No.
Definition
Score (bits)
E Value
1 ref|NM_001070621.1| Oryza sativa (japonica cultivar-group) Os10g...
1578
0.0
2 dbj|AK072882.1| Oryza sativa (japonica cultivar-group) cDNA clon...
1578
0.0
3 emb|CT832073.1| Oryza sativa (indica cultivar-group) cDNA clone:...
1562
0.0
4 ref|NM_001061578.1| Oryza sativa (japonica cultivar-group) Os05g...
1459
0.0
5 gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome...
494
e-136
6 gb|AC025098.5| Oryza sativa (japonica cultivar-group) chromosome...
494
e-136
7 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
494
e-136
8 gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare str...
470
e-128
9 gb|AC137607.2| Oryza sativa (japonica cultivar-group) chromosome...
470
e-128
10 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
470
e-128
11 gb|AY107143.1| Zea mays PCO129484 mRNA sequence
270
2e-68
12 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
157
2e-34
13 dbj|AP005778.3| Oryza sativa (japonica cultivar-group) genomic D...
157
2e-34
14 dbj|AP005011.3| Oryza sativa (japonica cultivar-group) genomic D...
157
2e-34
15 ref|NM_001060799.1| Oryza sativa (japonica cultivar-group) Os04g...
52
0.010
16 emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...
52
0.010
17 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
52
0.010
18 emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4,...
52
0.010
19 dbj|AK069563.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.010
20 emb|CR847843.7| Zebrafish DNA sequence from clone RP71-50C18 in ...
48
0.15
21 gb|AC102333.10| Mus musculus chromosome 18, clone RP24-542P12, c...
46
0.59
22 gb|AC161175.5| Mus musculus chromosome 18, clone RP23-2J13, comp...
46
0.59
23 dbj|AP004371.2| Homo sapiens genomic DNA, chromosome 11q, clone:...
46
0.59
24 ref|XM_420968.2| PREDICTED: Gallus gallus Ctr9, Paf1/RNA polymer...
44
2.3
25 gb|AC190411.2| Gallus gallus BAC clone CH261-19B3 from chromosom...
44
2.3
26 gb|AC189496.1| Brassica rapa subsp. pekinensis clone KBrB086C10,...
44
2.3
27 gb|AC159804.18| Glycine max clone gmp1-34b24, complete sequence
44
2.3
28 emb|AL133409.14| Human DNA sequence from clone RP13-448I11 on ch...
44
2.3
29 gb|AC010905.3|AC010905 Homo sapiens BAC clone RP11-560B8 from Y,...
44
2.3
30 gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
44
2.3
31 gb|AC068644.15| Homo sapiens 3 BAC RP11-315J22 (Roswell Park Can...
44
2.3
32 gb|AC187595.2| Gallus gallus BAC clone CH261-69P10 from chromoso...
42
9.2
33 gb|AC186205.3| Canis Familiaris chromosome 7, clone XX-293N13, c...
42
9.2
34 gb|AC123656.9| Mus musculus chromosome 15, clone RP23-188M21, co...
42
9.2
35 gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, com...
42
9.2
36 gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, co...
42
9.2
37 gb|AF339883.1|AF339883 Rhodobacter sphaeroides nitrite reductase...
42
9.2
38 emb|AL627447.12| Human DNA sequence from clone RP11-619F23 on ch...
42
9.2
39 ref|NM_144860.2| Mus musculus mindbomb homolog 1 (Drosophila) (M...
42
9.2
40 gb|AC008064.2| Homo sapiens BAC clone RP11-178E24 from 2, comple...
42
9.2
41 gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, co...
42
9.2
42 emb|AJ412874.1|ISP412874 Isorineloricaria spinosissima 18S rRNA ...
42
9.2
>gb|AC145127.1 | Oryza sativa (japonica cultivar-group) chromosome 10 clone
Pseudo10p0.0-10p4.4, complete sequence
Length = 2331000
Score = 494 bits (249), Expect = e-136
Identities = 489/569 (85%)
Strand = Plus / Minus
Query: 995 aacagaaccagtgatcatagaatttccagagctggccgggcactctcgccgtgattactg 1054
||||||||||||||||||||||||||||||| |||| || |||| ||| ||||| || ||
Sbjct: 1714672 aacagaaccagtgatcatagaatttccagagttggctggccactttcgtcgtgactattg 1714613
Query: 1055 gttggcaattatatctgaagttctttatgttcacaggtttgttagaaagttcgacataag 1114
| |||| || ||||| ||| |||| ||||| ||||| |||||||| ||||| ||||||||
Sbjct: 1714612 gctggccatcatatcagaaattctctatgtccacagatttgttaggaagtttgacataag 1714553
Query: 1115 tggagttgataaagaggaaataattctgaaggcttcgcttggtatcttgcggttgcaagc 1174
||||||||| |||||||||| |||| |||||||| || | || ||||| | |||||
Sbjct: 1714552 tggagttgacaaagaggaaacaattttgaaggctgtactaagcattatgcggctacaagc 1714493
Query: 1175 cattgaagaattagcctttccagcttccaatcgatacgaatctcttttgttgttcaatct 1234
|||||||| |||||| |||||| ||| ||||||| ||| ||||||||| |||| |||||
Sbjct: 1714492 tattgaagagttagccattccagtttctaatcgattcgagtctcttttgatgtttaatct 1714433
Query: 1235 ttgtgacaaacttcctggaggagatgtaatacttgaaacactagccagtactatatcatc 1294
|||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||
Sbjct: 1714432 atgtgacaaacttcccggaggtgatgtaatacttgaaacactagctggttctatatcatc 1714373
Query: 1295 aagaagttcagctcaagccaaccaaccaggcacgagcattggaatgcgttccatgtctgc 1354
||||| ||| |||||| |||||||| ||||| |||| ||||| || ||| ||||| |
Sbjct: 1714372 gagaagatcaactcaagttaaccaacctggcactagcagtggaaggcattcaatgtcccc 1714313
Query: 1355 cttcgctgtcctgtcaaacctgggcatggtatcaccaggtaataatagtgagagactctt 1414
||| |||| ||||| || || || ||||||||||| |||||| |||||||||||||
Sbjct: 1714312 ctttactgttctgtcgaatcttggagtggtatcaccaattaataaaggtgagagactctt 1714253
Query: 1415 tgttggtgagatagttgttggggaaatgagttccttgcagaaggcagttactgagtcaat 1474
|||||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 1714252 tgttggcgagatagttgttggggaaatgagtgccttgcagaaggtagttaatgagtcaat 1714193
Query: 1475 gaacaactacaagaaggttgaactggcccaagccacagttgatggagtcaaagttgatgg 1534
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1714192 gaacaactataagaaggttgaattggcccaagccacagttgatggagtcaaagttgatgg 1714133
Query: 1535 gcttgatacaaacctggtagtgatgaagg 1563
|| ||||||||| ||| |||||||||||
Sbjct: 1714132 cctggatacaaacttggcagtgatgaagg 1714104
Score = 238 bits (120), Expect = 8e-59
Identities = 162/176 (92%)
Strand = Plus / Minus
Query: 1737 acaagactaactagtcaaggaaagccaatgactgaggtcaaggtgacgtctccaccttca 1796
|||||||||||||| || ||||| |||||||| |||||||| ||||| ||||||||| ||
Sbjct: 1710407 acaagactaactagccatggaaaaccaatgacggaggtcaaagtgacatctccacctcca 1710348
Query: 1797 atgaacactatggagcagctcttagctgttcaaaatgccatttccaaagttgaagagctt 1856
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1710347 atgaacacaatggagcagctcttagctgttcaaaatgctatttccaaagttgaagagctt 1710288
Query: 1857 gtccaggatgcaaatattgttcttctgaagataagagctctactgctggcttttcc 1912
|| ||||||||||||||||||||||||||||| |||||| || || ||||||||||
Sbjct: 1710287 gttcaggatgcaaatattgttcttctgaagattagagctttattgttggcttttcc 1710232
Score = 230 bits (116), Expect = 2e-56
Identities = 188/212 (88%)
Strand = Plus / Minus
Query: 294 ctgcaatatgactttgatatgcaagcatctgactctataaagcacccaagaaactatgcg 353
||||| |||||||||||||||||||||||||| || |||||||| |||||||| |||||
Sbjct: 1717797 ctgcagtatgactttgatatgcaagcatctgattccataaagcagccaagaaattatgca 1717738
Query: 354 agaaactttttggaatattgctgctttagggcacttgcacaggtctcaccagttgcggga 413
||||| |||||||||||||| || || |||||||||||||| | ||||| |||||| ||
Sbjct: 1717737 agaaattttttggaatattgttgtttgagggcacttgcacatgcctcacaagttgcaggg 1717678
Query: 414 tatcttgctgataaaagccttcgtcgcctgacatttgatatgatgttagcttgggaagtt 473
|||||| |||| |||||| |||||||||| | |||||||||||| ||||||||||||||
Sbjct: 1717677 tatctttctgacaaaagctttcgtcgcctaaattttgatatgatgctagcttgggaagtt 1717618
Query: 474 tcctcttcttcaagccagctcactgttaaggt 505
|||||||||||||| ||||||||||||||||
Sbjct: 1717617 ccctcttcttcaagcgagctcactgttaaggt 1717586
Score = 167 bits (84), Expect = 2e-37
Identities = 152/174 (87%), Gaps = 3/174 (1%)
Strand = Plus / Minus
Query: 1975 tgcccacaagattgcttatcctggcgatgtttctggaggtgttcacgaaccactctccga 2034
|||||||||| |||||| ||||| |||||||||||||| |||||||||||||| ||
Sbjct: 1708769 tgcccacaaggttgcttgtcctgatgatgtttctggaggcattcacgaaccactccccac 1708710
Query: 2035 taaggagagcaagcacagagagatgcaccagaaggttgagagagtggtggttcagcatac 2094
|||||||||||||||||| || || ||||||||||| |||||||||||||||||||| |
Sbjct: 1708709 caaggagagcaagcacagaaaggtggaccagaaggttaagagagtggtggttcagcattc 1708650
Query: 2095 ctgcagcgccagtagtggtggagaaggataacaaagaagataagaagacaaaat 2148
||||||| |||||||| |||||||||||| |||||||| ||||| |||||||
Sbjct: 1708649 ctgcagctccagtagtcgtggagaaggat---aaagaagacaagaaaacaaaat 1708599
Score = 167 bits (84), Expect = 2e-37
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 518 cacagttagtttggaggctttctcaagaatagcacctgccattccaacaatcgctgatgt 577
|||||| ||||| |||||||| ||||||||||||||||| |||||||||||| |||||||
Sbjct: 1717410 cacagtcagtttagaggctttttcaagaatagcacctgcaattccaacaatcactgatgt 1717351
Query: 578 agtaacttcttcaaatctctttgatgtgctttcatcaacaagtggaggccgtcttccatt 637
||||| | ||||||||| |||||||| |||||||| ||||||||||||| ||| ||||
Sbjct: 1717350 ggtaacatgttcaaatctatttgatgtactttcatcttcaagtggaggccggcttacatt 1717291
Query: 638 ccctgtatacgataagtatcttgcaggattggacag 673
|||||||| |||||||| ||| |||||||||||||
Sbjct: 1717290 tcctgtatatgataagtaccttacaggattggacag 1717255
Score = 155 bits (78), Expect = 9e-34
Identities = 153/178 (85%)
Strand = Plus / Minus
Query: 814 caggaagattgacacttacggatcatgccctttactttgaagctgtaaaggttgtgacat 873
||||||| || |||||||| |||||||| |||||||| ||||| | ||||||||| |
Sbjct: 1715512 caggaaggttaacacttactgatcatgctctttacttcgaagcacttcgggttgtgacct 1715453
Query: 874 ttgataagcccaaatcttatgaacttgcagaagatgcaaagcagattgttaaacctgagc 933
||||||||| ||| ||||||| ||||| |||||| ||||||| ||||||||||||||
Sbjct: 1715452 atgataagcctaaagcttatgagcttgccgaagatctaaagcagtctgttaaacctgagc 1715393
Query: 934 tgactggcccatggggttcacggctgtttgacaaagccgtcatgtataaatcaacaac 991
||||||| |||||||| |||||||| ||||||||||| || |||||||||||||||||
Sbjct: 1715392 tgactggtccatggggctcacggctatttgacaaagctgttatgtataaatcaacaac 1715335
Score = 131 bits (66), Expect = 1e-26
Identities = 126/146 (86%)
Strand = Plus / Minus
Query: 672 agagcatttaagaaaatgaagacacagtctgagtcatcgcttctatcgggcttccgatca 731
|||||| ||||||||||||| ||| |||||||| |||||| |||| | | || ||
Sbjct: 1715776 agagcaattaagaaaatgaaaggacaatctgagtcctcgcttttatctgcccagcggtct 1715717
Query: 732 cagagaggagaaagggttctagaagtcgatggaacattgacaactcaaccagtacttgag 791
||||||||||||||| || ||||||| |||||||||||||| |||||||||||||||||
Sbjct: 1715716 cagagaggagaaaggattgtagaagtagatggaacattgacgactcaaccagtacttgaa 1715657
Query: 792 catgttgggatttcaacatggccagg 817
|||||||||||||| |||||||||||
Sbjct: 1715656 catgttgggatttcgacatggccagg 1715631
Score = 85.7 bits (43), Expect = 7e-13
Identities = 85/99 (85%)
Strand = Plus / Minus
Query: 65 gaggatggcaatgatgaggagtacgcgggatctgctgatggagggtttcgaggggctcgt 124
||||||||| ||||||| | ||||||||||||||||||||||| |||||||| |||||
Sbjct: 1718783 gaggatggcgatgatgaaccggacgcgggatctgctgatggaggggttcgagggcctcgt 1718724
Query: 125 gcgggacgggtctttcaagtggcccgtcccccgccgcgg 163
|||||| || || |||| ||| || |||||||||||||
Sbjct: 1718723 gcgggagggctccttcagctgggccctcccccgccgcgg 1718685
Score = 67.9 bits (34), Expect = 2e-07
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 223 ccggcctctcccccatggtcagcgccgtcgtctctcgctgctcccg 268
||||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 1718610 ccggcctctcccccaaggccaacgccgtcgtctctcgctgctcccg 1718565
Score = 46.1 bits (23), Expect = 0.59
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 1561 aggaattgttatcaccggttagtgagctttggaggcttttggtatcgttggcattgtggg 1620
|||||||| |||| || || |||||||| |||||| ||||||| | | |||||| ||||
Sbjct: 1713096 aggaattgctatctcccgtaagtgagctatggaggtttttggtgttgctggcatcttggg 1713037
Query: 1621 atgagcc 1627
|||||||
Sbjct: 1713036 atgagcc 1713030
>gb|AC025098.5 | Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0020E23,
complete sequence
Length = 151359
Score = 494 bits (249), Expect = e-136
Identities = 489/569 (85%)
Strand = Plus / Minus
Query: 995 aacagaaccagtgatcatagaatttccagagctggccgggcactctcgccgtgattactg 1054
||||||||||||||||||||||||||||||| |||| || |||| ||| ||||| || ||
Sbjct: 111769 aacagaaccagtgatcatagaatttccagagttggctggccactttcgtcgtgactattg 111710
Query: 1055 gttggcaattatatctgaagttctttatgttcacaggtttgttagaaagttcgacataag 1114
| |||| || ||||| ||| |||| ||||| ||||| |||||||| ||||| ||||||||
Sbjct: 111709 gctggccatcatatcagaaattctctatgtccacagatttgttaggaagtttgacataag 111650
Query: 1115 tggagttgataaagaggaaataattctgaaggcttcgcttggtatcttgcggttgcaagc 1174
||||||||| |||||||||| |||| |||||||| || | || ||||| | |||||
Sbjct: 111649 tggagttgacaaagaggaaacaattttgaaggctgtactaagcattatgcggctacaagc 111590
Query: 1175 cattgaagaattagcctttccagcttccaatcgatacgaatctcttttgttgttcaatct 1234
|||||||| |||||| |||||| ||| ||||||| ||| ||||||||| |||| |||||
Sbjct: 111589 tattgaagagttagccattccagtttctaatcgattcgagtctcttttgatgtttaatct 111530
Query: 1235 ttgtgacaaacttcctggaggagatgtaatacttgaaacactagccagtactatatcatc 1294
|||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||
Sbjct: 111529 atgtgacaaacttcccggaggtgatgtaatacttgaaacactagctggttctatatcatc 111470
Query: 1295 aagaagttcagctcaagccaaccaaccaggcacgagcattggaatgcgttccatgtctgc 1354
||||| ||| |||||| |||||||| ||||| |||| ||||| || ||| ||||| |
Sbjct: 111469 gagaagatcaactcaagttaaccaacctggcactagcagtggaaggcattcaatgtcccc 111410
Query: 1355 cttcgctgtcctgtcaaacctgggcatggtatcaccaggtaataatagtgagagactctt 1414
||| |||| ||||| || || || ||||||||||| |||||| |||||||||||||
Sbjct: 111409 ctttactgttctgtcgaatcttggagtggtatcaccaattaataaaggtgagagactctt 111350
Query: 1415 tgttggtgagatagttgttggggaaatgagttccttgcagaaggcagttactgagtcaat 1474
|||||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 111349 tgttggcgagatagttgttggggaaatgagtgccttgcagaaggtagttaatgagtcaat 111290
Query: 1475 gaacaactacaagaaggttgaactggcccaagccacagttgatggagtcaaagttgatgg 1534
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 111289 gaacaactataagaaggttgaattggcccaagccacagttgatggagtcaaagttgatgg 111230
Query: 1535 gcttgatacaaacctggtagtgatgaagg 1563
|| ||||||||| ||| |||||||||||
Sbjct: 111229 cctggatacaaacttggcagtgatgaagg 111201
Score = 238 bits (120), Expect = 8e-59
Identities = 162/176 (92%)
Strand = Plus / Minus
Query: 1737 acaagactaactagtcaaggaaagccaatgactgaggtcaaggtgacgtctccaccttca 1796
|||||||||||||| || ||||| |||||||| |||||||| ||||| ||||||||| ||
Sbjct: 107504 acaagactaactagccatggaaaaccaatgacggaggtcaaagtgacatctccacctcca 107445
Query: 1797 atgaacactatggagcagctcttagctgttcaaaatgccatttccaaagttgaagagctt 1856
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 107444 atgaacacaatggagcagctcttagctgttcaaaatgctatttccaaagttgaagagctt 107385
Query: 1857 gtccaggatgcaaatattgttcttctgaagataagagctctactgctggcttttcc 1912
|| ||||||||||||||||||||||||||||| |||||| || || ||||||||||
Sbjct: 107384 gttcaggatgcaaatattgttcttctgaagattagagctttattgttggcttttcc 107329
Score = 230 bits (116), Expect = 2e-56
Identities = 188/212 (88%)
Strand = Plus / Minus
Query: 294 ctgcaatatgactttgatatgcaagcatctgactctataaagcacccaagaaactatgcg 353
||||| |||||||||||||||||||||||||| || |||||||| |||||||| |||||
Sbjct: 114894 ctgcagtatgactttgatatgcaagcatctgattccataaagcagccaagaaattatgca 114835
Query: 354 agaaactttttggaatattgctgctttagggcacttgcacaggtctcaccagttgcggga 413
||||| |||||||||||||| || || |||||||||||||| | ||||| |||||| ||
Sbjct: 114834 agaaattttttggaatattgttgtttgagggcacttgcacatgcctcacaagttgcaggg 114775
Query: 414 tatcttgctgataaaagccttcgtcgcctgacatttgatatgatgttagcttgggaagtt 473
|||||| |||| |||||| |||||||||| | |||||||||||| ||||||||||||||
Sbjct: 114774 tatctttctgacaaaagctttcgtcgcctaaattttgatatgatgctagcttgggaagtt 114715
Query: 474 tcctcttcttcaagccagctcactgttaaggt 505
|||||||||||||| ||||||||||||||||
Sbjct: 114714 ccctcttcttcaagcgagctcactgttaaggt 114683
Score = 167 bits (84), Expect = 2e-37
Identities = 152/174 (87%), Gaps = 3/174 (1%)
Strand = Plus / Minus
Query: 1975 tgcccacaagattgcttatcctggcgatgtttctggaggtgttcacgaaccactctccga 2034
|||||||||| |||||| ||||| |||||||||||||| |||||||||||||| ||
Sbjct: 105866 tgcccacaaggttgcttgtcctgatgatgtttctggaggcattcacgaaccactccccac 105807
Query: 2035 taaggagagcaagcacagagagatgcaccagaaggttgagagagtggtggttcagcatac 2094
|||||||||||||||||| || || ||||||||||| |||||||||||||||||||| |
Sbjct: 105806 caaggagagcaagcacagaaaggtggaccagaaggttaagagagtggtggttcagcattc 105747
Query: 2095 ctgcagcgccagtagtggtggagaaggataacaaagaagataagaagacaaaat 2148
||||||| |||||||| |||||||||||| |||||||| ||||| |||||||
Sbjct: 105746 ctgcagctccagtagtcgtggagaaggat---aaagaagacaagaaaacaaaat 105696
Score = 167 bits (84), Expect = 2e-37
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 518 cacagttagtttggaggctttctcaagaatagcacctgccattccaacaatcgctgatgt 577
|||||| ||||| |||||||| ||||||||||||||||| |||||||||||| |||||||
Sbjct: 114507 cacagtcagtttagaggctttttcaagaatagcacctgcaattccaacaatcactgatgt 114448
Query: 578 agtaacttcttcaaatctctttgatgtgctttcatcaacaagtggaggccgtcttccatt 637
||||| | ||||||||| |||||||| |||||||| ||||||||||||| ||| ||||
Sbjct: 114447 ggtaacatgttcaaatctatttgatgtactttcatcttcaagtggaggccggcttacatt 114388
Query: 638 ccctgtatacgataagtatcttgcaggattggacag 673
|||||||| |||||||| ||| |||||||||||||
Sbjct: 114387 tcctgtatatgataagtaccttacaggattggacag 114352
Score = 155 bits (78), Expect = 9e-34
Identities = 153/178 (85%)
Strand = Plus / Minus
Query: 814 caggaagattgacacttacggatcatgccctttactttgaagctgtaaaggttgtgacat 873
||||||| || |||||||| |||||||| |||||||| ||||| | ||||||||| |
Sbjct: 112609 caggaaggttaacacttactgatcatgctctttacttcgaagcacttcgggttgtgacct 112550
Query: 874 ttgataagcccaaatcttatgaacttgcagaagatgcaaagcagattgttaaacctgagc 933
||||||||| ||| ||||||| ||||| |||||| ||||||| ||||||||||||||
Sbjct: 112549 atgataagcctaaagcttatgagcttgccgaagatctaaagcagtctgttaaacctgagc 112490
Query: 934 tgactggcccatggggttcacggctgtttgacaaagccgtcatgtataaatcaacaac 991
||||||| |||||||| |||||||| ||||||||||| || |||||||||||||||||
Sbjct: 112489 tgactggtccatggggctcacggctatttgacaaagctgttatgtataaatcaacaac 112432
Score = 131 bits (66), Expect = 1e-26
Identities = 126/146 (86%)
Strand = Plus / Minus
Query: 672 agagcatttaagaaaatgaagacacagtctgagtcatcgcttctatcgggcttccgatca 731
|||||| ||||||||||||| ||| |||||||| |||||| |||| | | || ||
Sbjct: 112873 agagcaattaagaaaatgaaaggacaatctgagtcctcgcttttatctgcccagcggtct 112814
Query: 732 cagagaggagaaagggttctagaagtcgatggaacattgacaactcaaccagtacttgag 791
||||||||||||||| || ||||||| |||||||||||||| |||||||||||||||||
Sbjct: 112813 cagagaggagaaaggattgtagaagtagatggaacattgacgactcaaccagtacttgaa 112754
Query: 792 catgttgggatttcaacatggccagg 817
|||||||||||||| |||||||||||
Sbjct: 112753 catgttgggatttcgacatggccagg 112728
Score = 85.7 bits (43), Expect = 7e-13
Identities = 85/99 (85%)
Strand = Plus / Minus
Query: 65 gaggatggcaatgatgaggagtacgcgggatctgctgatggagggtttcgaggggctcgt 124
||||||||| ||||||| | ||||||||||||||||||||||| |||||||| |||||
Sbjct: 115880 gaggatggcgatgatgaaccggacgcgggatctgctgatggaggggttcgagggcctcgt 115821
Query: 125 gcgggacgggtctttcaagtggcccgtcccccgccgcgg 163
|||||| || || |||| ||| || |||||||||||||
Sbjct: 115820 gcgggagggctccttcagctgggccctcccccgccgcgg 115782
Score = 67.9 bits (34), Expect = 2e-07
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 223 ccggcctctcccccatggtcagcgccgtcgtctctcgctgctcccg 268
||||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 115707 ccggcctctcccccaaggccaacgccgtcgtctctcgctgctcccg 115662
Score = 46.1 bits (23), Expect = 0.59
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 1561 aggaattgttatcaccggttagtgagctttggaggcttttggtatcgttggcattgtggg 1620
|||||||| |||| || || |||||||| |||||| ||||||| | | |||||| ||||
Sbjct: 110193 aggaattgctatctcccgtaagtgagctatggaggtttttggtgttgctggcatcttggg 110134
Query: 1621 atgagcc 1627
|||||||
Sbjct: 110133 atgagcc 110127
>dbj|AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
Length = 22685906
Score = 494 bits (249), Expect = e-136
Identities = 489/569 (85%)
Strand = Plus / Minus
Query: 995 aacagaaccagtgatcatagaatttccagagctggccgggcactctcgccgtgattactg 1054
||||||||||||||||||||||||||||||| |||| || |||| ||| ||||| || ||
Sbjct: 1714672 aacagaaccagtgatcatagaatttccagagttggctggccactttcgtcgtgactattg 1714613
Query: 1055 gttggcaattatatctgaagttctttatgttcacaggtttgttagaaagttcgacataag 1114
| |||| || ||||| ||| |||| ||||| ||||| |||||||| ||||| ||||||||
Sbjct: 1714612 gctggccatcatatcagaaattctctatgtccacagatttgttaggaagtttgacataag 1714553
Query: 1115 tggagttgataaagaggaaataattctgaaggcttcgcttggtatcttgcggttgcaagc 1174
||||||||| |||||||||| |||| |||||||| || | || ||||| | |||||
Sbjct: 1714552 tggagttgacaaagaggaaacaattttgaaggctgtactaagcattatgcggctacaagc 1714493
Query: 1175 cattgaagaattagcctttccagcttccaatcgatacgaatctcttttgttgttcaatct 1234
|||||||| |||||| |||||| ||| ||||||| ||| ||||||||| |||| |||||
Sbjct: 1714492 tattgaagagttagccattccagtttctaatcgattcgagtctcttttgatgtttaatct 1714433
Query: 1235 ttgtgacaaacttcctggaggagatgtaatacttgaaacactagccagtactatatcatc 1294
|||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||
Sbjct: 1714432 atgtgacaaacttcccggaggtgatgtaatacttgaaacactagctggttctatatcatc 1714373
Query: 1295 aagaagttcagctcaagccaaccaaccaggcacgagcattggaatgcgttccatgtctgc 1354
||||| ||| |||||| |||||||| ||||| |||| ||||| || ||| ||||| |
Sbjct: 1714372 gagaagatcaactcaagttaaccaacctggcactagcagtggaaggcattcaatgtcccc 1714313
Query: 1355 cttcgctgtcctgtcaaacctgggcatggtatcaccaggtaataatagtgagagactctt 1414
||| |||| ||||| || || || ||||||||||| |||||| |||||||||||||
Sbjct: 1714312 ctttactgttctgtcgaatcttggagtggtatcaccaattaataaaggtgagagactctt 1714253
Query: 1415 tgttggtgagatagttgttggggaaatgagttccttgcagaaggcagttactgagtcaat 1474
|||||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 1714252 tgttggcgagatagttgttggggaaatgagtgccttgcagaaggtagttaatgagtcaat 1714193
Query: 1475 gaacaactacaagaaggttgaactggcccaagccacagttgatggagtcaaagttgatgg 1534
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1714192 gaacaactataagaaggttgaattggcccaagccacagttgatggagtcaaagttgatgg 1714133
Query: 1535 gcttgatacaaacctggtagtgatgaagg 1563
|| ||||||||| ||| |||||||||||
Sbjct: 1714132 cctggatacaaacttggcagtgatgaagg 1714104
Score = 238 bits (120), Expect = 8e-59
Identities = 162/176 (92%)
Strand = Plus / Minus
Query: 1737 acaagactaactagtcaaggaaagccaatgactgaggtcaaggtgacgtctccaccttca 1796
|||||||||||||| || ||||| |||||||| |||||||| ||||| ||||||||| ||
Sbjct: 1710407 acaagactaactagccatggaaaaccaatgacggaggtcaaagtgacatctccacctcca 1710348
Query: 1797 atgaacactatggagcagctcttagctgttcaaaatgccatttccaaagttgaagagctt 1856
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1710347 atgaacacaatggagcagctcttagctgttcaaaatgctatttccaaagttgaagagctt 1710288
Query: 1857 gtccaggatgcaaatattgttcttctgaagataagagctctactgctggcttttcc 1912
|| ||||||||||||||||||||||||||||| |||||| || || ||||||||||
Sbjct: 1710287 gttcaggatgcaaatattgttcttctgaagattagagctttattgttggcttttcc 1710232
Score = 230 bits (116), Expect = 2e-56
Identities = 188/212 (88%)
Strand = Plus / Minus
Query: 294 ctgcaatatgactttgatatgcaagcatctgactctataaagcacccaagaaactatgcg 353
||||| |||||||||||||||||||||||||| || |||||||| |||||||| |||||
Sbjct: 1717797 ctgcagtatgactttgatatgcaagcatctgattccataaagcagccaagaaattatgca 1717738
Query: 354 agaaactttttggaatattgctgctttagggcacttgcacaggtctcaccagttgcggga 413
||||| |||||||||||||| || || |||||||||||||| | ||||| |||||| ||
Sbjct: 1717737 agaaattttttggaatattgttgtttgagggcacttgcacatgcctcacaagttgcaggg 1717678
Query: 414 tatcttgctgataaaagccttcgtcgcctgacatttgatatgatgttagcttgggaagtt 473
|||||| |||| |||||| |||||||||| | |||||||||||| ||||||||||||||
Sbjct: 1717677 tatctttctgacaaaagctttcgtcgcctaaattttgatatgatgctagcttgggaagtt 1717618
Query: 474 tcctcttcttcaagccagctcactgttaaggt 505
|||||||||||||| ||||||||||||||||
Sbjct: 1717617 ccctcttcttcaagcgagctcactgttaaggt 1717586
Score = 167 bits (84), Expect = 2e-37
Identities = 152/174 (87%), Gaps = 3/174 (1%)
Strand = Plus / Minus
Query: 1975 tgcccacaagattgcttatcctggcgatgtttctggaggtgttcacgaaccactctccga 2034
|||||||||| |||||| ||||| |||||||||||||| |||||||||||||| ||
Sbjct: 1708769 tgcccacaaggttgcttgtcctgatgatgtttctggaggcattcacgaaccactccccac 1708710
Query: 2035 taaggagagcaagcacagagagatgcaccagaaggttgagagagtggtggttcagcatac 2094
|||||||||||||||||| || || ||||||||||| |||||||||||||||||||| |
Sbjct: 1708709 caaggagagcaagcacagaaaggtggaccagaaggttaagagagtggtggttcagcattc 1708650
Query: 2095 ctgcagcgccagtagtggtggagaaggataacaaagaagataagaagacaaaat 2148
||||||| |||||||| |||||||||||| |||||||| ||||| |||||||
Sbjct: 1708649 ctgcagctccagtagtcgtggagaaggat---aaagaagacaagaaaacaaaat 1708599
Score = 167 bits (84), Expect = 2e-37
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 518 cacagttagtttggaggctttctcaagaatagcacctgccattccaacaatcgctgatgt 577
|||||| ||||| |||||||| ||||||||||||||||| |||||||||||| |||||||
Sbjct: 1717410 cacagtcagtttagaggctttttcaagaatagcacctgcaattccaacaatcactgatgt 1717351
Query: 578 agtaacttcttcaaatctctttgatgtgctttcatcaacaagtggaggccgtcttccatt 637
||||| | ||||||||| |||||||| |||||||| ||||||||||||| ||| ||||
Sbjct: 1717350 ggtaacatgttcaaatctatttgatgtactttcatcttcaagtggaggccggcttacatt 1717291
Query: 638 ccctgtatacgataagtatcttgcaggattggacag 673
|||||||| |||||||| ||| |||||||||||||
Sbjct: 1717290 tcctgtatatgataagtaccttacaggattggacag 1717255
Score = 155 bits (78), Expect = 9e-34
Identities = 153/178 (85%)
Strand = Plus / Minus
Query: 814 caggaagattgacacttacggatcatgccctttactttgaagctgtaaaggttgtgacat 873
||||||| || |||||||| |||||||| |||||||| ||||| | ||||||||| |
Sbjct: 1715512 caggaaggttaacacttactgatcatgctctttacttcgaagcacttcgggttgtgacct 1715453
Query: 874 ttgataagcccaaatcttatgaacttgcagaagatgcaaagcagattgttaaacctgagc 933
||||||||| ||| ||||||| ||||| |||||| ||||||| ||||||||||||||
Sbjct: 1715452 atgataagcctaaagcttatgagcttgccgaagatctaaagcagtctgttaaacctgagc 1715393
Query: 934 tgactggcccatggggttcacggctgtttgacaaagccgtcatgtataaatcaacaac 991
||||||| |||||||| |||||||| ||||||||||| || |||||||||||||||||
Sbjct: 1715392 tgactggtccatggggctcacggctatttgacaaagctgttatgtataaatcaacaac 1715335
Score = 131 bits (66), Expect = 1e-26
Identities = 126/146 (86%)
Strand = Plus / Minus
Query: 672 agagcatttaagaaaatgaagacacagtctgagtcatcgcttctatcgggcttccgatca 731
|||||| ||||||||||||| ||| |||||||| |||||| |||| | | || ||
Sbjct: 1715776 agagcaattaagaaaatgaaaggacaatctgagtcctcgcttttatctgcccagcggtct 1715717
Query: 732 cagagaggagaaagggttctagaagtcgatggaacattgacaactcaaccagtacttgag 791
||||||||||||||| || ||||||| |||||||||||||| |||||||||||||||||
Sbjct: 1715716 cagagaggagaaaggattgtagaagtagatggaacattgacgactcaaccagtacttgaa 1715657
Query: 792 catgttgggatttcaacatggccagg 817
|||||||||||||| |||||||||||
Sbjct: 1715656 catgttgggatttcgacatggccagg 1715631
Score = 85.7 bits (43), Expect = 7e-13
Identities = 85/99 (85%)
Strand = Plus / Minus
Query: 65 gaggatggcaatgatgaggagtacgcgggatctgctgatggagggtttcgaggggctcgt 124
||||||||| ||||||| | ||||||||||||||||||||||| |||||||| |||||
Sbjct: 1718783 gaggatggcgatgatgaaccggacgcgggatctgctgatggaggggttcgagggcctcgt 1718724
Query: 125 gcgggacgggtctttcaagtggcccgtcccccgccgcgg 163
|||||| || || |||| ||| || |||||||||||||
Sbjct: 1718723 gcgggagggctccttcagctgggccctcccccgccgcgg 1718685
Score = 67.9 bits (34), Expect = 2e-07
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 223 ccggcctctcccccatggtcagcgccgtcgtctctcgctgctcccg 268
||||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 1718610 ccggcctctcccccaaggccaacgccgtcgtctctcgctgctcccg 1718565
Score = 46.1 bits (23), Expect = 0.59
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 1561 aggaattgttatcaccggttagtgagctttggaggcttttggtatcgttggcattgtggg 1620
|||||||| |||| || || |||||||| |||||| ||||||| | | |||||| ||||
Sbjct: 1713096 aggaattgctatctcccgtaagtgagctatggaggtttttggtgttgctggcatcttggg 1713037
Query: 1621 atgagcc 1627
|||||||
Sbjct: 1713036 atgagcc 1713030
>gb|AC137615.2 | Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0053F13, from chromosome 5, complete sequence
Length = 149538
Score = 470 bits (237), Expect = e-128
Identities = 486/569 (85%)
Strand = Plus / Plus
Query: 995 aacagaaccagtgatcatagaatttccagagctggccgggcactctcgccgtgattactg 1054
|||||||||||||||| |||||||||||||| |||| || |||| ||| ||||| || ||
Sbjct: 141535 aacagaaccagtgatcttagaatttccagagttggctggccactttcgtcgtgactattg 141594
Query: 1055 gttggcaattatatctgaagttctttatgttcacaggtttgttagaaagttcgacataag 1114
| |||| |||||||| ||| |||||| ||| ||||| |||||||| ||||| ||||||||
Sbjct: 141595 gctggccattatatcagaaattctttgtgtccacagatttgttaggaagtttgacataag 141654
Query: 1115 tggagttgataaagaggaaataattctgaaggcttcgcttggtatcttgcggttgcaagc 1174
|||| |||| |||||||||| |||| |||| ||| || | || ||||| | |||||
Sbjct: 141655 tggaattgacaaagaggaaacaattttgaaagctgtactaagcattctgcggctacaagc 141714
Query: 1175 cattgaagaattagcctttccagcttccaatcgatacgaatctcttttgttgttcaatct 1234
|||||||| |||||| |||||| ||| ||||||| ||| ||||||||| |||| |||||
Sbjct: 141715 tattgaagagttagccattccagtttctaatcgattcgagtctcttttgatgtttaatct 141774
Query: 1235 ttgtgacaaacttcctggaggagatgtaatacttgaaacactagccagtactatatcatc 1294
|||||||||||||||||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 141775 atgtgacaaacttcctggaggtgatgtaatacttgaaacactagctggttctatatcatt 141834
Query: 1295 aagaagttcagctcaagccaaccaaccaggcacgagcattggaatgcgttccatgtctgc 1354
||||| |||||||||| |||||||| |||| |||| || || || ||| ||||| |
Sbjct: 141835 gagaagatcagctcaagttaaccaacctggcattagcagtgcaaggcattcaatgtcccc 141894
Query: 1355 cttcgctgtcctgtcaaacctgggcatggtatcaccaggtaataatagtgagagactctt 1414
|| |||| ||||| || || || ||||||||||| |||||| |||||||||||||
Sbjct: 141895 atttactgttctgtcgaatcttggagtggtatcaccaattaataagggtgagagactctt 141954
Query: 1415 tgttggtgagatagttgttggggaaatgagttccttgcagaaggcagttactgagtcaat 1474
|||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 141955 tgttggcgagatagttgttggggaaatgagtgccttgcagaaggtagttactgagtcaat 142014
Query: 1475 gaacaactacaagaaggttgaactggcccaagccacagttgatggagtcaaagttgatgg 1534
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 142015 gaacaactataagaaggttgaattggcccaagccacagttgatggagtcaaagttgatgg 142074
Query: 1535 gcttgatacaaacctggtagtgatgaagg 1563
|| ||||||||| ||| |||||||||||
Sbjct: 142075 cctagatacaaacttggcagtgatgaagg 142103
Score = 220 bits (111), Expect = 2e-53
Identities = 183/207 (88%)
Strand = Plus / Plus
Query: 299 atatgactttgatatgcaagcatctgactctataaagcacccaagaaactatgcgagaaa 358
||||||||||||||||||||||||||| || |||||||| | || ||| ||||| |||||
Sbjct: 138160 atatgactttgatatgcaagcatctgattccataaagcagcaaataaattatgcaagaaa 138219
Query: 359 ctttttggaatattgctgctttagggcacttgcacaggtctcaccagttgcgggatatct 418
|||||||||||||| || || |||||||||||||||| ||||| | |||| || |||||
Sbjct: 138220 ttttttggaatattgttgtttgagggcacttgcacaggcctcacaaattgcagggtatct 138279
Query: 419 tgctgataaaagccttcgtcgcctgacatttgatatgatgttagcttgggaagtttcctc 478
| |||| |||||| |||||||||||| |||||||||||| |||||||||| ||| ||||
Sbjct: 138280 ttctgacaaaagctttcgtcgcctgaattttgatatgatgctagcttgggaggttccctc 138339
Query: 479 ttcttcaagccagctcactgttaaggt 505
|||||||||||||||||||||||||||
Sbjct: 138340 ttcttcaagccagctcactgttaaggt 138366
Score = 214 bits (108), Expect = 1e-51
Identities = 156/172 (90%)
Strand = Plus / Plus
Query: 1737 acaagactaactagtcaaggaaagccaatgactgaggtcaaggtgacgtctccaccttca 1796
|||||||||||||| || | ||| ||||||| |||||||| ||||| ||||||||| ||
Sbjct: 144676 acaagactaactagccatgtaaatccaatgatggaggtcaaagtgacatctccacctcca 144735
Query: 1797 atgaacactatggagcagctcttagctgttcaaaatgccatttccaaagttgaagagctt 1856
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 144736 atgaacacgatggagcagctcttagctgttcaaaatgctatttccaaagttgaagagctt 144795
Query: 1857 gtccaggatgcaaatattgttcttctgaagataagagctctactgctggctt 1908
|| ||||||||||||||||||||||||||||| |||||| || || ||||||
Sbjct: 144796 gttcaggatgcaaatattgttcttctgaagattagagctttattgttggctt 144847
Score = 167 bits (84), Expect = 2e-37
Identities = 138/156 (88%)
Strand = Plus / Plus
Query: 518 cacagttagtttggaggctttctcaagaatagcacctgccattccaacaatcgctgatgt 577
|||||| ||||| |||||||| ||||||||||||||||| |||||||||||| |||||||
Sbjct: 138541 cacagtcagtttagaggctttttcaagaatagcacctgcaattccaacaatcactgatgt 138600
Query: 578 agtaacttcttcaaatctctttgatgtgctttcatcaacaagtggaggccgtcttccatt 637
||||| | ||||||||| |||||||| ||||||||| ||||||||||||| ||| ||||
Sbjct: 138601 ggtaacatgttcaaatctatttgatgtactttcatcatcaagtggaggccggcttacatt 138660
Query: 638 ccctgtatacgataagtatcttgcaggattggacag 673
|| ||||| |||||||| ||| |||||||||||||
Sbjct: 138661 tccagtatatgataagtaccttacaggattggacag 138696
Score = 163 bits (82), Expect = 4e-36
Identities = 195/232 (84%), Gaps = 3/232 (1%)
Strand = Plus / Plus
Query: 1917 caggccacagacaaagctatccttgcgctgttattgatggctcttgtccttgccttgctg 1976
|||||||| || ||| |||| |||||| || || |||||||||| |||||| | ||
Sbjct: 146591 caggccactgataaaactatacttgcgttggtagtgatggctctgagccttgcaatcgtg 146650
Query: 1977 cccacaagattgcttatcctggcgatgtttctggaggtgttcacgaaccactctccgata 2036
|||||||| |||||| ||||| ||||||||| ||||| |||||||||||||| ||
Sbjct: 146651 cccacaaggttgcttgtcctgatgatgtttctagaggtattcacgaaccactccccacct 146710
Query: 2037 aggagagcaagcacagagagatgcaccagaaggttgagagagtggtggttcagcatacct 2096
||||||||||||||||| || || ||||||||||| |||||||||||||||||||| |||
Sbjct: 146711 aggagagcaagcacagaaaggtggaccagaaggttaagagagtggtggttcagcattcct 146770
Query: 2097 gcagcgccagtagtggtggagaaggataacaaagaagataagaagacaaaat 2148
||||| |||||||| |||||||||||| |||||||| ||||| |||||||
Sbjct: 146771 gcagctccagtagtcgtggagaaggat---aaagaagacaagaaaacaaaat 146819
Score = 147 bits (74), Expect = 2e-31
Identities = 152/178 (85%)
Strand = Plus / Plus
Query: 814 caggaagattgacacttacggatcatgccctttactttgaagctgtaaaggttgtgacat 873
||||||| || |||||||| |||||||| |||||||| ||||| | ||||||||| |
Sbjct: 140681 caggaaggttaacacttactgatcatgctctttacttcgaagcacttcgggttgtgacct 140740
Query: 874 ttgataagcccaaatcttatgaacttgcagaagatgcaaagcagattgttaaacctgagc 933
||||||||| ||| ||||||| ||||| |||||| ||||||| ||||||||||||||
Sbjct: 140741 atgataagcctaaagcttatgagcttgctgaagatctaaagcagtctgttaaacctgagc 140800
Query: 934 tgactggcccatggggttcacggctgtttgacaaagccgtcatgtataaatcaacaac 991
||||||| |||||||| |||||||| ||||||||||| || |||||||||||| ||||
Sbjct: 140801 tgactggtccatggggctcacggctatttgacaaagctgttatgtataaatcagcaac 140858
Score = 113 bits (57), Expect = 3e-21
Identities = 138/165 (83%)
Strand = Plus / Minus
Query: 827 acttacggatcatgccctttactttgaagctgtaaaggttgtgacatttgataagcccaa 886
|||||| |||||||| |||||||| ||||| | ||||||||| | ||||||||| ||
Sbjct: 78288 acttactgatcatgctctttacttcgaagcacttcgggttgtgacctatgataagcctaa 78229
Query: 887 atcttatgaacttgcagaagatgcaaagcagattgttaaacctgagctgactggcccatg 946
| ||||||| ||||| ||| || |||| || |||||||||||||||||| | |||||
Sbjct: 78228 agcttatgagcttgctgaaaatctaaagtagtcggttaaacctgagctgacttgtccatg 78169
Query: 947 gggttcacggctgtttgacaaagccgtcatgtataaatcaacaac 991
||| |||||||| ||||||||||| || |||||||||||||||||
Sbjct: 78168 gggctcacggctatttgacaaagctgttatgtataaatcaacaac 78124
Score = 107 bits (54), Expect = 2e-19
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 732 cagagaggagaaagggttctagaagtcgatggaacattgacaactcaaccagtacttgag 791
||||||||||||||| || ||||| | |||||||||||||| |||||||||||||||||
Sbjct: 140476 cagagaggagaaaggattgtagaaatagatggaacattgacgactcaaccagtacttgaa 140535
Query: 792 catgttgggatttcaacatggccagg 817
|||||| ||||||| |||||||||||
Sbjct: 140536 catgttaggatttcgacatggccagg 140561
Score = 99.6 bits (50), Expect = 5e-17
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 732 cagagaggagaaagggttctagaagtcgatggaacattgacaactcaaccagtacttgag 791
||||||||||||||| || ||||| | |||| ||||||||| |||||||||||||||||
Sbjct: 78500 cagagaggagaaaggattgtagaaatagatgaaacattgacgactcaaccagtacttgaa 78441
Query: 792 catgttgggatttcaacatggccagg 817
|||||| ||||||| |||||||||||
Sbjct: 78440 catgttaggatttcgacatggccagg 78415
Score = 77.8 bits (39), Expect = 2e-10
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 65 gaggatggcaatgatgaggagtacgcgggatctgctgatggagggtttcgaggggctcgt 124
||||||||| ||||||| | ||||||||||||||||||||||| |||||||| |||||
Sbjct: 136957 gaggatggcgatgatgaaccggacgcgggatctgctgatggaggggttcgagggcctcgt 137016
Query: 125 gcgggacgggtctttcaagtggcccgtcccccgccgcgg 163
|||||| || || |||| ||| | |||||||||||||
Sbjct: 137017 gcgggagggctccttcacctggggcctcccccgccgcgg 137055
Score = 52.0 bits (26), Expect = 0.010
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 223 ccggcctctcccccatggtcagcgccgtcgtctctcgctgctcccg 268
||||||||||||||| || || ||||||||||||||| ||| ||||
Sbjct: 137124 ccggcctctcccccaaggccaacgccgtcgtctctcgatgcgcccg 137169
Score = 46.1 bits (23), Expect = 0.59
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 1561 aggaattgttatcaccggttagtgagctttggaggcttttggtatcgttggcattgtggg 1620
|||||||| |||| || || |||||||| |||||| ||||||| | | |||||| ||||
Sbjct: 143093 aggaattgctatctcccgtaagtgagctatggaggtttttggtgttgctggcatcttggg 143152
Query: 1621 atgagcc 1627
|||||||
Sbjct: 143153 atgagcc 143159
>gb|AC137607.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBa0006O14, complete sequence
Length = 142764
Score = 470 bits (237), Expect = e-128
Identities = 486/569 (85%)
Strand = Plus / Plus
Query: 995 aacagaaccagtgatcatagaatttccagagctggccgggcactctcgccgtgattactg 1054
|||||||||||||||| |||||||||||||| |||| || |||| ||| ||||| || ||
Sbjct: 25006 aacagaaccagtgatcttagaatttccagagttggctggccactttcgtcgtgactattg 25065
Query: 1055 gttggcaattatatctgaagttctttatgttcacaggtttgttagaaagttcgacataag 1114
| |||| |||||||| ||| |||||| ||| ||||| |||||||| ||||| ||||||||
Sbjct: 25066 gctggccattatatcagaaattctttgtgtccacagatttgttaggaagtttgacataag 25125
Query: 1115 tggagttgataaagaggaaataattctgaaggcttcgcttggtatcttgcggttgcaagc 1174
|||| |||| |||||||||| |||| |||| ||| || | || ||||| | |||||
Sbjct: 25126 tggaattgacaaagaggaaacaattttgaaagctgtactaagcattctgcggctacaagc 25185
Query: 1175 cattgaagaattagcctttccagcttccaatcgatacgaatctcttttgttgttcaatct 1234
|||||||| |||||| |||||| ||| ||||||| ||| ||||||||| |||| |||||
Sbjct: 25186 tattgaagagttagccattccagtttctaatcgattcgagtctcttttgatgtttaatct 25245
Query: 1235 ttgtgacaaacttcctggaggagatgtaatacttgaaacactagccagtactatatcatc 1294
|||||||||||||||||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 25246 atgtgacaaacttcctggaggtgatgtaatacttgaaacactagctggttctatatcatt 25305
Query: 1295 aagaagttcagctcaagccaaccaaccaggcacgagcattggaatgcgttccatgtctgc 1354
||||| |||||||||| |||||||| |||| |||| || || || ||| ||||| |
Sbjct: 25306 gagaagatcagctcaagttaaccaacctggcattagcagtgcaaggcattcaatgtcccc 25365
Query: 1355 cttcgctgtcctgtcaaacctgggcatggtatcaccaggtaataatagtgagagactctt 1414
|| |||| ||||| || || || ||||||||||| |||||| |||||||||||||
Sbjct: 25366 atttactgttctgtcgaatcttggagtggtatcaccaattaataagggtgagagactctt 25425
Query: 1415 tgttggtgagatagttgttggggaaatgagttccttgcagaaggcagttactgagtcaat 1474
|||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 25426 tgttggcgagatagttgttggggaaatgagtgccttgcagaaggtagttactgagtcaat 25485
Query: 1475 gaacaactacaagaaggttgaactggcccaagccacagttgatggagtcaaagttgatgg 1534
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 25486 gaacaactataagaaggttgaattggcccaagccacagttgatggagtcaaagttgatgg 25545
Query: 1535 gcttgatacaaacctggtagtgatgaagg 1563
|| ||||||||| ||| |||||||||||
Sbjct: 25546 cctagatacaaacttggcagtgatgaagg 25574
Score = 220 bits (111), Expect = 2e-53
Identities = 183/207 (88%)
Strand = Plus / Plus
Query: 299 atatgactttgatatgcaagcatctgactctataaagcacccaagaaactatgcgagaaa 358
||||||||||||||||||||||||||| || |||||||| | || ||| ||||| |||||
Sbjct: 21631 atatgactttgatatgcaagcatctgattccataaagcagcaaataaattatgcaagaaa 21690
Query: 359 ctttttggaatattgctgctttagggcacttgcacaggtctcaccagttgcgggatatct 418
|||||||||||||| || || |||||||||||||||| ||||| | |||| || |||||
Sbjct: 21691 ttttttggaatattgttgtttgagggcacttgcacaggcctcacaaattgcagggtatct 21750
Query: 419 tgctgataaaagccttcgtcgcctgacatttgatatgatgttagcttgggaagtttcctc 478
| |||| |||||| |||||||||||| |||||||||||| |||||||||| ||| ||||
Sbjct: 21751 ttctgacaaaagctttcgtcgcctgaattttgatatgatgctagcttgggaggttccctc 21810
Query: 479 ttcttcaagccagctcactgttaaggt 505
|||||||||||||||||||||||||||
Sbjct: 21811 ttcttcaagccagctcactgttaaggt 21837
Score = 214 bits (108), Expect = 1e-51
Identities = 156/172 (90%)
Strand = Plus / Plus
Query: 1737 acaagactaactagtcaaggaaagccaatgactgaggtcaaggtgacgtctccaccttca 1796
|||||||||||||| || | ||| ||||||| |||||||| ||||| ||||||||| ||
Sbjct: 28147 acaagactaactagccatgtaaatccaatgatggaggtcaaagtgacatctccacctcca 28206
Query: 1797 atgaacactatggagcagctcttagctgttcaaaatgccatttccaaagttgaagagctt 1856
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 28207 atgaacacgatggagcagctcttagctgttcaaaatgctatttccaaagttgaagagctt 28266
Query: 1857 gtccaggatgcaaatattgttcttctgaagataagagctctactgctggctt 1908
|| ||||||||||||||||||||||||||||| |||||| || || ||||||
Sbjct: 28267 gttcaggatgcaaatattgttcttctgaagattagagctttattgttggctt 28318
Score = 167 bits (84), Expect = 2e-37
Identities = 138/156 (88%)
Strand = Plus / Plus
Query: 518 cacagttagtttggaggctttctcaagaatagcacctgccattccaacaatcgctgatgt 577
|||||| ||||| |||||||| ||||||||||||||||| |||||||||||| |||||||
Sbjct: 22012 cacagtcagtttagaggctttttcaagaatagcacctgcaattccaacaatcactgatgt 22071
Query: 578 agtaacttcttcaaatctctttgatgtgctttcatcaacaagtggaggccgtcttccatt 637
||||| | ||||||||| |||||||| ||||||||| ||||||||||||| ||| ||||
Sbjct: 22072 ggtaacatgttcaaatctatttgatgtactttcatcatcaagtggaggccggcttacatt 22131
Query: 638 ccctgtatacgataagtatcttgcaggattggacag 673
|| ||||| |||||||| ||| |||||||||||||
Sbjct: 22132 tccagtatatgataagtaccttacaggattggacag 22167
Score = 163 bits (82), Expect = 4e-36
Identities = 195/232 (84%), Gaps = 3/232 (1%)
Strand = Plus / Plus
Query: 1917 caggccacagacaaagctatccttgcgctgttattgatggctcttgtccttgccttgctg 1976
|||||||| || ||| |||| |||||| || || |||||||||| |||||| | ||
Sbjct: 30062 caggccactgataaaactatacttgcgttggtagtgatggctctgagccttgcaatcgtg 30121
Query: 1977 cccacaagattgcttatcctggcgatgtttctggaggtgttcacgaaccactctccgata 2036
|||||||| |||||| ||||| ||||||||| ||||| |||||||||||||| ||
Sbjct: 30122 cccacaaggttgcttgtcctgatgatgtttctagaggtattcacgaaccactccccacct 30181
Query: 2037 aggagagcaagcacagagagatgcaccagaaggttgagagagtggtggttcagcatacct 2096
||||||||||||||||| || || ||||||||||| |||||||||||||||||||| |||
Sbjct: 30182 aggagagcaagcacagaaaggtggaccagaaggttaagagagtggtggttcagcattcct 30241
Query: 2097 gcagcgccagtagtggtggagaaggataacaaagaagataagaagacaaaat 2148
||||| |||||||| |||||||||||| |||||||| ||||| |||||||
Sbjct: 30242 gcagctccagtagtcgtggagaaggat---aaagaagacaagaaaacaaaat 30290
Score = 147 bits (74), Expect = 2e-31
Identities = 152/178 (85%)
Strand = Plus / Plus
Query: 814 caggaagattgacacttacggatcatgccctttactttgaagctgtaaaggttgtgacat 873
||||||| || |||||||| |||||||| |||||||| ||||| | ||||||||| |
Sbjct: 24152 caggaaggttaacacttactgatcatgctctttacttcgaagcacttcgggttgtgacct 24211
Query: 874 ttgataagcccaaatcttatgaacttgcagaagatgcaaagcagattgttaaacctgagc 933
||||||||| ||| ||||||| ||||| |||||| ||||||| ||||||||||||||
Sbjct: 24212 atgataagcctaaagcttatgagcttgctgaagatctaaagcagtctgttaaacctgagc 24271
Query: 934 tgactggcccatggggttcacggctgtttgacaaagccgtcatgtataaatcaacaac 991
||||||| |||||||| |||||||| ||||||||||| || |||||||||||| ||||
Sbjct: 24272 tgactggtccatggggctcacggctatttgacaaagctgttatgtataaatcagcaac 24329
Score = 107 bits (54), Expect = 2e-19
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 732 cagagaggagaaagggttctagaagtcgatggaacattgacaactcaaccagtacttgag 791
||||||||||||||| || ||||| | |||||||||||||| |||||||||||||||||
Sbjct: 23947 cagagaggagaaaggattgtagaaatagatggaacattgacgactcaaccagtacttgaa 24006
Query: 792 catgttgggatttcaacatggccagg 817
|||||| ||||||| |||||||||||
Sbjct: 24007 catgttaggatttcgacatggccagg 24032
Score = 77.8 bits (39), Expect = 2e-10
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 65 gaggatggcaatgatgaggagtacgcgggatctgctgatggagggtttcgaggggctcgt 124
||||||||| ||||||| | ||||||||||||||||||||||| |||||||| |||||
Sbjct: 20428 gaggatggcgatgatgaaccggacgcgggatctgctgatggaggggttcgagggcctcgt 20487
Query: 125 gcgggacgggtctttcaagtggcccgtcccccgccgcgg 163
|||||| || || |||| ||| | |||||||||||||
Sbjct: 20488 gcgggagggctccttcacctggggcctcccccgccgcgg 20526
Score = 52.0 bits (26), Expect = 0.010
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 223 ccggcctctcccccatggtcagcgccgtcgtctctcgctgctcccg 268
||||||||||||||| || || ||||||||||||||| ||| ||||
Sbjct: 20595 ccggcctctcccccaaggccaacgccgtcgtctctcgatgcgcccg 20640
Score = 46.1 bits (23), Expect = 0.59
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 1561 aggaattgttatcaccggttagtgagctttggaggcttttggtatcgttggcattgtggg 1620
|||||||| |||| || || |||||||| |||||| ||||||| | | |||||| ||||
Sbjct: 26564 aggaattgctatctcccgtaagtgagctatggaggtttttggtgttgctggcatcttggg 26623
Query: 1621 atgagcc 1627
|||||||
Sbjct: 26624 atgagcc 26630
>dbj|AP008211.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
Length = 29737217
Score = 470 bits (237), Expect = e-128
Identities = 486/569 (85%)
Strand = Plus / Plus
Query: 995 aacagaaccagtgatcatagaatttccagagctggccgggcactctcgccgtgattactg 1054
|||||||||||||||| |||||||||||||| |||| || |||| ||| ||||| || ||
Sbjct: 10241441 aacagaaccagtgatcttagaatttccagagttggctggccactttcgtcgtgactattg 10241500
Query: 1055 gttggcaattatatctgaagttctttatgttcacaggtttgttagaaagttcgacataag 1114
| |||| |||||||| ||| |||||| ||| ||||| |||||||| ||||| ||||||||
Sbjct: 10241501 gctggccattatatcagaaattctttgtgtccacagatttgttaggaagtttgacataag 10241560
Query: 1115 tggagttgataaagaggaaataattctgaaggcttcgcttggtatcttgcggttgcaagc 1174
|||| |||| |||||||||| |||| |||| ||| || | || ||||| | |||||
Sbjct: 10241561 tggaattgacaaagaggaaacaattttgaaagctgtactaagcattctgcggctacaagc 10241620
Query: 1175 cattgaagaattagcctttccagcttccaatcgatacgaatctcttttgttgttcaatct 1234
|||||||| |||||| |||||| ||| ||||||| ||| ||||||||| |||| |||||
Sbjct: 10241621 tattgaagagttagccattccagtttctaatcgattcgagtctcttttgatgtttaatct 10241680
Query: 1235 ttgtgacaaacttcctggaggagatgtaatacttgaaacactagccagtactatatcatc 1294
|||||||||||||||||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 10241681 atgtgacaaacttcctggaggtgatgtaatacttgaaacactagctggttctatatcatt 10241740
Query: 1295 aagaagttcagctcaagccaaccaaccaggcacgagcattggaatgcgttccatgtctgc 1354
||||| |||||||||| |||||||| |||| |||| || || || ||| ||||| |
Sbjct: 10241741 gagaagatcagctcaagttaaccaacctggcattagcagtgcaaggcattcaatgtcccc 10241800
Query: 1355 cttcgctgtcctgtcaaacctgggcatggtatcaccaggtaataatagtgagagactctt 1414
|| |||| ||||| || || || ||||||||||| |||||| |||||||||||||
Sbjct: 10241801 atttactgttctgtcgaatcttggagtggtatcaccaattaataagggtgagagactctt 10241860
Query: 1415 tgttggtgagatagttgttggggaaatgagttccttgcagaaggcagttactgagtcaat 1474
|||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 10241861 tgttggcgagatagttgttggggaaatgagtgccttgcagaaggtagttactgagtcaat 10241920
Query: 1475 gaacaactacaagaaggttgaactggcccaagccacagttgatggagtcaaagttgatgg 1534
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10241921 gaacaactataagaaggttgaattggcccaagccacagttgatggagtcaaagttgatgg 10241980
Query: 1535 gcttgatacaaacctggtagtgatgaagg 1563
|| ||||||||| ||| |||||||||||
Sbjct: 10241981 cctagatacaaacttggcagtgatgaagg 10242009
Score = 220 bits (111), Expect = 2e-53
Identities = 183/207 (88%)
Strand = Plus / Plus
Query: 299 atatgactttgatatgcaagcatctgactctataaagcacccaagaaactatgcgagaaa 358
||||||||||||||||||||||||||| || |||||||| | || ||| ||||| |||||
Sbjct: 10238066 atatgactttgatatgcaagcatctgattccataaagcagcaaataaattatgcaagaaa 10238125
Query: 359 ctttttggaatattgctgctttagggcacttgcacaggtctcaccagttgcgggatatct 418
|||||||||||||| || || |||||||||||||||| ||||| | |||| || |||||
Sbjct: 10238126 ttttttggaatattgttgtttgagggcacttgcacaggcctcacaaattgcagggtatct 10238185
Query: 419 tgctgataaaagccttcgtcgcctgacatttgatatgatgttagcttgggaagtttcctc 478
| |||| |||||| |||||||||||| |||||||||||| |||||||||| ||| ||||
Sbjct: 10238186 ttctgacaaaagctttcgtcgcctgaattttgatatgatgctagcttgggaggttccctc 10238245
Query: 479 ttcttcaagccagctcactgttaaggt 505
|||||||||||||||||||||||||||
Sbjct: 10238246 ttcttcaagccagctcactgttaaggt 10238272
Score = 214 bits (108), Expect = 1e-51
Identities = 156/172 (90%)
Strand = Plus / Plus
Query: 1737 acaagactaactagtcaaggaaagccaatgactgaggtcaaggtgacgtctccaccttca 1796
|||||||||||||| || | ||| ||||||| |||||||| ||||| ||||||||| ||
Sbjct: 10244582 acaagactaactagccatgtaaatccaatgatggaggtcaaagtgacatctccacctcca 10244641
Query: 1797 atgaacactatggagcagctcttagctgttcaaaatgccatttccaaagttgaagagctt 1856
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 10244642 atgaacacgatggagcagctcttagctgttcaaaatgctatttccaaagttgaagagctt 10244701
Query: 1857 gtccaggatgcaaatattgttcttctgaagataagagctctactgctggctt 1908
|| ||||||||||||||||||||||||||||| |||||| || || ||||||
Sbjct: 10244702 gttcaggatgcaaatattgttcttctgaagattagagctttattgttggctt 10244753
Score = 167 bits (84), Expect = 2e-37
Identities = 138/156 (88%)
Strand = Plus / Plus
Query: 518 cacagttagtttggaggctttctcaagaatagcacctgccattccaacaatcgctgatgt 577
|||||| ||||| |||||||| ||||||||||||||||| |||||||||||| |||||||
Sbjct: 10238447 cacagtcagtttagaggctttttcaagaatagcacctgcaattccaacaatcactgatgt 10238506
Query: 578 agtaacttcttcaaatctctttgatgtgctttcatcaacaagtggaggccgtcttccatt 637
||||| | ||||||||| |||||||| ||||||||| ||||||||||||| ||| ||||
Sbjct: 10238507 ggtaacatgttcaaatctatttgatgtactttcatcatcaagtggaggccggcttacatt 10238566
Query: 638 ccctgtatacgataagtatcttgcaggattggacag 673
|| ||||| |||||||| ||| |||||||||||||
Sbjct: 10238567 tccagtatatgataagtaccttacaggattggacag 10238602
Score = 163 bits (82), Expect = 4e-36
Identities = 195/232 (84%), Gaps = 3/232 (1%)
Strand = Plus / Plus
Query: 1917 caggccacagacaaagctatccttgcgctgttattgatggctcttgtccttgccttgctg 1976
|||||||| || ||| |||| |||||| || || |||||||||| |||||| | ||
Sbjct: 10246497 caggccactgataaaactatacttgcgttggtagtgatggctctgagccttgcaatcgtg 10246556
Query: 1977 cccacaagattgcttatcctggcgatgtttctggaggtgttcacgaaccactctccgata 2036
|||||||| |||||| ||||| ||||||||| ||||| |||||||||||||| ||
Sbjct: 10246557 cccacaaggttgcttgtcctgatgatgtttctagaggtattcacgaaccactccccacct 10246616
Query: 2037 aggagagcaagcacagagagatgcaccagaaggttgagagagtggtggttcagcatacct 2096
||||||||||||||||| || || ||||||||||| |||||||||||||||||||| |||
Sbjct: 10246617 aggagagcaagcacagaaaggtggaccagaaggttaagagagtggtggttcagcattcct 10246676
Query: 2097 gcagcgccagtagtggtggagaaggataacaaagaagataagaagacaaaat 2148
||||| |||||||| |||||||||||| |||||||| ||||| |||||||
Sbjct: 10246677 gcagctccagtagtcgtggagaaggat---aaagaagacaagaaaacaaaat 10246725
Score = 147 bits (74), Expect = 2e-31
Identities = 152/178 (85%)
Strand = Plus / Plus
Query: 814 caggaagattgacacttacggatcatgccctttactttgaagctgtaaaggttgtgacat 873
||||||| || |||||||| |||||||| |||||||| ||||| | ||||||||| |
Sbjct: 10240587 caggaaggttaacacttactgatcatgctctttacttcgaagcacttcgggttgtgacct 10240646
Query: 874 ttgataagcccaaatcttatgaacttgcagaagatgcaaagcagattgttaaacctgagc 933
||||||||| ||| ||||||| ||||| |||||| ||||||| ||||||||||||||
Sbjct: 10240647 atgataagcctaaagcttatgagcttgctgaagatctaaagcagtctgttaaacctgagc 10240706
Query: 934 tgactggcccatggggttcacggctgtttgacaaagccgtcatgtataaatcaacaac 991
||||||| |||||||| |||||||| ||||||||||| || |||||||||||| ||||
Sbjct: 10240707 tgactggtccatggggctcacggctatttgacaaagctgttatgtataaatcagcaac 10240764
Score = 113 bits (57), Expect = 3e-21
Identities = 138/165 (83%)
Strand = Plus / Minus
Query: 827 acttacggatcatgccctttactttgaagctgtaaaggttgtgacatttgataagcccaa 886
|||||| |||||||| |||||||| ||||| | ||||||||| | ||||||||| ||
Sbjct: 10178194 acttactgatcatgctctttacttcgaagcacttcgggttgtgacctatgataagcctaa 10178135
Query: 887 atcttatgaacttgcagaagatgcaaagcagattgttaaacctgagctgactggcccatg 946
| ||||||| ||||| ||| || |||| || |||||||||||||||||| | |||||
Sbjct: 10178134 agcttatgagcttgctgaaaatctaaagtagtcggttaaacctgagctgacttgtccatg 10178075
Query: 947 gggttcacggctgtttgacaaagccgtcatgtataaatcaacaac 991
||| |||||||| ||||||||||| || |||||||||||||||||
Sbjct: 10178074 gggctcacggctatttgacaaagctgttatgtataaatcaacaac 10178030
Score = 107 bits (54), Expect = 2e-19
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 732 cagagaggagaaagggttctagaagtcgatggaacattgacaactcaaccagtacttgag 791
||||||||||||||| || ||||| | |||||||||||||| |||||||||||||||||
Sbjct: 10240382 cagagaggagaaaggattgtagaaatagatggaacattgacgactcaaccagtacttgaa 10240441
Query: 792 catgttgggatttcaacatggccagg 817
|||||| ||||||| |||||||||||
Sbjct: 10240442 catgttaggatttcgacatggccagg 10240467
Score = 99.6 bits (50), Expect = 5e-17
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 732 cagagaggagaaagggttctagaagtcgatggaacattgacaactcaaccagtacttgag 791
||||||||||||||| || ||||| | |||| ||||||||| |||||||||||||||||
Sbjct: 10178406 cagagaggagaaaggattgtagaaatagatgaaacattgacgactcaaccagtacttgaa 10178347
Query: 792 catgttgggatttcaacatggccagg 817
|||||| ||||||| |||||||||||
Sbjct: 10178346 catgttaggatttcgacatggccagg 10178321
Score = 77.8 bits (39), Expect = 2e-10
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 65 gaggatggcaatgatgaggagtacgcgggatctgctgatggagggtttcgaggggctcgt 124
||||||||| ||||||| | ||||||||||||||||||||||| |||||||| |||||
Sbjct: 10236863 gaggatggcgatgatgaaccggacgcgggatctgctgatggaggggttcgagggcctcgt 10236922
Query: 125 gcgggacgggtctttcaagtggcccgtcccccgccgcgg 163
|||||| || || |||| ||| | |||||||||||||
Sbjct: 10236923 gcgggagggctccttcacctggggcctcccccgccgcgg 10236961
Score = 52.0 bits (26), Expect = 0.010
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 223 ccggcctctcccccatggtcagcgccgtcgtctctcgctgctcccg 268
||||||||||||||| || || ||||||||||||||| ||| ||||
Sbjct: 10237030 ccggcctctcccccaaggccaacgccgtcgtctctcgatgcgcccg 10237075
Score = 46.1 bits (23), Expect = 0.59
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 1561 aggaattgttatcaccggttagtgagctttggaggcttttggtatcgttggcattgtggg 1620
|||||||| |||| || || |||||||| |||||| ||||||| | | |||||| ||||
Sbjct: 10242999 aggaattgctatctcccgtaagtgagctatggaggtttttggtgttgctggcatcttggg 10243058
Query: 1621 atgagcc 1627
|||||||
Sbjct: 10243059 atgagcc 10243065
>emb|AJ412874.1 |ISP412874 Isorineloricaria spinosissima 18S rRNA gene (partial), 5.8S rRNA
gene, 28S rRNA gene (partial), internal transcribed
spacer 1 (ITS1) and internal transcribed spacer 2
(ITS2), clone 21
Length = 1080
Score = 42.1 bits (21), Expect = 9.2
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 147 cccgtcccccgccgcggcgtggacg 171
||||||||||||| |||||||||||
Sbjct: 705 cccgtcccccgcctcggcgtggacg 729
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 445,954,026
Number of extensions: 24353788
Number of successful extensions: 152388
Number of sequences better than 10.0: 42
Number of HSP's gapped: 152369
Number of HSP's successfully gapped: 128
Length of query: 2412
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2389
Effective length of database: 18,503,978,556
Effective search space: 44206004770284
Effective search space used: 44206004770284
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)