Clone Name | FLbaf89o15 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Q89BP0:FMT_BRAJA Methionyl-tRNA formyltransferase - Bradyrhizobi... | 37 | 0.29 | 2 | P30606:ITR2_YEAST Myo-inositol transporter 2 - Saccharomyces cer... | 33 | 7.2 | 3 | Q940S5:COPZ1_ARATH Coatomer subunit zeta-1 - Arabidopsis thalian... | 33 | 7.2 |
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>Q89BP0:FMT_BRAJA Methionyl-tRNA formyltransferase - Bradyrhizobium japonicum| Length = 311 Score = 37.4 bits (85), Expect = 0.29 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +3 Query: 567 IADVVTSSNLFDVLSSTSGGRLPFPVYDKYLAGLDRAFKKMKTQSESSLLSGFRSQRGER 746 I D +T+++L D LS RL + + +A LDR ++K QSE + + + E Sbjct: 158 ITDTMTAADLHDRLS-----RLGADLMVRAMAALDRGGLQLKKQSEDGVTYAAKIDKAE- 211 Query: 747 VLEVDGTLTTQPVLEHV-GISTWPG 818 +D T + VL H+ G+S +PG Sbjct: 212 -ARIDWTKPARAVLRHIHGLSPFPG 235
>P30606:ITR2_YEAST Myo-inositol transporter 2 - Saccharomyces cerevisiae (Baker's yeast)| Length = 609 Score = 32.7 bits (73), Expect = 7.2 Identities = 30/118 (25%), Positives = 54/118 (45%) Frame = +3 Query: 1569 LSPVSELWRLLVSLALWDEPLKSFVFCLVSSSIIIRGWVVYFLVMVILLSAMVMLLTRLT 1748 L+ V WR+LV L+L L+ FC + + Y+++ L A ++L Sbjct: 261 LNHVKNGWRILVGLSLIPTVLQFSFFCFLPDT------PRYYVMKGDLKRAKMVLKRSYV 314 Query: 1749 SQGKPMTEVKVTSPPSMNTMEQLLAVQNAISKVEELVQDANIVLLKIRALLLAFPSQA 1922 + + + KV S+N Q + +N I+K +V++ + V RAL++ QA Sbjct: 315 NTEDEIIDQKVEELSSLN---QSIPGKNPITKFWNMVKELHTVPSNFRALIIGCGLQA 369
>Q940S5:COPZ1_ARATH Coatomer subunit zeta-1 - Arabidopsis thaliana (Mouse-ear cress)| Length = 177 Score = 32.7 bits (73), Expect = 7.2 Identities = 24/112 (21%), Positives = 58/112 (51%), Gaps = 6/112 (5%) Frame = +3 Query: 1035 HSRRDYWLAIISEVLYVHRFVRK--FDISGVDKEEIILKASLGILRLQAIEELAFPASNR 1208 ++R + + + + V++FV+ F ++G ++E ++ AS+ A+ L ++ Sbjct: 50 NARTEVEVTALENNIVVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDK 109 Query: 1209 YESL----LLFNLCDKLPGGDVILETLASTISSRSSAQANQPGTSIGMRSMS 1352 E+L L+F D++ G ++LET A+ I+ ++ + P + +++S Sbjct: 110 REALDNLDLIFLSFDEIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTIS 161 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 404,796,208 Number of extensions: 8595638 Number of successful extensions: 23870 Number of sequences better than 10.0: 3 Number of HSP's gapped: 23858 Number of HSP's successfully gapped: 3 Length of query: 804 Length of database: 100,686,439 Length adjustment: 121 Effective length of query: 683 Effective length of database: 67,496,744 Effective search space: 46100276152 Effective search space used: 46100276152 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)