ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf93c05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001071363.1| Oryza sativa (japonica cultivar-group) Os10g0471400 (Os10g0471400) mRNA, complete cds Length = 4029 Score = 1108 bits (559), Expect = 0.0 Identities = 1114/1299 (85%) Strand = Plus / Plus Query: 286 gaggggaagattaaggaactttgtccggcggatggcaatggagtgcctttgctctggaga 345 |||||| ||||| ||| ||| |||||||||||||||||||||||||| ||||| || || Sbjct: 342 gagggggagattgaggggcttcgtccggcggatggcaatggagtgcctgtgctccgggga 401 Query: 346 gcagctgaaaggggcagatgacaccatccggtcatcggactctacttttacgaaagattt 405 |||||||| | ||||||||| | |||||||||| |||| ||| | | || ||||||| Sbjct: 402 gcagctgagggcggcagatgagatcatccggtcaccggaatctgcaatcaccaaagattg 461 Query: 406 ctcagccagtgggtattcttccaggaatggagaagtcgagcaataccttgataatggcaa 465 ||| ||||| ||||| || ||| ||| ||||| ||||||| ||||||||||||||||| Sbjct: 462 ctcggccagcgggtactcgtcccagaacggagagatcgagcagtaccttgataatggcaa 521 Query: 466 cattgaagaagctgagttatcactccgggagggcgtctgccttaattatgaggaagcaag 525 |||||| || || ||||| || ||||||||||| || |||||||| |||||||||||||| Sbjct: 522 cattgaggaggccgagttgtcgctccgggagggtgtttgccttaactatgaggaagcaag 581 Query: 526 ggcattgctaggaaggctagagtaccaacgaggacatgtagaagcagcacttcgtgtgtt 585 |||||| |||||||||||||||||||| || || ||||||||||||||||||||||| || Sbjct: 582 ggcattactaggaaggctagagtaccagcgtgggcatgtagaagcagcacttcgtgtatt 641 Query: 586 tgacgggatagacatatcttcattagttcctaagatgaaaatctcaatcgctagaaaagc 645 ||| ||||| || ||| || | ||||| |||||||||||||||||||| |||||||||| Sbjct: 642 tgatgggattgatatacctgctttagtccctaagatgaaaatctcaattgctagaaaagt 701 Query: 646 acatcgccgaaagactcgttcacaatgggatgctccaccaatgcccttgcatgctgtgag 705 |||| || ||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 702 ggatcgtcggaagactcgttcacaatgggattctccaccaatgcccttgcatgctgtcag 761 Query: 706 cctacttatggaggcaatatatctcaaagcaagagcacttcatgatctcggaaagttcaa 765 |||||| |||||||| ||||| || ||| ||||||| ||||||||||| ||||||||||| Sbjct: 762 cctactcatggaggccatataccttaaatcaagagctcttcatgatcttggaaagttcaa 821 Query: 766 agatgctgcacaagagtgcagaatgatattggatattgtggaagcagcagtacctgaagg 825 ||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 822 agaagctgcacaagaatgcagaatgatattggatatcgtggaagcagcagtgcctgaggg 881 Query: 826 cttaccagcaggcttcggaaaaggttgtaaattgaacgaaataatatgcaaggccgtaga 885 |||||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 882 tttaccagcaggctttggaaaagattgtaaattaaacgaaataatatgcaaggctgtaga 941 Query: 886 gtttctccctgagttatggaaattagcggggttttctcttgaagccatttctgaatacag 945 ||| |||||||| |||||||| ||| ||| ||||| ||||||||||| ||| ||| || Sbjct: 942 gttgctccctgaactatggaaactagggggattttcacttgaagccatatcttcatatag 1001 Query: 946 gaggtctcttctcaataactggaatcttgatggagagaccatagctaaaatacaaaagga 1005 |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| || Sbjct: 1002 gaggtctcttctcaataattggaaccttgatggagagaccatagctcgcatacaaaaaga 1061 Query: 1006 atttgctgtttttcttctgtacagtggctgcgaagcccgctctccaaatctccattctca 1065 |||||| ||||||| || || |||||||| ||||| || |||||||||| ||||| || Sbjct: 1062 atttgccatttttctcctatatagtggctgtgaagcacgacctccaaatcttcattcaca 1121 Query: 1066 gttggatggttcatttgtaccacgcaacaatatggaagaggctacactccttttaatgat 1125 ||||||||||||||||||||| ||||| |||||||||||||||| || ||| ||||||| Sbjct: 1122 gttggatggttcatttgtacctcgcaataatatggaagaggctattcttcttctaatgat 1181 Query: 1126 tctattgaggaagtttaatctgaggagggttgagcgggatcccactgtgatgcatcacct 1185 |||||| |||||||| ||||| | |||||||||||||||||| ||| | ||||||||||| Sbjct: 1182 tctattaaggaagttcaatctcaagagggttgagcgggatcctactataatgcatcacct 1241 Query: 1186 tacctttgcactgtccatgtcagggcagctaaaaccactggctatacaatttgaagaact 1245 ||| ||||| |||||||| |||||||||||||| |||| ||| |||||||||||||| | Sbjct: 1242 tacatttgctctgtccatctcagggcagctaaagtcactagctgtacaatttgaagaatt 1301 Query: 1246 gttacctggtctgctagacaaaagagaatggtcatacaatgttgcattgtgttacctagc 1305 ||||||||| |||| || |||||||| ||||||||||||||||| ||||||||||| || Sbjct: 1302 gttacctggcatgctggataaaagagagtggtcatacaatgttgcgttgtgttaccttgc 1361 Query: 1306 cgaaaaagatgattctactgccctgaatctactcaaaaggatactgaagtttggacagga 1365 ||| |||||||||| || ||||||||||| |||||||||||| | || | |||| | || Sbjct: 1362 agaagaagatgattcgacagccctgaatcttctcaaaaggatattaaaatctggagatga 1421 Query: 1366 ttctgacagtctcaaagaacttctcctagcttcaaaagtttgcgttgagaagggtgatca 1425 |||||||| | |||||||||| ||| |||||||||| | |||| ||| | | ||| || Sbjct: 1422 ttctgacaatttcaaagaactcctcttagcttcaaaggcttgcactgaaaggagtgccca 1481 Query: 1426 tgctgaaggtgctgcctatgcacggagggctataagtaatatacagggaggatgcaaaca 1485 ||||||||||| |||| |||| ||| || ||| ||||| ||||||||||| |||| Sbjct: 1482 aactgaaggtgcttcctacgcacagagagcaatagccaatatgcagggaggatgtgaaca 1541 Query: 1486 atttgcggctgttgcagattttttgcttggtgtttccctttctaatcaagctagatatgc 1545 | | |||| ||||||||| | ||||||| ||| |||||||||||||||||||| ||| Sbjct: 1542 aatggcgggtgttgcagacctgctgcttggagttaacctttctaatcaagctagatgtgc 1601 Query: 1546 tatatccgatactgagcgagcttcttggcagtgtgaagc 1584 | ||| ||||| ||| |||||||||||||||||||||| Sbjct: 1602 cacatctgatacagagagagcttcttggcagtgtgaagc 1640 Score = 575 bits (290), Expect = e-160 Identities = 706/846 (83%), Gaps = 2/846 (0%) Strand = Plus / Plus Query: 1639 aatgtacaatctgagccttgagaacgctgagcagaggaagttagatgcagcagtttttta 1698 |||||||| ||| |||||||| || ||||| ||||| || |||||||| || | ||||| Sbjct: 1695 aatgtacagtctcagccttgaaaatgctgaccagagaaaattagatgctgctgcctttta 1754 Query: 1699 tgcnnnnnnnctggtgaagttagaggctggatcagagttgaggagttggcttcttttagc 1758 ||| ||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 1755 tgccaagaaattggtgaaattagaggctggatcggaattgaggagttggcttcttttagc 1814 Query: 1759 tcgaatactaagtgcacaaaaactgtttgctgatgctgaaacagttgttgatgctgctct 1818 |||||||||| ||| || |||| |||||||||||||||||| || ||||||||||||| Sbjct: 1815 tcgaatactatctgctcagaaacagtttgctgatgctgaaaccattattgatgctgctct 1874 Query: 1819 tgatcagactgggaaatggaatcaaggagatttgttgcgaaccaaagctagaattcaggc 1878 ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| Sbjct: 1875 cgatcagactgggaaatggagtcaaggagatttattgcgaaccaaagccagaattcaggc 1934 Query: 1879 cgcacaagggcaattgagggatgcggttgggacatatacccaacttcttgctttaattca 1938 ||||| || ||| | ||| | || |||| |||||| ||| ||||||| ||| | ||||| Sbjct: 1935 tgcacagggccaactcaggaacgctgttgagacatacaccaaacttctcgctgtcattca 1994 Query: 1939 acttagaacaaaaagttttggagctgggatctcactggcaaagggtggcgaagatgataa 1998 ||| ||||| |||||| | | |||||||||| |||||||||| | ||||||| Sbjct: 1995 actcagaaccaaaagtctcagtgctgggatctttttggcaaagggcactaaggatgatat 2054 Query: 1999 aagcctggaaacagtgacctggtatgatctagctctcttgtacctaggcatgtcacagtg 2058 ||||||||||| || ||||||||||||||||||||| ||||||||| |||||||||| || Sbjct: 2055 aagcctggaaatagagacctggtatgatctagctctgttgtacctacgcatgtcacaatg 2114 Query: 2059 gagggatgcagaagtttgtgtatcaaagataagagctactagttgttattctgccttggc 2118 |||||||||||| || |||||||| |||||||| | | ||| |||||||||||||| Sbjct: 2115 gagggatgcagaggtctgtgtatccaagataaggaccatcagtccatattctgccttggc 2174 Query: 2119 ttggcatgctacaggaaaactatgtgaagcgaaagatcttccaaaagaagctttgggggc 2178 |||||||| || ||||||||| | |||||| |||| || ||||||||||| ||||| | Sbjct: 2175 ttggcatgttaaaggaaaactctatgaagcaaaaggtcaaccaaaagaagccttgggatc 2234 Query: 2179 ttattttcgagcattagactttgatggtaaacatgttccaagtttgatatcgactgctac 2238 ||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||| | Sbjct: 2235 ctatttcagagcattagaccttgaccgtaaacatgttccaagtttgatatcaactgcctc 2294 Query: 2239 tattctacgacaacttggggagacgccattgccttttgtaaggtgcttcctgactgatgc 2298 | |||| ||| || |||| | | ||||||||||| || ||||||| ||||| ||||| Sbjct: 2295 tgttcttcgagaaattggcaacaggccattgccttcggtccggtgctttctgaccgatgc 2354 Query: 2299 actgcaacttgatagaacaaaccacatggcatggtttaatcttggcctactctacaaaga 2358 ||||||| ||| ||||||| || ||| |||||||||||||| |||||||||||||| Sbjct: 2355 gttgcaactggatcgaacaaatcatgcggcttggtttaatcttgggctactctacaaaga 2414 Query: 2359 ggaaggtggcaggtcagcagctgaggctgctgaatgtttccaagctgctgcacttcttga 2418 ||||||||| |||||||||| || ||||| ||||||||||| || ||||| |||||||| Sbjct: 2415 ggaaggtggtcggtcagcagcagaagctgcagaatgtttccaggcggctgctcttcttga 2474 Query: 2419 ggaaacagcacctgtagaacctttcagataaca--tatatgtacaggggctatagaaatt 2476 |||||||||||||||||||||||||| | ||| | |||||||||| |||||||||| | Sbjct: 2475 agaaacagcacctgtagaacctttcaggtgacacttgtatgtacaggtgctatagaaact 2534 Query: 2477 gtaagc 2482 |||||| Sbjct: 2535 gtaagc 2540
>dbj|AK064870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J02, full insert sequence Length = 2709 Score = 1100 bits (555), Expect = 0.0 Identities = 1113/1299 (85%) Strand = Plus / Plus Query: 286 gaggggaagattaaggaactttgtccggcggatggcaatggagtgcctttgctctggaga 345 |||||| ||||| ||| ||| |||||||||||||||||||||||||| ||||| || || Sbjct: 330 gagggggagattgaggggcttcgtccggcggatggcaatggagtgcctgtgctccgggga 389 Query: 346 gcagctgaaaggggcagatgacaccatccggtcatcggactctacttttacgaaagattt 405 |||||||| | ||||||||| | |||||||||| |||| ||| | | || ||||||| Sbjct: 390 gcagctgagggcggcagatgagatcatccggtcaccggaatctgcaatcaccaaagattg 449 Query: 406 ctcagccagtgggtattcttccaggaatggagaagtcgagcaataccttgataatggcaa 465 ||| ||||| ||||| || ||| ||| ||||| | ||||| ||||||||||||||||| Sbjct: 450 ctcggccagcgggtactcgtcccagaacggagagatggagcagtaccttgataatggcaa 509 Query: 466 cattgaagaagctgagttatcactccgggagggcgtctgccttaattatgaggaagcaag 525 |||||| || || ||||| || ||||||||||| || |||||||| |||||||||||||| Sbjct: 510 cattgaggaggccgagttgtcgctccgggagggtgtttgccttaactatgaggaagcaag 569 Query: 526 ggcattgctaggaaggctagagtaccaacgaggacatgtagaagcagcacttcgtgtgtt 585 |||||| |||||||||||||||||||| || || ||||||||||||||||||||||| || Sbjct: 570 ggcattactaggaaggctagagtaccagcgtgggcatgtagaagcagcacttcgtgtatt 629 Query: 586 tgacgggatagacatatcttcattagttcctaagatgaaaatctcaatcgctagaaaagc 645 ||| ||||| || ||| || | ||||| |||||||||||||||||||| |||||||||| Sbjct: 630 tgatgggattgatatacctgctttagtccctaagatgaaaatctcaattgctagaaaagt 689 Query: 646 acatcgccgaaagactcgttcacaatgggatgctccaccaatgcccttgcatgctgtgag 705 |||| || ||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 690 ggatcgtcggaagactcgttcacaatgggattctccaccaatgcccttgcatgctgtcag 749 Query: 706 cctacttatggaggcaatatatctcaaagcaagagcacttcatgatctcggaaagttcaa 765 |||||| |||||||| ||||| || ||| ||||||| ||||||||||| ||||||||||| Sbjct: 750 cctactcatggaggccatataccttaaatcaagagctcttcatgatcttggaaagttcaa 809 Query: 766 agatgctgcacaagagtgcagaatgatattggatattgtggaagcagcagtacctgaagg 825 ||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 810 agaagctgcacaagaatgcagaatgatattggatatcgtggaagcagcagtgcctgaggg 869 Query: 826 cttaccagcaggcttcggaaaaggttgtaaattgaacgaaataatatgcaaggccgtaga 885 |||||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 870 tttaccagcaggctttggaaaagattgtaaattaaacgaaataatatgcaaggctgtaga 929 Query: 886 gtttctccctgagttatggaaattagcggggttttctcttgaagccatttctgaatacag 945 ||| |||||||| |||||||| ||| ||| ||||| ||||||||||| ||| ||| || Sbjct: 930 gttgctccctgaactatggaaactagggggattttcacttgaagccatatcttcatatag 989 Query: 946 gaggtctcttctcaataactggaatcttgatggagagaccatagctaaaatacaaaagga 1005 |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| || Sbjct: 990 gaggtctcttctcaataattggaaccttgatggagagaccatagctcgcatacaaaaaga 1049 Query: 1006 atttgctgtttttcttctgtacagtggctgcgaagcccgctctccaaatctccattctca 1065 |||||| ||||||| || || |||||||| ||||| || |||||||||| ||||| || Sbjct: 1050 atttgccatttttctcctatatagtggctgtgaagcacgacctccaaatcttcattcaca 1109 Query: 1066 gttggatggttcatttgtaccacgcaacaatatggaagaggctacactccttttaatgat 1125 ||||||||||||||||||||| ||||| |||||||||||||||| || ||| ||||||| Sbjct: 1110 gttggatggttcatttgtacctcgcaataatatggaagaggctattcttcttctaatgat 1169 Query: 1126 tctattgaggaagtttaatctgaggagggttgagcgggatcccactgtgatgcatcacct 1185 |||||| |||||||| ||||| | |||||||||||||||||| ||| | ||||||||||| Sbjct: 1170 tctattaaggaagttcaatctcaagagggttgagcgggatcctactataatgcatcacct 1229 Query: 1186 tacctttgcactgtccatgtcagggcagctaaaaccactggctatacaatttgaagaact 1245 ||| ||||| |||||||| |||||||||||||| |||| ||| |||||||||||||| | Sbjct: 1230 tacatttgctctgtccatctcagggcagctaaagtcactagctgtacaatttgaagaatt 1289 Query: 1246 gttacctggtctgctagacaaaagagaatggtcatacaatgttgcattgtgttacctagc 1305 ||||||||| |||| || |||||||| ||||||||||||||||| ||||||||||| || Sbjct: 1290 gttacctggcatgctggataaaagagagtggtcatacaatgttgcgttgtgttaccttgc 1349 Query: 1306 cgaaaaagatgattctactgccctgaatctactcaaaaggatactgaagtttggacagga 1365 ||| |||||||||| || ||||||||||| |||||||||||| | || | |||| | || Sbjct: 1350 agaagaagatgattcgacagccctgaatcttctcaaaaggatattaaaatctggagatga 1409 Query: 1366 ttctgacagtctcaaagaacttctcctagcttcaaaagtttgcgttgagaagggtgatca 1425 |||||||| | |||||||||| ||| |||||||||| | |||| ||| | | ||| || Sbjct: 1410 ttctgacaatttcaaagaactcctcttagcttcaaaggcttgcactgaaaggagtgccca 1469 Query: 1426 tgctgaaggtgctgcctatgcacggagggctataagtaatatacagggaggatgcaaaca 1485 ||||||||||| |||| |||| ||| || ||| ||||| ||||||||||| |||| Sbjct: 1470 aactgaaggtgcttcctacgcacagagagcaatagccaatatgcagggaggatgtgaaca 1529 Query: 1486 atttgcggctgttgcagattttttgcttggtgtttccctttctaatcaagctagatatgc 1545 | | |||| ||||||||| | ||||||| ||| |||||||||||||||||||| ||| Sbjct: 1530 aatggcgggtgttgcagacctgctgcttggagttaacctttctaatcaagctagatgtgc 1589 Query: 1546 tatatccgatactgagcgagcttcttggcagtgtgaagc 1584 | ||| ||||| ||| |||||||||||||||||||||| Sbjct: 1590 cacatctgatacagagagagcttcttggcagtgtgaagc 1628 Score = 575 bits (290), Expect = e-160 Identities = 706/846 (83%), Gaps = 2/846 (0%) Strand = Plus / Plus Query: 1639 aatgtacaatctgagccttgagaacgctgagcagaggaagttagatgcagcagtttttta 1698 |||||||| ||| |||||||| || ||||| ||||| || |||||||| || | ||||| Sbjct: 1683 aatgtacagtctcagccttgaaaatgctgaccagagaaaattagatgctgctgcctttta 1742 Query: 1699 tgcnnnnnnnctggtgaagttagaggctggatcagagttgaggagttggcttcttttagc 1758 ||| ||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 1743 tgccaagaaattggtgaaattagaggctggatcggaattgaggagttggcttcttttagc 1802 Query: 1759 tcgaatactaagtgcacaaaaactgtttgctgatgctgaaacagttgttgatgctgctct 1818 |||||||||| ||| || |||| |||||||||||||||||| || ||||||||||||| Sbjct: 1803 tcgaatactatctgctcagaaacagtttgctgatgctgaaaccattattgatgctgctct 1862 Query: 1819 tgatcagactgggaaatggaatcaaggagatttgttgcgaaccaaagctagaattcaggc 1878 ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| Sbjct: 1863 cgatcagactgggaaatggagtcaaggagatttattgcgaaccaaagccagaattcaggc 1922 Query: 1879 cgcacaagggcaattgagggatgcggttgggacatatacccaacttcttgctttaattca 1938 ||||| || ||| | ||| | || |||| |||||| ||| ||||||| ||| | ||||| Sbjct: 1923 tgcacagggccaactcaggaacgctgttgagacatacaccaaacttctcgctgtcattca 1982 Query: 1939 acttagaacaaaaagttttggagctgggatctcactggcaaagggtggcgaagatgataa 1998 ||| ||||| |||||| | | |||||||||| |||||||||| | ||||||| Sbjct: 1983 actcagaaccaaaagtctcagtgctgggatctttttggcaaagggcactaaggatgatat 2042 Query: 1999 aagcctggaaacagtgacctggtatgatctagctctcttgtacctaggcatgtcacagtg 2058 ||||||||||| || ||||||||||||||||||||| ||||||||| |||||||||| || Sbjct: 2043 aagcctggaaatagagacctggtatgatctagctctgttgtacctacgcatgtcacaatg 2102 Query: 2059 gagggatgcagaagtttgtgtatcaaagataagagctactagttgttattctgccttggc 2118 |||||||||||| || |||||||| |||||||| | | ||| |||||||||||||| Sbjct: 2103 gagggatgcagaggtctgtgtatccaagataaggaccatcagtccatattctgccttggc 2162 Query: 2119 ttggcatgctacaggaaaactatgtgaagcgaaagatcttccaaaagaagctttgggggc 2178 |||||||| || ||||||||| | |||||| |||| || ||||||||||| ||||| | Sbjct: 2163 ttggcatgttaaaggaaaactctatgaagcaaaaggtcaaccaaaagaagccttgggatc 2222 Query: 2179 ttattttcgagcattagactttgatggtaaacatgttccaagtttgatatcgactgctac 2238 ||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||| | Sbjct: 2223 ctatttcagagcattagaccttgaccgtaaacatgttccaagtttgatatcaactgcctc 2282 Query: 2239 tattctacgacaacttggggagacgccattgccttttgtaaggtgcttcctgactgatgc 2298 | |||| ||| || |||| | | ||||||||||| || ||||||| ||||| ||||| Sbjct: 2283 tgttcttcgagaaattggcaacaggccattgccttcggtccggtgctttctgaccgatgc 2342 Query: 2299 actgcaacttgatagaacaaaccacatggcatggtttaatcttggcctactctacaaaga 2358 ||||||| ||| ||||||| || ||| |||||||||||||| |||||||||||||| Sbjct: 2343 gttgcaactggatcgaacaaatcatgcggcttggtttaatcttgggctactctacaaaga 2402 Query: 2359 ggaaggtggcaggtcagcagctgaggctgctgaatgtttccaagctgctgcacttcttga 2418 ||||||||| |||||||||| || ||||| ||||||||||| || ||||| |||||||| Sbjct: 2403 ggaaggtggtcggtcagcagcagaagctgcagaatgtttccaggcggctgctcttcttga 2462 Query: 2419 ggaaacagcacctgtagaacctttcagataaca--tatatgtacaggggctatagaaatt 2476 |||||||||||||||||||||||||| | ||| | |||||||||| |||||||||| | Sbjct: 2463 agaaacagcacctgtagaacctttcaggtgacacttgtatgtacaggtgctatagaaact 2522 Query: 2477 gtaagc 2482 |||||| Sbjct: 2523 gtaagc 2528
>dbj|AK067894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D09, full insert sequence Length = 4032 Score = 1094 bits (552), Expect = 0.0 Identities = 1114/1300 (85%), Gaps = 1/1300 (0%) Strand = Plus / Plus Query: 286 gaggggaagattaaggaactttgtccggcggatggcaatggagtgcctttgctctggaga 345 |||||| ||||| ||| ||| |||||||||||||||||||||||||| ||||| || || Sbjct: 343 gagggggagattgaggggcttcgtccggcggatggcaatggagtgcctgtgctccgggga 402 Query: 346 gcagctgaaaggggcagatgacaccatccggtcatcggactctacttttacgaaagattt 405 |||||||| | ||||||||| | |||||||||| |||| ||| | | || ||||||| Sbjct: 403 gcagctgagggcggcagatgagatcatccggtcaccggaatctgcaatcaccaaagattg 462 Query: 406 ctcagccagtgggtattcttccaggaatggagaagtcgagcaataccttgataatggcaa 465 ||| ||||| ||||| || ||| ||| ||||| ||||||| ||||||||||||||||| Sbjct: 463 ctcggccagcgggtactcgtcccagaacggagagatcgagcagtaccttgataatggcaa 522 Query: 466 cattgaagaagctgagttatcactccgggagggcgtctgccttaattatgaggaagcaag 525 |||||| || || ||||| || ||||||||||| || |||||||| |||||||||||||| Sbjct: 523 cattgaggaggccgagttgtcgctccgggagggtgtttgccttaactatgaggaagcaag 582 Query: 526 ggcattgctaggaaggctagagtaccaacgaggacatgtagaagcagcacttcgtgtgtt 585 |||||| |||||||||||||||||||| || || ||||||||||||||||||||||| || Sbjct: 583 ggcattactaggaaggctagagtaccagcgtgggcatgtagaagcagcacttcgtgtatt 642 Query: 586 tgacgggatagacatatcttcattagttcctaagatgaaaatctcaatcgctagaaaagc 645 ||| ||||| || ||| || | ||||| |||||||||||||||||||| |||||||||| Sbjct: 643 tgatgggattgatatacctgctttagtccctaagatgaaaatctcaattgctagaaaagt 702 Query: 646 acatcgccgaaagactcgttcacaatgggatgctccaccaatgcccttgcatgctgtgag 705 |||| || ||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 703 ggatcgtcggaagactcgttcacaatgggattctccaccaatgcccttgcatgctgtcag 762 Query: 706 cctacttatggaggcaatatatctcaaagcaagagcacttcatgatctcggaaagttcaa 765 |||||| |||||||| ||||| || ||| ||||||| ||||||||||| ||||||||||| Sbjct: 763 cctactcatggaggccatataccttaaatcaagagctcttcatgatcttggaaagttcaa 822 Query: 766 agatgctgcacaagagtgcagaatgatattggatattgtggaagcagcagtacctgaagg 825 ||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 823 agaagctgcacaagaatgcagaatgatattggatatcgtggaagcagcagtgcctgaggg 882 Query: 826 cttaccagcaggcttcggaaaaggttgtaaattgaacgaaataatatgcaaggccgtaga 885 |||||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 883 tttaccagcaggctttggaaaagattgtaaattaaacgaaataatatgcaaggctgtaga 942 Query: 886 gtttctccctgagttatggaaattagcggggttttctcttgaagccatttctgaatacag 945 ||| |||||||| |||||||| ||| ||| ||||| ||||||||||| ||| ||| || Sbjct: 943 gttgctccctgaactatggaaactagggggattttcacttgaagccatatcttcatatag 1002 Query: 946 gaggtctcttctcaataactggaatcttgatggagagaccatagctaaaatacaaaagga 1005 |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| || Sbjct: 1003 gaggtctcttctcaataattggaaccttgatggagagaccatagctcgcatacaaaaaga 1062 Query: 1006 atttgctgtttttcttctgtacagt-ggctgcgaagcccgctctccaaatctccattctc 1064 |||||| ||||||| || || ||| ||||| ||||| || |||||||||| ||||| | Sbjct: 1063 atttgccatttttctcctatatagtgggctgtgaagcacgacctccaaatcttcattcac 1122 Query: 1065 agttggatggttcatttgtaccacgcaacaatatggaagaggctacactccttttaatga 1124 |||||||||||||||||||||| ||||| |||||||||||||||| || ||| |||||| Sbjct: 1123 agttggatggttcatttgtacctcgcaataatatggaagaggctattcttcttctaatga 1182 Query: 1125 ttctattgaggaagtttaatctgaggagggttgagcgggatcccactgtgatgcatcacc 1184 ||||||| |||||||| ||||| | |||||||||||||||||| ||| | |||||||||| Sbjct: 1183 ttctattaaggaagttcaatctcaagagggttgagcgggatcctactataatgcatcacc 1242 Query: 1185 ttacctttgcactgtccatgtcagggcagctaaaaccactggctatacaatttgaagaac 1244 |||| ||||| |||||||| |||||||||||||| |||| ||| |||||||||||||| Sbjct: 1243 ttacatttgctctgtccatctcagggcagctaaagtcactagctgtacaatttgaagaat 1302 Query: 1245 tgttacctggtctgctagacaaaagagaatggtcatacaatgttgcattgtgttacctag 1304 |||||||||| |||| || |||||||| ||||||||||||||||| ||||||||||| | Sbjct: 1303 tgttacctggcatgctggataaaagagagtggtcatacaatgttgcgttgtgttaccttg 1362 Query: 1305 ccgaaaaagatgattctactgccctgaatctactcaaaaggatactgaagtttggacagg 1364 | ||| |||||||||| || ||||||||||| |||||||||||| | || | |||| | | Sbjct: 1363 cagaagaagatgattcgacagccctgaatcttctcaaaaggatattaaaatctggagatg 1422 Query: 1365 attctgacagtctcaaagaacttctcctagcttcaaaagtttgcgttgagaagggtgatc 1424 ||||||||| | |||||||||| ||| |||||||||| | |||| ||| | | ||| | Sbjct: 1423 attctgacaatttcaaagaactcctcttagcttcaaaggcttgcactgaaaggagtgccc 1482 Query: 1425 atgctgaaggtgctgcctatgcacggagggctataagtaatatacagggaggatgcaaac 1484 | ||||||||||| |||| |||| ||| || ||| ||||| ||||||||||| ||| Sbjct: 1483 aaactgaaggtgcttcctacgcacagagagcaatagccaatatgcagggaggatgtgaac 1542 Query: 1485 aatttgcggctgttgcagattttttgcttggtgtttccctttctaatcaagctagatatg 1544 || | |||| ||||||||| | ||||||| ||| |||||||||||||||||||| || Sbjct: 1543 aaatggcgggtgttgcagacctgctgcttggagttaacctttctaatcaagctagatgtg 1602 Query: 1545 ctatatccgatactgagcgagcttcttggcagtgtgaagc 1584 | | ||| ||||| ||| |||||||||||||||||||||| Sbjct: 1603 ccacatctgatacagagagagcttcttggcagtgtgaagc 1642 Score = 575 bits (290), Expect = e-160 Identities = 706/846 (83%), Gaps = 2/846 (0%) Strand = Plus / Plus Query: 1639 aatgtacaatctgagccttgagaacgctgagcagaggaagttagatgcagcagtttttta 1698 |||||||| ||| |||||||| || ||||| ||||| || |||||||| || | ||||| Sbjct: 1697 aatgtacagtctcagccttgaaaatgctgaccagagaaaattagatgctgctgcctttta 1756 Query: 1699 tgcnnnnnnnctggtgaagttagaggctggatcagagttgaggagttggcttcttttagc 1758 ||| ||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 1757 tgccaagaaattggtgaaattagaggctggatcggaattgaggagttggcttcttttagc 1816 Query: 1759 tcgaatactaagtgcacaaaaactgtttgctgatgctgaaacagttgttgatgctgctct 1818 |||||||||| ||| || |||| |||||||||||||||||| || ||||||||||||| Sbjct: 1817 tcgaatactatctgctcagaaacagtttgctgatgctgaaaccattattgatgctgctct 1876 Query: 1819 tgatcagactgggaaatggaatcaaggagatttgttgcgaaccaaagctagaattcaggc 1878 ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| Sbjct: 1877 cgatcagactgggaaatggagtcaaggagatttattgcgaaccaaagccagaattcaggc 1936 Query: 1879 cgcacaagggcaattgagggatgcggttgggacatatacccaacttcttgctttaattca 1938 ||||| || ||| | ||| | || |||| |||||| ||| ||||||| ||| | ||||| Sbjct: 1937 tgcacagggccaactcaggaacgctgttgagacatacaccaaacttctcgctgtcattca 1996 Query: 1939 acttagaacaaaaagttttggagctgggatctcactggcaaagggtggcgaagatgataa 1998 ||| ||||| |||||| | | |||||||||| |||||||||| | ||||||| Sbjct: 1997 actcagaaccaaaagtctcagtgctgggatctttttggcaaagggcactaaggatgatat 2056 Query: 1999 aagcctggaaacagtgacctggtatgatctagctctcttgtacctaggcatgtcacagtg 2058 ||||||||||| || ||||||||||||||||||||| ||||||||| |||||||||| || Sbjct: 2057 aagcctggaaatagagacctggtatgatctagctctgttgtacctacgcatgtcacaatg 2116 Query: 2059 gagggatgcagaagtttgtgtatcaaagataagagctactagttgttattctgccttggc 2118 |||||||||||| || |||||||| |||||||| | | ||| |||||||||||||| Sbjct: 2117 gagggatgcagaggtctgtgtatccaagataaggaccatcagtccatattctgccttggc 2176 Query: 2119 ttggcatgctacaggaaaactatgtgaagcgaaagatcttccaaaagaagctttgggggc 2178 |||||||| || ||||||||| | |||||| |||| || ||||||||||| ||||| | Sbjct: 2177 ttggcatgttaaaggaaaactctatgaagcaaaaggtcaaccaaaagaagccttgggatc 2236 Query: 2179 ttattttcgagcattagactttgatggtaaacatgttccaagtttgatatcgactgctac 2238 ||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||| | Sbjct: 2237 ctatttcagagcattagaccttgaccgtaaacatgttccaagtttgatatcaactgcctc 2296 Query: 2239 tattctacgacaacttggggagacgccattgccttttgtaaggtgcttcctgactgatgc 2298 | |||| ||| || |||| | | ||||||||||| || ||||||| ||||| ||||| Sbjct: 2297 tgttcttcgagaaattggcaacaggccattgccttcggtccggtgctttctgaccgatgc 2356 Query: 2299 actgcaacttgatagaacaaaccacatggcatggtttaatcttggcctactctacaaaga 2358 ||||||| ||| ||||||| || ||| |||||||||||||| |||||||||||||| Sbjct: 2357 gttgcaactggatcgaacaaatcatgcggcttggtttaatcttgggctactctacaaaga 2416 Query: 2359 ggaaggtggcaggtcagcagctgaggctgctgaatgtttccaagctgctgcacttcttga 2418 ||||||||| |||||||||| || ||||| ||||||||||| || ||||| |||||||| Sbjct: 2417 ggaaggtggtcggtcagcagcagaagctgcagaatgtttccaggcggctgctcttcttga 2476 Query: 2419 ggaaacagcacctgtagaacctttcagataaca--tatatgtacaggggctatagaaatt 2476 |||||||||||||||||||||||||| | ||| | |||||||||| |||||||||| | Sbjct: 2477 agaaacagcacctgtagaacctttcaggtgacacttgtatgtacaggtgctatagaaact 2536 Query: 2477 gtaagc 2482 |||||| Sbjct: 2537 gtaagc 2542
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 680 bits (343), Expect = 0.0 Identities = 697/815 (85%) Strand = Plus / Minus Query: 770 gctgcacaagagtgcagaatgatattggatattgtggaagcagcagtacctgaaggctta 829 ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| || ||| Sbjct: 16973813 gctgcacaagaatgcagaatgatattggatatcgtggaagcagcagtgcctgagggttta 16973754 Query: 830 ccagcaggcttcggaaaaggttgtaaattgaacgaaataatatgcaaggccgtagagttt 889 ||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||| Sbjct: 16973753 ccagcaggctttggaaaagattgtaaattaaacgaaataatatgcaaggctgtagagttg 16973694 Query: 890 ctccctgagttatggaaattagcggggttttctcttgaagccatttctgaatacaggagg 949 |||||||| |||||||| ||| ||| ||||| ||||||||||| ||| ||| |||||| Sbjct: 16973693 ctccctgaactatggaaactagggggattttcacttgaagccatatcttcatataggagg 16973634 Query: 950 tctcttctcaataactggaatcttgatggagagaccatagctaaaatacaaaaggaattt 1009 |||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||| Sbjct: 16973633 tctcttctcaataattggaaccttgatggagagaccatagctcgcatacaaaaagaattt 16973574 Query: 1010 gctgtttttcttctgtacagtggctgcgaagcccgctctccaaatctccattctcagttg 1069 || ||||||| || || |||||||| ||||| || |||||||||| ||||| |||||| Sbjct: 16973573 gccatttttctcctatatagtggctgtgaagcacgacctccaaatcttcattcacagttg 16973514 Query: 1070 gatggttcatttgtaccacgcaacaatatggaagaggctacactccttttaatgattcta 1129 ||||||||||||||||| ||||| |||||||||||||||| || ||| ||||||||||| Sbjct: 16973513 gatggttcatttgtacctcgcaataatatggaagaggctattcttcttctaatgattcta 16973454 Query: 1130 ttgaggaagtttaatctgaggagggttgagcgggatcccactgtgatgcatcaccttacc 1189 || |||||||| ||||| | |||||||||||||||||| ||| | |||||||||||||| Sbjct: 16973453 ttaaggaagttcaatctcaagagggttgagcgggatcctactataatgcatcaccttaca 16973394 Query: 1190 tttgcactgtccatgtcagggcagctaaaaccactggctatacaatttgaagaactgtta 1249 ||||| |||||||| |||||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 16973393 tttgctctgtccatctcagggcagctaaagtcactagctgtacaatttgaagaattgtta 16973334 Query: 1250 cctggtctgctagacaaaagagaatggtcatacaatgttgcattgtgttacctagccgaa 1309 ||||| |||| || |||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct: 16973333 cctggcatgctggataaaagagagtggtcatacaatgttgcgttgtgttaccttgcagaa 16973274 Query: 1310 aaagatgattctactgccctgaatctactcaaaaggatactgaagtttggacaggattct 1369 |||||||||| || ||||||||||| |||||||||||| | || | |||| | |||||| Sbjct: 16973273 gaagatgattcgacagccctgaatcttctcaaaaggatattaaaatctggagatgattct 16973214 Query: 1370 gacagtctcaaagaacttctcctagcttcaaaagtttgcgttgagaagggtgatcatgct 1429 |||| | |||||||||| ||| |||||||||| | |||| ||| | | ||| || || Sbjct: 16973213 gacaatttcaaagaactcctcttagcttcaaaggcttgcactgaaaggagtgcccaaact 16973154 Query: 1430 gaaggtgctgcctatgcacggagggctataagtaatatacagggaggatgcaaacaattt 1489 ||||||||| |||| |||| ||| || ||| ||||| ||||||||||| ||||| | Sbjct: 16973153 gaaggtgcttcctacgcacagagagcaatagccaatatgcagggaggatgtgaacaaatg 16973094 Query: 1490 gcggctgttgcagattttttgcttggtgtttccctttctaatcaagctagatatgctata 1549 |||| ||||||||| | ||||||| ||| |||||||||||||||||||| ||| | | Sbjct: 16973093 gcgggtgttgcagacctgctgcttggagttaacctttctaatcaagctagatgtgccaca 16973034 Query: 1550 tccgatactgagcgagcttcttggcagtgtgaagc 1584 || ||||| ||| |||||||||||||||||||||| Sbjct: 16973033 tctgatacagagagagcttcttggcagtgtgaagc 16972999 Score = 285 bits (144), Expect = 4e-73 Identities = 225/252 (89%) Strand = Plus / Minus Query: 516 aggaagcaagggcattgctaggaaggctagagtaccaacgaggacatgtagaagcagcac 575 |||||||||||||||| |||||||||||||||||||| || || |||||||||||||||| Sbjct: 16974184 aggaagcaagggcattactaggaaggctagagtaccagcgtgggcatgtagaagcagcac 16974125 Query: 576 ttcgtgtgtttgacgggatagacatatcttcattagttcctaagatgaaaatctcaatcg 635 ||||||| ||||| ||||| || ||| || | ||||| |||||||||||||||||||| | Sbjct: 16974124 ttcgtgtatttgatgggattgatatacctgctttagtccctaagatgaaaatctcaattg 16974065 Query: 636 ctagaaaagcacatcgccgaaagactcgttcacaatgggatgctccaccaatgcccttgc 695 ||||||||| |||| || ||||||||||||||||||||| |||||||||||||||||| Sbjct: 16974064 ctagaaaagtggatcgtcggaagactcgttcacaatgggattctccaccaatgcccttgc 16974005 Query: 696 atgctgtgagcctacttatggaggcaatatatctcaaagcaagagcacttcatgatctcg 755 ||||||| |||||||| |||||||| ||||| || ||| ||||||| ||||||||||| | Sbjct: 16974004 atgctgtcagcctactcatggaggccatataccttaaatcaagagctcttcatgatcttg 16973945 Query: 756 gaaagttcaaag 767 |||||||||||| Sbjct: 16973944 gaaagttcaaag 16973933 Score = 244 bits (123), Expect = 1e-60 Identities = 266/316 (84%) Strand = Plus / Minus Query: 1639 aatgtacaatctgagccttgagaacgctgagcagaggaagttagatgcagcagtttttta 1698 |||||||| ||| |||||||| || ||||| ||||| || |||||||| || | ||||| Sbjct: 16972944 aatgtacagtctcagccttgaaaatgctgaccagagaaaattagatgctgctgcctttta 16972885 Query: 1699 tgcnnnnnnnctggtgaagttagaggctggatcagagttgaggagttggcttcttttagc 1758 ||| ||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 16972884 tgccaagaaattggtgaaattagaggctggatcggaattgaggagttggcttcttttagc 16972825 Query: 1759 tcgaatactaagtgcacaaaaactgtttgctgatgctgaaacagttgttgatgctgctct 1818 |||||||||| ||| || |||| |||||||||||||||||| || ||||||||||||| Sbjct: 16972824 tcgaatactatctgctcagaaacagtttgctgatgctgaaaccattattgatgctgctct 16972765 Query: 1819 tgatcagactgggaaatggaatcaaggagatttgttgcgaaccaaagctagaattcaggc 1878 ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| Sbjct: 16972764 cgatcagactgggaaatggagtcaaggagatttattgcgaaccaaagccagaattcaggc 16972705 Query: 1879 cgcacaagggcaattgagggatgcggttgggacatatacccaacttcttgctttaattca 1938 ||||| || ||| | ||| | || |||| |||||| ||| ||||||| ||| | ||||| Sbjct: 16972704 tgcacagggccaactcaggaacgctgttgagacatacaccaaacttctcgctgtcattca 16972645 Query: 1939 acttagaacaaaaagt 1954 ||| ||||| |||||| Sbjct: 16972644 actcagaaccaaaagt 16972629 Score = 238 bits (120), Expect = 8e-59 Identities = 297/355 (83%), Gaps = 2/355 (0%) Strand = Plus / Minus Query: 2130 caggaaaactatgtgaagcgaaagatcttccaaaagaagctttgggggcttattttcgag 2189 |||||||||| | |||||| |||| || ||||||||||| ||||| | ||||| ||| Sbjct: 16971777 caggaaaactctatgaagcaaaaggtcaaccaaaagaagccttgggatcctatttcagag 16971718 Query: 2190 cattagactttgatggtaaacatgttccaagtttgatatcgactgctactattctacgac 2249 |||||||| |||| ||||||||||||||||||||||||| ||||| || |||| ||| Sbjct: 16971717 cattagaccttgaccgtaaacatgttccaagtttgatatcaactgcctctgttcttcgag 16971658 Query: 2250 aacttggggagacgccattgccttttgtaaggtgcttcctgactgatgcactgcaacttg 2309 || |||| | | ||||||||||| || ||||||| ||||| ||||| ||||||| | Sbjct: 16971657 aaattggcaacaggccattgccttcggtccggtgctttctgaccgatgcgttgcaactgg 16971598 Query: 2310 atagaacaaaccacatggcatggtttaatcttggcctactctacaaagaggaaggtggca 2369 || ||||||| || ||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 16971597 atcgaacaaatcatgcggcttggtttaatcttgggctactctacaaagaggaaggtggtc 16971538 Query: 2370 ggtcagcagctgaggctgctgaatgtttccaagctgctgcacttcttgaggaaacagcac 2429 |||||||||| || ||||| ||||||||||| || ||||| |||||||| |||||||||| Sbjct: 16971537 ggtcagcagcagaagctgcagaatgtttccaggcggctgctcttcttgaagaaacagcac 16971478 Query: 2430 ctgtagaacctttcagataaca--tatatgtacaggggctatagaaattgtaagc 2482 |||||||||||||||| | ||| | |||||||||| |||||||||| ||||||| Sbjct: 16971477 ctgtagaacctttcaggtgacacttgtatgtacaggtgctatagaaactgtaagc 16971423 Score = 153 bits (77), Expect = 4e-33 Identities = 194/233 (83%) Strand = Plus / Minus Query: 286 gaggggaagattaaggaactttgtccggcggatggcaatggagtgcctttgctctggaga 345 |||||| ||||| ||| ||| |||||||||||||||||||||||||| ||||| || || Sbjct: 16975015 gagggggagattgaggggcttcgtccggcggatggcaatggagtgcctgtgctccgggga 16974956 Query: 346 gcagctgaaaggggcagatgacaccatccggtcatcggactctacttttacgaaagattt 405 |||||||| | ||||||||| | |||||||||| |||| ||| | | || ||||||| Sbjct: 16974955 gcagctgagggcggcagatgagatcatccggtcaccggaatctgcaatcaccaaagattg 16974896 Query: 406 ctcagccagtgggtattcttccaggaatggagaagtcgagcaataccttgataatggcaa 465 ||| ||||| ||||| || ||| ||| ||||| ||||||| ||||||||||||||||| Sbjct: 16974895 ctcggccagcgggtactcgtcccagaacggagagatcgagcagtaccttgataatggcaa 16974836 Query: 466 cattgaagaagctgagttatcactccgggagggcgtctgccttaattatgagg 518 |||||| || || ||||| || ||||||||||| || |||||||| ||||||| Sbjct: 16974835 cattgaggaggccgagttgtcgctccgggagggtgtttgccttaactatgagg 16974783 Score = 135 bits (68), Expect = 9e-28 Identities = 119/136 (87%) Strand = Plus / Minus Query: 1991 gatgataaaagcctggaaacagtgacctggtatgatctagctctcttgtacctaggcatg 2050 ||||||| ||||||||||| || ||||||||||||||||||||| ||||||||| ||||| Sbjct: 16972130 gatgatataagcctggaaatagagacctggtatgatctagctctgttgtacctacgcatg 16972071 Query: 2051 tcacagtggagggatgcagaagtttgtgtatcaaagataagagctactagttgttattct 2110 ||||| |||||||||||||| || |||||||| |||||||| | | ||| |||||| Sbjct: 16972070 tcacaatggagggatgcagaggtctgtgtatccaagataaggaccatcagtccatattct 16972011 Query: 2111 gccttggcttggcatg 2126 |||||||||||||||| Sbjct: 16972010 gccttggcttggcatg 16971995 Score = 54.0 bits (27), Expect = 0.003 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1991 gatgataaaagcctggaaacagtgacctggtatgatctagctctcttgtac 2041 |||||||||| ||||||| || ||| ||||||||| |||||||||||||| Sbjct: 8394537 gatgataaaatcctggaatgagagacatggtatgatttagctctcttgtac 8394587 Score = 48.1 bits (24), Expect = 0.16 Identities = 63/76 (82%) Strand = Plus / Plus Query: 2332 gtttaatcttggcctactctacaaagaggaaggtggcaggtcagcagctgaggctgctga 2391 |||||||||||| | ||||||||||||| ||||| || |||||| || | |||||| Sbjct: 8394951 gtttaatcttggggtgctctacaaagaggtaggtgatcagtgagcagcagaagttgctga 8395010 Query: 2392 atgtttccaagctgct 2407 ||||||||| |||||| Sbjct: 8395011 atgtttccaggctgct 8395026
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete sequence Length = 135216 Score = 680 bits (343), Expect = 0.0 Identities = 697/815 (85%) Strand = Plus / Minus Query: 770 gctgcacaagagtgcagaatgatattggatattgtggaagcagcagtacctgaaggctta 829 ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| || ||| Sbjct: 14305 gctgcacaagaatgcagaatgatattggatatcgtggaagcagcagtgcctgagggttta 14246 Query: 830 ccagcaggcttcggaaaaggttgtaaattgaacgaaataatatgcaaggccgtagagttt 889 ||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||| Sbjct: 14245 ccagcaggctttggaaaagattgtaaattaaacgaaataatatgcaaggctgtagagttg 14186 Query: 890 ctccctgagttatggaaattagcggggttttctcttgaagccatttctgaatacaggagg 949 |||||||| |||||||| ||| ||| ||||| ||||||||||| ||| ||| |||||| Sbjct: 14185 ctccctgaactatggaaactagggggattttcacttgaagccatatcttcatataggagg 14126 Query: 950 tctcttctcaataactggaatcttgatggagagaccatagctaaaatacaaaaggaattt 1009 |||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||| Sbjct: 14125 tctcttctcaataattggaaccttgatggagagaccatagctcgcatacaaaaagaattt 14066 Query: 1010 gctgtttttcttctgtacagtggctgcgaagcccgctctccaaatctccattctcagttg 1069 || ||||||| || || |||||||| ||||| || |||||||||| ||||| |||||| Sbjct: 14065 gccatttttctcctatatagtggctgtgaagcacgacctccaaatcttcattcacagttg 14006 Query: 1070 gatggttcatttgtaccacgcaacaatatggaagaggctacactccttttaatgattcta 1129 ||||||||||||||||| ||||| |||||||||||||||| || ||| ||||||||||| Sbjct: 14005 gatggttcatttgtacctcgcaataatatggaagaggctattcttcttctaatgattcta 13946 Query: 1130 ttgaggaagtttaatctgaggagggttgagcgggatcccactgtgatgcatcaccttacc 1189 || |||||||| ||||| | |||||||||||||||||| ||| | |||||||||||||| Sbjct: 13945 ttaaggaagttcaatctcaagagggttgagcgggatcctactataatgcatcaccttaca 13886 Query: 1190 tttgcactgtccatgtcagggcagctaaaaccactggctatacaatttgaagaactgtta 1249 ||||| |||||||| |||||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 13885 tttgctctgtccatctcagggcagctaaagtcactagctgtacaatttgaagaattgtta 13826 Query: 1250 cctggtctgctagacaaaagagaatggtcatacaatgttgcattgtgttacctagccgaa 1309 ||||| |||| || |||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct: 13825 cctggcatgctggataaaagagagtggtcatacaatgttgcgttgtgttaccttgcagaa 13766 Query: 1310 aaagatgattctactgccctgaatctactcaaaaggatactgaagtttggacaggattct 1369 |||||||||| || ||||||||||| |||||||||||| | || | |||| | |||||| Sbjct: 13765 gaagatgattcgacagccctgaatcttctcaaaaggatattaaaatctggagatgattct 13706 Query: 1370 gacagtctcaaagaacttctcctagcttcaaaagtttgcgttgagaagggtgatcatgct 1429 |||| | |||||||||| ||| |||||||||| | |||| ||| | | ||| || || Sbjct: 13705 gacaatttcaaagaactcctcttagcttcaaaggcttgcactgaaaggagtgcccaaact 13646 Query: 1430 gaaggtgctgcctatgcacggagggctataagtaatatacagggaggatgcaaacaattt 1489 ||||||||| |||| |||| ||| || ||| ||||| ||||||||||| ||||| | Sbjct: 13645 gaaggtgcttcctacgcacagagagcaatagccaatatgcagggaggatgtgaacaaatg 13586 Query: 1490 gcggctgttgcagattttttgcttggtgtttccctttctaatcaagctagatatgctata 1549 |||| ||||||||| | ||||||| ||| |||||||||||||||||||| ||| | | Sbjct: 13585 gcgggtgttgcagacctgctgcttggagttaacctttctaatcaagctagatgtgccaca 13526 Query: 1550 tccgatactgagcgagcttcttggcagtgtgaagc 1584 || ||||| ||| |||||||||||||||||||||| Sbjct: 13525 tctgatacagagagagcttcttggcagtgtgaagc 13491 Score = 285 bits (144), Expect = 4e-73 Identities = 225/252 (89%) Strand = Plus / Minus Query: 516 aggaagcaagggcattgctaggaaggctagagtaccaacgaggacatgtagaagcagcac 575 |||||||||||||||| |||||||||||||||||||| || || |||||||||||||||| Sbjct: 14676 aggaagcaagggcattactaggaaggctagagtaccagcgtgggcatgtagaagcagcac 14617 Query: 576 ttcgtgtgtttgacgggatagacatatcttcattagttcctaagatgaaaatctcaatcg 635 ||||||| ||||| ||||| || ||| || | ||||| |||||||||||||||||||| | Sbjct: 14616 ttcgtgtatttgatgggattgatatacctgctttagtccctaagatgaaaatctcaattg 14557 Query: 636 ctagaaaagcacatcgccgaaagactcgttcacaatgggatgctccaccaatgcccttgc 695 ||||||||| |||| || ||||||||||||||||||||| |||||||||||||||||| Sbjct: 14556 ctagaaaagtggatcgtcggaagactcgttcacaatgggattctccaccaatgcccttgc 14497 Query: 696 atgctgtgagcctacttatggaggcaatatatctcaaagcaagagcacttcatgatctcg 755 ||||||| |||||||| |||||||| ||||| || ||| ||||||| ||||||||||| | Sbjct: 14496 atgctgtcagcctactcatggaggccatataccttaaatcaagagctcttcatgatcttg 14437 Query: 756 gaaagttcaaag 767 |||||||||||| Sbjct: 14436 gaaagttcaaag 14425 Score = 244 bits (123), Expect = 1e-60 Identities = 266/316 (84%) Strand = Plus / Minus Query: 1639 aatgtacaatctgagccttgagaacgctgagcagaggaagttagatgcagcagtttttta 1698 |||||||| ||| |||||||| || ||||| ||||| || |||||||| || | ||||| Sbjct: 13436 aatgtacagtctcagccttgaaaatgctgaccagagaaaattagatgctgctgcctttta 13377 Query: 1699 tgcnnnnnnnctggtgaagttagaggctggatcagagttgaggagttggcttcttttagc 1758 ||| ||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct: 13376 tgccaagaaattggtgaaattagaggctggatcggaattgaggagttggcttcttttagc 13317 Query: 1759 tcgaatactaagtgcacaaaaactgtttgctgatgctgaaacagttgttgatgctgctct 1818 |||||||||| ||| || |||| |||||||||||||||||| || ||||||||||||| Sbjct: 13316 tcgaatactatctgctcagaaacagtttgctgatgctgaaaccattattgatgctgctct 13257 Query: 1819 tgatcagactgggaaatggaatcaaggagatttgttgcgaaccaaagctagaattcaggc 1878 ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| Sbjct: 13256 cgatcagactgggaaatggagtcaaggagatttattgcgaaccaaagccagaattcaggc 13197 Query: 1879 cgcacaagggcaattgagggatgcggttgggacatatacccaacttcttgctttaattca 1938 ||||| || ||| | ||| | || |||| |||||| ||| ||||||| ||| | ||||| Sbjct: 13196 tgcacagggccaactcaggaacgctgttgagacatacaccaaacttctcgctgtcattca 13137 Query: 1939 acttagaacaaaaagt 1954 ||| ||||| |||||| Sbjct: 13136 actcagaaccaaaagt 13121 Score = 238 bits (120), Expect = 8e-59 Identities = 297/355 (83%), Gaps = 2/355 (0%) Strand = Plus / Minus Query: 2130 caggaaaactatgtgaagcgaaagatcttccaaaagaagctttgggggcttattttcgag 2189 |||||||||| | |||||| |||| || ||||||||||| ||||| | ||||| ||| Sbjct: 12269 caggaaaactctatgaagcaaaaggtcaaccaaaagaagccttgggatcctatttcagag 12210 Query: 2190 cattagactttgatggtaaacatgttccaagtttgatatcgactgctactattctacgac 2249 |||||||| |||| ||||||||||||||||||||||||| ||||| || |||| ||| Sbjct: 12209 cattagaccttgaccgtaaacatgttccaagtttgatatcaactgcctctgttcttcgag 12150 Query: 2250 aacttggggagacgccattgccttttgtaaggtgcttcctgactgatgcactgcaacttg 2309 || |||| | | ||||||||||| || ||||||| ||||| ||||| ||||||| | Sbjct: 12149 aaattggcaacaggccattgccttcggtccggtgctttctgaccgatgcgttgcaactgg 12090 Query: 2310 atagaacaaaccacatggcatggtttaatcttggcctactctacaaagaggaaggtggca 2369 || ||||||| || ||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 12089 atcgaacaaatcatgcggcttggtttaatcttgggctactctacaaagaggaaggtggtc 12030 Query: 2370 ggtcagcagctgaggctgctgaatgtttccaagctgctgcacttcttgaggaaacagcac 2429 |||||||||| || ||||| ||||||||||| || ||||| |||||||| |||||||||| Sbjct: 12029 ggtcagcagcagaagctgcagaatgtttccaggcggctgctcttcttgaagaaacagcac 11970 Query: 2430 ctgtagaacctttcagataaca--tatatgtacaggggctatagaaattgtaagc 2482 |||||||||||||||| | ||| | |||||||||| |||||||||| ||||||| Sbjct: 11969 ctgtagaacctttcaggtgacacttgtatgtacaggtgctatagaaactgtaagc 11915 Score = 153 bits (77), Expect = 4e-33 Identities = 194/233 (83%) Strand = Plus / Minus Query: 286 gaggggaagattaaggaactttgtccggcggatggcaatggagtgcctttgctctggaga 345 |||||| ||||| ||| ||| |||||||||||||||||||||||||| ||||| || || Sbjct: 15507 gagggggagattgaggggcttcgtccggcggatggcaatggagtgcctgtgctccgggga 15448 Query: 346 gcagctgaaaggggcagatgacaccatccggtcatcggactctacttttacgaaagattt 405 |||||||| | ||||||||| | |||||||||| |||| ||| | | || ||||||| Sbjct: 15447 gcagctgagggcggcagatgagatcatccggtcaccggaatctgcaatcaccaaagattg 15388 Query: 406 ctcagccagtgggtattcttccaggaatggagaagtcgagcaataccttgataatggcaa 465 ||| ||||| ||||| || ||| ||| ||||| ||||||| ||||||||||||||||| Sbjct: 15387 ctcggccagcgggtactcgtcccagaacggagagatcgagcagtaccttgataatggcaa 15328 Query: 466 cattgaagaagctgagttatcactccgggagggcgtctgccttaattatgagg 518 |||||| || || ||||| || ||||||||||| || |||||||| ||||||| Sbjct: 15327 cattgaggaggccgagttgtcgctccgggagggtgtttgccttaactatgagg 15275 Score = 135 bits (68), Expect = 9e-28 Identities = 119/136 (87%) Strand = Plus / Minus Query: 1991 gatgataaaagcctggaaacagtgacctggtatgatctagctctcttgtacctaggcatg 2050 ||||||| ||||||||||| || ||||||||||||||||||||| ||||||||| ||||| Sbjct: 12622 gatgatataagcctggaaatagagacctggtatgatctagctctgttgtacctacgcatg 12563 Query: 2051 tcacagtggagggatgcagaagtttgtgtatcaaagataagagctactagttgttattct 2110 ||||| |||||||||||||| || |||||||| |||||||| | | ||| |||||| Sbjct: 12562 tcacaatggagggatgcagaggtctgtgtatccaagataaggaccatcagtccatattct 12503 Query: 2111 gccttggcttggcatg 2126 |||||||||||||||| Sbjct: 12502 gccttggcttggcatg 12487
>ref|NM_001055441.1| Oryza sativa (japonica cultivar-group) Os03g0138000 (Os03g0138000) mRNA, complete cds Length = 2719 Score = 256 bits (129), Expect = 4e-64 Identities = 386/469 (82%), Gaps = 2/469 (0%) Strand = Plus / Plus Query: 940 atacaggaggtctcttctcaataactggaatcttgatggagagaccatagctaaaataca 999 |||||||||| ||||| | ||||||||||||||||| | |||| || | || ||||| Sbjct: 984 atacaggagggctctttggagtaactggaatcttgatgaaaagacaattggtaggataca 1043 Query: 1000 aaaggaatttgctgtttttcttctgtacagtggctgcgaagcccgctctccaaatctcca 1059 |||||||||||| ||| |||| || || |||||||| ||| | ||||||| ||||| | Sbjct: 1044 aaaggaatttgcggttcttctcctatatagtggctgtgaaacttgctctccgaatcttct 1103 Query: 1060 ttctcagttggatggttcatttgtaccacgcaacaatatggaagaggctacactcctttt 1119 |||||||||||||| ||||||||||| || |||||| ||||||| || | || ||||| Sbjct: 1104 atctcagttggatggctcatttgtacctcggaacaatttggaagaagccattcttctttt 1163 Query: 1120 aatgattctattgaggaagtttaatctgaggagggttgagcgggatcccactgtgatgca 1179 |||| |||||||||||||||| ||||| | |||| | ||| |||| || || |||||||| Sbjct: 1164 aatgcttctattgaggaagttcaatcttaagaggctcgagagggacccaaccgtgatgca 1223 Query: 1180 tcaccttacctttgcactgtccatgtcagggcagctaaaaccactggctatacaatttga 1239 ||| || || |||||| ||||||||||||||||| |||||||||| ||||| || ||||| Sbjct: 1224 tcatctgacatttgcattgtccatgtcagggcagttaaaaccactagctattcagtttga 1283 Query: 1240 agaactgttacctggtctgctagacaaaagagaatggtcatacaatgttgcattgtgtta 1299 |||| | |||||||| | || |||| ||||| ||||| ||||||||||| ||||| || Sbjct: 1284 agaattattacctggagtattacacaacagagagtggtcgtacaatgttgctttgtgcta 1343 Query: 1300 cctagccgaaaaagatgattctact-gccctgaatctactcaaaaggatactgaagtttg 1358 |||||| ||| ||||||| |||| | ||||||||||| |||||||||||| || || || Sbjct: 1344 cctagcagaagaagatga-tctaatcgccctgaatctgctcaaaaggatattggtgtctg 1402 Query: 1359 gacaggattctgacagtctcaaagaacttctcctagcttcaaaagtttg 1407 || | ||||| | | |||||||||||||||||||| ||| ||| |||| Sbjct: 1403 gagaagattccaataatctcaaagaacttctcctagtttccaaaatttg 1451 Score = 111 bits (56), Expect = 1e-20 Identities = 176/216 (81%) Strand = Plus / Plus Query: 2209 acatgttccaagtttgatatcgactgctactattctacgacaacttggggagacgccatt 2268 |||||| |||||||||||||| || |||| | |||| |||| ||||| |||| || || Sbjct: 2256 acatgtaccaagtttgatatcaacagctattgttcttcgacggcttggcgagagaccctt 2315 Query: 2269 gccttttgtaaggtgcttcctgactgatgcactgcaacttgatagaacaaaccacatggc 2328 |||| ||||||||| ||||| ||||||||| ||||| | || |||||||| || || || Sbjct: 2316 gcctgctgtaaggtgtttcctaactgatgcattgcaattagacagaacaaatcatattgc 2375 Query: 2329 atggtttaatcttggcctactctacaaagaggaaggtggcaggtcagcagctgaggctgc 2388 ||||| || |||||| |||| ||| |||| ||||| ||||| |||||| ||| ||||| Sbjct: 2376 gtggttgaaccttggcttactatacgaagatgaagggggcagttcagcacttgaagctgc 2435 Query: 2389 tgaatgtttccaagctgctgcacttcttgaggaaac 2424 ||||||||| || ||||||| |||||||| ||||| Sbjct: 2436 tgaatgttttcagactgctgctcttcttgaagaaac 2471 Score = 63.9 bits (32), Expect = 3e-06 Identities = 143/180 (79%) Strand = Plus / Plus Query: 1991 gatgataaaagcctggaaacagtgacctggtatgatctagctctcttgtacctaggcatg 2050 ||||||| ||| ||||||| || ||| ||||||||||| | || |||| || | ||| Sbjct: 2038 gatgatagaagtctggaaatagagacgtggtatgatctggtccttctgtatataagaatg 2097 Query: 2051 tcacagtggagggatgcagaagtttgtgtatcaaagataagagctactagttgttattct 2110 ||||||||||||||||||||| ||| ||||||| |||| ||||| || || ||| Sbjct: 2098 tcacagtggagggatgcagaactttccatatcaaaaataaaagctatcagcccatactct 2157 Query: 2111 gccttggcttggcatgctacaggaaaactatgtgaagcgaaagatcttccaaaagaagct 2170 |||||||||| |||||||||||||| ||| |||||| |||| | ||| ||| |||||| Sbjct: 2158 gccttggcttttcatgctacaggaaagctacatgaagcaaaaggttttctaaaggaagct 2217 Score = 56.0 bits (28), Expect = 7e-04 Identities = 190/244 (77%) Strand = Plus / Plus Query: 1713 tgaagttagaggctggatcagagttgaggagttggcttcttttagctcgaatactaagtg 1772 |||| ||||||||||||||||| | | || |||||| ||| | ||||||||| | |||| Sbjct: 1760 tgaaattagaggctggatcagaactcaagacttggctccttatggctcgaataatgagtg 1819 Query: 1773 cacaaaaactgtttgctgatgctgaaacagttgttgatgctgctcttgatcagactggga 1832 | |||| || ||||| || ||||| | |||| |||| || || ||||||||||| | Sbjct: 1820 cccaaagacggtttgaagacgctgagtccattgtaaatgccgcgctagatcagactggaa 1879 Query: 1833 aatggaatcaaggagatttgttgcgaaccaaagctagaattcaggccgcacaagggcaat 1892 ||||| |||||||||||| |||| || ||||| | ||| ||||| ||||| || ||| Sbjct: 1880 aatggtttcaaggagatttattgcaaattaaagccaaaatgcaggctgcacagggtaaat 1939 Query: 1893 tgagggatgcggttgggacatatacccaacttcttgctttaattcaacttagaacaaaaa 1952 | | | | || |||| ||||||||||| ||||||||| | || || || || ||||||| Sbjct: 1940 ttaagaaagcagttgaaacatatacccagcttcttgctgtcatccagctaaggacaaaaa 1999 Query: 1953 gttt 1956 |||| Sbjct: 2000 gttt 2003 Score = 52.0 bits (26), Expect = 0.011 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1506 ttttgcttggtgtttccctttctaatcaagctagatatgcta 1547 |||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 1553 ttttgcttggcatttccctttccaatcaagctagatttgcta 1594
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 256 bits (129), Expect = 4e-64 Identities = 386/469 (82%), Gaps = 2/469 (0%) Strand = Plus / Plus Query: 940 atacaggaggtctcttctcaataactggaatcttgatggagagaccatagctaaaataca 999 |||||||||| ||||| | ||||||||||||||||| | |||| || | || ||||| Sbjct: 119015 atacaggagggctctttggagtaactggaatcttgatgaaaagacaattggtaggataca 119074 Query: 1000 aaaggaatttgctgtttttcttctgtacagtggctgcgaagcccgctctccaaatctcca 1059 |||||||||||| ||| |||| || || |||||||| ||| | ||||||| ||||| | Sbjct: 119075 aaaggaatttgcggttcttctcctatatagtggctgtgaaacttgctctccgaatcttct 119134 Query: 1060 ttctcagttggatggttcatttgtaccacgcaacaatatggaagaggctacactcctttt 1119 |||||||||||||| ||||||||||| || |||||| ||||||| || | || ||||| Sbjct: 119135 atctcagttggatggctcatttgtacctcggaacaatttggaagaagccattcttctttt 119194 Query: 1120 aatgattctattgaggaagtttaatctgaggagggttgagcgggatcccactgtgatgca 1179 |||| |||||||||||||||| ||||| | |||| | ||| |||| || || |||||||| Sbjct: 119195 aatgcttctattgaggaagttcaatcttaagaggctcgagagggacccaaccgtgatgca 119254 Query: 1180 tcaccttacctttgcactgtccatgtcagggcagctaaaaccactggctatacaatttga 1239 ||| || || |||||| ||||||||||||||||| |||||||||| ||||| || ||||| Sbjct: 119255 tcatctgacatttgcattgtccatgtcagggcagttaaaaccactagctattcagtttga 119314 Query: 1240 agaactgttacctggtctgctagacaaaagagaatggtcatacaatgttgcattgtgtta 1299 |||| | |||||||| | || |||| ||||| ||||| ||||||||||| ||||| || Sbjct: 119315 agaattattacctggagtattacacaacagagagtggtcgtacaatgttgctttgtgcta 119374 Query: 1300 cctagccgaaaaagatgattctact-gccctgaatctactcaaaaggatactgaagtttg 1358 |||||| ||| ||||||| |||| | ||||||||||| |||||||||||| || || || Sbjct: 119375 cctagcagaagaagatga-tctaatcgccctgaatctgctcaaaaggatattggtgtctg 119433 Query: 1359 gacaggattctgacagtctcaaagaacttctcctagcttcaaaagtttg 1407 || | ||||| | | |||||||||||||||||||| ||| ||| |||| Sbjct: 119434 gagaagattccaataatctcaaagaacttctcctagtttccaaaatttg 119482 Score = 111 bits (56), Expect = 1e-20 Identities = 176/216 (81%) Strand = Plus / Plus Query: 2209 acatgttccaagtttgatatcgactgctactattctacgacaacttggggagacgccatt 2268 |||||| |||||||||||||| || |||| | |||| |||| ||||| |||| || || Sbjct: 120734 acatgtaccaagtttgatatcaacagctattgttcttcgacggcttggcgagagaccctt 120793 Query: 2269 gccttttgtaaggtgcttcctgactgatgcactgcaacttgatagaacaaaccacatggc 2328 |||| ||||||||| ||||| ||||||||| ||||| | || |||||||| || || || Sbjct: 120794 gcctgctgtaaggtgtttcctaactgatgcattgcaattagacagaacaaatcatattgc 120853 Query: 2329 atggtttaatcttggcctactctacaaagaggaaggtggcaggtcagcagctgaggctgc 2388 ||||| || |||||| |||| ||| |||| ||||| ||||| |||||| ||| ||||| Sbjct: 120854 gtggttgaaccttggcttactatacgaagatgaagggggcagttcagcacttgaagctgc 120913 Query: 2389 tgaatgtttccaagctgctgcacttcttgaggaaac 2424 ||||||||| || ||||||| |||||||| ||||| Sbjct: 120914 tgaatgttttcagactgctgctcttcttgaagaaac 120949 Score = 56.0 bits (28), Expect = 7e-04 Identities = 190/244 (77%) Strand = Plus / Plus Query: 1713 tgaagttagaggctggatcagagttgaggagttggcttcttttagctcgaatactaagtg 1772 |||| ||||||||||||||||| | | || |||||| ||| | ||||||||| | |||| Sbjct: 119791 tgaaattagaggctggatcagaactcaagacttggctccttatggctcgaataatgagtg 119850 Query: 1773 cacaaaaactgtttgctgatgctgaaacagttgttgatgctgctcttgatcagactggga 1832 | |||| || ||||| || ||||| | |||| |||| || || ||||||||||| | Sbjct: 119851 cccaaagacggtttgaagacgctgagtccattgtaaatgccgcgctagatcagactggaa 119910 Query: 1833 aatggaatcaaggagatttgttgcgaaccaaagctagaattcaggccgcacaagggcaat 1892 ||||| |||||||||||| |||| || ||||| | ||| ||||| ||||| || ||| Sbjct: 119911 aatggtttcaaggagatttattgcaaattaaagccaaaatgcaggctgcacagggtaaat 119970 Query: 1893 tgagggatgcggttgggacatatacccaacttcttgctttaattcaacttagaacaaaaa 1952 | | | | || |||| ||||||||||| ||||||||| | || || || || ||||||| Sbjct: 119971 ttaagaaagcagttgaaacatatacccagcttcttgctgtcatccagctaaggacaaaaa 120030 Query: 1953 gttt 1956 |||| Sbjct: 120031 gttt 120034 Score = 54.0 bits (27), Expect = 0.003 Identities = 114/143 (79%) Strand = Plus / Plus Query: 1991 gatgataaaagcctggaaacagtgacctggtatgatctagctctcttgtacctaggcatg 2050 ||||||| ||| ||||||| || ||| ||||||||||| | || |||| || | ||| Sbjct: 120353 gatgatagaagtctggaaatagagacgtggtatgatctggtccttctgtatataagaatg 120412 Query: 2051 tcacagtggagggatgcagaagtttgtgtatcaaagataagagctactagttgttattct 2110 ||||||||||||||||||||| ||| ||||||| |||| ||||| || || ||| Sbjct: 120413 tcacagtggagggatgcagaactttccatatcaaaaataaaagctatcagcccatactct 120472 Query: 2111 gccttggcttggcatgctacagg 2133 |||||||||| ||||||||||| Sbjct: 120473 gccttggcttttcatgctacagg 120495 Score = 52.0 bits (26), Expect = 0.011 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1506 ttttgcttggtgtttccctttctaatcaagctagatatgcta 1547 |||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 119584 ttttgcttggcatttccctttccaatcaagctagatttgcta 119625
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 256 bits (129), Expect = 4e-64 Identities = 386/469 (82%), Gaps = 2/469 (0%) Strand = Plus / Plus Query: 940 atacaggaggtctcttctcaataactggaatcttgatggagagaccatagctaaaataca 999 |||||||||| ||||| | ||||||||||||||||| | |||| || | || ||||| Sbjct: 2081604 atacaggagggctctttggagtaactggaatcttgatgaaaagacaattggtaggataca 2081663 Query: 1000 aaaggaatttgctgtttttcttctgtacagtggctgcgaagcccgctctccaaatctcca 1059 |||||||||||| ||| |||| || || |||||||| ||| | ||||||| ||||| | Sbjct: 2081664 aaaggaatttgcggttcttctcctatatagtggctgtgaaacttgctctccgaatcttct 2081723 Query: 1060 ttctcagttggatggttcatttgtaccacgcaacaatatggaagaggctacactcctttt 1119 |||||||||||||| ||||||||||| || |||||| ||||||| || | || ||||| Sbjct: 2081724 atctcagttggatggctcatttgtacctcggaacaatttggaagaagccattcttctttt 2081783 Query: 1120 aatgattctattgaggaagtttaatctgaggagggttgagcgggatcccactgtgatgca 1179 |||| |||||||||||||||| ||||| | |||| | ||| |||| || || |||||||| Sbjct: 2081784 aatgcttctattgaggaagttcaatcttaagaggctcgagagggacccaaccgtgatgca 2081843 Query: 1180 tcaccttacctttgcactgtccatgtcagggcagctaaaaccactggctatacaatttga 1239 ||| || || |||||| ||||||||||||||||| |||||||||| ||||| || ||||| Sbjct: 2081844 tcatctgacatttgcattgtccatgtcagggcagttaaaaccactagctattcagtttga 2081903 Query: 1240 agaactgttacctggtctgctagacaaaagagaatggtcatacaatgttgcattgtgtta 1299 |||| | |||||||| | || |||| ||||| ||||| ||||||||||| ||||| || Sbjct: 2081904 agaattattacctggagtattacacaacagagagtggtcgtacaatgttgctttgtgcta 2081963 Query: 1300 cctagccgaaaaagatgattctact-gccctgaatctactcaaaaggatactgaagtttg 1358 |||||| ||| ||||||| |||| | ||||||||||| |||||||||||| || || || Sbjct: 2081964 cctagcagaagaagatga-tctaatcgccctgaatctgctcaaaaggatattggtgtctg 2082022 Query: 1359 gacaggattctgacagtctcaaagaacttctcctagcttcaaaagtttg 1407 || | ||||| | | |||||||||||||||||||| ||| ||| |||| Sbjct: 2082023 gagaagattccaataatctcaaagaacttctcctagtttccaaaatttg 2082071 Score = 111 bits (56), Expect = 1e-20 Identities = 176/216 (81%) Strand = Plus / Plus Query: 2209 acatgttccaagtttgatatcgactgctactattctacgacaacttggggagacgccatt 2268 |||||| |||||||||||||| || |||| | |||| |||| ||||| |||| || || Sbjct: 2083323 acatgtaccaagtttgatatcaacagctattgttcttcgacggcttggcgagagaccctt 2083382 Query: 2269 gccttttgtaaggtgcttcctgactgatgcactgcaacttgatagaacaaaccacatggc 2328 |||| ||||||||| ||||| ||||||||| ||||| | || |||||||| || || || Sbjct: 2083383 gcctgctgtaaggtgtttcctaactgatgcattgcaattagacagaacaaatcatattgc 2083442 Query: 2329 atggtttaatcttggcctactctacaaagaggaaggtggcaggtcagcagctgaggctgc 2388 ||||| || |||||| |||| ||| |||| ||||| ||||| |||||| ||| ||||| Sbjct: 2083443 gtggttgaaccttggcttactatacgaagatgaagggggcagttcagcacttgaagctgc 2083502 Query: 2389 tgaatgtttccaagctgctgcacttcttgaggaaac 2424 ||||||||| || ||||||| |||||||| ||||| Sbjct: 2083503 tgaatgttttcagactgctgctcttcttgaagaaac 2083538 Score = 56.0 bits (28), Expect = 7e-04 Identities = 190/244 (77%) Strand = Plus / Plus Query: 1713 tgaagttagaggctggatcagagttgaggagttggcttcttttagctcgaatactaagtg 1772 |||| ||||||||||||||||| | | || |||||| ||| | ||||||||| | |||| Sbjct: 2082380 tgaaattagaggctggatcagaactcaagacttggctccttatggctcgaataatgagtg 2082439 Query: 1773 cacaaaaactgtttgctgatgctgaaacagttgttgatgctgctcttgatcagactggga 1832 | |||| || ||||| || ||||| | |||| |||| || || ||||||||||| | Sbjct: 2082440 cccaaagacggtttgaagacgctgagtccattgtaaatgccgcgctagatcagactggaa 2082499 Query: 1833 aatggaatcaaggagatttgttgcgaaccaaagctagaattcaggccgcacaagggcaat 1892 ||||| |||||||||||| |||| || ||||| | ||| ||||| ||||| || ||| Sbjct: 2082500 aatggtttcaaggagatttattgcaaattaaagccaaaatgcaggctgcacagggtaaat 2082559 Query: 1893 tgagggatgcggttgggacatatacccaacttcttgctttaattcaacttagaacaaaaa 1952 | | | | || |||| ||||||||||| ||||||||| | || || || || ||||||| Sbjct: 2082560 ttaagaaagcagttgaaacatatacccagcttcttgctgtcatccagctaaggacaaaaa 2082619 Query: 1953 gttt 1956 |||| Sbjct: 2082620 gttt 2082623 Score = 54.0 bits (27), Expect = 0.003 Identities = 114/143 (79%) Strand = Plus / Plus Query: 1991 gatgataaaagcctggaaacagtgacctggtatgatctagctctcttgtacctaggcatg 2050 ||||||| ||| ||||||| || ||| ||||||||||| | || |||| || | ||| Sbjct: 2082942 gatgatagaagtctggaaatagagacgtggtatgatctggtccttctgtatataagaatg 2083001 Query: 2051 tcacagtggagggatgcagaagtttgtgtatcaaagataagagctactagttgttattct 2110 ||||||||||||||||||||| ||| ||||||| |||| ||||| || || ||| Sbjct: 2083002 tcacagtggagggatgcagaactttccatatcaaaaataaaagctatcagcccatactct 2083061 Query: 2111 gccttggcttggcatgctacagg 2133 |||||||||| ||||||||||| Sbjct: 2083062 gccttggcttttcatgctacagg 2083084 Score = 52.0 bits (26), Expect = 0.011 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1506 ttttgcttggtgtttccctttctaatcaagctagatatgcta 1547 |||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 2082173 ttttgcttggcatttccctttccaatcaagctagatttgcta 2082214
>dbj|AK069986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039B08, full insert sequence Length = 2722 Score = 256 bits (129), Expect = 4e-64 Identities = 386/469 (82%), Gaps = 2/469 (0%) Strand = Plus / Plus Query: 940 atacaggaggtctcttctcaataactggaatcttgatggagagaccatagctaaaataca 999 |||||||||| ||||| | ||||||||||||||||| | |||| || | || ||||| Sbjct: 987 atacaggagggctctttggagtaactggaatcttgatgaaaagacaattggtaggataca 1046 Query: 1000 aaaggaatttgctgtttttcttctgtacagtggctgcgaagcccgctctccaaatctcca 1059 |||||||||||| ||| |||| || || |||||||| ||| | ||||||| ||||| | Sbjct: 1047 aaaggaatttgcggttcttctcctatatagtggctgtgaaacttgctctccgaatcttct 1106 Query: 1060 ttctcagttggatggttcatttgtaccacgcaacaatatggaagaggctacactcctttt 1119 |||||||||||||| ||||||||||| || |||||| ||||||| || | || ||||| Sbjct: 1107 atctcagttggatggctcatttgtacctcggaacaatttggaagaagccattcttctttt 1166 Query: 1120 aatgattctattgaggaagtttaatctgaggagggttgagcgggatcccactgtgatgca 1179 |||| |||||||||||||||| ||||| | |||| | ||| |||| || || |||||||| Sbjct: 1167 aatgcttctattgaggaagttcaatcttaagaggctcgagagggacccaaccgtgatgca 1226 Query: 1180 tcaccttacctttgcactgtccatgtcagggcagctaaaaccactggctatacaatttga 1239 ||| || || |||||| ||||||||||||||||| |||||||||| ||||| || ||||| Sbjct: 1227 tcatctgacatttgcattgtccatgtcagggcagttaaaaccactagctattcagtttga 1286 Query: 1240 agaactgttacctggtctgctagacaaaagagaatggtcatacaatgttgcattgtgtta 1299 |||| | |||||||| | || |||| ||||| ||||| ||||||||||| ||||| || Sbjct: 1287 agaattattacctggagtattacacaacagagagtggtcgtacaatgttgctttgtgcta 1346 Query: 1300 cctagccgaaaaagatgattctact-gccctgaatctactcaaaaggatactgaagtttg 1358 |||||| ||| ||||||| |||| | ||||||||||| |||||||||||| || || || Sbjct: 1347 cctagcagaagaagatga-tctaatcgccctgaatctgctcaaaaggatattggtgtctg 1405 Query: 1359 gacaggattctgacagtctcaaagaacttctcctagcttcaaaagtttg 1407 || | ||||| | | |||||||||||||||||||| ||| ||| |||| Sbjct: 1406 gagaagattccaataatctcaaagaacttctcctagtttccaaaatttg 1454 Score = 111 bits (56), Expect = 1e-20 Identities = 176/216 (81%) Strand = Plus / Plus Query: 2209 acatgttccaagtttgatatcgactgctactattctacgacaacttggggagacgccatt 2268 |||||| |||||||||||||| || |||| | |||| |||| ||||| |||| || || Sbjct: 2259 acatgtaccaagtttgatatcaacagctattgttcttcgacggcttggcgagagaccctt 2318 Query: 2269 gccttttgtaaggtgcttcctgactgatgcactgcaacttgatagaacaaaccacatggc 2328 |||| ||||||||| ||||| ||||||||| ||||| | || |||||||| || || || Sbjct: 2319 gcctgctgtaaggtgtttcctaactgatgcattgcaattagacagaacaaatcatattgc 2378 Query: 2329 atggtttaatcttggcctactctacaaagaggaaggtggcaggtcagcagctgaggctgc 2388 ||||| || |||||| |||| ||| |||| ||||| ||||| |||||| ||| ||||| Sbjct: 2379 gtggttgaaccttggcttactatacgaagatgaagggggcagttcagcacttgaagctgc 2438 Query: 2389 tgaatgtttccaagctgctgcacttcttgaggaaac 2424 ||||||||| || ||||||| |||||||| ||||| Sbjct: 2439 tgaatgttttcagactgctgctcttcttgaagaaac 2474 Score = 63.9 bits (32), Expect = 3e-06 Identities = 143/180 (79%) Strand = Plus / Plus Query: 1991 gatgataaaagcctggaaacagtgacctggtatgatctagctctcttgtacctaggcatg 2050 ||||||| ||| ||||||| || ||| ||||||||||| | || |||| || | ||| Sbjct: 2041 gatgatagaagtctggaaatagagacgtggtatgatctggtccttctgtatataagaatg 2100 Query: 2051 tcacagtggagggatgcagaagtttgtgtatcaaagataagagctactagttgttattct 2110 ||||||||||||||||||||| ||| ||||||| |||| ||||| || || ||| Sbjct: 2101 tcacagtggagggatgcagaactttccatatcaaaaataaaagctatcagcccatactct 2160 Query: 2111 gccttggcttggcatgctacaggaaaactatgtgaagcgaaagatcttccaaaagaagct 2170 |||||||||| |||||||||||||| ||| |||||| |||| | ||| ||| |||||| Sbjct: 2161 gccttggcttttcatgctacaggaaagctacatgaagcaaaaggttttctaaaggaagct 2220 Score = 56.0 bits (28), Expect = 7e-04 Identities = 190/244 (77%) Strand = Plus / Plus Query: 1713 tgaagttagaggctggatcagagttgaggagttggcttcttttagctcgaatactaagtg 1772 |||| ||||||||||||||||| | | || |||||| ||| | ||||||||| | |||| Sbjct: 1763 tgaaattagaggctggatcagaactcaagacttggctccttatggctcgaataatgagtg 1822 Query: 1773 cacaaaaactgtttgctgatgctgaaacagttgttgatgctgctcttgatcagactggga 1832 | |||| || ||||| || ||||| | |||| |||| || || ||||||||||| | Sbjct: 1823 cccaaagacggtttgaagacgctgagtccattgtaaatgccgcgctagatcagactggaa 1882 Query: 1833 aatggaatcaaggagatttgttgcgaaccaaagctagaattcaggccgcacaagggcaat 1892 ||||| |||||||||||| |||| || ||||| | ||| ||||| ||||| || ||| Sbjct: 1883 aatggtttcaaggagatttattgcaaattaaagccaaaatgcaggctgcacagggtaaat 1942 Query: 1893 tgagggatgcggttgggacatatacccaacttcttgctttaattcaacttagaacaaaaa 1952 | | | | || |||| ||||||||||| ||||||||| | || || || || ||||||| Sbjct: 1943 ttaagaaagcagttgaaacatatacccagcttcttgctgtcatccagctaaggacaaaaa 2002 Query: 1953 gttt 1956 |||| Sbjct: 2003 gttt 2006 Score = 52.0 bits (26), Expect = 0.011 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1506 ttttgcttggtgtttccctttctaatcaagctagatatgcta 1547 |||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 1556 ttttgcttggcatttccctttccaatcaagctagatttgcta 1597
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 172 bits (87), Expect = 4e-39 Identities = 221/263 (84%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 1710 tggtgaagttagaggctggatcagagttgaggagttggcttcttttagctcgaatactaa 1769 ||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 22798867 tggtgaaattagaggctggataggaattgaggagttggcttcttttagctcgaatactat 22798926 Query: 1770 gtgcacaaaaactgtttgctgatgctgaaacagttgttgatgctgctcttgatcagactg 1829 ||| || | || ||||||||||||| |||| || ||||||| ||||| |||||||||| Sbjct: 22798927 ctgctcagacacagtttgctgatgctaaaaccattattgatgcggctctcgatcagactg 22798986 Query: 1830 ggaaatggaatcaaggagatttgttgcgaaccaaagctagaattc-aggccgcacaaggg 1888 ||||||||| |||||||||||| |||||||||||| | |||| || |||| ||||| || Sbjct: 22798987 ggaaatggagtcaaggagatttattgcgaaccaaacccagaactcaaggctgcacagggc 22799046 Query: 1889 caattgaggga-tgcggttgggacatatacccaacttcttgctttaattcaacttagaac 1947 || | ||||| ||| || | |||||| ||| ||||||| ||| | |||||||| ||||| Sbjct: 22799047 taactcagggactgctgtcgagacatacaccaaacttctcgctgtcattcaactcagaac 22799106 Query: 1948 aaaaagttttggagctgggatct 1970 |||||| | || |||||||||| Sbjct: 22799107 caaaagtctcggtgctgggatct 22799129 Score = 50.1 bits (25), Expect = 0.042 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1547 atatccgatactgagcgagcttcttggcagtgtgaag 1583 ||||| ||||| ||| ||||||||||||||||||||| Sbjct: 22798742 atatctgatacagagagagcttcttggcagtgtgaag 22798778
>emb|AL928745.3|CNS08CBI Oryza sativa chromosome 12, . BAC OSJNBb0092G12 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131603 Score = 172 bits (87), Expect = 4e-39 Identities = 221/263 (84%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 1710 tggtgaagttagaggctggatcagagttgaggagttggcttcttttagctcgaatactaa 1769 ||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 110717 tggtgaaattagaggctggataggaattgaggagttggcttcttttagctcgaatactat 110776 Query: 1770 gtgcacaaaaactgtttgctgatgctgaaacagttgttgatgctgctcttgatcagactg 1829 ||| || | || ||||||||||||| |||| || ||||||| ||||| |||||||||| Sbjct: 110777 ctgctcagacacagtttgctgatgctaaaaccattattgatgcggctctcgatcagactg 110836 Query: 1830 ggaaatggaatcaaggagatttgttgcgaaccaaagctagaattc-aggccgcacaaggg 1888 ||||||||| |||||||||||| |||||||||||| | |||| || |||| ||||| || Sbjct: 110837 ggaaatggagtcaaggagatttattgcgaaccaaacccagaactcaaggctgcacagggc 110896 Query: 1889 caattgaggga-tgcggttgggacatatacccaacttcttgctttaattcaacttagaac 1947 || | ||||| ||| || | |||||| ||| ||||||| ||| | |||||||| ||||| Sbjct: 110897 taactcagggactgctgtcgagacatacaccaaacttctcgctgtcattcaactcagaac 110956 Query: 1948 aaaaagttttggagctgggatct 1970 |||||| | || |||||||||| Sbjct: 110957 caaaagtctcggtgctgggatct 110979 Score = 50.1 bits (25), Expect = 0.042 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1547 atatccgatactgagcgagcttcttggcagtgtgaag 1583 ||||| ||||| ||| ||||||||||||||||||||| Sbjct: 110592 atatctgatacagagagagcttcttggcagtgtgaag 110628
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 73.8 bits (37), Expect = 3e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 1524 tttctaatcaagctagatatgctatatccgatactgagcgagcttcttggcagtgtgaag 1583 |||||||||||||||||| ||| | ||| ||||| ||| ||||||||||||||||||||| Sbjct: 9269079 tttctaatcaagctagatgtgccacatctgatacagagagagcttcttggcagtgtgaag 9269138 Query: 1584 c 1584 | Sbjct: 9269139 c 9269139
>dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011J03 Length = 176461 Score = 73.8 bits (37), Expect = 3e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 1524 tttctaatcaagctagatatgctatatccgatactgagcgagcttcttggcagtgtgaag 1583 |||||||||||||||||| ||| | ||| ||||| ||| ||||||||||||||||||||| Sbjct: 29333 tttctaatcaagctagatgtgccacatctgatacagagagagcttcttggcagtgtgaag 29392 Query: 1584 c 1584 | Sbjct: 29393 c 29393
>dbj|AP005631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0049K19 Length = 131932 Score = 73.8 bits (37), Expect = 3e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 1524 tttctaatcaagctagatatgctatatccgatactgagcgagcttcttggcagtgtgaag 1583 |||||||||||||||||| ||| | ||| ||||| ||| ||||||||||||||||||||| Sbjct: 128797 tttctaatcaagctagatgtgccacatctgatacagagagagcttcttggcagtgtgaag 128856 Query: 1584 c 1584 | Sbjct: 128857 c 128857
>gb|AC144481.6| Medicago truncatula clone mth2-35e10, complete sequence Length = 127189 Score = 56.0 bits (28), Expect = 7e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 994 aatacaaaaggaatttgctgtttttcttctgtacagtggctgcgaagc 1041 ||||||||||||||||||| | |||||| ||||||| |||| |||||| Sbjct: 125501 aatacaaaaggaatttgctttgtttcttttgtacagcggctacgaagc 125548 Score = 46.1 bits (23), Expect = 0.65 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1806 ttgatgctgctcttgatcagactgggaaatggaatcaaggagatttgttgcgaaccaaag 1865 ||||||||||| | ||||| | || |||||| |||||||||| |||||| |||| |||| Sbjct: 126307 ttgatgctgctttagatcaaagcggaaaatgggatcaaggagaattgttgagaactaaag 126366 Query: 1866 cta 1868 ||| Sbjct: 126367 cta 126369
>gb|AC098682.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0004A10, from chromosome 10, complete sequence Length = 144271 Score = 54.0 bits (27), Expect = 0.003 Identities = 45/51 (88%) Strand = Plus / Minus Query: 1991 gatgataaaagcctggaaacagtgacctggtatgatctagctctcttgtac 2041 |||||||||| ||||||| || ||| ||||||||| |||||||||||||| Sbjct: 36709 gatgataaaatcctggaatgagagacatggtatgatttagctctcttgtac 36659 Score = 48.1 bits (24), Expect = 0.16 Identities = 63/76 (82%) Strand = Plus / Minus Query: 2332 gtttaatcttggcctactctacaaagaggaaggtggcaggtcagcagctgaggctgctga 2391 |||||||||||| | ||||||||||||| ||||| || |||||| || | |||||| Sbjct: 36295 gtttaatcttggggtgctctacaaagaggtaggtgatcagtgagcagcagaagttgctga 36236 Query: 2392 atgtttccaagctgct 2407 ||||||||| |||||| Sbjct: 36235 atgtttccaggctgct 36220
>gb|AC074354.8|AC074354 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0065C16, from Chromosome 10, complete sequence Length = 146391 Score = 54.0 bits (27), Expect = 0.003 Identities = 45/51 (88%) Strand = Plus / Minus Query: 1991 gatgataaaagcctggaaacagtgacctggtatgatctagctctcttgtac 2041 |||||||||| ||||||| || ||| ||||||||| |||||||||||||| Sbjct: 126253 gatgataaaatcctggaatgagagacatggtatgatttagctctcttgtac 126203 Score = 48.1 bits (24), Expect = 0.16 Identities = 63/76 (82%) Strand = Plus / Minus Query: 2332 gtttaatcttggcctactctacaaagaggaaggtggcaggtcagcagctgaggctgctga 2391 |||||||||||| | ||||||||||||| ||||| || |||||| || | |||||| Sbjct: 125839 gtttaatcttggggtgctctacaaagaggtaggtgatcagtgagcagcagaagttgctga 125780 Query: 2392 atgtttccaagctgct 2407 ||||||||| |||||| Sbjct: 125779 atgtttccaggctgct 125764
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 52.0 bits (26), Expect = 0.011 Identities = 29/30 (96%) Strand = Plus / Minus Query: 2011 agtgacctggtatgatctagctctcttgta 2040 ||||||||| |||||||||||||||||||| Sbjct: 3311693 agtgacctgatatgatctagctctcttgta 3311664
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 52.0 bits (26), Expect = 0.011 Identities = 29/30 (96%) Strand = Plus / Minus Query: 2011 agtgacctggtatgatctagctctcttgta 2040 ||||||||| |||||||||||||||||||| Sbjct: 121386 agtgacctgatatgatctagctctcttgta 121357
>gb|AE017335.3| Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, complete sequence Length = 94830 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1108 tacactccttttaatgattctatt 1131 |||||||||||||||||||||||| Sbjct: 78066 tacactccttttaatgattctatt 78043
>gb|AF188935.1| Bacillus anthracis plasmid pXO2, complete sequence Length = 96231 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1108 tacactccttttaatgattctatt 1131 |||||||||||||||||||||||| Sbjct: 78540 tacactccttttaatgattctatt 78517
>gb|AE011191.1| Bacillus anthracis str. A2012 plasmid pXO2, complete sequence Length = 94829 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1108 tacactccttttaatgattctatt 1131 |||||||||||||||||||||||| Sbjct: 78065 tacactccttttaatgattctatt 78042
>gb|AC114815.5| Homo sapiens BAC clone RP11-1369K4 from 4, complete sequence Length = 125402 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1867 tagaattcaggccgcacaagggca 1890 |||||||||||||||||||||||| Sbjct: 60530 tagaattcaggccgcacaagggca 60553
>gb|AY105071.1| Zea mays PCO089702 mRNA sequence Length = 623 Score = 46.1 bits (23), Expect = 0.65 Identities = 23/23 (100%) Strand = Plus / Plus Query: 731 aaagcaagagcacttcatgatct 753 ||||||||||||||||||||||| Sbjct: 4 aaagcaagagcacttcatgatct 26
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1047 ctccaaatctccattctcagtt 1068 |||||||||||||||||||||| Sbjct: 536797 ctccaaatctccattctcagtt 536818
>ref|XM_566581.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNA02010) partial mRNA Length = 2037 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1047 ctccaaatctccattctcagtt 1068 |||||||||||||||||||||| Sbjct: 1303 ctccaaatctccattctcagtt 1324
>gb|AC115990.5| Homo sapiens chromosome 11, clone CTC-830E23, complete sequence Length = 160860 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2483 cagtatattctttcaaatttgt 2504 |||||||||||||||||||||| Sbjct: 31960 cagtatattctttcaaatttgt 31939
>gb|AC080183.7| Homo sapiens chromosome , clone RP11-1O24, complete sequence Length = 164647 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2483 cagtatattctttcaaatttgt 2504 |||||||||||||||||||||| Sbjct: 128448 cagtatattctttcaaatttgt 128427
>gb|AC023869.5|AC023869 Homo sapiens chromosome 11, clone RP11-436B24, complete sequence Length = 181765 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2483 cagtatattctttcaaatttgt 2504 |||||||||||||||||||||| Sbjct: 16167 cagtatattctttcaaatttgt 16188
>gb|AC007343.7| Homo sapiens chromosome 16 clone RP11-463J22, complete sequence Length = 186732 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1827 ctgggaaatggaatcaaggaga 1848 |||||||||||||||||||||| Sbjct: 122022 ctgggaaatggaatcaaggaga 122043
>dbj|AP000741.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-63O14, complete sequence Length = 156136 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 795 tggatattgtggaagcagcagt 816 |||||||||||||||||||||| Sbjct: 19353 tggatattgtggaagcagcagt 19374 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 507,359,669 Number of extensions: 27547489 Number of successful extensions: 138652 Number of sequences better than 10.0: 31 Number of HSP's gapped: 138627 Number of HSP's successfully gapped: 82 Length of query: 2654 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2631 Effective length of database: 18,503,978,556 Effective search space: 48683967580836 Effective search space used: 48683967580836 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
