ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf89o05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 60 2e-05
2emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126... 60 2e-05
3dbj|AK241076.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 54 0.001
4ref|NM_001072136.1| Oryza sativa (japonica cultivar-group) Os11g... 54 0.001
5gb|AC136969.2| Oryza sativa (japonica cultivar-group) chromosome... 54 0.001
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 54 0.001
7ref|NM_001072546.1| Oryza sativa (japonica cultivar-group) Os12g... 52 0.006
8dbj|AK072581.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.006
9gb|AC136964.2| Sus scrofa domestica clone RP44-154L9, complete s... 46 0.35
10emb|BX470162.9| Zebrafish DNA sequence from clone CH211-216L23 i... 46 0.35
11gb|AC122688.5| Homo sapiens 12 BAC RP11-158L12 (Roswell Park Can... 44 1.4
12gb|AC169087.3| Gallus gallus BAC clone CH261-119D18 from chromos... 44 1.4
13gb|AC163704.4| Gallus gallus BAC clone CH261-114A20 from chromos... 44 1.4
14gb|AC133599.3| Mus musculus BAC clone RP24-390N10 from 6, comple... 44 1.4
15emb|CT835072.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 5.4
16emb|AM180355.1| Clostridium difficile 630 complete genome 42 5.4
17gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 5.4
18gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence 42 5.4
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 5.4
20emb|BX927334.17| Zebrafish DNA sequence from clone CH211-112H5 i... 42 5.4
21emb|BX321874.2| Human DNA sequence from clone RP11-496M10 on chr... 42 5.4
22emb|AL353143.14| Human DNA sequence from clone RP11-383F12 on ch... 42 5.4
23gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 5.4
24emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome... 42 5.4
25emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 5.4
26emb|AL606658.5|OSJN00098 Oryza sativa genomic DNA, chromosome 4,... 42 5.4
27emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4,... 42 5.4
28gb|AC134437.3| Mus musculus BAC clone RP24-450H12 from chromosom... 42 5.4
29gb|AC174468.2| Medicago truncatula chromosome 2 BAC clone mth2-8... 42 5.4
30gb|M29301.1|RATSMP2A Rat senescence marker protein 2A gene, exon... 42 5.4 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993
 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                        
Query: 805    gatctgcaagatgtttcttgatctgatcatctcaaaccaagc 846
              |||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 931618 gatctgcaagatgtttattgatctgattatctcaaatcaagc 931659



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 804    ggatctgcaagatgtttcttgatctgatcatctcaaaccaagc 846
              ||||||||||||||||| ||||||||||  ||||||| |||||
Sbjct: 919996 ggatctgcaagatgtttattgatctgattgtctcaaatcaagc 920038



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 622    catctttgacccctttgctccaggaccagaggag 655
              ||||||||| || |||||||||||||||||||||
Sbjct: 931438 catctttgatccttttgctccaggaccagaggag 931471



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 622    catctttgacccctttgctccaggaccagaggag 655
              ||||||||| || |||||||||||||||||||||
Sbjct: 942210 catctttgatccttttgctccaggaccagaggag 942243



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 622    catctttgacccctttgctccaggaccagaggag 655
              ||||||||| || ||||||||||||||| |||||
Sbjct: 919817 catctttgatccttttgctccaggaccaaaggag 919850



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                               
Query: 993    agctcagcccaggcatctgccggaagctcgactttgggtctgtcagtcc 1041
              ||||||||||| |||| || || |||||||||||||  || ||||||||
Sbjct: 920176 agctcagcccaagcatttgtcgaaagctcgactttgattcagtcagtcc 920224



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                               
Query: 993    agctcagcccaggcatctgccggaagctcgactttgggtctgtcagtcc 1041
              ||||||||||| |||| || || |||||||||||||  || ||||||||
Sbjct: 942569 agctcagcccaagcatttgtcgaaagctcgactttgattcagtcagtcc 942617
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>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134217

 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 805   gatctgcaagatgtttcttgatctgatcatctcaaaccaagc 846
             |||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 69203 gatctgcaagatgtttattgatctgattatctcaaatcaagc 69244



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 804   ggatctgcaagatgtttcttgatctgatcatctcaaaccaagc 846
             ||||||||||||||||| ||||||||||  ||||||| |||||
Sbjct: 57581 ggatctgcaagatgtttattgatctgattgtctcaaatcaagc 57623



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 622   catctttgacccctttgctccaggaccagaggag 655
             ||||||||| || |||||||||||||||||||||
Sbjct: 69023 catctttgatccttttgctccaggaccagaggag 69056



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 622   catctttgacccctttgctccaggaccagaggag 655
             ||||||||| || |||||||||||||||||||||
Sbjct: 79795 catctttgatccttttgctccaggaccagaggag 79828



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 622   catctttgacccctttgctccaggaccagaggag 655
             ||||||||| || ||||||||||||||| |||||
Sbjct: 57402 catctttgatccttttgctccaggaccaaaggag 57435



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 993   agctcagcccaggcatctgccggaagctcgactttgggtctgtcagtcc 1041
             ||||||||||| |||| || || |||||||||||||  || ||||||||
Sbjct: 57761 agctcagcccaagcatttgtcgaaagctcgactttgattcagtcagtcc 57809



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 993   agctcagcccaggcatctgccggaagctcgactttgggtctgtcagtcc 1041
             ||||||||||| |||| || || |||||||||||||  || ||||||||
Sbjct: 80154 agctcagcccaagcatttgtcgaaagctcgactttgattcagtcagtcc 80202
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>dbj|AK241076.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065070G03,
           full insert sequence
          Length = 1297

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 804 ggatctgcaagatgtttcttgatctgatcatctcaaaccaagc 846
           ||||||||||||||||| ||||||||||  ||||||| |||||
Sbjct: 698 ggatctgcaagatgtttattgatctgattgtctcaaatcaagc 740



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 622 catctttgacccctttgctccaggaccagaggag 655
           ||||||||| || |||||||| ||||||||||||
Sbjct: 519 catctttgatccttttgctccgggaccagaggag 552
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>ref|NM_001072136.1| Oryza sativa (japonica cultivar-group) Os11g0119900 (Os11g0119900)
           mRNA, complete cds
          Length = 1170

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 804 ggatctgcaagatgtttcttgatctgatcatctcaaaccaagc 846
           ||||||||||||||||| ||||||||||  ||||||| |||||
Sbjct: 911 ggatctgcaagatgtttattgatctgattgtctcaaatcaagc 953



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 622 catctttgacccctttgctccaggaccagaggag 655
           ||||||||| || |||||||| ||||||||||||
Sbjct: 732 catctttgatccttttgctccgggaccagaggag 765



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 993  agctcagcccaggcatctgccggaagctcgactttgggtctgtcagtcc 1041
            ||||||||||| |||| || || |||||||||||||  || ||||||||
Sbjct: 1091 agctcagcccaagcatttgtcgaaagctcgactttgattcagtcagtcc 1139
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>gb|AC136969.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0048P17, complete sequence
          Length = 149883

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 804   ggatctgcaagatgtttcttgatctgatcatctcaaaccaagc 846
             ||||||||||||||||| ||||||||||  ||||||| |||||
Sbjct: 51877 ggatctgcaagatgtttattgatctgattgtctcaaatcaagc 51919



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 622   catctttgacccctttgctccaggaccagaggag 655
             ||||||||| || |||||||| ||||||||||||
Sbjct: 51698 catctttgatccttttgctccgggaccagaggag 51731



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 993   agctcagcccaggcatctgccggaagctcgactttgggtctgtcagtcc 1041
             ||||||||||| |||| || || |||||||||||||  || ||||||||
Sbjct: 52057 agctcagcccaagcatttgtcgaaagctcgactttgattcagtcagtcc 52105
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 804    ggatctgcaagatgtttcttgatctgatcatctcaaaccaagc 846
              ||||||||||||||||| ||||||||||  ||||||| |||||
Sbjct: 885001 ggatctgcaagatgtttattgatctgattgtctcaaatcaagc 885043



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 622    catctttgacccctttgctccaggaccagaggag 655
              ||||||||| || |||||||| ||||||||||||
Sbjct: 884822 catctttgatccttttgctccgggaccagaggag 884855



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                               
Query: 993    agctcagcccaggcatctgccggaagctcgactttgggtctgtcagtcc 1041
              ||||||||||| |||| || || |||||||||||||  || ||||||||
Sbjct: 885181 agctcagcccaagcatttgtcgaaagctcgactttgattcagtcagtcc 885229
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>ref|NM_001072546.1| Oryza sativa (japonica cultivar-group) Os12g0119700 (Os12g0119700)
            mRNA, complete cds
          Length = 2360

 Score = 52.0 bits (26), Expect = 0.006
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                              
Query: 622  catctttgacccctttgctccaggaccagaggag 655
            ||||||||| || |||||||||||||||||||||
Sbjct: 1581 catctttgatccttttgctccaggaccagaggag 1614



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 993  agctcagcccaggcatctgccggaagctcgactttgggtctgtcagtcc 1041
            ||||||||||| |||| || || |||||||||||||  || ||||||||
Sbjct: 1940 agctcagcccaagcatttgtcgaaagctcgactttgattcagtcagtcc 1988
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>dbj|AK072581.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130K21, full
            insert sequence
          Length = 2361

 Score = 52.0 bits (26), Expect = 0.006
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                              
Query: 622  catctttgacccctttgctccaggaccagaggag 655
            ||||||||| || |||||||||||||||||||||
Sbjct: 1582 catctttgatccttttgctccaggaccagaggag 1615



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 993  agctcagcccaggcatctgccggaagctcgactttgggtctgtcagtcc 1041
            ||||||||||| |||| || || |||||||||||||  || ||||||||
Sbjct: 1941 agctcagcccaagcatttgtcgaaagctcgactttgattcagtcagtcc 1989
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>gb|AC136964.2| Sus scrofa domestica clone RP44-154L9, complete sequence
          Length = 164640

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 19    cctctccatctcctctctgccttcctc 45
             ||||||| |||||||||||||||||||
Sbjct: 36743 cctctccctctcctctctgccttcctc 36717
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>emb|BX470162.9| Zebrafish DNA sequence from clone CH211-216L23 in linkage group 18,
              complete sequence
          Length = 215723

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 28     ctcctctctgccttcctcgatcc 50
              |||||||||||||||||||||||
Sbjct: 157572 ctcctctctgccttcctcgatcc 157550
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>gb|AC122688.5| Homo sapiens 12 BAC RP11-158L12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178315

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 20    ctctccatctcctctctgccttcctc 45
             ||||||||||| ||||||||||||||
Sbjct: 34251 ctctccatctcatctctgccttcctc 34226
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>gb|AC169087.3| Gallus gallus BAC clone CH261-119D18 from chromosome ul, complete
              sequence
          Length = 225652

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1069   gagctgagcctgttccttgggg 1090
              ||||||||||||||||||||||
Sbjct: 170260 gagctgagcctgttccttgggg 170281
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>gb|AC163704.4| Gallus gallus BAC clone CH261-114A20 from chromosome ul, complete
              sequence
          Length = 198816

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1069   gagctgagcctgttccttgggg 1090
              ||||||||||||||||||||||
Sbjct: 168140 gagctgagcctgttccttgggg 168119
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>gb|AC133599.3| Mus musculus BAC clone RP24-390N10 from 6, complete sequence
          Length = 185830

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 260   tttgagtataacatttattttc 281
             ||||||||||||||||||||||
Sbjct: 83896 tttgagtataacatttattttc 83875
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>emb|CT835072.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN039M09, full
           insert sequence
          Length = 837

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 1   agaggtgcccccactgctcctctccatct 29
           ||||||||| |||||||||||| ||||||
Sbjct: 96  agaggtgcctccactgctcctcaccatct 124
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>emb|AM180355.1| Clostridium difficile 630 complete genome
          Length = 4290252

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 215     agaaacaggttttgatactga 235
               |||||||||||||||||||||
Sbjct: 3679385 agaaacaggttttgatactga 3679405
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 165     ggggatctcggggctgtcaatcggcgagc 193
               |||| ||||||||||||| ||||||||||
Sbjct: 2420896 ggggctctcggggctgtccatcggcgagc 2420868
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>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence
          Length = 279448

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1299  ggcacatgtgccttgtgggtg 1319
             |||||||||||||||||||||
Sbjct: 14495 ggcacatgtgccttgtgggtg 14515
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 1        agaggtgcccccactgctcctctccatct 29
                ||||||||| |||||||||||| ||||||
Sbjct: 29639426 agaggtgcctccactgctcctcaccatct 29639454
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>emb|BX927334.17| Zebrafish DNA sequence from clone CH211-112H5 in linkage group 21,
              complete sequence
          Length = 183608

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 280    tcggaataaatcacttttcca 300
              |||||||||||||||||||||
Sbjct: 143045 tcggaataaatcacttttcca 143025
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>emb|BX321874.2| Human DNA sequence from clone RP11-496M10 on chromosome X, complete
             sequence
          Length = 52877

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 457   aaataaggaagatgtagaatc 477
             |||||||||||||||||||||
Sbjct: 49395 aaataaggaagatgtagaatc 49375
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>emb|AL353143.14| Human DNA sequence from clone RP11-383F12 on chromosome 13 Contains
             part of a novel gene (including KIAA0865), possible
             ortholog of rat myosin heavy chain Myr 8 (Loc192253) and a
             novel gene, complete sequence
          Length = 170276

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1350  aaatagtttgttgtctctctt 1370
             |||||||||||||||||||||
Sbjct: 71959 aaatagtttgttgtctctctt 71939
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 84      accggagcagcgccgccagct 104
               |||||||||||||||||||||
Sbjct: 1174375 accggagcagcgccgccagct 1174395
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>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13
          Length = 346186

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 165    ggggatctcggggctgtcaatcggcgagc 193
              |||| ||||||||||||| ||||||||||
Sbjct: 343501 ggggctctcggggctgtccatcggcgagc 343473
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>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14
          Length = 306050

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 165    ggggatctcggggctgtcaatcggcgagc 193
              |||| ||||||||||||| ||||||||||
Sbjct: 197722 ggggctctcggggctgtccatcggcgagc 197694
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>emb|AL606658.5|OSJN00098 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016D16,
             complete sequence
          Length = 133113

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 1     agaggtgcccccactgctcctctccatct 29
             ||||||||| |||||||||||| ||||||
Sbjct: 26646 agaggtgcctccactgctcctcaccatct 26674
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>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16,
              complete sequence
          Length = 145739

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 1      agaggtgcccccactgctcctctccatct 29
              ||||||||| |||||||||||| ||||||
Sbjct: 142115 agaggtgcctccactgctcctcaccatct 142143
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>gb|AC134437.3| Mus musculus BAC clone RP24-450H12 from chromosome 19, complete
             sequence
          Length = 171749

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    tccatctcctctctgccttcc 43
             |||||||||||||||||||||
Sbjct: 81978 tccatctcctctctgccttcc 81958
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>gb|AC174468.2| Medicago truncatula chromosome 2 BAC clone mth2-89f22, complete
             sequence
          Length = 89512

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 400   tgtagaagtgctggaaaagag 420
             |||||||||||||||||||||
Sbjct: 80655 tgtagaagtgctggaaaagag 80675
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>gb|M29301.1|RATSMP2A Rat senescence marker protein 2A gene, exons 1 and 2
          Length = 4889

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1261 cccagtctttctgccctgatt 1281
            |||||||||||||||||||||
Sbjct: 714  cccagtctttctgccctgatt 694


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 267,499,597
Number of extensions: 14231831
Number of successful extensions: 295078
Number of sequences better than 10.0: 30
Number of HSP's gapped: 295078
Number of HSP's successfully gapped: 51
Length of query: 1422
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1399
Effective length of database: 18,503,978,556
Effective search space: 25887065999844
Effective search space used: 25887065999844
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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