Sbjct: 7403538 agaatggacacgttggatgatcaagttattagagctgtcaccaattcatttggaaaggcc 7403479 Query: 557 atttggagaagaaccttggttgtattgacccatgcccaactctccccacctgatggaatc 616 |||||| ||||||| ||||||||||| || ||||| || ||||| |||||||||||| | Sbjct: 7403478 atttggcgaagaacattggttgtattaacacatgctcagctctcaccacctgatggactt 7403419 Query: 617 gactataatgatttccttgcaagaagatcagagtcgcttgtgcgatatatccgttctggt 676 |||||||| |||||| || ||| |||||| ||||| ||| ||||||| || ||| ||||| Sbjct: 7403418 gactataacgatttctttacaaaaagatctgagtcacttttgcgatacattcgtgctggt 7403359 Query: 677 gcaggaatcggcaaaagagaa 697 |||||| || ||||| ||||| Sbjct: 7403358 gcaggagtcagcaaacgagaa 7403338 Score = 170 bits (86), Expect = 9e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 311 cagtctgagggtctgatgccaatgatgtgctcccgcaccagggcaggattcaccttgaac 370 ||||| |||||||| | ||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 7404740 cagtccgagggtctcaggccgatgatgtgttctcgcaccagggcaggcttcaccttgaac 7404681 Query: 371 attatcgacactcctgggctcattgaaggtgggtatatcaatgagcaggctgttgagatc 430 ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 7404680 attattgacactcctgggctcattgaaggtggatacatcaatgagcaggctgttgagatc 7404621 Query: 431 ataaagaggt 440 ||||| |||| Sbjct: 7404620 ataaaaaggt 7404611 Score = 159 bits (80), Expect = 3e-35 Identities = 134/152 (88%) Strand = Plus / Minus Query: 774 ttcttcctgatggaactccatggattccaaacttgatgaaagaaatcactatcgttgtct 833 |||| ||||||||||||||||||||||| |||||||||||||| || |||| ||||||| Sbjct: 7402122 ttctccctgatggaactccatggattccgaacttgatgaaagagattactactgttgtct 7402063 Query: 834 caaatggaagcaggtccattcatgttgatcagaagttaatcgacggtccaaatccgaaca 893 |||| || |||| ||||||||||||||||| ||| |||| || ||||||||||| |||| Sbjct: 7402062 caaacgggagcaaatccattcatgttgatcaaaagctaatagatggtccaaatcccaaca 7402003 Query: 894 atcgctggaagaagtacatacctctcatcctt 925 |||||||||||| || |||||| ||||||||| Sbjct: 7402002 atcgctggaagatgttcataccgctcatcctt 7401971 Score = 145 bits (73), Expect = 5e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 109 ggcggcgccgataccccgtgagtgggttggtctgcagcagttcccggcggccacccagac 168 |||||||||||||||||| |||||||| || ||||||||||| |||||||| |||||||| Sbjct: 7405198 ggcggcgccgataccccgcgagtgggtggggctgcagcagtttccggcggctacccagac 7405139 Query: 169 caagctgcatgagctcctcggcaagctcaaggaggag 205 ||||||||| ||||||||||||||||||||||||||| Sbjct: 7405138 caagctgcacgagctcctcggcaagctcaaggaggag 7405102 Score = 139 bits (70), Expect = 3e-29 Identities = 100/110 (90%) Strand = Plus / Minus Query: 204 agaatgtgagcacattgacgattctggtgatggggaagggcggtgtggggaagtcatcca 263 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 7404935 agaatgtgagcacattgacaattctggtgatggggaagggcggggtggggaagtcatcca 7404876 Query: 264 ctgtcaactccattgtcggggagagggtcgcaaacgtcagcgcgttccag 313 | ||||||||||| || || ||||||||||| | |||||||| |||||| Sbjct: 7404875 ccgtcaactccatcgttggcgagagggtcgctactgtcagcgccttccag 7404826 Score = 115 bits (58), Expect = 5e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 932 cagtacttttttgtggtaaaaggaatcaggagggcgattcattctgacatttcgaacggg 991 ||||||||||| || |||||||| ||| | ||||| |||||| ||||||| || |||||| Sbjct: 7401863 cagtactttttggttgtaaaaggcatccgaagggccattcatgctgacatatcaaacggg 7401804 Query: 992 aagctggatgactgggagcagcgttatagagatctggttggaagcggtaacccggtagac 1051 ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 7401803 aagctagatgactgggaacagcgttacagagacttggttggaagcaaggacccggtagac 7401744 Query: 1052 caaaaagtttcgtcatcccgcaaccctaaggcctgagc 1089 || |||| ||| |||||| |||||| ||||| ||||| Sbjct: 7401743 cagaaaggttcatcatccggcaaccgcaaggcttgagc 7401706 Score = 85.7 bits (43), Expect = 4e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 703 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 762 |||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||| Sbjct: 7402280 ggattttcccttgccaattgcattggtggagaacagtggaaggtgcaaaactaatgagaa 7402221 Query: 763 tgg 765 ||| Sbjct: 7402220 tgg 7402218
>gb|DQ228327.1| Solanum tuberosum clone 135F10 GTP-binding-like protein mRNA, complete cds Length = 1129 Score = 83.8 bits (42), Expect = 2e-12 Identities = 126/154 (81%) Strand = Plus / Plus Query: 351 gggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggtatatca 410 |||||| ||| || ||||||||||||||||| || ||||| ||||||| || ||| ||| Sbjct: 260 gggcagaatttacattgaacattatcgacacccccgggctggttgaaggaggatatgtca 319 Query: 411 atgagcaggctgttgagatcataaagaggtttcttctggagaagactattgatgtcctcc 470 |||| |||||| |||| ||||||||||||| || ||| | ||||| |||||||| | | Sbjct: 320 atgaccaggctcttgatctcataaagaggttcctcctgaacaagacaattgatgttttgc 379 Query: 471 tgtacgttgatcgtttggatacatatagaatgga 504 | || || |||||| | |||||||||||| |||| Sbjct: 380 tctatgtggatcgtcttgatacatatagagtgga 413
>gb|BT014489.1| Lycopersicon esculentum clone 133849F, mRNA sequence Length = 1430 Score = 79.8 bits (40), Expect = 3e-11 Identities = 121/148 (81%) Strand = Plus / Plus Query: 351 gggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggtatatca 410 |||||| ||| || ||||||||||||||||| || ||||| ||||||| || ||| ||| Sbjct: 308 gggcagaatttacattgaacattatcgacacccccgggctggttgaaggaggatatgtca 367 Query: 411 atgagcaggctgttgagatcataaagaggtttcttctggagaagactattgatgtcctcc 470 |||| |||||| |||| ||||||||||||| || ||| | ||||| |||||||| | | Sbjct: 368 atgaccaggctcttgatctcataaagaggttcctcctgaacaagacaattgatgttttgc 427 Query: 471 tgtacgttgatcgtttggatacatatag 498 | || || |||||| | ||||||||||| Sbjct: 428 tttatgtggatcgtcttgatacatatag 455
>ref|NM_001071000.1| Oryza sativa (japonica cultivar-group) Os10g0372100 (Os10g0372100) mRNA, complete cds Length = 3629 Score = 75.8 bits (38), Expect = 4e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 703 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 762 ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| | Sbjct: 2837 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaaaactaatgagca 2896 Query: 763 tggggcgaag 772 ||||| |||| Sbjct: 2897 tggggagaag 2906
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 75.8 bits (38), Expect = 4e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 703 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 762 ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| | Sbjct: 77365 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaaaactaatgagca 77306 Query: 763 tggggcgaag 772 ||||| |||| Sbjct: 77305 tggggagaag 77296
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 75.8 bits (38), Expect = 4e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 703 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 762 ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| | Sbjct: 97078 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaaaactaatgagca 97137 Query: 763 tggggcgaag 772 ||||| |||| Sbjct: 97138 tggggagaag 97147
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 75.8 bits (38), Expect = 4e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 703 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 762 ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| | Sbjct: 11269377 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaaaactaatgagca 11269318 Query: 763 tggggcgaag 772 ||||| |||| Sbjct: 11269317 tggggagaag 11269308
>dbj|AK069144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005J09, full insert sequence Length = 3631 Score = 75.8 bits (38), Expect = 4e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 703 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 762 ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| | Sbjct: 2839 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaaaactaatgagca 2898 Query: 763 tggggcgaag 772 ||||| |||| Sbjct: 2899 tggggagaag 2908
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 67.9 bits (34), Expect = 1e-07 Identities = 61/70 (87%) Strand = Plus / Minus Query: 703 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 762 ||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| | Sbjct: 9723887 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaaaactaatgacca 9723828 Query: 763 tggggcgaag 772 ||||| |||| Sbjct: 9723827 tggggagaag 9723818
>dbj|AP005123.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1015H11 Length = 156897 Score = 67.9 bits (34), Expect = 1e-07 Identities = 61/70 (87%) Strand = Plus / Minus Query: 703 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatgagaa 762 ||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| | Sbjct: 121367 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaaaactaatgacca 121308 Query: 763 tggggcgaag 772 ||||| |||| Sbjct: 121307 tggggagaag 121298
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 65.9 bits (33), Expect = 4e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 703 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatga 759 ||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| Sbjct: 14704812 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaaaactaatga 14704868
>emb|Z28341.1|PSCLOEP P.sativum (miranda) mRNA for chloroplast outer envelope protein 34 Length = 1303 Score = 65.9 bits (33), Expect = 4e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 350 agggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggtatatc 409 |||||||| || || ||||||||||||||||||||||| || |||||||| || || ||| Sbjct: 320 agggcaggttttacattgaacattatcgacactcctggtcttattgaagggggatacatc 379 Query: 410 aatga 414 ||||| Sbjct: 380 aatga 384
>gb|L36856.1|PEAIAP34A Pisum sativum GTP-binding protein (IAP34) mRNA, complete cds Length = 1322 Score = 65.9 bits (33), Expect = 4e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 350 agggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggtatatc 409 |||||||| || || ||||||||||||||||||||||| || |||||||| || || ||| Sbjct: 347 agggcaggttttacattgaacattatcgacactcctggtcttattgaagggggatacatc 406 Query: 410 aatga 414 ||||| Sbjct: 407 aatga 411
>emb|AL954159.4|CNS08CCX Oryza sativa chromosome 12, . BAC OSJNBa0057C04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131673 Score = 65.9 bits (33), Expect = 4e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 703 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatga 759 ||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| Sbjct: 39273 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaaaactaatga 39217
>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133207 Score = 65.9 bits (33), Expect = 4e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 703 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaagactaatga 759 ||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| Sbjct: 113987 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaaaactaatga 113931
>gb|AC149134.2| Medicago truncatula, complete sequence Length = 133336 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 365 ttgaacattatcgacactcctgggctcattgaaggtgggtatatcaatga 414 |||||||||||||| |||||||| || |||||||| ||||| |||||||| Sbjct: 114273 ttgaacattatcgatactcctggtcttattgaaggggggtacatcaatga 114224
>gb|AC189527.1| Brassica rapa subsp. pekinensis clone KBrB092L06, complete sequence Length = 126922 Score = 50.1 bits (25), Expect = 0.023 Identities = 37/41 (90%) Strand = Plus / Minus Query: 233 atggggaagggcggtgtggggaagtcatccactgtcaactc 273 ||||| || ||||||||||| || ||||||||||||||||| Sbjct: 2105 atgggcaaaggcggtgtgggaaaatcatccactgtcaactc 2065
>gb|DQ486738.1| Brassica napus chloroplast TOC33-like protein gene, 5' UTR and partial cds; nuclear gene for chloroplast product Length = 613 Score = 50.1 bits (25), Expect = 0.023 Identities = 37/41 (90%) Strand = Plus / Plus Query: 233 atggggaagggcggtgtggggaagtcatccactgtcaactc 273 ||||| || ||||||||||| || ||||||||||||||||| Sbjct: 323 atgggcaaaggcggtgtgggaaaatcatccactgtcaactc 363
>gb|AY369784.1| Brassica napus TOC33-like protein gene, complete cds; nuclear gene for chloroplast product Length = 1490 Score = 50.1 bits (25), Expect = 0.023 Identities = 37/41 (90%) Strand = Plus / Plus Query: 233 atggggaagggcggtgtggggaagtcatccactgtcaactc 273 ||||| || ||||||||||| || ||||||||||||||||| Sbjct: 206 atgggcaaaggcggtgtgggaaaatcatccactgtcaactc 246
>gb|AY332619.1| Brassica napus TOC33 (Toc33) mRNA, complete cds; nuclear gene for chloroplast product Length = 894 Score = 50.1 bits (25), Expect = 0.023 Identities = 37/41 (90%) Strand = Plus / Plus Query: 233 atggggaagggcggtgtggggaagtcatccactgtcaactc 273 ||||| || ||||||||||| || ||||||||||||||||| Sbjct: 124 atgggcaaaggcggtgtgggaaaatcatccactgtcaactc 164
>gb|AY325803.1| Brassica napus TOC33 (Toc33) mRNA, complete cds Length = 894 Score = 50.1 bits (25), Expect = 0.023 Identities = 37/41 (90%) Strand = Plus / Plus Query: 233 atggggaagggcggtgtggggaagtcatccactgtcaactc 273 ||||| || ||||||||||| || ||||||||||||||||| Sbjct: 124 atgggcaaaggcggtgtgggaaaatcatccactgtcaactc 164
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Minus Query: 183 tcctcggcaagctcaaggaggag 205 ||||||||||||||||||||||| Sbjct: 231474 tcctcggcaagctcaaggaggag 231452
>emb|CR855111.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0209H04, complete sequence Length = 89787 Score = 44.1 bits (22), Expect = 1.4 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 703 ggattttcccttgccaatagctttggcagaga-acagtggaaggtgcaagactaatga 759 |||||| |||||||||||||| |||| |||| | ||||||||||| || |||||||| Sbjct: 17777 ggatttccccttgccaatagcattggtggagataaagtggaaggtggaaaactaatga 17720
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.4 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 703 ggattttcccttgccaatagctttggcagaga-acagtggaaggtgcaagactaatga 759 |||||| |||||||||||||| |||| |||| | ||||||||||| || |||||||| Sbjct: 19679002 ggatttccccttgccaatagcattggtggagataaagtggaaggtggaaaactaatga 19678945
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.4 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 703 ggattttcccttgccaatagctttggcagaga-acagtggaaggtgcaagactaatga 759 |||||| |||||||||||||| |||| |||| | ||||||||||| || |||||||| Sbjct: 10338317 ggatttccccttgccaatagcattggtggagataaagtggaaggtggaaaactaatga 10338374
>gb|AC091602.6| Homo sapiens BAC clone RP11-655M19 from 4, complete sequence Length = 189458 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1273 gcaattttgcaaatgttattgt 1294 |||||||||||||||||||||| Sbjct: 71571 gcaattttgcaaatgttattgt 71550
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 gggcggtgatggcggcgccgat 120 |||||||||||||||||||||| Sbjct: 35381 gggcggtgatggcggcgccgat 35360
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 44.1 bits (22), Expect = 1.4 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 703 ggattttcccttgccaatagctttggcagaga-acagtggaaggtgcaagactaatga 759 |||||| |||||||||||||| |||| |||| | ||||||||||| || |||||||| Sbjct: 45037 ggatttccccttgccaatagcattggtggagataaagtggaaggtggaaaactaatga 45094
>gb|AC093533.2| Homo sapiens chromosome 5 clone RP11-46C20, complete sequence Length = 154814 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1402 cattattttttattcaaaatat 1423 |||||||||||||||||||||| Sbjct: 39323 cattattttttattcaaaatat 39302
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 44.1 bits (22), Expect = 1.4 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 703 ggattttcccttgccaatagctttggcagaga-acagtggaaggtgcaagactaatga 759 |||||| |||||||||||||| |||| |||| | ||||||||||| || |||||||| Sbjct: 129728 ggatttccccttgccaatagcattggtggagataaagtggaaggtggaaaactaatga 129671
>gb|CP000419.1| Streptococcus thermophilus LMD-9, complete genome Length = 1856368 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1391 aattgcctaaccattattttt 1411 ||||||||||||||||||||| Sbjct: 967074 aattgcctaaccattattttt 967054
>gb|DQ397347.1| Uncultured archaeon clone 02N1AC4 16S ribosomal RNA gene, partial sequence Length = 1090 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 cgtcagcgcgttccagtctga 318 ||||||||||||||||||||| Sbjct: 569 cgtcagcgcgttccagtctga 549
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 106 gatggcggcgccgataccccgtgag 130 |||||||||||||||||| |||||| Sbjct: 130417 gatggcggcgccgataccgcgtgag 130393
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1391 aattgcctaaccattattttt 1411 ||||||||||||||||||||| Sbjct: 952090 aattgcctaaccattattttt 952070
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 574 ggttgtattgacccatgccca 594 ||||||||||||||||||||| Sbjct: 2113379 ggttgtattgacccatgccca 2113359
>gb|AY377856.1| Brassica napus TOC33 (Toc33) gene, complete cds; nuclear gene for chloroplast product Length = 1376 Score = 42.1 bits (21), Expect = 5.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 233 atggggaagggcggtgtggggaagtcatccactgtcaactc 273 ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 202 atgggtaaaggcggtgtgggaaaatcatcgactgtcaactc 242
>emb|AL603908.3| Human DNA sequence from clone RP11-331O9 on chromosome 6 Contains a cytochrome c oxidase II (MTCO2) pseudogene, an ATP synthase 8 (MTATP8) pseudogene, an ATP synthase 6 (MTATP6) pseudogene, a cytochrome c oxidase III (MTCO3) pseudogene, an NADH dehydrogenase 3 (MTND3) pseudogene, an NADH dehydrogenase 4L (NADH dehydrogenase, subunit 4L (complex I)) (MTND4L) pseudogene and an NADH dehydrogenase 4 (NADH dehydrogenase, subunit 4 (complex I)) (MTND4) pseudogene, complete sequence Length = 92896 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 798 ttccaaacttgatgaaagaaatcac 822 ||||||||||||||||||| ||||| Sbjct: 1117 ttccaaacttgatgaaagacatcac 1093
>emb|AL391426.9| Human DNA sequence from clone RP11-461F2 on chromosome 6, complete sequence Length = 27736 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 798 ttccaaacttgatgaaagaaatcac 822 ||||||||||||||||||| ||||| Sbjct: 26853 ttccaaacttgatgaaagacatcac 26829
>ref|NM_001007833.1| Gallus gallus nucleotide binding protein 2 (MinD homolog, E. coli) (NUBP2), mRNA emb|AJ719980.1| Gallus gallus mRNA for hypothetical protein, clone 9a23 Length = 1663 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 gggaagggcggtgtggggaag 256 ||||||||||||||||||||| Sbjct: 92 gggaagggcggtgtggggaag 112
>emb|BX855617.8| Zebrafish DNA sequence from clone DKEYP-123H10 in linkage group 1, complete sequence Length = 160094 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 957 tcaggagggcgattcattctgacat 981 |||||||||| |||||||||||||| Sbjct: 120782 tcaggagggctattcattctgacat 120806
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 ggcggtgatggcggcgccgat 120 ||||||||||||||||||||| Sbjct: 734051 ggcggtgatggcggcgccgat 734031
>dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clone:RP13-259F12, complete sequence Length = 167444 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1137 ttcctgtgctgttcttttgtt 1157 ||||||||||||||||||||| Sbjct: 37464 ttcctgtgctgttcttttgtt 37484
>emb|AL590443.1|CNS07EGA chromosome III of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 194439 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 732 agaacagtggaaggtgcaaga 752 ||||||||||||||||||||| Sbjct: 92614 agaacagtggaaggtgcaaga 92634
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1404 ttattttttattcaaaatatc 1424 ||||||||||||||||||||| Sbjct: 47905 ttattttttattcaaaatatc 47925
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1391 aattgcctaaccattattttt 1411 ||||||||||||||||||||| Sbjct: 946084 aattgcctaaccattattttt 946064 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 260,595,184 Number of extensions: 13702510 Number of successful extensions: 298322 Number of sequences better than 10.0: 52 Number of HSP's gapped: 298308 Number of HSP's successfully gapped: 64 Length of query: 1460 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1437 Effective length of database: 18,503,978,556 Effective search space: 26590217184972 Effective search space used: 26590217184972 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)