ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf89n22 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os04g17850:12004.t01532:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6278 Score = 97.7 bits (207), Expect(8) = 4e-88 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 4863 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 5042 Score = 84.0 bits (177), Expect(8) = 4e-88 Identities = 33/58 (56%), Positives = 46/58 (79%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 4545 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVP 4718 Score = 74.8 bits (157), Expect(8) = 4e-88 Identities = 37/104 (35%), Positives = 61/104 (58%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T MK +++ RF+P+ + L + Q +GN+SV +Y + +RC L EN+D Sbjct: 3025 QTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVENDDAG 3204 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN IQD L ++ SI++ LA K ER V+ R+ + Sbjct: 3205 MARFMGGLNREIQDILAYKEYNSINRLFHLACKAEREVQGRRAS 3336 Score = 72.1 bits (151), Expect(8) = 4e-88 Identities = 29/50 (58%), Positives = 36/50 (72%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL KKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 4722 LLVRKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKID 4871 Score = 64.3 bits (134), Expect(8) = 4e-88 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 4041 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 4193 Score = 41.8 bits (85), Expect(8) = 4e-88 Identities = 15/46 (32%), Positives = 28/46 (60%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQTHDIQIPTLLDG 1624 +KC + + C+++ID +C NL S +L+ +L I+ PT+ +G Sbjct: 3841 TKCVIKERSCRVIIDGGSCNNLASAELLRNLH*AHSHIRSPTIFNG 3978 Score = 29.5 bits (58), Expect(8) = 4e-88 Identities = 15/54 (27%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L +D F +FPE+ RV + + W Sbjct: 2824 KIKFTIPCFDGKYDPDAYLTWELAIDQKFACHDFPENKRVRAATSEFTDFASIW 2985 Score = 27.2 bits (53), Expect(8) = 4e-88 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +3 / +2 Query: 189 CCFKWYQSPVDPYKFFLSPL 248 CC KWYQS + F++ L Sbjct: 1217 CCIKWYQSSSCSVRDFITSL 1276 Score = 59.3 bits (123), Expect(2) = 1e-14 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + KAVFHSS +RI Sbjct: 5026 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKAVFHSSPNFMRI 4892 Score = 41.8 bits (85), Expect(2) = 1e-14 Identities = 22/48 (45%), Positives = 26/48 (54%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSF 2241 L KS N L+ S+I S GIG YL V+ L L S HM +PSF Sbjct: 4879 LRKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSF 4736 Score = 31.8 bits (63), Expect(2) = 0.30 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 / +2 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R +*+ SHA+W+ CT+Y + ++E Sbjct: 4913 *MENSF*N*IRPI*VVSHALWSH*CTQYFHEINE 5014 Score = 30.9 bits (61), Expect(2) = 0.30 Identities = 12/43 (27%), Positives = 19/43 (44%) Frame = +1 / +3 Query: 1570 EPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E S HP PY I W+ +K+T+ + G ++ S Sbjct: 3924 EKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFATGSYHDS 4052
>LOC_Os05g17830:12005.t01552:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6191 Score = 98.2 bits (208), Expect(8) = 8e-88 Identities = 39/60 (65%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ FHQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN VLR F+ + Sbjct: 2425 KIDLRSGFHQIRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGK 2604 Score = 82.6 bits (174), Expect(8) = 8e-88 Identities = 31/58 (53%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGA+LPN P R +P+E ++++V+ LL KG++RES+SPC VP Sbjct: 2107 LPPLRGIEHQIDLIPGATLPNRPAYRTNPEETKEIQRQVQALLDKGYVRESLSPCAVP 2280 Score = 77.6 bits (163), Expect(8) = 8e-88 Identities = 37/113 (32%), Positives = 65/113 (57%) Frame = +1 / +1 Query: 757 WWHRVQEERMLRGEPRGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEE 936 WW ++ ER G+ R+ +MK ++ RF+P + LF + QN +G+ SV +Y +E Sbjct: 574 WWEQMLNEREEAGQGDVRSWAEMKREMRARFVPKHYRRDLFDKLQNLKQGSLSVDEYYKE 753 Query: 937 FLRLQVRCNLAENEDQQVARYINGLNDAIQDRLMMQQIWSIDQAQALALKTER 1095 + +R N+ E+E+Q +AR+++GL+ IQ + QQ ++ + A K ER Sbjct: 754 MEKAMIRANVYEDEEQSIARFMSGLHRNIQRIVEFQQYRNLIELVHQASKAER 912 Score = 76.7 bits (161), Expect(8) = 8e-88 Identities = 30/50 (60%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + ITVRYR PIPRLD MLD LS + +F+K+D Sbjct: 2284 ILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELSGSMIFSKID 2433 Score = 53.3 bits (110), Expect(8) = 8e-88 Identities = 18/51 (35%), Positives = 29/51 (56%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y + CD+ M H+LL RPWQ+D + H G+ + Y+ W + +I+ P Sbjct: 1606 YIDTMECDVAPMTVCHMLLGRPWQYDRSSLHCGRTNQYTIKWKGKELILKP 1758 Score = 35.0 bits (70), Expect(8) = 8e-88 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +1 / +1 Query: 1237 GKGKANEGPKCYKCGKEGHISSGCP 1311 G + G +C+KCG GH++ CP Sbjct: 1132 GSSTKSSGIQCFKCGGRGHVARECP 1206 Score = 33.6 bits (67), Expect(8) = 8e-88 Identities = 9/31 (29%), Positives = 19/31 (61%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY + W+ ++KI ++ P +G++ Sbjct: 1516 HPHPYHVQWLNNSGSIKIAQRVKVPFKIGEY 1608 Score = 33.1 bits (66), Expect(8) = 8e-88 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQ 1588 ++ V KV K++ID +C NL S+++V L L+ Sbjct: 1405 TRAKVQDKVVKVIIDGGSCHNLASKEMVEKLGLK 1506 Score = 57.4 bits (119), Expect(3) = 2e-19 Identities = 26/48 (54%), Positives = 31/48 (64%) Frame = -3 / -1 Query: 2524 NCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI* 2381 N +T FI + VLGA P G+T HS NP+F+ KAVFHSS I I* Sbjct: 2594 NALKTWFINLMNVLGALVKPKGITNHSYNPNFVLKAVFHSSPIFILI* 2451 Score = 43.7 bits (89), Expect(3) = 2e-19 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L+KS F N + L+ S+I S GIG TV+ L S H+ +PSFFG Sbjct: 2441 LLKSIFENIIDPLNSSSISSSLGIG*R*RTVMLFMALQSTHILHEPSFFG 2292 Score = 33.6 bits (67), Expect(3) = 2e-19 Identities = 12/46 (26%), Positives = 26/46 (56%) Frame = -2 / -3 Query: 2204 TFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILNS 2067 TFSN+ + + L+ L ++ F + W + + SR+++N + N+ Sbjct: 2259 TFSNITFI*KCLYLPLNFLSFFRVGAVCWTVWKCSSRDEINLMFNA 2122 Score = 46.4 bits (95), Expect(2) = 2e-07 Identities = 18/48 (37%), Positives = 31/48 (64%) Frame = -2 / -3 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSS 2370 D++H H+ T CI ++K H+ PF QP L + FPF+ ++LM+++ Sbjct: 2583 DMVH*SHECTRCISQTKRHN*PFIQPKLCFKSSFPFVSNFHSNLMETT 2440 Score = 30.4 bits (60), Expect(2) = 2e-07 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 / -3 Query: 2349 TKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLWRE 2230 T+ I H I NR +I D++ + TH +IFLW + Sbjct: 2406 TQFI*HII*PRNRMTIANSDVIYGSTIYTHPP*TIFLWHQ 2287
>LOC_Os01g30956:12001.t02679:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5387 Score = 97.7 bits (207), Expect(7) = 6e-87 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2500 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 2679 Score = 84.0 bits (177), Expect(7) = 6e-87 Identities = 33/58 (56%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 2182 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVP 2355 Score = 76.2 bits (160), Expect(7) = 6e-87 Identities = 30/50 (60%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2359 LLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKID 2508 Score = 74.8 bits (157), Expect(7) = 6e-87 Identities = 37/104 (35%), Positives = 61/104 (58%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T MK +++ RF+P+ + L + Q +GN+SV +Y + +RC L EN+D Sbjct: 661 QTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVENDDAG 840 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN IQD L ++ SI++ LA K ER V+ R+ + Sbjct: 841 MARFMGGLNREIQDILAYKEYNSINRLFHLACKAEREVQGRRAS 972 Score = 64.3 bits (134), Expect(7) = 6e-87 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 1678 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 1830 Score = 38.6 bits (78), Expect(7) = 6e-87 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 1477 TKCVIKERSCRVIIDGGSCNNLASAEMVEKLALST 1581 Score = 29.5 bits (58), Expect(7) = 6e-87 Identities = 15/54 (27%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L +D F +FPE+ RV + + W Sbjct: 460 KIKFTIPCFDGKYDPDAYLTWELAIDQKFACHDFPENKRVRAATSEFTDFASIW 621 Score = 59.3 bits (123), Expect(2) = 2e-15 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -1 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + KAVFHSS +RI Sbjct: 2663 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKAVFHSSPNFMRI 2529 Score = 44.6 bits (91), Expect(2) = 2e-15 Identities = 23/50 (46%), Positives = 27/50 (54%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM +PSF G Sbjct: 2516 LRKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSFLG 2367 Score = 33.6 bits (67), Expect(2) = 0.044 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 1552 EMVEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 1689 Score = 31.8 bits (63), Expect(2) = 0.044 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 / +3 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R +*+ SHA+W+ CT+Y + ++E Sbjct: 2550 *MENSF*N*IRPI*VVSHALWSH*CTQYFHEINE 2651
>LOC_Os08g02790:12008.t00173:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3659 Score = 97.3 bits (206), Expect(8) = 2e-86 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2415 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 2594 Score = 82.6 bits (174), Expect(8) = 2e-86 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2097 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 2270 Score = 74.4 bits (156), Expect(8) = 2e-86 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2274 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 2423 Score = 66.1 bits (138), Expect(8) = 2e-86 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +3 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 1641 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 1820 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 1821 DDVAKAAKSKCESDKKAQSDGKKPE 1895 Score = 62.0 bits (129), Expect(8) = 2e-86 Identities = 32/104 (30%), Positives = 57/104 (54%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E ED Sbjct: 655 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ LN I D + + ++ + LA K ER V+ R+ + Sbjct: 835 MARFLGRLNREIYDIIDYKDYTNMTRLFHLACKAEREVQGRRAS 966 Score = 40.5 bits (82), Expect(8) = 2e-86 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 1548 Score = 31.8 bits (63), Expect(8) = 2e-86 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPESTRVRAATSEFTDFASVW 615 Score = 25.4 bits (49), Expect(8) = 2e-86 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 1171 QCHRCKGFGHVQRDCPSKR 1227 Score = 62.5 bits (130), Expect(4) = 4e-24 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2578 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 2444 Score = 46.4 bits (95), Expect(4) = 4e-24 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2431 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2282 Score = 39.6 bits (80), Expect(4) = 4e-24 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 / -2 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE L LP C+ S SNC GL R + T SH+T Sbjct: 1783 IFLSWYRKEYWLDLP*CIESLSNCHGLPSRILHACMGTTSHST 1655 Score = 36.3 bits (73), Expect(4) = 4e-24 Identities = 16/57 (28%), Positives = 30/57 (52%) Frame = -2 / -1 Query: 2219 RTWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILNSFYR*QP 2049 RTW +N+P ++Q ++ L + S +R + +QV+ +LN+ +R QP Sbjct: 2264 RTWTKRLANIPFIKQLMNLTLNLLGFLRVGSVWRTVR*GSTWDQVDLMLNAAHRWQP 2094 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2585 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLRFKCCFPFITQLHTNLV 2439 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2411 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2283 Score = 30.9 bits (61), Expect(2) = 0.46 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITK 1656 E+ E S HP+PY I W+ K+TK Sbjct: 1519 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTK 1614 Score = 30.4 bits (60), Expect(2) = 0.46 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 / +2 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT++ + +DE Sbjct: 2396 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NEVWVV*VVSDAFWFN*CTQHFHEVDE 2566 Score = 25.4 bits (49), Expect(2) = 7.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +1 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK + GC++G* C L MH Sbjct: 2464 MNGKQHLKRSLGCMSG**CLLV*LMH 2541 Score = 24.9 bits (48), Expect(2) = 7.9 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +1 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 2284 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 2412
>LOC_Os02g23820:12002.t02070:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7286 Score = 97.3 bits (206), Expect(8) = 2e-86 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 4195 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 4374 Score = 85.8 bits (181), Expect(8) = 2e-86 Identities = 34/61 (55%), Positives = 47/61 (77%) Frame = +3 / +1 Query: 2043 ATRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPV 2222 AT L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC V Sbjct: 3868 ATGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAV 4047 Query: 2223 P 2225 P Sbjct: 4048 P 4050 Score = 74.4 bits (156), Expect(8) = 2e-86 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 4054 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 4203 Score = 66.1 bits (138), Expect(8) = 2e-86 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +2 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 3422 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 3601 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 3602 DDVAKAAKSKCESDKKAQSDGKKPE 3676 Score = 65.2 bits (136), Expect(8) = 2e-86 Identities = 33/104 (31%), Positives = 58/104 (55%) Frame = +1 / +2 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E ED Sbjct: 2435 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAA 2614 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 2615 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 2746 Score = 40.5 bits (82), Expect(8) = 2e-86 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 3224 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 3328 Score = 32.2 bits (64), Expect(8) = 2e-86 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +2 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 2234 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVW 2395 Score = 25.4 bits (49), Expect(8) = 2e-86 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +2 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 2951 QCHRCKGFGHVQRDCPSKR 3007 Score = 62.5 bits (130), Expect(3) = 3e-19 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -1 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 4358 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 4224 Score = 46.4 bits (95), Expect(3) = 3e-19 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 4211 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 4062 Score = 39.6 bits (80), Expect(3) = 3e-19 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 / -3 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE L LP C+ S SNC GL R + T SH+T Sbjct: 3564 IFLSWYRKEYWLDLP*CIESLSNCHGLPSRILHACMGTTSHST 3436 Score = 46.4 bits (95), Expect(3) = 2e-08 Identities = 27/92 (29%), Positives = 41/92 (44%) Frame = +1 / +1 Query: 817 QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQVAR 996 + +K + ++P ILF + Q + R+V Y +RC L E E+ + R Sbjct: 319 KDLKRYFRDVYVPMYYADILFNKLQCLKQDTRTVTSYYHNMQACLLRCGLDECEEAKELR 498 Query: 997 YINGLNDAIQDRLMMQQIWSIDQAQALALKTE 1092 ++ GLN IQD L Q+ S LA E Sbjct: 499 FLCGLNKEIQDMLDCQRYTSRSHLLQLACNAE 594 Score = 33.6 bits (67), Expect(3) = 2e-08 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +2 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 3299 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYH 3430 Score = 30.4 bits (60), Expect(3) = 2e-08 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT++ + +DE Sbjct: 4176 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NEVWVV*VVSDAFWFN*CTQHFHEVDE 4346 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -3 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 4365 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLRFKCCFPFITQLHTNLV 4219 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -3 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 4191 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 4063 Score = 25.4 bits (49), Expect(2) = 7.4 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +2 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK + GC++G* C L MH Sbjct: 4244 MNGKQHLKRSLGCMSG**CLLV*LMH 4321 Score = 24.9 bits (48), Expect(2) = 7.4 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 4064 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 4192
>LOC_Os01g32010:12001.t02781:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5873 Score = 93.6 bits (198), Expect(7) = 3e-86 Identities = 37/60 (61%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +H IR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2500 KIDLRSGYH*IRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 2679 Score = 84.0 bits (177), Expect(7) = 3e-86 Identities = 33/58 (56%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 2182 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVP 2355 Score = 77.1 bits (162), Expect(7) = 3e-86 Identities = 38/104 (36%), Positives = 62/104 (59%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T* MK +++ RF+P+ + L + Q +GN+SV +Y + +RC L EN+D Sbjct: 661 QT*DAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVENDDAG 840 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN IQD L ++ SI++ LA K ER V+ R+ + Sbjct: 841 MARFMGGLNREIQDILAYKEYNSINRLFHLACKAEREVQGRRAS 972 Score = 76.2 bits (160), Expect(7) = 3e-86 Identities = 30/50 (60%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2359 LLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKID 2508 Score = 64.3 bits (134), Expect(7) = 3e-86 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 1678 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 1830 Score = 38.6 bits (78), Expect(7) = 3e-86 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 1477 TKCVIKERSCRVIIDGGSCNNLASAEMVEKLALST 1581 Score = 29.5 bits (58), Expect(7) = 3e-86 Identities = 15/54 (27%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L +D F +FPE+ RV + + W Sbjct: 460 KIKFTIPCFDGKYDPDAYLTWELAIDQKFACHDFPENKRVRAATSEFTDFASIW 621 Score = 59.7 bits (124), Expect(2) = 2e-15 Identities = 26/46 (56%), Positives = 31/46 (67%) Frame = -3 / -1 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI* 2381 R+T FI +KVLGA P GMT HS P+ + KAVFHSS +RI* Sbjct: 2663 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKAVFHSSPNFMRI* 2526 Score = 44.6 bits (91), Expect(2) = 2e-15 Identities = 23/50 (46%), Positives = 27/50 (54%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM +PSF G Sbjct: 2516 LRKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSFLG 2367 Score = 33.6 bits (67), Expect(2) = 0.21 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 1552 EMVEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 1689 Score = 29.5 bits (58), Expect(2) = 0.21 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +2 / +3 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R +*+ SHA+W+ CT Y + ++E Sbjct: 2550 *MENSF*N*IRPI*VVSHALWSH*CT*YFHEINE 2651
>LOC_Os08g22340:12008.t02013:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5508 Score = 96.8 bits (205), Expect(8) = 4e-86 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2416 KVDLRSGYHQIRMK*GDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 2595 Score = 82.6 bits (174), Expect(8) = 4e-86 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2098 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 2271 Score = 74.4 bits (156), Expect(8) = 4e-86 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2275 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 2424 Score = 66.1 bits (138), Expect(8) = 4e-86 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 1642 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 1821 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 1822 DDVAKAAKSKCESDKKAQSDGKKPE 1896 Score = 65.2 bits (136), Expect(8) = 4e-86 Identities = 33/104 (31%), Positives = 58/104 (55%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E ED Sbjct: 655 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 966 Score = 40.9 bits (83), Expect(8) = 4e-86 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C+NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCKNLASSEMVEKLALST 1548 Score = 31.8 bits (63), Expect(8) = 4e-86 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPESTRVRAATSEFTDFASVW 615 Score = 25.4 bits (49), Expect(8) = 4e-86 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 1171 QCHRCKGFGHVQRDCPSKR 1227 Score = 61.1 bits (127), Expect(3) = 4e-19 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2579 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPYFIRI 2445 Score = 46.4 bits (95), Expect(3) = 4e-19 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2432 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2283 Score = 39.6 bits (80), Expect(3) = 4e-19 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 / -2 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE L LP C+ S SNC GL R + T SH+T Sbjct: 1784 IFLSWYRKEYWLDLP*CIESLSNCHGLPSRILHACMGTTSHST 1656 Score = 39.6 bits (80), Expect(2) = 6e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2586 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLRFKCCFPFITLLHTNLV 2440 Score = 39.1 bits (79), Expect(2) = 6e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2412 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2284 Score = 33.6 bits (67), Expect(2) = 0.11 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYH 1650 Score = 30.4 bits (60), Expect(2) = 0.11 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT++ + +DE Sbjct: 2397 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NEVWVV*VVSDAFWFN*CTQHFHEVDE 2567 Score = 25.4 bits (49), Expect(2) = 7.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +2 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK + GC++G* C L MH Sbjct: 2465 MNGKQHLKRSLGCMSG**CLLV*LMH 2542 Score = 24.9 bits (48), Expect(2) = 7.6 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 2285 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 2413
>LOC_Os08g22004:12008.t01989:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9908 Score = 97.7 bits (207), Expect(8) = 7e-86 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 7557 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 7736 Score = 84.0 bits (177), Expect(8) = 7e-86 Identities = 33/58 (56%), Positives = 46/58 (79%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 7239 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVP 7412 Score = 76.2 bits (160), Expect(8) = 7e-86 Identities = 30/50 (60%), Positives = 37/50 (74%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 7416 LLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKID 7565 Score = 74.4 bits (156), Expect(8) = 7e-86 Identities = 37/104 (35%), Positives = 60/104 (57%) Frame = +1 / +3 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T MK +++ RF+P+ + L + Q +GN+SV +Y + +RC L EN+D Sbjct: 5718 QTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVENDDAG 5897 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN IQD L ++ SI+ LA K ER V+ R+ + Sbjct: 5898 MARFMGGLNREIQDILTYKEYNSINHLFHLACKAEREVQGRRAS 6029 Score = 64.3 bits (134), Expect(8) = 7e-86 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 6735 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 6887 Score = 38.6 bits (78), Expect(8) = 7e-86 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +3 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 6534 TKCVIKERSCRVIIDGGSCNNLASAEMVEKLALST 6638 Score = 27.2 bits (53), Expect(8) = 7e-86 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +3 / +2 Query: 189 CCFKWYQSPVDPYKFFLSPL 248 CC KWYQS + F++ L Sbjct: 3908 CCIKWYQSSSCSVRDFITSL 3967 Score = 25.8 bits (50), Expect(8) = 7e-86 Identities = 14/54 (25%), Positives = 21/54 (38%) Frame = +1 / +3 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L +D F +FPE+ V + + W Sbjct: 5517 KIKFTIPCFDGKYDPDAYLTWELAIDQKFACHDFPENKCVRAATSEFTDFASIW 5678 Score = 59.3 bits (123), Expect(2) = 2e-15 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + KAVFHSS +RI Sbjct: 7720 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKAVFHSSPNFMRI 7586 Score = 44.6 bits (91), Expect(2) = 2e-15 Identities = 23/50 (46%), Positives = 27/50 (54%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM +PSF G Sbjct: 7573 LRKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSFLG 7424 Score = 33.6 bits (67), Expect(2) = 0.076 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 / +3 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 6609 EMVEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 6746 Score = 31.8 bits (63), Expect(2) = 0.076 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 / +2 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R +*+ SHA+W+ CT+Y + ++E Sbjct: 7607 *MENSF*N*IRPI*VVSHALWSH*CTQYFHEINE 7708
>LOC_Os04g39730:12004.t03540:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5989 Score = 97.3 bits (206), Expect(8) = 1e-85 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2416 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 2595 Score = 82.6 bits (174), Expect(8) = 1e-85 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2098 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 2271 Score = 74.4 bits (156), Expect(8) = 1e-85 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2275 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 2424 Score = 65.2 bits (136), Expect(8) = 1e-85 Identities = 33/104 (31%), Positives = 58/104 (55%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E ED Sbjct: 655 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 966 Score = 64.8 bits (135), Expect(8) = 1e-85 Identities = 24/85 (28%), Positives = 48/85 (56%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD++ M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 1642 NYHDVVECDVLPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 1821 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 1822 DDVAKAAKSKCESDKKAQSDGKKPE 1896 Score = 40.5 bits (82), Expect(8) = 1e-85 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 1548 Score = 32.2 bits (64), Expect(8) = 1e-85 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVW 615 Score = 25.4 bits (49), Expect(8) = 1e-85 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 1171 QCHRCKGFGHVQRDCPSKR 1227 Score = 62.5 bits (130), Expect(3) = 3e-18 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -3 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2579 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 2445 Score = 46.4 bits (95), Expect(3) = 3e-18 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2432 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2283 Score = 35.4 bits (71), Expect(3) = 3e-18 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -2 / -3 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE LP C+ S SNC GL R + SH+T Sbjct: 1784 IFLSWYRKEYWFDLP*CIESLSNCHGLPSRILQACMGKTSHST 1656 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -2 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2586 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLCFKCCFPFITQLHTNLV 2440 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -2 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2412 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2284 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + K VV*+ S A W CT++ + +DE Sbjct: 2397 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NKVWVV*VVSDAFWFN*CTQHFHEVDE 2567 Score = 31.3 bits (62), Expect(2) = 0.16 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+T + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTNLVHINFAIGNYH 1650 Score = 26.3 bits (51), Expect(2) = 4.2 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 / +2 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK ++ GC++G* C L MH Sbjct: 2465 MNGKQHLKQSLGCMSG**CLLV*LMH 2542 Score = 24.9 bits (48), Expect(2) = 4.2 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 2285 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 2413
>LOC_Os06g25890:12006.t02396:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5508 Score = 97.3 bits (206), Expect(8) = 1e-85 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2416 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 2595 Score = 84.0 bits (177), Expect(8) = 1e-85 Identities = 33/58 (56%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GIQ+ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2098 LPPVRGIQHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 2271 Score = 74.4 bits (156), Expect(8) = 1e-85 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2275 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 2424 Score = 65.7 bits (137), Expect(8) = 1e-85 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 1642 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHYGRSNQYSFLYHDKKIVLHPMSPEDILR 1821 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 1822 DDVAKAAKSKCESDKKAQSDGKKPE 1896 Score = 63.4 bits (132), Expect(8) = 1e-85 Identities = 32/104 (30%), Positives = 58/104 (55%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E ED Sbjct: 655 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K +R V+ R+ + Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAKREVQGRRAS 966 Score = 39.1 bits (79), Expect(8) = 1e-85 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL + ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCNNLANSEMVEKLALST 1548 Score = 32.2 bits (64), Expect(8) = 1e-85 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVW 615 Score = 25.4 bits (49), Expect(8) = 1e-85 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 1171 QCHRCKGFGHVQRDCPSKR 1227 Score = 62.5 bits (130), Expect(3) = 4e-19 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2579 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 2445 Score = 46.4 bits (95), Expect(3) = 4e-19 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2432 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2283 Score = 38.2 bits (77), Expect(3) = 4e-19 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -2 / -2 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE LP C+ S SNC GL R + T SH+T Sbjct: 1784 IFLSWYRKEYWFDLP*CIESLSNCHGLPSRILQACMGTTSHST 1656 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2586 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLCFKCCFPFITQLHTNLV 2440 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2412 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2284 Score = 33.6 bits (67), Expect(2) = 0.033 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYH 1650 Score = 32.2 bits (64), Expect(2) = 0.033 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + K VV*+ S A W CT++ + +DE Sbjct: 2397 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NKVWVV*VVSDAFWFN*CTQHFHEVDE 2567 Score = 26.3 bits (51), Expect(2) = 4.3 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 / +2 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK ++ GC++G* C L MH Sbjct: 2465 MNGKQHLKQSLGCMSG**CLLV*LMH 2542 Score = 24.9 bits (48), Expect(2) = 4.3 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 2285 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 2413
>LOC_Os05g21020:12005.t01863:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5509 Score = 97.3 bits (206), Expect(8) = 1e-85 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2416 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 2595 Score = 82.6 bits (174), Expect(8) = 1e-85 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2098 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 2271 Score = 72.1 bits (151), Expect(8) = 1e-85 Identities = 28/50 (56%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRL+ MLD LS + +F+K+D Sbjct: 2275 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLNDMLDELSGSIVFSKVD 2424 Score = 66.1 bits (138), Expect(8) = 1e-85 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 1642 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 1821 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 1822 DDVAKAAKSKCESDKKAQSDGKKPE 1896 Score = 65.2 bits (136), Expect(8) = 1e-85 Identities = 33/104 (31%), Positives = 58/104 (55%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E ED Sbjct: 655 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 966 Score = 40.5 bits (82), Expect(8) = 1e-85 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 1548 Score = 32.2 bits (64), Expect(8) = 1e-85 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVW 615 Score = 25.4 bits (49), Expect(8) = 1e-85 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 1171 QCHRCKGFGHVQRDCPSKR 1227 Score = 62.5 bits (130), Expect(3) = 1e-18 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -3 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2579 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 2445 Score = 43.7 bits (89), Expect(3) = 1e-18 Identities = 21/50 (42%), Positives = 28/50 (56%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I GIG Y V+ L L S H+ +PSFFG Sbjct: 2432 LRKSTLENTIEPLNSSSISFNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2283 Score = 39.6 bits (80), Expect(3) = 1e-18 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 / -3 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE L LP C+ S SNC GL R + T SH+T Sbjct: 1784 IFLSWYRKEYWLDLP*CIESLSNCHGLPSRILHACMGTTSHST 1656 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -2 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2586 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLRFKCCFPFITQLHTNLV 2440 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -2 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2412 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2284 Score = 30.4 bits (60), Expect(2) = 2.9 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT++ + +DE Sbjct: 2397 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NEVWVV*VVSDAFWFN*CTQHFHEVDE 2567 Score = 28.6 bits (56), Expect(2) = 2.9 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+P I W+ K+TK + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHP*YIQWLNNSGKAKVTKLVHINFAIGNYH 1650 Score = 25.4 bits (49), Expect(2) = 7.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +2 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK + GC++G* C L MH Sbjct: 2465 MNGKQHLKRSLGCMSG**CLLV*LMH 2542 Score = 24.9 bits (48), Expect(2) = 7.6 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 2285 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 2413
>LOC_Os09g05080:12009.t00404:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5509 Score = 97.3 bits (206), Expect(8) = 2e-85 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2416 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 2595 Score = 82.6 bits (174), Expect(8) = 2e-85 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2098 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 2271 Score = 74.4 bits (156), Expect(8) = 2e-85 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2275 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 2424 Score = 66.1 bits (138), Expect(8) = 2e-85 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 1642 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 1821 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 1822 DDVAKAAKSKCESDKKAQSDGKKPE 1896 Score = 62.0 bits (129), Expect(8) = 2e-85 Identities = 32/104 (30%), Positives = 57/104 (54%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q + +SV +Y +E +RCNL E ED Sbjct: 655 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQDAKSVEEYYQELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 966 Score = 40.5 bits (82), Expect(8) = 2e-85 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 1548 Score = 32.2 bits (64), Expect(8) = 2e-85 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVW 615 Score = 25.4 bits (49), Expect(8) = 2e-85 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 1171 QCHRCKGFGHVQRDCPSKR 1227 Score = 62.5 bits (130), Expect(4) = 4e-23 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -3 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2579 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 2445 Score = 46.4 bits (95), Expect(4) = 4e-23 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2432 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2283 Score = 38.2 bits (77), Expect(4) = 4e-23 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -2 / -3 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE LP C+ S SNC GL R + T SH+T Sbjct: 1784 IFLSWYRKEYWFDLP*CIESLSNCHGLPSRILQACMGTTSHST 1656 Score = 35.9 bits (72), Expect(4) = 4e-23 Identities = 17/57 (29%), Positives = 30/57 (52%) Frame = -2 / -2 Query: 2219 RTWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILNSFYR*QP 2049 RTW + +P ++QF++ L + S IR + +QV+ +LN+ +R QP Sbjct: 2265 RTWTKRLAYIPFIKQFMNLTLNLLGFLRVGSVWRTIR*GSTWDQVDLMLNAAHRWQP 2095 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -2 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2586 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLCFKCCFPFITQLHTNLV 2440 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -2 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2412 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2284 Score = 33.6 bits (67), Expect(2) = 0.033 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYH 1650 Score = 32.2 bits (64), Expect(2) = 0.033 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + K VV*+ S A W CT++ + +DE Sbjct: 2397 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NKVWVV*VVSDAFWFN*CTQHFHEVDE 2567 Score = 26.3 bits (51), Expect(2) = 4.3 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 / +2 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK ++ GC++G* C L MH Sbjct: 2465 MNGKQHLKQSLGCMSG**CLLV*LMH 2542 Score = 24.9 bits (48), Expect(2) = 4.3 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 2285 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 2413
>LOC_Os02g27380:12002.t02432:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7837 Score = 97.3 bits (206), Expect(8) = 4e-85 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 4536 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMSLMNEVLRAFIGR 4715 Score = 84.0 bits (177), Expect(8) = 4e-85 Identities = 33/58 (56%), Positives = 46/58 (79%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 4218 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVP 4391 Score = 77.1 bits (162), Expect(8) = 4e-85 Identities = 38/104 (36%), Positives = 62/104 (59%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T* MK +++ RF+P+ + L + Q +GN+SV +Y + +RC L EN+D Sbjct: 2698 QT*DAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVENDDAG 2877 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN IQD L ++ SI++ LA K ER V+ R+ + Sbjct: 2878 MARFMGGLNREIQDILAYKEYNSINRLFHLACKAEREVQGRRAS 3009 Score = 73.9 bits (155), Expect(8) = 4e-85 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + IT+RYR PIP+LD MLD LS + +F+K+D Sbjct: 4395 LLFPKKDGSWRMCVDCRAINNITIRYRHPIPKLDDMLDELSGSLVFSKID 4544 Score = 55.1 bits (114), Expect(8) = 4e-85 Identities = 20/47 (42%), Positives = 29/47 (61%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRI 1830 Y ++ CD+V M +LL RPW FD D+ H GK + YSF+ N + + Sbjct: 3715 YHDSINCDVVPMQACSMLLGRPW*FDKDSLHFGKSNQYSFVHNGKNL 3855 Score = 38.6 bits (78), Expect(8) = 4e-85 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 3514 TKCVIKERSCRVIIDGGSCNNLASAEMVEKLALST 3618 Score = 29.9 bits (59), Expect(8) = 4e-85 Identities = 15/54 (27%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L +D F +FPE+ RV + + W Sbjct: 2497 KIKFTIPCFDGKYDPDAYLTWELAIDQKFACHDFPENKRVSAATSEFTDFASIW 2658 Score = 27.2 bits (53), Expect(8) = 4e-85 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +3 / +2 Query: 189 CCFKWYQSPVDPYKFFLSPL 248 CC KWYQS + F++ L Sbjct: 962 CCIKWYQSSSCSVRDFITSL 1021 Score = 61.6 bits (128), Expect(2) = 5e-16 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -1 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FIK +KVLGA P GMT HS P+ + KAVFHSS +RI Sbjct: 4699 RKTSFIKLMKVLGALVRPKGMTNHSYRPNLVLKAVFHSSPNFMRI 4565 Score = 44.6 bits (91), Expect(2) = 5e-16 Identities = 23/50 (46%), Positives = 27/50 (54%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM +PSF G Sbjct: 4552 LRKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSFLG 4403 Score = 33.6 bits (67), Expect(2) = 0.034 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 3589 EMVEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 3726 Score = 32.7 bits (65), Expect(2) = 0.034 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +2 / +2 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R +*+ SHA+W+ CT+Y + L+E Sbjct: 4586 *MENSF*N*IRPI*VVSHALWSH*CTQYFHELNE 4687
>LOC_Os04g17890:12004.t01536:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7858 Score = 97.7 bits (207), Expect(8) = 4e-85 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 4862 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 5041 Score = 84.5 bits (178), Expect(8) = 4e-85 Identities = 33/66 (50%), Positives = 50/66 (75%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 4544 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVPVL 4723 Query: 2232 HAKERW 2249 ++++ Sbjct: 4724 LVRKKY 4741 Score = 74.8 bits (157), Expect(8) = 4e-85 Identities = 37/101 (36%), Positives = 59/101 (58%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T MK +++ RF+P+ + L + Q +GN+SV +Y + +RC L EN+D Sbjct: 3025 QTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVENDDAG 3204 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTR 1110 +AR++ GLN IQD L ++ SI++ LA K ER RT+ Sbjct: 3205 MARFMGGLNREIQDILAYKEYNSINRLFHLACKAERKYRTK 3327 Score = 68.0 bits (142), Expect(8) = 4e-85 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL KK GS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 4721 LLVRKKYGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKID 4870 Score = 64.3 bits (134), Expect(8) = 4e-85 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +1 / +2 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 4040 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 4192 Score = 38.6 bits (78), Expect(8) = 4e-85 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 3839 TKCVIKERSCRVIIDGGSCNNLASAEMVEKLALST 3943 Score = 28.1 bits (55), Expect(8) = 4e-85 Identities = 14/54 (25%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I + G D + L +D F +FPE+ RV + + W Sbjct: 2824 KIKFTIPCYDGKYDPDAYLTWELAIDQKFACHDFPENKRVRAATSEFTDFASIW 2985 Score = 27.2 bits (53), Expect(8) = 4e-85 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +3 / +2 Query: 189 CCFKWYQSPVDPYKFFLSPL 248 CC KWYQS + F++ L Sbjct: 1217 CCIKWYQSSSCSVRDFITSL 1276 Score = 59.3 bits (123), Expect(2) = 9e-14 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + KAVFHSS +RI Sbjct: 5025 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKAVFHSSPNFMRI 4891 Score = 39.1 bits (79), Expect(2) = 9e-14 Identities = 21/48 (43%), Positives = 25/48 (52%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSF 2241 L KS N L+ S+I S GIG YL V+ L L S HM +P F Sbjct: 4878 LRKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPYF 4735 Score = 32.2 bits (64), Expect(2) = 0.15 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = +1 / +2 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ + G ++ S Sbjct: 3914 EMVEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFATGSYHDS 4051 Score = 31.8 bits (63), Expect(2) = 0.15 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 / +1 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R +*+ SHA+W+ CT+Y + ++E Sbjct: 4912 *MENSF*N*IRPI*VVSHALWSH*CTQYFHEINE 5013
>LOC_Os01g29900:12001.t02672:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5510 Score = 97.3 bits (206), Expect(8) = 4e-85 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2416 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 2595 Score = 82.6 bits (174), Expect(8) = 4e-85 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2098 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 2271 Score = 74.4 bits (156), Expect(8) = 4e-85 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2275 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 2424 Score = 64.8 bits (135), Expect(8) = 4e-85 Identities = 22/52 (42%), Positives = 36/52 (69%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P Sbjct: 1642 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHP 1797 Score = 62.9 bits (131), Expect(8) = 4e-85 Identities = 33/101 (32%), Positives = 55/101 (54%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y E +RCNL E ED Sbjct: 655 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYHELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTR 1110 +AR++ GLN I D + + ++ + LA K ER V+ R Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGR 957 Score = 40.5 bits (82), Expect(8) = 4e-85 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 1548 Score = 31.8 bits (63), Expect(8) = 4e-85 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPESTRVRAATSEFTDFASVW 615 Score = 25.4 bits (49), Expect(8) = 4e-85 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 1171 QCHRCKGFGHVQRDCPSKR 1227 Score = 62.5 bits (130), Expect(3) = 2e-19 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -1 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2579 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 2445 Score = 46.4 bits (95), Expect(3) = 2e-19 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2432 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2283 Score = 39.6 bits (80), Expect(3) = 2e-19 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE L LP C+ S SNC GL R + T SH+T Sbjct: 1784 IFLSWYRKEYWLDLP*CIESLSNCHGLPSRILHACMGTTSHST 1656 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -3 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2586 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLRFKCCFPFITQLHTNLV 2440 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -3 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2412 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2284 Score = 33.6 bits (67), Expect(2) = 0.11 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYH 1650 Score = 30.4 bits (60), Expect(2) = 0.11 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT++ + +DE Sbjct: 2397 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NEVWVV*VVSDAFWFN*CTQHFHEVDE 2567 Score = 25.4 bits (49), Expect(2) = 7.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +2 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK + GC++G* C L MH Sbjct: 2465 MNGKQHLKRSLGCMSG**CLLV*LMH 2542 Score = 24.9 bits (48), Expect(2) = 7.6 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 2285 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 2413
>LOC_Os08g20250:12008.t01843:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5496 Score = 95.0 bits (201), Expect(8) = 6e-85 Identities = 36/60 (60%), Positives = 48/60 (80%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VL F+ + Sbjct: 2417 KVDLRSGYHQIRMKLGDEWKTAFKMKFGLYEWLVMPFGLTNAPSTFMRLMNEVLHPFIGK 2596 Score = 82.2 bits (173), Expect(8) = 6e-85 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2099 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEEIKEIQRQVHELLDKGYVRESLSPCAVP 2272 Score = 74.4 bits (156), Expect(8) = 6e-85 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2276 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 2425 Score = 65.2 bits (136), Expect(8) = 6e-85 Identities = 33/104 (31%), Positives = 58/104 (55%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E ED Sbjct: 655 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 966 Score = 65.2 bits (136), Expect(8) = 6e-85 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 1642 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 1821 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 1822 DDVAKAAKSKCESDKKAPSDGKKPE 1896 Score = 40.5 bits (82), Expect(8) = 6e-85 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 1548 Score = 31.8 bits (63), Expect(8) = 6e-85 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRVRAAMSEFTDFASVW 615 Score = 24.9 bits (48), Expect(8) = 6e-85 Identities = 6/18 (33%), Positives = 11/18 (61%) Frame = +1 / +1 Query: 1267 CYKCGKEGHISSGCPLRK 1320 C++C GH+ CP ++ Sbjct: 1174 CHRCKGFGHVQRDCPSKR 1227 Score = 60.6 bits (126), Expect(3) = 5e-19 Identities = 25/44 (56%), Positives = 30/44 (68%) Frame = -3 / -1 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2577 KTSFINLMKVLGALVKPKGITNHSYNPNFILNAVFHSSPNFIRI 2446 Score = 46.4 bits (95), Expect(3) = 5e-19 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2433 LRKSTLENTMEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2284 Score = 39.6 bits (80), Expect(3) = 5e-19 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 / -2 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE L LP C+ S SNC GL R + T SH+T Sbjct: 1784 IFLSWYRKEYWLDLP*CIESLSNCHGLPSRILHACMGTTSHST 1656 Score = 39.6 bits (80), Expect(2) = 2e-07 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -2 / -3 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E ++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2587 ERMQNLIHQPHESAGCIS*TKRHH*PLIQPKLHFKCCFPFITQLHTNLV 2441 Score = 37.3 bits (75), Expect(2) = 2e-07 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -1 / -3 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IF W Sbjct: 2413 EHNGATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFFW 2285 Score = 30.9 bits (61), Expect(2) = 6.9 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 / +1 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT++ + +DE Sbjct: 2398 WLHCVLQS*FA*WLPPDSYEVG**MENSI*NEVWVV*VVSDAFWFN*CTQHFHEVDE 2568 Score = 26.7 bits (52), Expect(2) = 6.9 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I + K+TK + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHPYYIQ*LNNSGKAKVTKLVHINFAIGNYH 1650
>LOC_Os08g21690:12008.t01959:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6265 Score = 95.9 bits (203), Expect(7) = 1e-84 Identities = 36/53 (67%), Positives = 45/53 (84%) Frame = +3 / +2 Query: 2376 FHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2522 YHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 2680 Score = 84.0 bits (177), Expect(7) = 1e-84 Identities = 33/58 (56%), Positives = 46/58 (79%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 2183 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVP 2356 Score = 76.2 bits (160), Expect(7) = 1e-84 Identities = 30/50 (60%), Positives = 37/50 (74%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2360 LLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKID 2509 Score = 70.3 bits (147), Expect(7) = 1e-84 Identities = 36/104 (34%), Positives = 60/104 (57%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T MK +++ RF+P+ + L + Q +GN+SV +Y + +RC L EN+D Sbjct: 661 QTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQIGMLRCGLVENDDAG 840 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ LN IQD L ++ SI++ LA K ER V+ R+ + Sbjct: 841 MARFMGELNREIQDILAYKEYNSINRLFHLACKAEREVQGRRAS 972 Score = 64.3 bits (134), Expect(7) = 1e-84 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 1678 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 1830 Score = 38.6 bits (78), Expect(7) = 1e-84 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 1477 TKCVIKERSCRVIIDGGSCNNLASAEMVEKLALST 1581 Score = 29.5 bits (58), Expect(7) = 1e-84 Identities = 15/54 (27%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L +D F +FPE+ RV + + W Sbjct: 460 KIKFTIPCFDGKYDPDAYLTWELAIDQKFACHDFPENKRVRAATSEFTDFASIW 621 Score = 59.3 bits (123), Expect(2) = 3e-15 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + KAVFHSS +RI Sbjct: 2664 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKAVFHSSPNFMRI 2530 Score = 44.1 bits (90), Expect(2) = 3e-15 Identities = 23/50 (46%), Positives = 27/50 (54%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM +PSF G Sbjct: 2517 LHKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSFLG 2368 Score = 33.6 bits (67), Expect(2) = 0.050 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 1552 EMVEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 1689 Score = 31.8 bits (63), Expect(2) = 0.050 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 / +1 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R +*+ SHA+W+ CT+Y + ++E Sbjct: 2551 *MENSF*N*IRPI*VVSHALWSH*CTQYFHEINE 2652
>LOC_Os10g20440:12010.t01537:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5719 Score = 95.9 bits (203), Expect(7) = 1e-84 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTF+ LMN+VLR F+ + Sbjct: 2500 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFIRLMNEVLRAFIGR 2679 Score = 83.5 bits (176), Expect(7) = 1e-84 Identities = 32/58 (55%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC +P Sbjct: 2182 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSIP 2355 Score = 76.2 bits (160), Expect(7) = 1e-84 Identities = 30/50 (60%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2359 LLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKID 2508 Score = 74.8 bits (157), Expect(7) = 1e-84 Identities = 37/104 (35%), Positives = 61/104 (58%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T MK +++ RF+P+ + L + Q +GN+SV +Y + +RC L EN+D Sbjct: 661 QTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVENDDAG 840 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN IQD L ++ SI++ LA K ER V+ R+ + Sbjct: 841 MARFMGGLNREIQDILAYKEYNSINRLFHLACKAEREVQGRRAS 972 Score = 63.4 bits (132), Expect(7) = 1e-84 Identities = 21/51 (41%), Positives = 33/51 (64%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M + L RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 1678 YHDSINCDVVPMQACSIFLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 1830 Score = 38.2 bits (77), Expect(7) = 1e-84 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 1477 TKCVIKERSCRVIIDRGSCNNLASAEMVEKLALST 1581 Score = 25.8 bits (50), Expect(7) = 1e-84 Identities = 14/54 (25%), Positives = 21/54 (38%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F D + L +D F +FPE+ RV + + W Sbjct: 460 KIKFTIPCFDEKYDPDAYLTWELAIDQKFACHDFPENKRVRAATSEFTDFASIW 621 Score = 59.3 bits (123), Expect(3) = 5e-20 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -3 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + KAVFHSS +RI Sbjct: 2663 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKAVFHSSPNFMRI 2529 Score = 44.6 bits (91), Expect(3) = 5e-20 Identities = 23/50 (46%), Positives = 27/50 (54%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM +PSF G Sbjct: 2516 LRKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSFLG 2367 Score = 33.1 bits (66), Expect(3) = 5e-20 Identities = 15/52 (28%), Positives = 24/52 (46%) Frame = -2 / -2 Query: 2225 GYRTWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 G RT + +PL++ LH L + W + + RN+VN +LN Sbjct: 2355 GDRTRTKRLTYIPLVE*LLHLTLNLLCFLWVGPIWRTVWQRGPRNEVNLVLN 2200 Score = 33.6 bits (67), Expect(2) = 0.047 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 1552 EMVEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 1689 Score = 31.8 bits (63), Expect(2) = 0.047 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 / +3 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R +*+ SHA+W+ CT+Y + ++E Sbjct: 2550 *MENSF*N*IRPI*VVSHALWSH*CTQYFHKINE 2651
>LOC_Os08g22420:12008.t02021:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4923 Score = 95.5 bits (202), Expect(8) = 1e-84 Identities = 36/60 (60%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQI ++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2416 KVELRSGYHQIHMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 2595 Score = 82.6 bits (174), Expect(8) = 1e-84 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2098 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 2271 Score = 72.5 bits (152), Expect(8) = 1e-84 Identities = 28/50 (56%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K++ Sbjct: 2275 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVE 2424 Score = 66.1 bits (138), Expect(8) = 1e-84 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 1642 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 1821 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 1822 DDVAKAAKSKCESDKKAQSDGKKPE 1896 Score = 62.5 bits (130), Expect(8) = 1e-84 Identities = 33/104 (31%), Positives = 57/104 (54%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y E +RCNL E ED Sbjct: 655 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYY*ELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 966 Score = 40.5 bits (82), Expect(8) = 1e-84 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 1548 Score = 31.8 bits (63), Expect(8) = 1e-84 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPESTRVRAATSEFTDFASVW 615 Score = 25.4 bits (49), Expect(8) = 1e-84 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 1171 QCHRCKGFGHVQRDCPSKR 1227 Score = 58.3 bits (121), Expect(3) = 9e-18 Identities = 24/43 (55%), Positives = 29/43 (67%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS I Sbjct: 2579 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFI 2451 Score = 44.1 bits (90), Expect(3) = 9e-18 Identities = 21/50 (42%), Positives = 28/50 (56%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L S+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2432 LRNSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2283 Score = 39.6 bits (80), Expect(3) = 9e-18 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 / -2 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE L LP C+ S SNC GL R + T SH+T Sbjct: 1784 IFLSWYRKEYWLDLP*CIESLSNCHGLPSRILHACMGTTSHST 1656 Score = 39.1 bits (79), Expect(2) = 1e-07 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2412 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2284 Score = 38.2 bits (77), Expect(2) = 1e-07 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFI 2403 E +++LIHQ H+ CI +K H P QP L + FPFI Sbjct: 2586 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLRFKCCFPFI 2464 Score = 30.4 bits (60), Expect(2) = 1.1 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT++ + +DE Sbjct: 2397 WLYCVLQS*IA*WLPPDSYEVG**MENSI*NEVWVV*VVSDAFWFN*CTQHFHEVDE 2567 Score = 29.9 bits (59), Expect(2) = 1.1 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+ Y I W+ K+TK + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHSYYIQWLNNSGKAKVTKLVHINFAIGNYH 1650 Score = 25.4 bits (49), Expect(2) = 7.7 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +2 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK + GC++G* C L MH Sbjct: 2465 MNGKQHLKRSLGCMSG**CLLV*LMH 2542 Score = 24.9 bits (48), Expect(2) = 7.7 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 2285 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 2413
>LOC_Os04g14830:12004.t01300:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5772 Score = 95.0 bits (201), Expect(7) = 2e-84 Identities = 37/60 (61%), Positives = 48/60 (80%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K L+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2501 KIDLRSGYHQIRMKLGDEWKTAFKTKFSLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 2680 Score = 84.0 bits (177), Expect(7) = 2e-84 Identities = 33/58 (56%), Positives = 46/58 (79%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 2183 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCAVP 2356 Score = 76.2 bits (160), Expect(7) = 2e-84 Identities = 30/50 (60%), Positives = 37/50 (74%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2360 LLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKID 2509 Score = 73.9 bits (155), Expect(7) = 2e-84 Identities = 37/104 (35%), Positives = 61/104 (58%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T MK +++ RF+P+ + L + Q +GN+SV +Y + +RC L EN+D Sbjct: 661 QTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVENDDAG 840 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN IQD L ++ SI++ LA K ER V+ R+ + Sbjct: 841 MARFMGGLNREIQDILAYKEYNSINRLFHLACKAEREVQ*RRAS 972 Score = 64.3 bits (134), Expect(7) = 2e-84 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 1678 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 1830 Score = 34.5 bits (69), Expect(7) = 2e-84 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++I +C NL S ++V L L T Sbjct: 1477 TKCVIKERSCRVIIYGGSCNNLASAEMVEKLALST 1581 Score = 29.5 bits (58), Expect(7) = 2e-84 Identities = 15/54 (27%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L +D F +FPE+ RV + + W Sbjct: 460 KIKFTIPCFDGKYDPDAYLTWELAIDQKFACHDFPENKRVRAATSEFTDFASIW 621 Score = 54.7 bits (113), Expect(2) = 5e-14 Identities = 24/45 (53%), Positives = 29/45 (64%) Frame = -3 / -1 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS + + KAVFHSS +RI Sbjct: 2664 RKTSFINLMKVLGALVRPKGMTNHSYRLNLVLKAVFHSSPNFMRI 2530 Score = 44.6 bits (91), Expect(2) = 5e-14 Identities = 23/50 (46%), Positives = 27/50 (54%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM +PSF G Sbjct: 2517 LRKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSFLG 2368 Score = 31.8 bits (63), Expect(2) = 0.38 Identities = 16/57 (28%), Positives = 31/57 (54%) Frame = +2 / +1 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W + V Q+ + + ++ *MEN + +*+ SHA+W+ CT+Y + ++E Sbjct: 2482 WFTCVLQN*FA*WLPPDSHEVRR*MENSF*N*IQPI*VVSHALWSH*CTQYFHEINE 2652 Score = 30.4 bits (60), Expect(2) = 0.38 Identities = 12/46 (26%), Positives = 21/46 (45%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++ ++ S Sbjct: 1552 EMVEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIDSYHDS 1689
>LOC_Os08g20220:12008.t01840:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10081 Score = 97.3 bits (206), Expect(8) = 2e-84 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 6992 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 7171 Score = 82.6 bits (174), Expect(8) = 2e-84 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 6674 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 6847 Score = 74.4 bits (156), Expect(8) = 2e-84 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 6851 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 7000 Score = 65.2 bits (136), Expect(8) = 2e-84 Identities = 32/104 (30%), Positives = 58/104 (55%) Frame = +1 / +2 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G ++V +Y +E +RCNL E ED Sbjct: 5234 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGTKNVEEYYQELQMGLLRCNLEETEDAA 5413 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 5414 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQRRRAS 5545 Score = 64.8 bits (135), Expect(8) = 2e-84 Identities = 24/85 (28%), Positives = 48/85 (56%) Frame = +1 / +2 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPW+FD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 6218 NYHDVVKCDVVPMQACNILLGRPWKFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 6397 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 6398 DDVAKAAKSKCESDKKAQSDGKKPE 6472 Score = 40.5 bits (82), Expect(8) = 2e-84 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 6020 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 6124 Score = 33.1 bits (66), Expect(8) = 2e-84 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +2 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 5033 KIKFKIPPFDGKYDTDAYLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVW 5194 Score = 25.4 bits (49), Expect(8) = 2e-84 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +2 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 5750 QCHRCKGFGHVQRDCPSKR 5806 Score = 62.5 bits (130), Expect(2) = 7e-17 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 7155 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 7021 Score = 46.4 bits (95), Expect(2) = 7e-17 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 7008 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 6859 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 7162 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLRFKCCFPFITQLHTNLV 7016 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 6988 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 6860 Score = 31.3 bits (62), Expect(2) = 0.83 Identities = 13/44 (29%), Positives = 21/44 (47%) Frame = +1 / +2 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + +G ++ Sbjct: 6095 EMVEKLALSTKPHPHPYYI*WLNNSGKAKVTKLVHINFVIGNYH 6226 Score = 30.4 bits (60), Expect(2) = 0.83 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 / +1 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT++ + +DE Sbjct: 6973 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NEVWVV*VVSDAFWFN*CTQHFHEVDE 7143 Score = 25.4 bits (49), Expect(2) = 7.2 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +3 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK + GC++G* C L MH Sbjct: 7041 MNGKQHLKRSLGCMSG**CLLV*LMH 7118 Score = 24.9 bits (48), Expect(2) = 7.2 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +3 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 6861 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 6989
>LOC_Os10g16560:12010.t01221:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8062 Score = 97.3 bits (206), Expect(8) = 4e-84 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2416 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 2595 Score = 82.6 bits (174), Expect(8) = 4e-84 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2098 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 2271 Score = 74.4 bits (156), Expect(8) = 4e-84 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2275 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 2424 Score = 65.2 bits (136), Expect(8) = 4e-84 Identities = 33/104 (31%), Positives = 58/104 (55%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E ED Sbjct: 655 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 966 Score = 62.9 bits (131), Expect(8) = 4e-84 Identities = 21/50 (42%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIII 1836 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ Sbjct: 1642 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVL 1791 Score = 40.5 bits (82), Expect(8) = 4e-84 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 1548 Score = 31.8 bits (63), Expect(8) = 4e-84 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPESTRVRAATSEFTDFASVW 615 Score = 25.4 bits (49), Expect(8) = 4e-84 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 1171 QCHRCKGFGHVQRDCPSKR 1227 Score = 62.5 bits (130), Expect(3) = 3e-19 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -3 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2579 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 2445 Score = 46.4 bits (95), Expect(3) = 3e-19 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2432 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2283 Score = 39.6 bits (80), Expect(3) = 3e-19 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 / -3 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE L LP C+ S SNC GL R + T SH+T Sbjct: 1784 IFLSWYRKEYWLDLP*CIESLSNCHGLPSRILHACMGTTSHST 1656 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -2 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2586 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLRFKCCFPFITQLHTNLV 2440 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -2 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2412 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2284 Score = 49.2 bits (101), Expect(3) = 2e-07 Identities = 18/33 (54%), Positives = 27/33 (81%) Frame = +3 / +2 Query: 2436 GLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 GL+E+ VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 5591 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDK 5689 Score = 33.6 bits (67), Expect(3) = 2e-07 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYH 1650 Score = 24.9 bits (48), Expect(3) = 2e-07 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 2285 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 2413
>LOC_Os02g19870:12002.t01779:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9949 Score = 90.9 bits (192), Expect(8) = 7e-84 Identities = 37/60 (61%), Positives = 48/60 (80%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DE KTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 6635 KIDLRSGYHQIRMKLGDE*KTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 6814 Score = 84.0 bits (177), Expect(8) = 7e-84 Identities = 33/58 (56%), Positives = 46/58 (79%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 6317 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVP 6490 Score = 76.2 bits (160), Expect(8) = 7e-84 Identities = 30/50 (60%), Positives = 37/50 (74%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 6494 LLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKID 6643 Score = 70.7 bits (148), Expect(8) = 7e-84 Identities = 35/99 (35%), Positives = 58/99 (58%) Frame = +1 / +2 Query: 823 MKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQVARYI 1002 MK +++ RF+P+ + L + Q + N+SV +Y + +RC L EN+D +AR++ Sbjct: 4811 MKRVMRARFVPSYHARDLLHKLQQLKQRNKSVEEYYQALQTGMLRCGLVENDDAGMARFM 4990 Query: 1003 NGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 GLN IQD L ++ SI++ LA K ER V+ R+ + Sbjct: 4991 GGLNREIQDILAYKEYNSINRLFHLACKAEREVQGRRAS 5107 Score = 64.3 bits (134), Expect(8) = 7e-84 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +1 / +2 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 5813 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 5965 Score = 38.6 bits (78), Expect(8) = 7e-84 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 5612 TKCVIKERSCRVIIDGGSCNNLASAEMVEKLALST 5716 Score = 29.5 bits (58), Expect(8) = 7e-84 Identities = 15/54 (27%), Positives = 22/54 (40%) Frame = +1 / +2 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L +D F +FPE+ RV + + W Sbjct: 4595 KIKFTIPCFDGKYDPDAYLTWELAIDQKFTCHDFPENKRVRAATSEFTDFASIW 4756 Score = 27.2 bits (53), Expect(8) = 7e-84 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +3 / +1 Query: 189 CCFKWYQSPVDPYKFFLSPL 248 CC KWYQS + F++ L Sbjct: 3061 CCIKWYQSSSCSVRDFITSL 3120 Score = 59.7 bits (124), Expect(2) = 2e-15 Identities = 25/45 (55%), Positives = 31/45 (68%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS +P+ + KAVFHSS +RI Sbjct: 6798 RKTSFINLMKVLGALVRPKGMTNHSYSPNLVLKAVFHSSPNFMRI 6664 Score = 44.6 bits (91), Expect(2) = 2e-15 Identities = 23/50 (46%), Positives = 27/50 (54%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM +PSF G Sbjct: 6651 LRKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSFLG 6502 Score = 33.6 bits (67), Expect(2) = 0.14 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 / +2 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 5687 EMVEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 5824 Score = 30.9 bits (61), Expect(2) = 0.14 Identities = 10/24 (41%), Positives = 18/24 (75%) Frame = +2 / +1 Query: 2435 RVV*MGSHAIWTLKCTKYLYALDE 2506 R +*+ SHA+W+ CT+Y + ++E Sbjct: 6715 RTI*VVSHALWSH*CTQYFHEINE 6786
>LOC_Os11g21960:12011.t01866:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9536 Score = 95.5 bits (202), Expect(8) = 7e-84 Identities = 36/60 (60%), Positives = 48/60 (80%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKT K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 6438 KVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 6617 Score = 82.6 bits (174), Expect(8) = 7e-84 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 6120 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 6293 Score = 74.4 bits (156), Expect(8) = 7e-84 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 6297 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 6446 Score = 66.6 bits (139), Expect(8) = 7e-84 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +3 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 5664 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSSEDILR 5843 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 5844 DDVAKAAKSKCESDKKAQSDGKKPE 5918 Score = 65.2 bits (136), Expect(8) = 7e-84 Identities = 33/104 (31%), Positives = 58/104 (55%) Frame = +1 / +3 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E ED Sbjct: 4677 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDTA 4856 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 4857 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 4988 Score = 39.1 bits (79), Expect(8) = 7e-84 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +3 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 5466 TKCVLKERCCRMIIDGGSCNNLASSEMVEKLALST 5570 Score = 32.2 bits (64), Expect(8) = 7e-84 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +3 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 4476 KIKFKIPPFDGKYDPDAFLSWEIAVDQKFAYHEFPENTRVRAATSEFTDFASVW 4637 Score = 25.4 bits (49), Expect(8) = 7e-84 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +3 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 5193 QCHRCKGFGHVQRDCPSKR 5249 Score = 60.6 bits (126), Expect(3) = 2e-18 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ VFHSS IRI Sbjct: 6601 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNVVFHSSPNFIRI 6467 Score = 46.4 bits (95), Expect(3) = 2e-18 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 6454 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 6305 Score = 39.6 bits (80), Expect(3) = 2e-18 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 / -2 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE L LP C+ S SNC GL R + T SH+T Sbjct: 5806 IFLSWYRKEYWLDLP*CIESLSNCHGLPSRILHACMGTTSHST 5678 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 6608 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLRFKCCFPFITQLHTNLV 6462 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 6434 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 6306 Score = 34.5 bits (69), Expect(2) = 0.073 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = +1 / +3 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ +K+TK + ++G ++ Sbjct: 5541 EMVEKLALSTKPHPHPYYIQWLNNSGKVKVTKLVHINFAIGNYH 5672 Score = 30.9 bits (61), Expect(2) = 0.073 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 / +2 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT++ + +DE Sbjct: 6419 WLYCVLQS*FA*WLPPDSYEVG**MENNI*NEVWVV*VVSDAFWFN*CTQHFHEVDE 6589 Score = 25.4 bits (49), Expect(2) = 7.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +1 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK + GC++G* C L MH Sbjct: 6487 MNGKQHLKRSLGCMSG**CLLV*LMH 6564 Score = 24.9 bits (48), Expect(2) = 7.3 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +1 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 6307 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 6435
>LOC_Os04g17840:12004.t01531:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5509 Score = 95.5 bits (202), Expect(8) = 1e-83 Identities = 36/60 (60%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPS+FM LMN+VLR F+ + Sbjct: 2416 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSSFMRLMNEVLRPFIGK 2595 Score = 80.3 bits (169), Expect(8) = 1e-83 Identities = 32/58 (55%), Positives = 43/58 (74%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P+ GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES SPC VP Sbjct: 2098 LPPVHGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESFSPCAVP 2271 Score = 70.7 bits (148), Expect(8) = 1e-83 Identities = 28/50 (56%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIP LD MLD LS + +F+K+D Sbjct: 2275 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPSLDYMLDELSGSVVFSKVD 2424 Score = 66.1 bits (138), Expect(8) = 1e-83 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 1642 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 1821 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 1822 DDVAKAAKSKCESDKKAQSDGKKPE 1896 Score = 64.8 bits (135), Expect(8) = 1e-83 Identities = 33/104 (31%), Positives = 58/104 (55%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E ED Sbjct: 655 QTWDALKRVMQARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 966 Score = 40.0 bits (81), Expect(8) = 1e-83 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID C NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGRCNNLASSEMVEKLALST 1548 Score = 32.2 bits (64), Expect(8) = 1e-83 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVW 615 Score = 25.4 bits (49), Expect(8) = 1e-83 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 1171 QCHRCKGFGHVQRDCPSKR 1227 Score = 61.1 bits (127), Expect(3) = 5e-18 Identities = 25/45 (55%), Positives = 31/45 (68%) Frame = -3 / -3 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +K+LGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2579 RKTSFINLMKLLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 2445 Score = 44.6 bits (91), Expect(3) = 5e-18 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N L+ S+I S+ GIG Y V+ L L S H+ +PSFFG Sbjct: 2432 LRKSTLENTTEPLNSSSI*SKLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2283 Score = 37.7 bits (76), Expect(3) = 5e-18 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -2 / -3 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE LP C+ S SNC GL R + T SH+T Sbjct: 1784 IFLSWYRKEYWFDLP*CIESLSNCHGLPSRILHACMGTTSHST 1656 Score = 39.6 bits (80), Expect(2) = 4e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -2 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2586 ERTQNLIHQPHETAGCIS*TKRHH*PLIQPKLCFKCCFPFITQLHTNLV 2440 Score = 39.6 bits (80), Expect(2) = 4e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -2 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2412 EHNRATQFIKHII*TRNRMTISNGNVINSSTINTHTP*TIFLW 2284 Score = 33.6 bits (67), Expect(2) = 0.061 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYH 1650 Score = 31.3 bits (62), Expect(2) = 0.061 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + K VV*+ S A W CT+ + +DE Sbjct: 2397 WLCCVLQS*FA*WLPPDSYEVG**MENSI*NKVWVV*VVSDAFWFN*CTQQFHEVDE 2567
>LOC_Os04g18400:12004.t01582:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5447 Score = 95.9 bits (203), Expect(8) = 8e-83 Identities = 36/60 (60%), Positives = 49/60 (81%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAP+TFM LMN+VLR F+ + Sbjct: 5007 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPNTFMRLMNEVLRPFIEK 5186 Score = 76.2 bits (160), Expect(8) = 8e-83 Identities = 31/58 (53%), Positives = 43/58 (74%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P+ GI++ IDLI GASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 4689 LLPVHGIEHQIDLILGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 4862 Score = 74.4 bits (156), Expect(8) = 8e-83 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 4866 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 5015 Score = 67.0 bits (140), Expect(8) = 8e-83 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +3 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 4233 NYHDVVECDVVPMQACNILLGRPWQFDKDSLHHGRSNQYSFLYHDKKIVLHPMSSEDILH 4412 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 4413 DDVAKAAKSKCESDKKAQSDGKKPE 4487 Score = 60.2 bits (125), Expect(8) = 8e-83 Identities = 31/104 (29%), Positives = 56/104 (53%) Frame = +1 / +3 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E + C L E ED Sbjct: 3246 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLHCTLEETEDAA 3425 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 3426 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 3557 Score = 40.5 bits (82), Expect(8) = 8e-83 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +3 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 4035 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 4139 Score = 32.2 bits (64), Expect(8) = 8e-83 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +3 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 3045 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVW 3206 Score = 25.4 bits (49), Expect(8) = 8e-83 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +3 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 3762 QCHRCKGFGHVQRDCPSKR 3818 Score = 62.5 bits (130), Expect(3) = 2e-18 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 5170 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 5036 Score = 46.4 bits (95), Expect(3) = 2e-18 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 5023 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 4874 Score = 35.4 bits (71), Expect(3) = 2e-18 Identities = 18/43 (41%), Positives = 21/43 (48%) Frame = -2 / -2 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE LP C S SNC GL R + T SH+T Sbjct: 4375 IFLSWYRKEYWFDLP*CKESLSNCHGLPSRILHACMGTTSHST 4247 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 5177 ERTQNLIHQPHESVGCIS*TKRHH*PLIQPKLRFKCCFPFITQLHTNLV 5031 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 5003 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 4875 Score = 33.6 bits (67), Expect(2) = 0.11 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +3 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 4110 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYH 4241 Score = 30.4 bits (60), Expect(2) = 0.11 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 / +2 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT++ + +DE Sbjct: 4988 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NEVWVV*VVSDAFWFN*CTQHFHEVDE 5158 Score = 25.4 bits (49), Expect(2) = 7.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +1 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK + GC++G* C L MH Sbjct: 5056 MNGKQHLKRSLGCMSG**CLLV*LMH 5133 Score = 24.9 bits (48), Expect(2) = 7.6 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +1 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 4876 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 5004
>LOC_Os04g16600:12004.t01419:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9279 Score = 96.4 bits (204), Expect(7) = 2e-82 Identities = 36/56 (64%), Positives = 47/56 (83%) Frame = +3 / +1 Query: 2367 KARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2428 RSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 2595 Score = 82.6 bits (174), Expect(7) = 2e-82 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2098 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 2271 Score = 73.5 bits (154), Expect(7) = 2e-82 Identities = 29/50 (58%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K D Sbjct: 2275 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKAD 2424 Score = 66.1 bits (138), Expect(7) = 2e-82 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 1642 NYHDVVECDVVPMQVCNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 1821 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 1822 DDVAKAAKSKCESDKKAQSDGKKPE 1896 Score = 62.9 bits (131), Expect(7) = 2e-82 Identities = 32/104 (30%), Positives = 57/104 (54%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RC L E ED Sbjct: 655 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQICLLRCKLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 966 Score = 40.5 bits (82), Expect(7) = 2e-82 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 1548 Score = 32.2 bits (64), Expect(7) = 2e-82 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 454 KIKFKIPPFDGKYDHDAYLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVW 615 Score = 63.8 bits (133), Expect(3) = 1e-23 Identities = 26/52 (50%), Positives = 39/52 (75%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQ 2510 KI ++ +HQ+RIR +D KTA + GL+E+ +M FGL+NAP+ FM+LMN+ Sbjct: 6728 KIDLRSGYHQLRIREKDIPKTAFTTRYGLYEFTMMSFGLTNAPAFFMNLMNK 6883 Score = 53.8 bits (111), Expect(3) = 1e-23 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 6587 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 6736 Score = 31.8 bits (63), Expect(3) = 1e-23 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +3 / +2 Query: 2130 MSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 M+ E +K+++EEL +KG+IR S SP P Sbjct: 6488 MAANELAEVKKQLEELKEKGYIRPSTSPWGAP 6583 Score = 62.5 bits (130), Expect(3) = 4e-19 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2579 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 2445 Score = 46.4 bits (95), Expect(3) = 4e-19 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2432 LRKSALENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2283 Score = 39.6 bits (80), Expect(3) = 4e-19 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 / -2 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE L LP C+ S SNC GL R + T SH+T Sbjct: 1784 IFLSWYRKEYWLDLP*CIESLSNCHGLPSRILHTCMGTTSHST 1656 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2586 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLRFKCCFPFITQLHTNLV 2440 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2412 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2284 Score = 36.3 bits (73), Expect(3) = 3e-07 Identities = 22/47 (46%), Positives = 26/47 (55%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A LS*SN S RG G L+L V L L S H+ SFF Sbjct: 6738 RSILENTVAPLS*SNRSSIRGRGYLFLMVTSLRAL*STHILFVLSFF 6598 Score = 29.0 bits (57), Expect(3) = 3e-07 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -3 / -1 Query: 2506 FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 FIK +K GA PN + +S +P + AVF S +R Sbjct: 6879 FIKFMKKAGALVKPNDIMVNSYSPYRVVNAVFGISFSRMR 6760 Score = 27.2 bits (53), Expect(3) = 3e-07 Identities = 15/48 (31%), Positives = 20/48 (41%) Frame = -3 / -1 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G G +L R+ PF NSS + SF + PG +SI Sbjct: 6582 GAPQGEVLGRIYPFSFNSSNCFLTSASSFAAIW*GRLYRGVVPGARSI 6439 Score = 33.6 bits (67), Expect(2) = 0.18 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYH 1650 Score = 30.4 bits (60), Expect(2) = 0.18 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT++ + +DE Sbjct: 2397 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NEVWVV*VVSDAFWFN*CTQHFHEVDE 2567 Score = 25.4 bits (49), Expect(2) = 7.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +2 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK + GC++G* C L MH Sbjct: 2465 MNGKQHLKRSLGCMSG**CLLV*LMH 2542 Score = 24.9 bits (48), Expect(2) = 7.3 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 2285 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 2413
>LOC_Os11g23970:12011.t02017:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5509 Score = 95.0 bits (201), Expect(7) = 1e-81 Identities = 36/60 (60%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LM++VLR F+ + Sbjct: 2416 KVDLRSGYHQIRMKLGDEWKTAFKMKFGLYEWLVMPFGLTNAPSTFMRLMSEVLRPFIGK 2595 Score = 82.6 bits (174), Expect(7) = 1e-81 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2098 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 2271 Score = 74.4 bits (156), Expect(7) = 1e-81 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2275 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVD 2424 Score = 66.1 bits (138), Expect(7) = 1e-81 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 1642 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 1821 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 1822 DDVAKAAKSKCESDKKAQSDGKKPE 1896 Score = 56.5 bits (117), Expect(7) = 1e-81 Identities = 26/74 (35%), Positives = 42/74 (56%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ L + Q +G +SV +Y +E +RCNL E ED Sbjct: 655 QTWDALKRVMRARFVPSYYAHDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQD 1029 +AR++ GLN I D Sbjct: 835 MARFLGGLNREIYD 876 Score = 40.5 bits (82), Expect(7) = 1e-81 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 1548 Score = 32.2 bits (64), Expect(7) = 1e-81 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVW 615 Score = 60.2 bits (125), Expect(3) = 7e-19 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -3 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T I +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2579 RKTSLINLMKVLGALVKPKGITNHSYNPNFILNAVFHSSPNFIRI 2445 Score = 46.4 bits (95), Expect(3) = 7e-19 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2432 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2283 Score = 39.6 bits (80), Expect(3) = 7e-19 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 / -3 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE L LP C+ S SNC GL R + T SH+T Sbjct: 1784 IFLSWYRKEYWLDLP*CIESLSNCHGLPSRILHACMGTTSHST 1656 Score = 38.2 bits (77), Expect = 0.27 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = -1 / -2 Query: 2349 TKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2397 TQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2284 Score = 33.6 bits (67), Expect(2) = 0.66 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYH 1650 Score = 27.6 bits (54), Expect(2) = 0.66 Identities = 18/57 (31%), Positives = 28/57 (49%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT + + +DE Sbjct: 2397 WLYCVFQS*FA*WLPPDSYEVG**MENSI*NEVWVV*VVSDAFWFN*CT*HFHEVDE 2567
>LOC_Os05g15030:12005.t01275:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5108 Score = 95.0 bits (201), Expect(7) = 1e-81 Identities = 37/60 (61%), Positives = 47/60 (78%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWK A K K GL+EW+VMPFGL+NAPSTFM LMN VLR F+ + Sbjct: 2866 KIDLRSGYHQIRMKEGDEWKIAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGK 3045 Score = 84.9 bits (179), Expect(7) = 1e-81 Identities = 34/58 (58%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN P R +P+E + ++V+ELL KG++RES+SPC VP Sbjct: 2548 LPPIRGIEHQIDLIPGASLPNRPPYRTNPEETKEI*RQVQELLNKGYVRESLSPCVVP 2721 Score = 73.9 bits (155), Expect(7) = 1e-81 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDG+ MC D + + I+VRYR PIPRLD MLD LS A +F+K+D Sbjct: 2725 ILVPKKDGTWRMCVDCRAINSISVRYRHPIPRLDDMLDELSGAVIFSKID 2874 Score = 68.4 bits (143), Expect(7) = 1e-81 Identities = 29/90 (32%), Positives = 52/90 (57%) Frame = +1 / +3 Query: 757 WWHRVQEERMLRGEPRGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEE 936 WW ++ +R E T +MK ++ RF+P+ + LF + QN +G RSV +Y +E Sbjct: 1002 WWEQMLNQREEHDELAVATWVEMKHEMRARFVPSHYKRDLFERLQNMRQGTRSVEEYYKE 1181 Query: 937 FLRLQVRCNLAENEDQQVARYINGLNDAIQ 1026 + +R + E+E+Q +AR++ GLN ++ Sbjct: 1182 MEKAMIRAKVKEDEEQTMARFLVGLNHPVK 1271 Score = 56.5 bits (117), Expect(7) = 1e-81 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y V CD+V M H+LL RPWQ+D H G+ + Y W ++ I++ P Sbjct: 2058 YCDTVECDVVPMTVCHLLLGRPWQYDRAAQHDGRTNQYKLRWKEKDIVLRP 2210 Score = 40.5 bits (82), Expect(7) = 1e-81 Identities = 15/33 (45%), Positives = 24/33 (72%) Frame = +2 / +3 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKL 1585 +K V+GKVCK++ID +C +L S+++ N L L Sbjct: 1857 TKAKVDGKVCKVIIDGGSCHSLASKEICNKLGL 1955 Score = 27.2 bits (53), Expect(7) = 1e-81 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = +1 / +3 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C+KC GH+ CP K Sbjct: 1581 QCFKCLGRGHMQKDCPNNK 1637 Score = 63.8 bits (133), Expect(3) = 6e-26 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = -3 / -1 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI* 2381 RT*FI+ + VLGA P G+T HS NP+F+ KA+FHSS IRI* Sbjct: 3026 RT*FIRRMNVLGALVKPKGITNHSYNPNFVLKAIFHSSPSFIRI* 2892 Score = 48.3 bits (99), Expect(3) = 6e-26 Identities = 26/50 (52%), Positives = 28/50 (56%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N A LS S+I S GIG YLT + L L S HM PSFFG Sbjct: 2882 LRKSILENMTAPLSSSSISSSLGIGWRYLTEMLLIALQSTHMRHVPSFFG 2733 Score = 45.1 bits (92), Expect(3) = 6e-26 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = -2 / -3 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILNS 2067 T F+ +P + +FLH L + W + W + + C RNQVN + N+ Sbjct: 2712 TRTKAFTYIPFV*KFLHLSLNFFCFLWIGTIRWTVGKRCPRNQVNLMFNT 2563 Score = 51.9 bits (107), Expect(2) = 1e-10 Identities = 21/45 (46%), Positives = 29/45 (64%) Frame = -2 / -3 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 ++IHQ H+ TWCI ++K H P Q L +G FPFIP ++LM Sbjct: 3024 NMIHQTHECTWCISQTKRHY*PLIQSKLCFKGNFPFIPFFHSNLM 2890 Score = 35.9 bits (72), Expect(2) = 1e-10 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -1 / -3 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLWRE 2230 E TK I H I+ NR +I + +N + TH +IFLW + Sbjct: 2862 EYDSTTKFI*HIIKPRNRMAISNRNAINCSTINTHAPCTIFLWNK 2728 Score = 43.7 bits (89), Expect(3) = 6e-07 Identities = 22/45 (48%), Positives = 29/45 (64%) Frame = +2 / +3 Query: 2375 ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDES 2509 + SN + G*MEN L K +V*+ S+A W CTKY++A DES Sbjct: 2886 LPSNSNERRG*MENCL*NKVWIV*VVSNAFWFD*CTKYIHASDES 3020 Score = 25.4 bits (49), Expect(3) = 6e-07 Identities = 17/56 (30%), Positives = 25/56 (44%) Frame = +1 / +2 Query: 2053 CHR*KEFNIVLT*FREQVSLIFHTVE*AQKSMIY*SREWRNCCKRGTFEKVLAHVL 2220 CH+ NI LT*F + H + Q+ S + +N +G + K L VL Sbjct: 2549 CHQFVVLNIKLT*FLGHLFPTVHLIVPIQRKQKKFSDKCKNF*TKGMYVKALVLVL 2716 Score = 22.6 bits (43), Expect(3) = 6e-07 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLV 2350 QRKM CV ++ L I LF M+C ++LV Sbjct: 2735 QRKMVHGACVLIVEQLIAFLLDIAILFLGLMIC*MNLV 2848 Score = 38.2 bits (77), Expect = 0.27 Identities = 19/36 (52%), Positives = 23/36 (63%) Frame = +1 / +2 Query: 2401 GMNGKPP*RERKGCLNG*SCHLDSQMHQVPLCT**I 2508 GMNGK P ++ C++G* C L MHQV C **I Sbjct: 2912 GMNGKLPLKQSLDCMSG**CLLV*LMHQVHSCV**I 3019 Score = 37.3 bits (75), Expect(2) = 0.34 Identities = 21/43 (48%), Positives = 24/43 (55%) Frame = -1 / -2 Query: 2508 DSSSA*RYLVHLRVQMA*LPIQTTLPFSSRRFSIHPGV*YGFD 2380 DSS A* YLVH Q A L T R+FSIHP + + FD Sbjct: 3019 DSSDA*MYLVH*SNQKALLTTHTIQTLF*RQFSIHPLLSFEFD 2891 Score = 24.9 bits (48), Expect(2) = 0.34 Identities = 12/33 (36%), Positives = 15/33 (45%) Frame = -2 / -2 Query: 1787 PLCVVSTSNCQGLTRRTWLVSISTMSHNTFER* 1689 P C + S C GL I T SH+T +* Sbjct: 2155 PSCCAARSYCHGLPSSK*HTVIGTTSHSTVSQ* 2057
>LOC_Os12g22610:12012.t01999:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7825 Score = 94.5 bits (200), Expect(9) = 3e-81 Identities = 37/60 (61%), Positives = 47/60 (78%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI + +HQIR++ DEWKT K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 5093 KIGLHSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 5272 Score = 75.8 bits (159), Expect(9) = 3e-81 Identities = 32/58 (55%), Positives = 43/58 (74%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R + +E + +V+ELL KG++RES+SPC VP Sbjct: 4775 LPPIRGIEHQIDLIPGASLPNRVPYRTNQEETKEI*HQVQELLDKGYMRESLSPCVVP 4948 Score = 74.4 bits (156), Expect(9) = 3e-81 Identities = 29/49 (59%), Positives = 37/49 (75%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKL 2373 LL KKDGS HMC D + + IT+RYR PIPRLD MLD LS +++F+K+ Sbjct: 4952 LLVSKKDGSWHMCLDCRAINNITIRYRHPIPRLDDMLDELSGSQVFSKI 5098 Score = 61.6 bits (128), Expect(9) = 3e-81 Identities = 34/104 (32%), Positives = 54/104 (51%) Frame = +1 / +2 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T* MK +++ RF+P+ L Q GN+ V +Y + + C L EN+D Sbjct: 3254 QT*DAMKTVIRARFVPSYHAHDLLHTLQQLR*GNKYVEEYYQALQTGMLHCGLVENDDAG 3433 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D L ++ SI+ A K ER V+ R+ + Sbjct: 3434 MARFMGGLNREI*DILAYKEYNSINHLFHHACKAEREVQGRRAS 3565 Score = 57.9 bits (120), Expect(9) = 3e-81 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = +1 / +2 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD V M +LL R WQFD D+ H GK + YSF+ N +++++ P Sbjct: 4271 YHDSINCDTVPMQACSMLLGRLWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 4423 Score = 40.5 bits (82), Expect(9) = 3e-81 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S K+V L L T Sbjct: 4070 TKCVIKERSCRVIIDGGSCNNLASAKMVEKLTLST 4174 Score = 31.3 bits (62), Expect(9) = 3e-81 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +1 / +2 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L +D F+ +FPE+ RV + + W Sbjct: 3053 KIKFTIPCFDGKYDPDAYLTWELAIDQKFDCHDFPENKRVRAATSEFTNFASIW 3214 Score = 29.0 bits (57), Expect(9) = 3e-81 Identities = 11/43 (25%), Positives = 20/43 (46%) Frame = +1 / +2 Query: 1570 EPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E S P+PY I W+ +K+T+ ++G ++ S Sbjct: 4154 EKLTLSTQPQPHPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 4282 Score = 25.8 bits (50), Expect(9) = 3e-81 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = +3 / +1 Query: 189 CCFKWYQS 212 CC KWYQS Sbjct: 1291 CCIKWYQS 1314 Score = 57.4 bits (119), Expect(3) = 3e-18 Identities = 24/45 (53%), Positives = 29/45 (64%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + K VFHSS +RI Sbjct: 5256 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKVVFHSSPNFMRI 5122 Score = 44.6 bits (91), Expect(3) = 3e-18 Identities = 22/48 (45%), Positives = 26/48 (54%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSF 2241 L K N L+ S+I S GIG YL V+ L L S HMC +PSF Sbjct: 5109 LCKPILENTCEPLNSSSISSSLGIG*RYLIVMLLIALQSKHMCHEPSF 4966 Score = 29.0 bits (57), Expect(3) = 3e-18 Identities = 13/52 (25%), Positives = 25/52 (48%) Frame = -2 / -1 Query: 2225 GYRTWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 G T +++PL++ FL+ +L + + + RN+VN +LN Sbjct: 4948 GNNTRTKRLTHIPLVE*FLYLMLNLLCFLLVGPVWHTVWQRGPRNEVNLVLN 4793 Score = 31.3 bits (62), Expect(2) = 0.004 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = +3 / +1 Query: 2241 ERWILTHVYGH*SR*EDHRKV 2303 ERW++ HV+G *S *+ H ++ Sbjct: 4966 ERWLMAHVFGL*SN*QHHNQI 5028 Score = 30.4 bits (60), Expect(2) = 0.004 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +2 / +1 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R V*+ SHA+W+ C +Y + ++E Sbjct: 5143 *MENNF*N*IRPV*VVSHALWSH*CAQYFHEINE 5244
>LOC_Os03g29940:12003.t02604:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6627 Score = 91.8 bits (194), Expect(9) = 3e-80 Identities = 36/58 (62%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFL 2528 KI ++ +HQIR++ DEWKT K K GL+EW+VMPFGL+N PSTFM LMN+VLR F+ Sbjct: 3919 KIDLRSGYHQIRMKLGDEWKTPFKTKFGLYEWLVMPFGLTNTPSTFMCLMNEVLRPFI 4092 Score = 78.5 bits (165), Expect(9) = 3e-80 Identities = 29/58 (50%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V++LL +G++R+S+SPC VP Sbjct: 3601 LPPMRGIEHQIDLIPGASLPNRAAYRTNPEETKEIQRQVQDLLDRGYVRQSLSPCAVP 3774 Score = 73.9 bits (155), Expect(9) = 3e-80 Identities = 29/50 (58%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD L + +FTK+D Sbjct: 3778 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELCDSIIFTKID 3927 Score = 58.3 bits (121), Expect(9) = 3e-80 Identities = 21/50 (42%), Positives = 32/50 (64%) Frame = +1 / +2 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIIL 1839 Y +V CD+V M +LL RPW+ D D TH G+ + Y+F+ N ++I +L Sbjct: 3116 YADSVDCDVVPMQACSLLLGRPWEHDNDATHHGRSNKYTFVHNGKKIALL 3265 Score = 53.8 bits (111), Expect(9) = 3e-80 Identities = 25/101 (24%), Positives = 54/101 (53%) Frame = +1 / +2 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQV 990 T +++K ++ RF+P + L + +G++SV DY E + RC + E + + Sbjct: 2126 TWEELKVAMRDRFVPPSYHRDLRKKLMRLEQGDKSVQDYYGELQKGVRRCGIVEGVEDAI 2305 Query: 991 ARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRK 1113 R+ +GL + IQ+ + ++ S++Q A+ E+ ++ R+ Sbjct: 2306 CRFYSGLREEIQNIVDCKEFNSVNQLFQFAILAEKELQGRE 2428 Score = 37.7 bits (76), Expect(9) = 3e-80 Identities = 21/54 (38%), Positives = 26/54 (48%) Frame = +1 / +2 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK +I +FSG D E LD V+ F PE HRV V+ + K W Sbjct: 1928 KVKFKIPSFSGYYDAEK*LDWEMTVEQKFNAHLVPEQHRVRQVSSEFKDFTIMW 2089 Score = 34.1 bits (68), Expect(9) = 3e-80 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +2 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 3026 HPHPYHIQWLNDSGRAKVTQVCRVLFSIGSY 3118 Score = 30.9 bits (61), Expect(9) = 3e-80 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 / +2 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + +++ID +C NL+S LV L L T Sbjct: 2927 INNRRARVIIDGGSCNNLVSFDLVKKLGLTT 3019 Score = 26.7 bits (52), Expect(9) = 3e-80 Identities = 8/39 (20%), Positives = 19/39 (48%) Frame = +1 / +2 Query: 1204 KVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCPLRK 1320 K +P +++ + +C++C GH+ CP ++ Sbjct: 2600 KSSSQVPAKSASSVASTGRIQCHRCQGFGHVQKDCPSQR 2716 Score = 51.5 bits (106), Expect(3) = 6e-19 Identities = 22/44 (50%), Positives = 27/44 (61%) Frame = -3 / -2 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLG P G+T HS P+ + K VFHSS I I Sbjct: 4079 KTSFIKHMKVLGVLVKPKGITNHSYKPNLVLKGVFHSSPSFILI 3948 Score = 43.7 bits (89), Expect(3) = 6e-19 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + + S++ S GIG Y VI L L S H+ Q+PSF G Sbjct: 3935 LRKSIFVKIIESHNSSSMSSNLGIG*RYRIVILLMALQSTHIRQEPSFLG 3786 Score = 38.2 bits (77), Expect(3) = 6e-19 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = -2 / -1 Query: 2222 YRTWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILNSFYR*QPCG 2043 Y T + +P +Q+ L+ L ++ L W S + + CS NQ+N +L +R Q G Sbjct: 3771 YCTRTKALTYIPTVQKILNLSLNFLSLLWVGSISSTVWQ*CSWNQINLMLYPSHRWQSRG 3592 Score = 40.5 bits (82), Expect(2) = 3e-07 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+LI+H I NR +I +++N + TH R+IFL Sbjct: 3930 QVNLCENYRITQLIKHVI*PRNRMTISDSNIINGSTINTHSPRTIFL 3790 Score = 35.9 bits (72), Expect(2) = 3e-07 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -1 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 4077 NLIH*AHESTRCISQTKRHY*PLIQTKFSFERCFPFISKFHSNLVVATTQVNL 3919
>LOC_Os12g15350:12012.t01392:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5947 Score = 97.7 bits (207), Expect(9) = 5e-80 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2260 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGR 2439 Score = 74.4 bits (156), Expect(9) = 5e-80 Identities = 28/58 (48%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V++LL + ++R+S+SPC VP Sbjct: 1942 LPPMRGIEHQIDLIPGASLPNRAAYRTNPEETKEIQRQVQDLLDRWYVRQSLSPCVVP 2115 Score = 72.1 bits (151), Expect(9) = 5e-80 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPR D MLD L + +FTK+D Sbjct: 2119 ILVPKKDGSWRMCVDYRAINNITIRYRHPIPRSDDMLDELCGSIIFTKID 2268 Score = 61.6 bits (128), Expect(9) = 5e-80 Identities = 22/51 (43%), Positives = 33/51 (64%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y +V CD+V M +LL RPW+ D D TH G+ + Y+F+ N ++I +LP Sbjct: 1453 YADSVDCDVVPMQACSLLLGRPWEHDNDATHHGRSNKYTFVHNGKKITLLP 1605 Score = 51.5 bits (106), Expect(9) = 5e-80 Identities = 24/100 (24%), Positives = 52/100 (52%) Frame = +1 / +1 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQV 990 T +++K ++ RF+P + L + +G++SV DY E + RC + E + + Sbjct: 460 TWEELKVAMRDRFVPPSYHRDLRKKLMRLEQGDKSVQDYYGELQKGVRRCGIVEGVEDAI 639 Query: 991 ARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTR 1110 R+ +GL + I + + ++ S++Q A+ E+ ++ R Sbjct: 640 CRFYSGLREEIHNIVDCKEFNSVNQLFRFAMPAEKELQGR 759 Score = 36.8 bits (74), Expect(9) = 5e-80 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK +I +FSG D E LD V+ + PE HRV + + K W Sbjct: 262 KVKLKIPSFSGYYDAEKYLDWEMTVEQKYNAHLVPEQHRVRQASSEFKDFAIMW 423 Score = 34.1 bits (68), Expect(9) = 5e-80 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 1363 HPHPYHI*WLNDSGRAKVTQVCRVSFSIGSY 1455 Score = 29.9 bits (59), Expect(9) = 5e-80 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +2 / +1 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + +++ID +C NL+S V L L T Sbjct: 1264 INNRRARVIIDGGSCNNLVSYDFVKKLGLTT 1356 Score = 25.4 bits (49), Expect(9) = 5e-80 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 997 QCHRCQGFGHVQKDCPSQR 1053 Score = 52.8 bits (109), Expect(3) = 6e-17 Identities = 23/44 (52%), Positives = 28/44 (63%) Frame = -3 / -3 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK + VLGA P G+T HS P+ + KAVFHSS I I Sbjct: 2420 KTSFIKRMNVLGALVKPKGITNHSYKPNLVLKAVFHSSPSFILI 2289 Score = 40.0 bits (81), Expect(3) = 6e-17 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++ S GIG Y VI L L S H+ Q+PSF G Sbjct: 2276 LRKSIFVKIIEPHNSSSMSSDLGIG*RYRIVILLMAL*STHIRQEPSFLG 2127 Score = 33.6 bits (67), Expect(3) = 6e-17 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -2 / -2 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTIL 2073 T + +P +Q+ L+ L ++ L W S + + CS NQ+N +L Sbjct: 2106 TGTKALTYIPAVQKVLNLPLNFLSLLWVGSISSTVWQ*CSWNQINLML 1963 Score = 37.7 bits (76), Expect(2) = 4e-06 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = -1 / -2 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+ I+H + NR +I +++N + TH R+IFL Sbjct: 2271 QVNLCENYRATQFIKHVV*PRNRMTISDSNIINGSIINTHSPRTIFL 2131 Score = 34.5 bits (69), Expect(2) = 4e-06 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -2 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 2418 NLIH*AHECTRCISQTKRHY*PLIQTKFSFKSCFPFISKFHSNLVIATTQVNL 2260
>LOC_Os01g33220:12001.t02893:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5510 Score = 97.3 bits (206), Expect(8) = 5e-80 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2417 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 2596 Score = 82.6 bits (174), Expect(8) = 5e-80 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 2099 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 2272 Score = 74.8 bits (157), Expect(8) = 5e-80 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2276 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDNMLDELSGSIVFSKVD 2425 Score = 66.1 bits (138), Expect(8) = 5e-80 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +2 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 1643 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 1822 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 1823 DDVAKAAKSKCESDKKAQSDGKKPE 1897 Score = 45.5 bits (93), Expect(8) = 5e-80 Identities = 21/56 (37%), Positives = 33/56 (58%) Frame = +1 / +2 Query: 952 VRCNLAENEDQQVARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +RCNL E ED +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 800 LRCNLEETEDAAMARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 967 Score = 40.5 bits (82), Expect(8) = 5e-80 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 1445 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 1549 Score = 29.9 bits (59), Expect(8) = 5e-80 Identities = 16/54 (29%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ R + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRFRAATSEFTDFASVW 615 Score = 25.4 bits (49), Expect(8) = 5e-80 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +2 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 1172 QCHRCKGFGHVQRDCPSKR 1228 Score = 62.5 bits (130), Expect(3) = 7e-19 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -3 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2580 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 2446 Score = 45.5 bits (93), Expect(3) = 7e-19 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2433 LRKSTLENTIEPLNSSSILSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2284 Score = 38.2 bits (77), Expect(3) = 7e-19 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -2 / -3 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE LP C+ S SNC GL R + T SH+T Sbjct: 1785 IFLSWYRKEYWFDLP*CIESLSNCHGLPSRILQACMGTTSHST 1657 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -2 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2587 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLCFKCCFPFITQLHTNLV 2441 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -2 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2413 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2285 Score = 33.6 bits (67), Expect(2) = 0.033 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +2 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 1520 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYH 1651 Score = 32.2 bits (64), Expect(2) = 0.033 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = +2 / +1 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + K VV*+ S A W CT++ + +DE Sbjct: 2398 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NKVWVV*VVSDAFWFN*CTQHFHEVDE 2568
>LOC_Os04g18980:12004.t01639:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 12428 Score = 95.5 bits (202), Expect(7) = 1e-79 Identities = 36/60 (60%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKT K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 6310 KVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 6489 Score = 78.0 bits (164), Expect(7) = 1e-79 Identities = 30/55 (54%), Positives = 43/55 (78%) Frame = +3 / +1 Query: 2061 IKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 ++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 6001 VRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 6165 Score = 71.2 bits (149), Expect(7) = 1e-79 Identities = 28/50 (56%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + T+RYR PIPRLD MLD LS + +F+K+D Sbjct: 6169 ILVPKKDGSWRMCVDCRAINNNTIRYRHPIPRLDDMLDELSGSIVFSKVD 6318 Score = 66.1 bits (138), Expect(7) = 1e-79 Identities = 25/85 (29%), Positives = 48/85 (56%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P + + Sbjct: 5536 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILR 5715 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 5716 DDVAKAAKSKCESDKKAQSDGKKPE 5790 Score = 63.8 bits (133), Expect(7) = 1e-79 Identities = 33/104 (31%), Positives = 58/104 (55%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E ED Sbjct: 4549 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGVKSVEEYYQELQMGLLRCNLEETEDAA 4728 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 4729 MARFLGGLNREIYDIVDYKVYTNMTRLFHLACKAEREVQGRRAS 4860 Score = 40.5 bits (82), Expect(7) = 1e-79 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 5338 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 5442 Score = 32.2 bits (64), Expect(7) = 1e-79 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 4348 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVW 4509 Score = 60.6 bits (126), Expect(3) = 5e-18 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -1 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ VFHSS IRI Sbjct: 6473 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNVVFHSSPNFIRI 6339 Score = 46.9 bits (96), Expect(3) = 5e-18 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 6326 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVLLLIALQSTHIRHEPSFFG 6177 Score = 38.2 bits (77), Expect(3) = 5e-18 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -2 / -1 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE LP C+ S SNC GL R + T SH+T Sbjct: 5678 IFLSWYRKEYWFDLP*CIESLSNCHGLPSRILQACMGTTSHST 5550 Score = 40.5 bits (82), Expect(2) = 1e-07 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -3 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 6480 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLCFKCCFPFITQLHTNLV 6334 Score = 37.3 bits (75), Expect(2) = 1e-07 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -1 / -3 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G ++N + TH +IFLW Sbjct: 6306 EHNRATQFIKHII*PRNRMTISNGIVINSSTINTHTP*TIFLW 6178 Score = 42.3 bits (86), Expect(3) = 3e-07 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +3 / +3 Query: 2370 ARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFL 2528 +R+HQI I D+ KT G + + M FGL NAP++F M + + Sbjct: 11706 SRYHQIPIHLEDQSKTTFTCPYGTYAYRRMSFGLCNAPASFQRCMMSIFSDMI 11864 Score = 34.1 bits (68), Expect(3) = 3e-07 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 5413 EMVEKLALSTKPHPHPYCIQWLNNSGKAKVTKLVHINFAIGNYH 5544 Score = 31.8 bits (63), Expect(3) = 3e-07 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +1 / +3 Query: 2260 MCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 MC + + + K T + FP+P +D ML+ L+ F LD Sbjct: 11583 MCINYRKLNKTTKKDHFPLPFIDEMLERLANHSFFYFLD 11699 Score = 26.3 bits (51), Expect(2) = 4.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 / +2 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK ++ GC++G* C L MH Sbjct: 6359 MNGKQHLKQSLGCMSG**CLLV*LMH 6436 Score = 24.9 bits (48), Expect(2) = 4.0 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 6179 QRKMVHGVCVLIVELLITIPFDIVILFLG*MICLMN*VALLCS 6307
>LOC_Os06g35210:12006.t03218:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7515 Score = 90.9 bits (192), Expect(8) = 6e-78 Identities = 35/60 (58%), Positives = 47/60 (78%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWK A K K L+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 4417 KVDLRSGYHQIRMKLGDEWKIAFKTKFRLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 4596 Score = 80.3 bits (169), Expect(8) = 6e-78 Identities = 32/58 (55%), Positives = 44/58 (75%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E +++ V ELL KG++RES+SPC VP Sbjct: 4099 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQR*VHELLDKGYVRESLSPCAVP 4272 Score = 63.8 bits (133), Expect(8) = 6e-78 Identities = 25/50 (50%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + I +RYR PR D MLD LS + +F+K+D Sbjct: 4276 ILVPKKDGSWRMCVDCRAINNIIIRYRHRFPRFDDMLDELSGSIVFSKVD 4425 Score = 63.4 bits (132), Expect(8) = 6e-78 Identities = 24/85 (28%), Positives = 47/85 (55%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +Y V CD+V M ++LL RPWQFD D+ H G+ + Y F+++ ++I++ P + + Sbjct: 3643 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYFFLYHDKKIVLHPMSPEDILR 3822 Query: 1867 KEEGKSMLTISHTSNEFMEDMKEAD 1941 + K+ + + + D K+ + Sbjct: 3823 DDVAKATKSKCESDKKAQSDGKKPE 3897 Score = 62.9 bits (131), Expect(8) = 6e-78 Identities = 32/104 (30%), Positives = 57/104 (54%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E ED Sbjct: 2656 QTWDALKRVMRARFVPSYYTRDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAA 2835 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + L K ER V+ R+ + Sbjct: 2836 MARFLGGLNREIFDIVDYKDYTNMTRLFHLTCKAEREVQGRRAS 2967 Score = 40.5 bits (82), Expect(8) = 6e-78 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 3445 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 3549 Score = 31.3 bits (62), Expect(8) = 6e-78 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRV 720 K+K +I F G D + L VD F EFPE+ RV Sbjct: 2455 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRV 2574 Score = 25.4 bits (49), Expect(8) = 6e-78 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 3172 QCHRCKGFGHVQRDCPSKR 3228 Score = 57.4 bits (119), Expect(3) = 1e-14 Identities = 24/45 (53%), Positives = 30/45 (66%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS N +F+ A+FHSS IRI Sbjct: 4580 RKTSFINLMKVLGALVKPKGITNHSYNLNFVLNAIFHSSPNFIRI 4446 Score = 39.1 bits (79), Expect(3) = 1e-14 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S G Y ++ L L S H+ +PSFFG Sbjct: 4433 LRKSTLENTIEPLNSSSISSNLGKR*RYRMIMLLIALQSTHIRHEPSFFG 4284 Score = 35.9 bits (72), Expect(3) = 1e-14 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = -2 / -2 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + K+ LP C+ S SNC GL R + T SH+T Sbjct: 3785 IFLSWYRKKYWFDLP*CIESLSNCHGLPSRILHACMGTTSHST 3657 Score = 41.8 bits (85), Expect(2) = 9e-07 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 4587 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLRFKCNFPFITQLHTNLV 4441 Score = 32.7 bits (65), Expect(2) = 9e-07 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I+ +I +++N + TH +IFLW Sbjct: 4413 EHNRATQFIKHIIKPRKTMTISNDNVINSSTINTHTP*TIFLW 4285
>LOC_Os04g13180:12004.t01139:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 10673 Score = 95.9 bits (203), Expect(7) = 8e-78 Identities = 37/60 (61%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKT K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 7384 KIDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 7563 Score = 79.0 bits (166), Expect(7) = 8e-78 Identities = 32/58 (55%), Positives = 44/58 (75%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R + E ++++V+ELL KG++RES+SPC VP Sbjct: 7066 LPPIRGIEHQIDLIPGASLPNRAPYRTNSGETKEIQRQVQELLDKGYVRESLSPCAVP 7239 Score = 76.2 bits (160), Expect(7) = 8e-78 Identities = 30/50 (60%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 7243 LLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKID 7392 Score = 61.1 bits (127), Expect(7) = 8e-78 Identities = 32/96 (33%), Positives = 53/96 (55%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T MK +++ RF+P+ + L + Q +GN+ V +Y + + C L EN+D Sbjct: 5557 QTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKYVEEYYQALQTGMLCCGLVENDDAG 5736 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTER 1095 +AR + GLN IQD L ++ SI++ LA K E+ Sbjct: 5737 MARSMGGLNREIQDILAYKEYNSINRLFHLACKAEK 5844 Score = 59.7 bits (124), Expect(7) = 8e-78 Identities = 21/49 (42%), Positives = 31/49 (63%) Frame = +1 / +2 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIII 1836 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N ++ + Sbjct: 6575 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKTCV 6721 Score = 38.6 bits (78), Expect(7) = 8e-78 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 6374 TKCVIKERSCRVIIDGGSCNNLASAEMVEKLALST 6478 Score = 29.5 bits (58), Expect(7) = 8e-78 Identities = 15/54 (27%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L +D F +FPE+ RV + + W Sbjct: 5356 KIKFTIPCFDGKYDPDAYLTWELAIDQKFACHDFPENKRVRAATSEFTDFASIW 5517 Score = 57.4 bits (119), Expect(2) = 8e-15 Identities = 24/45 (53%), Positives = 29/45 (64%) Frame = -3 / -1 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + K VFHSS +RI Sbjct: 7547 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKVVFHSSPNFMRI 7413 Score = 44.6 bits (91), Expect(2) = 8e-15 Identities = 23/50 (46%), Positives = 27/50 (54%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM +PSF G Sbjct: 7400 LRKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSFLG 7251 Score = 32.2 bits (64), Expect(2) = 0.15 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 / +2 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 6449 EMVEKLALST*PHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 6586 Score = 32.2 bits (64), Expect(2) = 0.15 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 / +3 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R +*+ SHA+W+ CT+Y + ++E Sbjct: 7434 *MENNF*N*IRPI*VVSHALWSH*CTQYFHEINE 7535
>LOC_Os11g14330:12011.t01264:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7220 Score = 98.7 bits (209), Expect(9) = 9e-78 Identities = 39/58 (67%), Positives = 48/58 (82%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFL 2528 KI ++ +HQIRI+ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ Sbjct: 4647 KIDLRSGYHQIRIKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFI 4820 Score = 72.5 bits (152), Expect(9) = 9e-78 Identities = 28/58 (48%), Positives = 44/58 (75%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P E ++++V++LL +G++R+S+SP VP Sbjct: 4329 LPPMRGIEHQIDLIPGASLPNRAAYRTNPDETKEIQRQVQDLLDRGYVRQSLSPYAVP 4502 Score = 70.3 bits (147), Expect(9) = 9e-78 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PI RLD MLD L + +FTK+D Sbjct: 4506 ILVPKKDGSWRMCVDCRAINNITIRYRHPILRLDDMLDELCGSIIFTKID 4655 Score = 59.3 bits (123), Expect(9) = 9e-78 Identities = 21/51 (41%), Positives = 33/51 (64%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y +V C++V M +LL RPW+ D D TH G+ + Y+F+ N ++I +LP Sbjct: 3841 YADSVDCNVVPMQACSLLLGRPWEHDNDATHHGRSNKYTFVHNGKKITLLP 3993 Score = 51.9 bits (107), Expect(9) = 9e-78 Identities = 24/100 (24%), Positives = 53/100 (53%) Frame = +1 / +1 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQV 990 T +++K ++ RF+P + L + +G++S+ DY E + RC + E + + Sbjct: 2848 TWEELKVAMRDRFVPPSYYRDLRKKLMRLEQGDKSIQDYYGELQKGVRRCGIVEGVEDAI 3027 Query: 991 ARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTR 1110 R+ +GL + IQ+ + ++ S++Q A+ E+ ++ R Sbjct: 3028 CRFYSGLREEIQNIVDYKEFNSVNQLFRFAMLAEKELQGR 3147 Score = 35.0 bits (70), Expect(9) = 9e-78 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 3751 HPHPYHIQWLNDSGRAKVTQVCRVSFSIGSY 3843 Score = 34.5 bits (69), Expect(9) = 9e-78 Identities = 19/54 (35%), Positives = 24/54 (44%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK +I +FS D E LD V+ F PE HRV + + K W Sbjct: 2650 KVKFKIPSFSRYYDAEKYLDWEMTVEQKFNAHLIPEQHRVRQASSEFKDFAIMW 2811 Score = 30.4 bits (60), Expect(9) = 9e-78 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 / +1 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + ++ID +C NL+S LV L L T Sbjct: 3652 INNRRALVIIDGGSCNNLVSSDLVKKLGLTT 3744 Score = 25.4 bits (49), Expect(9) = 9e-78 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 3385 QCHRCQGFGHVQKDCPSQR 3441 Score = 55.1 bits (114), Expect(3) = 6e-19 Identities = 24/44 (54%), Positives = 29/44 (65%) Frame = -3 / -2 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLGA P G+T HS P+ + KAVFHSS I I Sbjct: 4807 KTSFIKRMKVLGALVKPKGITNHSYKPNLVLKAVFHSSPSFILI 4676 Score = 43.7 bits (89), Expect(3) = 6e-19 Identities = 18/47 (38%), Positives = 29/47 (61%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE + T+LI+H + NR SI +++N + TH R+IFL Sbjct: 4658 QVNLCENNRTTQLIKHVV*PKNRMSISDSNIINGSTINTHSPRTIFL 4518 Score = 34.5 bits (69), Expect(3) = 6e-19 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -2 / -1 Query: 2210 ANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTIL 2073 A + +P +Q+ L+ L ++ L W S + + CS NQ+N +L Sbjct: 4487 AKALTYIPAVQKILNLPLNFLSLIWVGSISSTVWQ*CSWNQINLML 4350 Score = 35.0 bits (70), Expect = 2.5 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -1 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 4805 NLIH*AHESTRCISQTKRHY*PLIQTKFSFKSCFPFISKFYSNLVIATTQVNL 4647
>LOC_Os12g19810:12012.t01824:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7048 Score = 91.8 bits (194), Expect(8) = 4e-77 Identities = 35/60 (58%), Positives = 47/60 (78%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWK A K K GL+EW+VMPFG +NAPSTFM LMN+VLR F+ + Sbjct: 3959 KVDLRSGYHQIRMKLDDEWKIAFKTKFGLYEWLVMPFGSTNAPSTFMRLMNEVLRPFIGK 4138 Score = 74.4 bits (156), Expect(8) = 4e-77 Identities = 31/57 (54%), Positives = 41/57 (71%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPV 2222 L P+ GI++ IDLIPGASLPN R +P+E ++ +V ELL KG +RES+SPC V Sbjct: 3641 LPPVHGIEHQIDLIPGASLPNRAPYRTNPEETKEIEHQV*ELLNKGFVRESLSPCAV 3811 Score = 72.1 bits (151), Expect(8) = 4e-77 Identities = 28/50 (56%), Positives = 36/50 (72%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RY PIPRLD MLD LS + +F+K+D Sbjct: 3818 ILVPKKDGSWRMCVDCRAINNITIRYHHPIPRLDDMLDELSGSIVFSKVD 3967 Score = 66.1 bits (138), Expect(8) = 4e-77 Identities = 23/52 (44%), Positives = 36/52 (69%) Frame = +1 / +2 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ R+I++ P Sbjct: 3185 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHARKIVLHP 3340 Score = 53.8 bits (111), Expect(8) = 4e-77 Identities = 30/104 (28%), Positives = 56/104 (53%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+ + + L + Q +G +SV + +E +RCNL E ED Sbjct: 655 QTWDALKRVMRTRFVHSYYARDLLNRLQQLRQGAKSVEECYQELQMGLLRCNLEETEDAA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + +I + LA K +R V+ ++ + Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNITRLFHLACKAKRKVQGQRAS 966 Score = 40.5 bits (82), Expect(8) = 4e-77 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQTHDIQIP 1609 +KC +N + C ++ID +C NL S ++V L L Q P Sbjct: 2987 TKCVINERSCHMIIDGGSCNNLASSEMVEKLALSAKPHQHP 3109 Score = 31.8 bits (63), Expect(8) = 4e-77 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L VD F EFPE+ RV + + W Sbjct: 454 KIKFNIPPFDGKYDPDAYLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVW 615 Score = 24.9 bits (48), Expect(8) = 4e-77 Identities = 6/18 (33%), Positives = 11/18 (61%) Frame = +1 / +2 Query: 1267 CYKCGKEGHISSGCPLRK 1320 C++C GH+ CP ++ Sbjct: 2717 CHRCKGFGHVQHDCPSKR 2770 Score = 64.8 bits (135), Expect(4) = 2e-22 Identities = 26/45 (57%), Positives = 32/45 (71%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ KA+FHSS IRI Sbjct: 4122 RKTSFINLMKVLGALVEPKGITNHSYNPNFVLKAIFHSSSNFIRI 3988 Score = 48.7 bits (100), Expect(4) = 2e-22 Identities = 23/50 (46%), Positives = 30/50 (60%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S++ S GIG YL V+ L L S H+ DPSFFG Sbjct: 3975 LRKSTLENTIEPLNSSSMSSNLGIG**YLMVMLLIALQSTHIRHDPSFFG 3826 Score = 25.8 bits (50), Expect(4) = 2e-22 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -2 / -1 Query: 2219 RTWANTFSNVPLLQQFLHSLLQYIMLF 2139 RTW S P ++QFL+ + + F Sbjct: 3808 RTWTKRLSYEPFIKQFLNLMFNLLGFF 3728 Score = 23.1 bits (44), Expect(4) = 2e-22 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = -2 / -1 Query: 2093 NQVNTILNSFYR*QP 2049 NQ++ +LNS +R QP Sbjct: 3682 NQIDLMLNSMHRWQP 3638 Score = 48.7 bits (100), Expect(3) = 9e-14 Identities = 22/49 (44%), Positives = 30/49 (61%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ WCI +K H PF QP L + FPFI T+L+ Sbjct: 4129 ERTQNLIHQPHESAWCIS*TKRHH*PFIQPKLRFKSYFPFII*LHTNLV 3983 Score = 40.5 bits (82), Expect(3) = 9e-14 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 / -2 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE LP C+ S SNCQGL R + T SH+T Sbjct: 3327 IFLAWYKKEYWFDLP*CIESLSNCQGLPSRILHACMGTTSHST 3199 Score = 40.0 bits (81), Expect(3) = 9e-14 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR I G+++N + TH SIFLW Sbjct: 3955 EHNRATQFIKHVI*PRNRMMISNGNVINSSTINTHTP*SIFLW 3827 Score = 29.9 bits (59), Expect(3) = 0.054 Identities = 13/44 (29%), Positives = 21/44 (47%) Frame = +1 / +2 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S H +PY I W+ K+TK + +LG ++ Sbjct: 3062 EMVEKLALSAKPHQHPYYIQWLNNSGKAKVTKLVHINFALGNYH 3193 Score = 29.9 bits (59), Expect(3) = 0.054 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +1 / +3 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMHQ 2484 MNGK + GC+NG* C L MHQ Sbjct: 4008 MNGK*LLKRSLGCMNG**CLLVQLMHQ 4088 Score = 27.6 bits (54), Expect(3) = 0.054 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +2 / +3 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKMD CV ++ L P I LF M C ++ V CS Sbjct: 3828 QRKMDHGVCVLIVELLITLPLDIIILFLG*MTCLMN*VALLCS 3956 Score = 33.1 bits (66), Expect = 8.9 Identities = 20/57 (35%), Positives = 28/57 (49%) Frame = +2 / +1 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + VV*M S A W CTK+ + +DE Sbjct: 3940 WLYCVLQS*FA*WLPPDSYEVR**MENSF*NEVWVV*MVSDAFWFN*CTKHFHEVDE 4110
>LOC_Os10g20960:12010.t01588:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7631 Score = 91.8 bits (194), Expect(7) = 8e-75 Identities = 36/60 (60%), Positives = 47/60 (78%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWK A K K GL+EW+VMPFGL+NAPSTFM LMN+VL F+ + Sbjct: 4465 KIDLRSGYHQIRMKLGDEWKAAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLCAFIGR 4644 Score = 84.0 bits (177), Expect(7) = 8e-75 Identities = 33/58 (56%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 4147 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCAVP 4320 Score = 73.0 bits (153), Expect(7) = 8e-75 Identities = 29/50 (58%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + I +RYR PIPRLD MLD LS + +F+K+D Sbjct: 4324 LLVPKKDGSWRMCVDCRAIDNIIIRYRHPIPRLDDMLDELSGSLVFSKID 4473 Score = 62.5 bits (130), Expect(7) = 8e-75 Identities = 31/95 (32%), Positives = 54/95 (56%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +GN+ V +Y + +RC L EN+D Sbjct: 2611 QTWDAIKRVMRARFVPSYHARDLLHKLQQLRQGNKYVEEYYQALQTGMLRCGLVENDDAG 2790 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTE 1092 +AR++ GLN IQD L ++ SI++ LA K + Sbjct: 2791 MARFMGGLNREIQDILAYKEYNSINRLFHLACKVK 2895 Score = 55.6 bits (115), Expect(7) = 8e-75 Identities = 20/51 (39%), Positives = 34/51 (66%) Frame = +1 / +2 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ D+V M +LL RP+QFD D+ H GK + YSF++N +++++ P Sbjct: 3644 YHDSINYDVVPMQACSMLLGRPFQFDKDSLHFGKSNQYSFMYNGKKLVLHP 3796 Score = 34.5 bits (69), Expect(7) = 8e-75 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 / +2 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 3518 EIVEKLALSTQPHPQPYYIQWLNSSGKIKVTRLVRVHFAIGSYHDS 3655 Score = 25.8 bits (50), Expect(7) = 8e-75 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = +3 / +2 Query: 189 CCFKWYQS 212 CC KWYQS Sbjct: 812 CCIKWYQS 835 Score = 55.1 bits (114), Expect(2) = 6e-13 Identities = 23/44 (52%), Positives = 28/44 (63%) Frame = -3 / -1 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FI +KVLGA P GMT HS P+ + KA FHSS +RI Sbjct: 4625 KTSFINLMKVLGALVRPKGMTNHSYRPNLVLKAAFHSSPNFMRI 4494 Score = 40.5 bits (82), Expect(2) = 6e-13 Identities = 21/50 (42%), Positives = 26/50 (52%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL ++ L S HM +PSF G Sbjct: 4481 LRKSILENTSEPLNSSSISSSLGIG*RYLIMMLSIALQSTHMRHEPSFLG 4332
>LOC_Os01g29560:12001.t02642:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5888 Score = 90.9 bits (192), Expect(8) = 8e-74 Identities = 35/60 (58%), Positives = 48/60 (80%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +H IR++ D+WKTA K K GL+EW+VMPFG++NAPSTFM LMN+VLR F+ + Sbjct: 3521 KIDLRSGYH*IRMKLGDKWKTAFKTKFGLYEWLVMPFGITNAPSTFMRLMNEVLRAFIGR 3700 Score = 74.8 bits (157), Expect(8) = 8e-74 Identities = 31/58 (53%), Positives = 42/58 (72%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI+ IDLIPGASLPN R +E ++++V+ELL KG++RES SPC +P Sbjct: 3203 LPPIRGIELQIDLIPGASLPNRVPYRTHSEETKEIQRQVQELLDKGYVRESPSPCAIP 3376 Score = 66.1 bits (138), Expect(8) = 8e-74 Identities = 27/50 (54%), Positives = 35/50 (70%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS M + + + IT+RY PIPRLD MLD LS + +F+K+D Sbjct: 3380 LLVPKKDGSWRMSVNCRAINNITIRYPHPIPRLDDMLDELSGSLVFSKID 3529 Score = 59.7 bits (124), Expect(8) = 8e-74 Identities = 21/51 (41%), Positives = 33/51 (64%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ D+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 2707 YHDSINYDVVSMQACSMLLRRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 2859 Score = 59.3 bits (123), Expect(8) = 8e-74 Identities = 33/102 (32%), Positives = 54/102 (52%) Frame = +1 / +2 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T MK ++ RF+P+ + L + Q + N+SV +Y + + C L EN+D Sbjct: 1694 QTWDAMKRFMRSRFVPSYHARDLLHKLQQLRQENKSVEEYYQALQTGMLCCGLVENDDAG 1873 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRK 1113 + R++ GLN IQD L ++ SI + LA K E V+ R+ Sbjct: 1874 MDRFMGGLNREIQDILAYKEYNSIYRLFHLACKAEMEVQGRR 1999 Score = 31.8 bits (63), Expect(8) = 8e-74 Identities = 10/34 (29%), Positives = 18/34 (52%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 HP PY I W+ +K+T+ ++G ++ S Sbjct: 2617 HPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 2718 Score = 30.9 bits (61), Expect(8) = 8e-74 Identities = 8/23 (34%), Positives = 16/23 (69%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLI 1555 +KC + + C+++ID +C NL+ Sbjct: 2510 TKCVIKERSCRMIIDG*SCNNLV 2578 Score = 28.6 bits (56), Expect(8) = 8e-74 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +1 / +2 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRV 720 K+K I F G D + L +D F +FPE+ RV Sbjct: 1493 KIKFTIPCFDGKYDPDAYLTWELAIDQKFACHDFPENKRV 1612 Score = 56.5 bits (117), Expect(3) = 2e-14 Identities = 25/46 (54%), Positives = 30/46 (65%) Frame = -3 / -3 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI* 2381 R+T FI +KVLGA P GMT HS P+ + KAVFH S +RI* Sbjct: 3684 RKTSFINLMKVLGALVIPKGMTNHSYRPNLVLKAVFHLSPNFMRI* 3547 Score = 35.9 bits (72), Expect(3) = 2e-14 Identities = 21/50 (42%), Positives = 25/50 (50%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L M +PSF G Sbjct: 3537 LRKSILENTSEPLNSSSISSSLGIG*GYLIVMLLIALQFTLMRHEPSFLG 3388 Score = 25.4 bits (49), Expect(3) = 2e-14 Identities = 13/52 (25%), Positives = 23/52 (44%) Frame = -2 / -2 Query: 2225 GYRTWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 G T +++PL++ LH L + + + + RN+VN LN Sbjct: 3376 GDSTRTRRLTHIPLVE*LLHLTLNLLCFLRVGPVWYTVWQRGPRNEVNLELN 3221
>LOC_Os10g11794:12010.t00975:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 11550 Score = 78.0 bits (164), Expect(9) = 1e-72 Identities = 29/58 (50%), Positives = 46/58 (79%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V++LL +G++R+S+SPC VP Sbjct: 3017 LPPMRGIEHQIDLIPGASLPNHAAYRTNPEETKEIQRQVQDLLDRGYVRQSLSPCAVP 3190 Score = 71.6 bits (150), Expect(9) = 1e-72 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKD S MC D + + IT+RYR PIPRLD MLD L + +FTK+D Sbjct: 3194 ILVPKKDDSWRMCVDCRAINNITIRYRHPIPRLDDMLDELCGSIIFTKID 3343 Score = 67.0 bits (140), Expect(9) = 1e-72 Identities = 25/35 (71%), Positives = 31/35 (88%) Frame = +3 / +1 Query: 2430 KEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 3412 KFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGR 3516 Score = 58.3 bits (121), Expect(9) = 1e-72 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = +1 / +2 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y +V CD+V M +LL PW+ D D TH G+ + Y+F+ N ++ I+LP Sbjct: 2561 YADSVDCDVVPMQACSLLLGCPWEHDNDATHHGRSNKYTFVHNGKKFILLP 2713 Score = 53.8 bits (111), Expect(9) = 1e-72 Identities = 26/100 (26%), Positives = 53/100 (53%) Frame = +1 / +2 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQV 990 T +++K ++ RF+P + L + +G++SV DY E + RC + E + Sbjct: 1571 TWEELKVAMRDRFVPPSYHRDLRKKLMRLEQGDKSVQDYYGELQKGVRRCGIVEGVKDAI 1750 Query: 991 ARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTR 1110 R+ +GL + IQ+ + ++ S++Q LA+ E+ ++ R Sbjct: 1751 CRFYSGLREEIQNIVDYKEFNSVNQLFRLAMLAEKELQGR 1870 Score = 35.9 bits (72), Expect(9) = 1e-72 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +1 / +2 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KV+ +I +F G+ D+E LD V F PE HRV + + K W Sbjct: 1373 KVRFKIPSFWGNYDVEKYLDWEMTVQQKFNAHLVPEQHRVRQASSEFKDFAIMW 1534 Score = 35.9 bits (72), Expect(9) = 1e-72 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRK 2432 KI ++ +HQIR++ DEWKTA K K Sbjct: 3335 KIDLRSGYHQIRMKLGDEWKTAFKTK 3412 Score = 34.1 bits (68), Expect(9) = 1e-72 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +2 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 2471 HPHPYHIQWLNDSGRAKVTQVCRVLFSIGSY 2563 Score = 30.9 bits (61), Expect(9) = 1e-72 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 / +2 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N +++ID +C+NL+S LV L L T Sbjct: 2372 INNHRARVIIDGGSCKNLLSSDLVKKLGLTT 2464 Score = 41.4 bits (84), Expect(3) = 9e-13 Identities = 18/35 (51%), Positives = 23/35 (65%) Frame = -3 / -2 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVF 2411 +T FIK +KVLGA P G+T HS P+F F +F Sbjct: 3497 KTSFIKRMKVLGALVKPKGITNHSYKPNF*F*KLF 3393 Score = 36.8 bits (74), Expect(3) = 9e-13 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = -1 / -3 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+LI+H + NR +I +++N + TH R I L Sbjct: 3346 QVNLCENYRATQLIKHVV*PRNRMTISDSNIINGSTINTHSPRIILL 3206 Score = 33.6 bits (67), Expect(3) = 9e-13 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -2 / -3 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTIL 2073 T + +P +Q+ L+ L ++ L W S + + CS NQ+N +L Sbjct: 3181 TGTKALTYIPAVQKVLNLPLNFLSLLWVGSISSMVWQ*CSWNQINLML 3038 Score = 35.0 bits (70), Expect(2) = 0.064 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y V D+V M +L +PW F + +H ++Y+F N R++ ++P Sbjct: 8520 YHDTVNFDLVPMQACSLLFGQPWVFANNGSHNFVANTYTFRHNGRKMKLVP 8672 Score = 22.6 bits (43), Expect(2) = 0.064 Identities = 8/32 (25%), Positives = 14/32 (43%) Frame = +1 / +3 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 +P PY I W K+ + S+G ++ Sbjct: 8430 NPQPYYIKWFNSCGKFKVNRIVRINFSIGDYH 8525
>LOC_Os04g17940:12004.t01541:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4963 Score = 97.7 bits (207), Expect(6) = 1e-71 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 1822 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 2001 Score = 82.6 bits (174), Expect(6) = 1e-71 Identities = 32/58 (55%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++++ELL KG++RES+SPC VP Sbjct: 1504 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQMQELLDKGYVRESLSPCSVP 1677 Score = 74.8 bits (157), Expect(6) = 1e-71 Identities = 30/50 (60%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F K+D Sbjct: 1681 LLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFYKID 1830 Score = 64.3 bits (134), Expect(6) = 1e-71 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 1000 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 1152 Score = 40.0 bits (81), Expect(6) = 1e-71 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S K+V L L T Sbjct: 799 TKCVIKERSCRVIIDRGSCNNLASAKMVEKLALST 903 Score = 32.2 bits (64), Expect(6) = 1e-71 Identities = 12/43 (27%), Positives = 20/43 (46%) Frame = +1 / +1 Query: 1570 EPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 883 EKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 1011 Score = 59.3 bits (123), Expect(2) = 4e-15 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -3 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + KAVFHSS +RI Sbjct: 1985 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKAVFHSSPNFMRI 1851 Score = 43.7 bits (89), Expect(2) = 4e-15 Identities = 23/50 (46%), Positives = 27/50 (54%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM +PSF G Sbjct: 1838 LRKSIL*NTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSFLG 1689
>LOC_Os07g18690:12007.t01727:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6001 Score = 92.7 bits (196), Expect(9) = 2e-71 Identities = 34/54 (62%), Positives = 45/54 (83%) Frame = +3 / +1 Query: 2367 KARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFL 2528 ++ +HQIR++ DEWKT K K GL+EW+V+PFGL+NAPSTFM LMN+VLR F+ Sbjct: 3310 RSGYHQIRMKLGDEWKTTFKTKFGLYEWLVLPFGLTNAPSTFMRLMNEVLRPFI 3471 Score = 73.0 bits (153), Expect(9) = 2e-71 Identities = 27/58 (46%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN +P+E ++++V++LL +G++R+++SPC VP Sbjct: 2980 LPPMRGIEHQIDLIPGASLPNRAAY*TNPEETKEIQRQVQDLLDRGYVRQNLSPCAVP 3153 Score = 69.8 bits (146), Expect(9) = 2e-71 Identities = 27/50 (54%), Positives = 34/50 (68%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD LD L + +FT +D Sbjct: 3157 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDKLDELCGSIIFTNID 3306 Score = 60.2 bits (125), Expect(9) = 2e-71 Identities = 22/51 (43%), Positives = 33/51 (64%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y +V CD+V M +LL RPW+ D D TH G+ + Y+F+ N ++I +LP Sbjct: 2491 YADSVDCDVVLMQACSLLLGRPWEHDNDATHHGRSNKYTFVHNGKKITLLP 2643 Score = 36.8 bits (74), Expect(9) = 2e-71 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = +1 / +3 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK +I +FSG D E LD V+ F PE HRV + + K W Sbjct: 1302 KVKFKIPSFSGYYDAEKYLDWEMIVEQKFNAHLVPEQHRVRQASSEFKDFAIMW 1463 Score = 35.9 bits (72), Expect(9) = 2e-71 Identities = 15/64 (23%), Positives = 32/64 (50%) Frame = +1 / +3 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQV 990 T +++K ++ RF+P + L + +G++SV DY E + RC + E + + Sbjct: 1500 TWEELKVAMRDRFVPPSYHRDLRKKLMRLEQGDKSVQDYYGELQKGVRRCGIVEGVEDAI 1679 Query: 991 ARYI 1002 ++ Sbjct: 1680 CHFL 1691 Score = 32.7 bits (65), Expect(9) = 2e-71 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ +T+ C S+G + Sbjct: 2401 HPHPYHIQWLNDSGRANVTQVCRVSFSIGSY 2493 Score = 27.2 bits (53), Expect(9) = 2e-71 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +2 / +1 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + +++ID + NL+S LV L L T Sbjct: 2302 INNRRARVIIDGGSWNNLVSSDLVKKLGLTT 2394 Score = 25.8 bits (50), Expect(9) = 2e-71 Identities = 7/31 (22%), Positives = 16/31 (51%) Frame = +1 / +1 Query: 1219 IPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 +P +++ + +C++C GH+ CP Sbjct: 1990 VPAKSASSVASTGRIQCHRCQGFGHVQKDCP 2082 Score = 51.9 bits (107), Expect(3) = 2e-17 Identities = 23/44 (52%), Positives = 27/44 (61%) Frame = -3 / -3 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLGA P G T HS P+ + K VFHSS I I Sbjct: 3458 KTSFIKRMKVLGALVKPKGNTNHSYKPNLVLKVVFHSSPSFILI 3327 Score = 43.2 bits (88), Expect(3) = 2e-17 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++ S GIG Y VI L L S H+ Q+PSF G Sbjct: 3314 LRKSIFVKIIEPHNSSSLSSNLGIG*RYRIVILLMALQSTHIRQEPSFLG 3165 Score = 33.1 bits (66), Expect(3) = 2e-17 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -2 / -2 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTIL 2073 T + +P +Q+ L+ L ++ L W S + + CS NQ+N +L Sbjct: 3144 TGTKVLTYIPAVQKVLNLPLNFLSLLWVGSIRSTVWQ*CSWNQINLML 3001 Score = 35.0 bits (70), Expect(2) = 2e-04 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = -1 / -2 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ +CE T+LI+ + NR +I +++N + TH R+IFL Sbjct: 3309 QVNICENYRATQLIKLVV*PRNRMTISDSNIINGSTINTHSPRTIFL 3169 Score = 31.3 bits (62), Expect(2) = 2e-04 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -2 / -2 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 +LIH H+ T CI ++K P Q S + FPFI ++L+ Sbjct: 3456 NLIH*AHESTRCISQTKRQY*PLIQTKFSFKSCFPFISKFHSNLV 3322
>LOC_Os07g27070:12007.t02402:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7961 Score = 88.1 bits (186), Expect(8) = 2e-71 Identities = 37/60 (61%), Positives = 47/60 (78%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI + +HQIR++ DE KTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 4363 KIDLHSGYHQIRMKLGDE*KTAFKTKFGLYEWLVMPFGLTNAPSTFMCLMNEVLRPFIGR 4542 Score = 77.6 bits (163), Expect(8) = 2e-71 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR P+PRLDGMLD L + +FTK+D Sbjct: 4222 ILVPKKDGSWQMCVDCRAINNITIRYRHPVPRLDGMLDELCGSIIFTKID 4371 Score = 69.8 bits (146), Expect(8) = 2e-71 Identities = 28/58 (48%), Positives = 43/58 (74%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGA LPN R + +E ++++V++LL G+IR+S+SPC VP Sbjct: 4045 LPPMRGIEHQIDLIPGALLPNRAVYRTNLEETKEIQRQVQDLLDHGYIRQSLSPCAVP 4218 Score = 57.0 bits (118), Expect(8) = 2e-71 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y +V CD+V M +LL R W+ D D TH G+ + Y+F+ N ++I +LP Sbjct: 3556 YVDSVDCDVVSMQA*SLLLGRSWEHDNDATHHGRSNKYTFVHNGKKITLLP 3708 Score = 53.3 bits (110), Expect(8) = 2e-71 Identities = 24/99 (24%), Positives = 53/99 (53%) Frame = +1 / +1 Query: 817 QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQVAR 996 +++K ++ RF+P + L + +G++SV DY E + RC + E + + R Sbjct: 2569 EELKVAMRDRFVPPSYHRDLRKKLMRLEQGDKSVQDYYGELQKGVRRCGIVEGVEDAICR 2748 Query: 997 YINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRK 1113 + +GL + IQ+ + ++ S++Q A+ E+ ++ R+ Sbjct: 2749 FYSGLREEIQNIVDYKEFNSVNQLFQFAMLAEKELQGRE 2865 Score = 33.6 bits (67), Expect(8) = 2e-71 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 HP+PY I W+ K+T+ C S+G + S Sbjct: 3466 HPHPYHI*WLNDSGRAKVTQVCRVLFSIGSYVDS 3567 Score = 32.2 bits (64), Expect(8) = 2e-71 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 / +1 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + +++ID +C NL+S LV L L T Sbjct: 3367 INNRRARVIIDGGSCNNLVSSDLVKKLGLTT 3459 Score = 25.4 bits (49), Expect(8) = 2e-71 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 3100 QCHRCQGFGHVQKDCPSQR 3156 Score = 55.1 bits (114), Expect(2) = 1e-15 Identities = 24/44 (54%), Positives = 29/44 (65%) Frame = -3 / -1 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLGA P G+T HS P+ + KAVFHSS I I Sbjct: 4523 KTSFIKHMKVLGALVKPKGITNHSYKPNLVLKAVFHSSPSFILI 4392 Score = 49.6 bits (102), Expect(2) = 1e-15 Identities = 23/50 (46%), Positives = 29/50 (58%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++PS G G Y VI L L S H+CQ+PSF G Sbjct: 4379 LCKSIFVKIIEPHNSSSMPSNLGTG*RYRIVILLMALQSTHICQEPSFLG 4230 Score = 42.3 bits (86), Expect = 0.015 Identities = 17/47 (36%), Positives = 29/47 (61%) Frame = -1 / -3 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+LI+H + NR +I +++N + TH+ R+IFL Sbjct: 4374 QVNLCENYRTTQLIKHAV*PRNRMTISDSNIINGSTINTHLPRTIFL 4234
>LOC_Os11g22580:12011.t01928:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8101 Score = 97.7 bits (207), Expect(7) = 5e-70 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 5784 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGR 5963 Score = 72.5 bits (152), Expect(7) = 5e-70 Identities = 28/58 (48%), Positives = 44/58 (75%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R + +E ++++V++LL G++R+S+SPC VP Sbjct: 5466 LPPMRGIEHQIDLIPGASLPNRAAYRTNLEETKEIQRQVQDLLDSGYVRQSLSPCVVP 5639 Score = 71.2 bits (149), Expect(7) = 5e-70 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RY PIPRLD MLD L + +FTK+D Sbjct: 5643 ILVPKKDGSWRMCVDCRAINNITIRYCHPIPRLDDMLDELCGSIIFTKID 5792 Score = 57.9 bits (120), Expect(7) = 5e-70 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y +V CD+V M +LL RPW+ D D TH + + Y+F+ N+++I LP Sbjct: 4977 YADSVDCDVVPMQACLLLLGRPWEHDNDATHHDRSNKYTFVHNEKKITFLP 5129 Score = 45.5 bits (93), Expect(7) = 5e-70 Identities = 23/100 (23%), Positives = 51/100 (51%) Frame = +1 / +3 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQV 990 T +++K ++ RF+P + L + +G++SV DY E + RC + E + + Sbjct: 3990 TWEELKVAMRDRFVPPSYHRDLRKKLMRLEQGDKSVQDYYGELQKGVRRCGIVEGVEDAI 4169 Query: 991 ARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTR 1110 + + L + IQ+ + ++ S++Q A+ E+ ++ R Sbjct: 4170 CCFYSCLREEIQNIVDYKEFNSVNQLFRFAMLAEKELQGR 4289 Score = 35.0 bits (70), Expect(7) = 5e-70 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +3 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 4887 HPHPYHIQWLNDSGRAKVTQVCRVSFSIGSY 4979 Score = 31.3 bits (62), Expect(7) = 5e-70 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 / +3 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N +++ID+ +C NL+S LV L L T Sbjct: 4788 INNHRARVIIDAGSCNNLVSSDLVTKLGLTT 4880 Score = 55.1 bits (114), Expect(2) = 1e-13 Identities = 24/44 (54%), Positives = 29/44 (65%) Frame = -3 / -1 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLGA P G+T HS P+ + KAVFHSS I I Sbjct: 5944 KTSFIKRMKVLGALVKPKGITNHSYKPNLVLKAVFHSSPSFILI 5813 Score = 42.8 bits (87), Expect(2) = 1e-13 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++ S GIG Y VI L L S H+ Q+PSF G Sbjct: 5800 LRKSIFVKIIEPHNSSSMSSNLGIG*QYRIVILLMALQSTHIRQEPSFLG 5651 Score = 40.9 bits (83), Expect(2) = 1e-07 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -1 / -3 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+LI+H + NR +I +++N + TH R+IFL Sbjct: 5795 QVNLCENYRTTQLIKHVV*PRNRMTISDSNIINGSTINTHSPRTIFL 5655 Score = 36.8 bits (74), Expect(2) = 1e-07 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -3 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 5942 NLIH*AHESTRCISQTKRHY*PLIQTKFSFESCFPFISKFHSNLVVATTQVNL 5784
>LOC_Os07g24850:12007.t02181:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3420 Score = 97.3 bits (206), Expect(7) = 6e-70 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2220 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMSLMNEVLRPFIGR 2399 Score = 76.2 bits (160), Expect(7) = 6e-70 Identities = 29/58 (50%), Positives = 44/58 (75%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P E ++ +V++L +G++R+S+SPCPVP Sbjct: 1902 LPPMRGIEHQIDLIPGASLPNRAAYRTNPDETKEIQWQVQDL*DRGYVRQSLSPCPVP 2075 Score = 69.8 bits (146), Expect(7) = 6e-70 Identities = 28/50 (56%), Positives = 34/50 (68%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RY PIPRLD MLD L +FTK+D Sbjct: 2079 ILVPKKDGSWRMCVDCRAINNITIRYCHPIPRLDDMLDELCGYIIFTKID 2228 Score = 60.6 bits (126), Expect(7) = 6e-70 Identities = 22/51 (43%), Positives = 33/51 (64%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y +V CD+V M +LL RPW+ D D TH G+ + Y+F+ N ++I +LP Sbjct: 1413 YADSVDCDVVPMQACSLLLGRPWEHDNDATHHGRSNKYTFMHNGKKITLLP 1565 Score = 38.2 bits (77), Expect(7) = 6e-70 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +2 / +3 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N +++ID C+C NL+S LVN L L T Sbjct: 1224 INNCRARVIIDGCSCNNLVSSDLVNKLGLTT 1316 Score = 35.0 bits (70), Expect(7) = 6e-70 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +3 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 1323 HPHPYHIQWLNDSGRAKVTQVCRVSFSIGSY 1415 Score = 26.3 bits (51), Expect(7) = 6e-70 Identities = 7/34 (20%), Positives = 18/34 (52%) Frame = +1 / +3 Query: 1219 IPKQTSGKGKANEGPKCYKCGKEGHISSGCPLRK 1320 +P +++ + +C++C GH+ CP ++ Sbjct: 912 VPAKSASSVTSTGRIQCHRCQGFGHVQKDCPSQR 1013 Score = 56.1 bits (116), Expect(3) = 7e-18 Identities = 24/44 (54%), Positives = 29/44 (65%) Frame = -3 / -3 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLGA P G+T HS P+ + KAVFHSS I I Sbjct: 2380 KTSFIKLMKVLGALVKPKGITNHSYKPNLVLKAVFHSSPSFILI 2249 Score = 43.2 bits (88), Expect(3) = 7e-18 Identities = 17/47 (36%), Positives = 29/47 (61%) Frame = -1 / -2 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE + T+LI+H + NR +I +++N + TH R+IFL Sbjct: 2231 QVNLCENNIATQLIKHVV*PRNRMTISDSNIINGSTINTHSPRTIFL 2091 Score = 30.4 bits (60), Expect(3) = 7e-18 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = -2 / -2 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTIL 2073 T + +P + + L+ L ++ L W S + + CS NQ+N +L Sbjct: 2066 TGTKALTYIPAVLKVLNLPLNFLSLIWVGSISSTVWQ*CSWNQINLML 1923 Score = 41.4 bits (84), Expect = 0.029 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++ S GIG Y VI L L S H+ Q+PSF G Sbjct: 2236 LRKSIFVKII*PHNSSSMSSNLGIG*QYRIVILLMALQSTHIRQEPSFLG 2087 Score = 35.9 bits (72), Expect = 1.3 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -2 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 2378 NLIH*AHESTRCISQTKRHY*PLIQTKFSFKSCFPFISKFHSNLVIATTQVNL 2220
>LOC_Os07g25230:12007.t02219:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2936 Score = 96.4 bits (204), Expect(9) = 8e-70 Identities = 38/60 (63%), Positives = 48/60 (80%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL NAPSTFM LMN+VLR F+ + Sbjct: 2205 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLINAPSTFMRLMNEVLRPFIGR 2384 Score = 68.4 bits (143), Expect(9) = 8e-70 Identities = 27/50 (54%), Positives = 35/50 (70%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC + + + IT+ YR PIPRLD MLD L + +FTK+D Sbjct: 2064 ILVPKKDGSWRMCVNCRAINNITI*YRHPIPRLDDMLDELCGSIIFTKID 2213 Score = 57.9 bits (120), Expect(9) = 8e-70 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y +V CD+V M +LL RPW+ D D +H G+ + Y+F+ N +I +LP Sbjct: 1452 YADSVDCDVVPMQACSLLLGRPWEHDNDASHHGRSNKYAFVHNGTQITLLP 1604 Score = 50.1 bits (103), Expect(9) = 8e-70 Identities = 22/93 (23%), Positives = 48/93 (51%) Frame = +1 / +1 Query: 817 QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQVAR 996 +++K ++ RF+P + L + +G++SV DY E + RC + E + + R Sbjct: 466 EELKVAMRDRFVPPSYHRDLRKKLMRLEQGDKSVQDYYGELQKGVRRCGIVEGVEDAICR 645 Query: 997 YINGLNDAIQDRLMMQQIWSIDQAQALALKTER 1095 + +GL + IQ+ + ++ S++Q + E+ Sbjct: 646 FYSGLREEIQNIVDYKEFNSVNQLFRFVMLAEK 744 Score = 40.0 bits (81), Expect(9) = 8e-70 Identities = 15/40 (37%), Positives = 27/40 (67%) Frame = +3 / +3 Query: 2106 LPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 LPN R + +E ++++V++LL G++R+ +SPC VP Sbjct: 1941 LPNRAAYRTNLEETKEIQRQVQDLLDHGYVRQRLSPCAVP 2060 Score = 37.7 bits (76), Expect(9) = 8e-70 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK +I +FSG D E LD V+ F PE HRV + + K W Sbjct: 262 KVKFKIPSFSGYYDAEKYLDWEMTVEQKFNAHLVPEQHRVRQASSEFKDFAIMW 423 Score = 34.5 bits (69), Expect(9) = 8e-70 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +3 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 1362 HPHPYHIQWLNDSGRAKVTQVCRISFSIGSY 1454 Score = 30.4 bits (60), Expect(9) = 8e-70 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +2 / +3 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + +++ID +C N +S LV L L T Sbjct: 1263 INNRRARVIIDGGSCNNFVSSDLVKKLGLTT 1355 Score = 24.4 bits (47), Expect(9) = 8e-70 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 997 QCHRC*GFGHVQKDCPSQR 1053 Score = 57.4 bits (119), Expect(2) = 7e-14 Identities = 25/44 (56%), Positives = 30/44 (68%) Frame = -3 / -2 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLGA P G+T HS NP+ + KAVFHSS I I Sbjct: 2365 KTSFIKRMKVLGALIKPKGITNHSYNPNLVLKAVFHSSPSFILI 2234 Score = 41.4 bits (84), Expect(2) = 7e-14 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+LI+H I NR +I +++N + TH R+IFL Sbjct: 2216 QVNLCENYRATQLIKHVI*PRNRMTISDSNIINGSTINTHSPRTIFL 2076 Score = 40.0 bits (81), Expect = 0.076 Identities = 21/50 (42%), Positives = 27/50 (54%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++ S GIG Y VI L L H+ Q+PSF G Sbjct: 2221 LRKSIFVKIIEPHNSSSMSSNLGIG*RYQIVILLMALQLTHIRQEPSFLG 2072 Score = 39.6 bits (80), Expect = 0.10 Identities = 20/53 (37%), Positives = 30/53 (56%) Frame = -2 / -1 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P QP S + FPFI ++L+ ++ NL Sbjct: 2363 NLIH*AHESTRCINQTKRHY*PLIQPKFSFKSCFPFISKFHSNLVIATTQVNL 2205
>LOC_Os04g14580:12004.t01277:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10225 Score = 96.4 bits (204), Expect(9) = 1e-69 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+V+R F+ + Sbjct: 4798 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVVRPFIGR 4977 Score = 75.8 bits (159), Expect(9) = 1e-69 Identities = 30/58 (51%), Positives = 44/58 (75%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P E ++Q+VE+LL +G++R+S+SP VP Sbjct: 4480 LPPMRGIEHQIDLIPGASLPNRAAYRTNPDETKEIQQQVEDLLDRGYVRQSLSPYAVP 4653 Score = 74.8 bits (157), Expect(9) = 1e-69 Identities = 29/50 (58%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD L + +FTK+D Sbjct: 4657 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELCGSIIFTKID 4806 Score = 48.7 bits (100), Expect(9) = 1e-69 Identities = 24/98 (24%), Positives = 48/98 (48%) Frame = +1 / +2 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQV 990 T +++K ++ RF+P + L + +G++SV DY E + RC + E + + Sbjct: 2999 TWEELKVAMRNRFVPPSYHRDLRKKLMRLEQGDKSVQDYYGELQKGVRRCGIVEGVEDAI 3178 Query: 991 ARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVR 1104 R+ +GL + IQ+ + ++ S++ L R R Sbjct: 3179 CRFYSGLREEIQNIVDYKEFNSVNSCFGLLCLQRRNYR 3292 Score = 37.7 bits (76), Expect(9) = 1e-69 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = +1 / +2 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK +I +FSG D E LD V+ F PE HRV + + K W Sbjct: 2801 KVKFKIPSFSGYYDAEKYLDWEMTVEQKFNAHLVPEQHRVRQASSEFKDFAIMW 2962 Score = 35.0 bits (70), Expect(9) = 1e-69 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1759 QFDVDTTHKGKESSYSFIWNKRRIIILP 1842 + D D TH G+ + Y+F+ N ++I +LP Sbjct: 4060 EHDNDATHHGRSNKYTFVHNGKKITLLP 4143 Score = 32.7 bits (65), Expect(9) = 1e-69 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +1 / +2 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLG 1683 HP+PY I W+ K+T C S+G Sbjct: 3902 HPHPYHIQWLNDSGRAKVTLVCRVSFSIG 3988 Score = 26.3 bits (51), Expect(9) = 1e-69 Identities = 7/34 (20%), Positives = 18/34 (52%) Frame = +1 / +1 Query: 1219 IPKQTSGKGKANEGPKCYKCGKEGHISSGCPLRK 1320 +P +++ + +C++C GH+ CP ++ Sbjct: 3490 VPAKSASSVASTGRIQCHRCQGFGHVQKDCPSQR 3591 Score = 26.3 bits (51), Expect(9) = 1e-69 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +1 / +2 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPW 1758 Y +V CD+ M +LL RPW Sbjct: 3992 YADSVDCDVDPMQACSLLLGRPW 4060 Score = 54.2 bits (112), Expect(3) = 4e-19 Identities = 24/43 (55%), Positives = 28/43 (65%) Frame = -3 / -3 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 T FIK +KVLGA P G+T HS P+ + KAVFHSS I I Sbjct: 4955 TSFIKRMKVLGALVKPKGITNHSYKPNLVLKAVFHSSPSFILI 4827 Score = 42.8 bits (87), Expect(3) = 4e-19 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++ S GIG Y VI L L S H+ Q+PSF G Sbjct: 4814 LRKSIFVKIIEPHNSSSMSSNLGIG*RYRIVILLMALQSTHIRQEPSFLG 4665 Score = 36.8 bits (74), Expect(3) = 4e-19 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = -2 / -2 Query: 2192 VPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILNSFYR*QPCG 2043 +P +Q+ + LL ++ L W S + + CS NQ+N +L +R Q G Sbjct: 4620 IPAVQKVFNLLLNFLSLIWVGSISSTVWQ*CSWNQINLMLYPSHRRQSWG 4471 Score = 40.5 bits (82), Expect(2) = 3e-07 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = -1 / -2 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+LI+H I NR +I +++N + TH R+IFL Sbjct: 4809 QVNLCENYRATQLIKHVI*PRNRMTISDSNIINGSTIYTHSPRTIFL 4669 Score = 35.9 bits (72), Expect(2) = 3e-07 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -2 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 4956 NLIH*AHESTRCISQTKRHY*PLIQTKFSFKSCFPFISKFHSNLVIATTQVNL 4798
>LOC_Os11g32180:12011.t02815:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6855 Score = 95.5 bits (202), Expect(8) = 4e-69 Identities = 37/60 (61%), Positives = 48/60 (80%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPS FM LMN+VLR F+ + Sbjct: 4155 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSNFMRLMNEVLRPFIGR 4334 Score = 78.5 bits (165), Expect(8) = 4e-69 Identities = 29/58 (50%), Positives = 46/58 (79%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V++LL +G++R+S+SPC VP Sbjct: 3837 LPPMRGIEHQIDLIPGASLPNRAAYRTNPEETKEIQRQVQDLLDRGYVRQSLSPCAVP 4010 Score = 64.3 bits (134), Expect(8) = 4e-69 Identities = 26/50 (52%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L KKDGS MC D + + I +RYR PIPRL MLD L + +FTK+D Sbjct: 4014 ILVSKKDGSWRMCVDCRAINNIIIRYRHPIPRLYDMLDELCGSIIFTKID 4163 Score = 57.9 bits (120), Expect(8) = 4e-69 Identities = 22/50 (44%), Positives = 31/50 (62%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIIL 1839 Y V CD+V M +LL RPW+ D D TH G+ + YSF+ N ++I +L Sbjct: 3348 YADYVDCDVVPMQACSLLLGRPWEHDNDATHHGRSNKYSFLHNGKKITLL 3497 Score = 37.7 bits (76), Expect(8) = 4e-69 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = +1 / +3 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK +I +FSG D E LD V+ F PE HRV + + K W Sbjct: 2160 KVKFKIPSFSGYYDAEKYLDWEMTVEQKFNAHLVPEQHRVRQASSEFKDFAIMW 2321 Score = 35.0 bits (70), Expect(8) = 4e-69 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +3 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 3258 HPHPYHIQWLNDSGRAKVTQVCRVSFSIGSY 3350 Score = 33.1 bits (66), Expect(8) = 4e-69 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 / +3 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + +++ID +C NL+S LV L L T Sbjct: 3159 INNRCARVIIDGGSCNNLVSSDLVKKLGLAT 3251 Score = 25.4 bits (49), Expect(8) = 4e-69 Identities = 8/39 (20%), Positives = 18/39 (46%) Frame = +1 / +3 Query: 1204 KVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCPLRK 1320 K +P +++ + +C+ C GH+ CP ++ Sbjct: 2832 KSSSQVPAKSASSVASTGRIQCHHCQGFGHVQKDCPSQR 2948 Score = 53.8 bits (111), Expect(3) = 2e-17 Identities = 23/44 (52%), Positives = 29/44 (65%) Frame = -3 / -3 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +K+LGA P G+T HS P+ + KAVFHSS I I Sbjct: 4315 KTSFIKRMKLLGALVKPKGITNHSYKPNLVLKAVFHSSPSFILI 4184 Score = 40.9 bits (83), Expect(3) = 2e-17 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -1 / -2 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+LI+H + NR +I +++N + TH R+IFL Sbjct: 4166 QVNLCENYRATQLIKHVV*PRNRMTISDNNIINGSTINTHSPRTIFL 4026 Score = 33.6 bits (67), Expect(3) = 2e-17 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -2 / -2 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTIL 2073 T + +P +Q+ L+ L ++ L W S + + CS NQ+N +L Sbjct: 4001 TGTKALTYIPAVQKVLNLPLNFLSLLWVGSISSTVWQ*CSWNQINLML 3858 Score = 36.8 bits (74), Expect = 0.70 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSF 2241 L KS FV + + S++ GIG Y +I L L S H+ Q+PSF Sbjct: 4171 LRKSIFVKIIEPHNSSSMSYNLGIG*RYRIIILLMALQSTHIRQEPSF 4028 Score = 34.1 bits (68), Expect = 4.7 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -2 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 4313 NLIH*AHEITRCISQTKRHY*PLIQTKFSFKSCFPFISKFHSNLVIATTQVNL 4155
>LOC_Os06g27540:12006.t02459:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4997 Score = 88.1 bits (186), Expect(7) = 8e-69 Identities = 34/60 (56%), Positives = 45/60 (75%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWK K K GL+EW+VMPFGL++ PSTFM LMN VLR F+ + Sbjct: 2224 KIDLRSGYHQIRMKIGDEWKAVFKTKFGLYEWLVMPFGLTSEPSTFMRLMNHVLRTFIGK 2403 Score = 82.2 bits (173), Expect(7) = 8e-69 Identities = 31/58 (53%), Positives = 47/58 (81%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGA+LPN R +P+E + ++++V+ELL KG++RES+SPC VP Sbjct: 1906 LPPLRGIEHQIDLIPGAALPNRAPYRTNPQETNEIQRQVQELLDKGYVRESLSPCVVP 2079 Score = 74.8 bits (157), Expect(7) = 8e-69 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + ITVRYR PIPR+D MLD LS + +F+K+D Sbjct: 2083 ILVPKKDGSWRMCVDCRALNNITVRYRHPIPRIDDMLDELSGSMIFSKID 2232 Score = 62.0 bits (129), Expect(7) = 8e-69 Identities = 22/51 (43%), Positives = 30/51 (58%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y VLCD+V M H+LL RPWQFD + H G+ + +S W R ++ P Sbjct: 1405 YEDEVLCDVVPMTVCHLLLGRPWQFDRSSRHCGRTNQFSIKWKGRNFVLKP 1557 Score = 37.7 bits (76), Expect(7) = 8e-69 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQ 1588 ++ V GKVCK+++D +C NL S+ + + L L+ Sbjct: 1204 TRAKVGGKVCKVIVDGGSCHNLASKDMCDKLGLK 1305 Score = 30.4 bits (60), Expect(7) = 8e-69 Identities = 9/26 (34%), Positives = 14/26 (53%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRKFVNTTIH 1341 +C+KCG GH+ CP + + H Sbjct: 946 QCFKCGGRGHVVRECPNNRAIIVIEH 1023 Score = 27.6 bits (54), Expect(7) = 8e-69 Identities = 8/31 (25%), Positives = 17/31 (54%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY + W+ ++KI + +G++ Sbjct: 1315 HPHPYHVQWLNDSGDIKIGHRVKVSFKIGEY 1407 Score = 48.7 bits (100), Expect(2) = 5e-11 Identities = 24/50 (48%), Positives = 30/50 (60%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L+KS N + L+ S+I S G+G Y TVI L L S H+ QDPSF G Sbjct: 2240 LLKSILENIIEPLNSSSISSILGMGWRYRTVILLRALQSTHILQDPSFLG 2091 Score = 40.5 bits (82), Expect(2) = 5e-11 Identities = 17/49 (34%), Positives = 27/49 (55%) Frame = -2 / -3 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E S++++HQ H+ TW ++K H+ PF + FPFI + LM Sbjct: 2394 ECSQNMVHQSHESTWFTSQTKRHN*PFI*TEFCFKNSFPFISNFHSYLM 2248 Score = 54.2 bits (112), Expect(2) = 6e-11 Identities = 28/63 (44%), Positives = 36/63 (57%) Frame = -3 / -1 Query: 2524 NCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI**NLAL*TILPH* 2345 N +T FI +KVLG+ P G+T HS P+F+ K FHSS I I** L +IL + Sbjct: 2393 NVLKTWFINLMKVLGSLVKPKGITNHSYKPNFVLKTAFHSSPIFILI**YPLLKSILENI 2214 Query: 2344 ANP 2336 P Sbjct: 2213 IEP 2205 Score = 34.5 bits (69), Expect(2) = 6e-11 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = -1 / -3 Query: 2349 TKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 T+LI+H I N +I D++ + TH RSIFL Sbjct: 2205 TQLIKHIIYPWNGMAISNSDIIEGSTINTHPPRSIFL 2095
>LOC_Os06g25180:12006.t02326:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4714 Score = 97.7 bits (207), Expect(8) = 5e-68 Identities = 38/58 (65%), Positives = 48/58 (82%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFL 2528 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ Sbjct: 2261 KIELRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFI 2434 Score = 70.7 bits (148), Expect(8) = 5e-68 Identities = 27/50 (54%), Positives = 35/50 (70%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RY PIPRLD MLD L + +FTK++ Sbjct: 2120 ILVPKKDGSWRMCVDCRAINNITIRYHHPIPRLDDMLDELCGSIIFTKIE 2269 Score = 70.3 bits (147), Expect(8) = 5e-68 Identities = 27/57 (47%), Positives = 43/57 (75%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPV 2222 L P++GI++ IDLIP ASLPN R +P+E ++++V++LL +G +R+S+SPC V Sbjct: 1943 LPPMRGIEHQIDLIPRASLPNRAAYRTNPEETKEIQRQVQDLLDRGDVRQSLSPCAV 2113 Score = 55.6 bits (115), Expect(8) = 5e-68 Identities = 21/51 (41%), Positives = 31/51 (60%) Frame = +1 / +2 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y +V CD+V M +LL RPW+ D D TH + + Y+F+ N +I +LP Sbjct: 1454 YADSVDCDVVPMQPCSLLLGRPWEHDNDATHHCRSNKYTFVHNGNQITLLP 1606 Score = 39.1 bits (79), Expect(8) = 5e-68 Identities = 21/54 (38%), Positives = 26/54 (48%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK +I +FSG D E LD V+ F PE HRV + + K V W Sbjct: 262 KVKFKIPSFSGYYDAEKYLDWEMIVEQKFNAHLVPEQHRVRQASSEFKDVAIMW 423 Score = 31.3 bits (62), Expect(8) = 5e-68 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = +1 / +2 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSL 1680 HP+PY I W+ K+T+ C S+ Sbjct: 1364 HPHPYHIQWLNDSGRAKVTQVCRVSFSI 1447 Score = 29.9 bits (59), Expect(8) = 5e-68 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +2 / +2 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + +++ID +C NL+ LV L L T Sbjct: 1265 INNRRARVIIDGGSCNNLVCSDLVKKLGLTT 1357 Score = 24.9 bits (48), Expect(8) = 5e-68 Identities = 6/18 (33%), Positives = 11/18 (61%) Frame = +1 / +1 Query: 1267 CYKCGKEGHISSGCPLRK 1320 C++C GH+ CP ++ Sbjct: 1000 CHRCQGFGHVQKDCPSQR 1053 Score = 55.1 bits (114), Expect(3) = 2e-17 Identities = 24/44 (54%), Positives = 29/44 (65%) Frame = -3 / -2 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLGA P G+T HS P+ + KAVFHSS I I Sbjct: 2421 KTSFIKRMKVLGALVKPKGITNHSYKPNLVLKAVFHSSPSFILI 2290 Score = 39.6 bits (80), Expect(3) = 2e-17 Identities = 21/50 (42%), Positives = 27/50 (54%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L S FV + + S++ S GIG Y VI L L S H+ Q+PSF G Sbjct: 2277 LRNSIFVKIIEPHNSSSMSSNLGIG**YRIVILLMALQSTHIRQEPSFLG 2128 Score = 33.6 bits (67), Expect(3) = 2e-17 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -2 / -1 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTIL 2073 T + +P +Q+ L+ L ++ L W S + + CS NQ+N +L Sbjct: 2107 TGTKALTYIPAVQKVLNLPLNFLSLLWVGSISSTVWQ*CSWNQINLML 1964 Score = 39.6 bits (80), Expect(2) = 5e-07 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = -1 / -1 Query: 2370 LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 LCE T+LI+H + NR I +++N + TH R+IFL Sbjct: 2263 LCENYRATQLIKHVV*PRNRMMISDSNIINGSTINTHSPRTIFL 2132 Score = 35.9 bits (72), Expect(2) = 5e-07 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -1 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 2419 NLIH*AHESTRCISQTKRHY*PLIQTKFSFKSCFPFISKFHSNLVIATTQFNL 2261
>LOC_Os03g23080:12003.t02055:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5084 Score = 92.3 bits (195), Expect(7) = 1e-67 Identities = 36/58 (62%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFL 2528 KI ++ +HQIR++ DEWKT K K GL+EW+VMP GL+NAPSTFM LMN+VLR F+ Sbjct: 2329 KIDLRSGYHQIRLKLGDEWKTVFKTKFGLYEWLVMPCGLTNAPSTFMRLMNEVLRPFI 2502 Score = 74.8 bits (157), Expect(7) = 1e-67 Identities = 29/50 (58%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD L + +FTK+D Sbjct: 2188 ILVPKKDGSWRMCVDCRAINSITIRYRHPIPRLDDMLDELCGSIIFTKID 2337 Score = 70.3 bits (147), Expect(7) = 1e-67 Identities = 27/58 (46%), Positives = 44/58 (75%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ I LIPGASLPN R +P++ ++++V++LL G++R+S+SPC VP Sbjct: 2011 LPPMRGIEHQIVLIPGASLPNNVAYRTNPEKTKEIQRQVQDLLDHGYVRQSLSPCAVP 2184 Score = 52.8 bits (109), Expect(7) = 1e-67 Identities = 19/51 (37%), Positives = 30/51 (58%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL PW+ D D TH G+ + Y F+ ++I +LP Sbjct: 1522 YAYSIDCDVVLMQAYSLLLGHPWEHDNDATHHGRSNKYIFVHKGKKITLLP 1674 Score = 38.6 bits (78), Expect(7) = 1e-67 Identities = 21/54 (38%), Positives = 26/54 (48%) Frame = +1 / +3 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK +I +FSG D E LD V+ F V PE HRV + + K W Sbjct: 327 KVKFKIPSFSGYYDAEKYLDWEMIVEQKFNVHLVPEQHRVRQASSEFKDFAIMW 488 Score = 36.3 bits (73), Expect(7) = 1e-67 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ V KIT+ C S+ + Sbjct: 1432 HPHPYHIQWLNDSVRAKITQVCRDSFSISSY 1524 Score = 34.1 bits (68), Expect(7) = 1e-67 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 / +1 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQTH 1594 +N + +++ID C+ NL+S LV L L T+ Sbjct: 1333 INNRRARMIIDGCSYNNLVSSDLVRKLGLTTY 1428 Score = 55.6 bits (115), Expect(2) = 9e-14 Identities = 23/38 (60%), Positives = 27/38 (71%) Frame = -3 / -1 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSS 2402 RT FIK +KVLGA P G+T HS NP+ + K VFHSS Sbjct: 2489 RTSFIKRMKVLGALVKPQGITNHSYNPNLVLKTVFHSS 2376 Score = 42.8 bits (87), Expect(2) = 9e-14 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++ S GIG Y VI L L S H+ Q+PSF G Sbjct: 2345 LRKSIFVKIIEPHNSSSMSSNLGIG*RYRIVILLMALQSTHIRQEPSFLG 2196 Score = 40.0 bits (81), Expect(2) = 9e-07 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = -1 / -3 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+LI+H + NR +I + +N + TH R+IFL Sbjct: 2340 QVNLCENYRTTQLIKHVV*PRNRMTISNSNTINGSTINTHSPRTIFL 2200 Score = 34.5 bits (69), Expect(2) = 9e-07 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = -2 / -3 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++ H P Q S + FPFI ++L+ ++ NL Sbjct: 2487 NLIH*AHESTRCISQTTRHY*PLIQSKFSFENCFPFIAKFQSNLVVATSQVNL 2329
>LOC_Os02g23821:12002.t02071:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4425 Score = 97.7 bits (207), Expect(5) = 1e-67 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 1039 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 1218 Score = 84.0 bits (177), Expect(5) = 1e-67 Identities = 33/58 (56%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 721 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVP 894 Score = 76.2 bits (160), Expect(5) = 1e-67 Identities = 30/50 (60%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 898 LLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKID 1047 Score = 64.3 bits (134), Expect(5) = 1e-67 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 217 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 369 Score = 33.6 bits (67), Expect(5) = 1e-67 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 91 EMVEKLALSTQPHPQPYYIQWLNSSDKVKVTRLVRVHFAIGSYHDS 228 Score = 59.3 bits (123), Expect(2) = 2e-15 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + KAVFHSS +RI Sbjct: 1202 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKAVFHSSPNFMRI 1068 Score = 44.6 bits (91), Expect(2) = 2e-15 Identities = 23/50 (46%), Positives = 27/50 (54%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM +PSF G Sbjct: 1055 LRKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSFLG 906 Score = 31.8 bits (63), Expect(2) = 1.8 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 / +3 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R +*+ SHA+W+ CT+Y + ++E Sbjct: 1089 *MENSF*N*IRPI*VVSHALWSH*CTQYFHEINE 1190 Score = 27.6 bits (54), Expect(2) = 1.8 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +2 / +1 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 ++G ++ID +C NL S ++V L L T Sbjct: 28 IDGVDVLIIIDGGSCNNLASAEMVEKLALST 120
>LOC_Os05g22490:12005.t01910:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10989 Score = 74.8 bits (157), Expect(9) = 2e-66 Identities = 29/50 (58%), Positives = 36/50 (72%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD L + +FTK+D Sbjct: 4985 ILVPKKDGSWQMCVDCRAINNITIRYRHPIPRLDDMLDELCGSIIFTKID 5134 Score = 73.0 bits (153), Expect(9) = 2e-66 Identities = 28/58 (48%), Positives = 44/58 (75%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI + IDLIPGASL N R +P+E ++++V++LL +G++R+S+SPC VP Sbjct: 4808 LPPMRGIAHQIDLIPGASLSNRAAYRTNPEETKEIQRQVQDLLDRGYVRQSLSPCVVP 4981 Score = 65.2 bits (136), Expect(9) = 2e-66 Identities = 25/38 (65%), Positives = 32/38 (84%) Frame = +3 / +1 Query: 2421 LKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 ++ K GL+EW+VMP GL+NAPSTFM LMNQVLR F+ + Sbjct: 5179 METKFGLYEWLVMPLGLTNAPSTFMCLMNQVLRPFIGR 5292 Score = 61.6 bits (128), Expect(9) = 2e-66 Identities = 22/51 (43%), Positives = 33/51 (64%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y +V CD+V M +LL PW+ D D TH G+ + Y+F+ N ++II+LP Sbjct: 4329 YADSVDCDVVPMQACSLLLGHPWEHDNDATHHGRSNKYTFVHNGKKIILLP 4481 Score = 39.6 bits (80), Expect(9) = 2e-66 Identities = 20/54 (37%), Positives = 26/54 (48%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK +I +FSG D E LD V+ F PE HRV +++ K W Sbjct: 3154 KVKFKIPSFSGYYDAEKYLDWEMTVEQKFNAHLVPEQHRVRQASHEFKDFAIMW 3315 Score = 36.8 bits (74), Expect(9) = 2e-66 Identities = 16/67 (23%), Positives = 33/67 (49%) Frame = +1 / +1 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQV 990 T +++K ++ RF+P + L + +G++SV DY E + RC + E + + Sbjct: 3352 TGEELKVAMRDRFVPPSYHRDLRKKLMRLEQGDKSVQDYYGELKKGVRRCGIVEGVEDAI 3531 Query: 991 ARYINGL 1011 + + L Sbjct: 3532 CHFYSSL 3552 Score = 34.5 bits (69), Expect(9) = 2e-66 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +3 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 4239 HPHPYHIQWLNDSGRAKVTQFCRVSFSIGSY 4331 Score = 32.2 bits (64), Expect(9) = 2e-66 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 / +3 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + +++ID +C NL+S LV L L T Sbjct: 4140 INNRRARVIIDGGSCNNLVSSDLVKKLGLTT 4232 Score = 25.8 bits (50), Expect(9) = 2e-66 Identities = 7/34 (20%), Positives = 18/34 (52%) Frame = +1 / +3 Query: 1219 IPKQTSGKGKANEGPKCYKCGKEGHISSGCPLRK 1320 +P +++ + +C++C GH+ CP ++ Sbjct: 3828 VPAKSASSIASTGRIQCHRCQGFGHVQKDCPSQR 3929 Score = 48.3 bits (99), Expect(4) = 4e-15 Identities = 23/50 (46%), Positives = 29/50 (58%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++ S GIG Y VI L L S H+CQ+PSF G Sbjct: 5142 LRKSIFVKIIEPHNSSSMSSNLGIG*RYRIVILLMALQSTHICQEPSFLG 4993 Score = 39.6 bits (80), Expect(4) = 4e-15 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = -3 / -2 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFL 2426 +T*FIK +KVLGA P G+T HS P+ + Sbjct: 5273 KT*FIKHMKVLGALVKPKGITNHSYKPNLV 5184 Score = 26.7 bits (52), Expect(4) = 4e-15 Identities = 11/45 (24%), Positives = 22/45 (48%) Frame = -2 / -3 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVN 2082 T + +P +Q+ L+ L ++ L W S + + C +Q+N Sbjct: 4972 TGTKALTYIPAVQKVLNLPLNFLSLLWVGSISSTV*Q*CPWDQIN 4838 Score = 22.1 bits (42), Expect(4) = 4e-15 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -3 / -1 Query: 2101 APGIKSILY*IPFIG 2057 APGIKSI IP +G Sbjct: 4857 APGIKSI*CAIPLMG 4813 Score = 42.3 bits (86), Expect(2) = 4e-04 Identities = 17/47 (36%), Positives = 29/47 (61%) Frame = -1 / -3 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+LI+H + NR +I +++N + TH+ R+IFL Sbjct: 5137 QVNLCENYRATQLIKHVV*PRNRMTISDSNIINGSTINTHLPRTIFL 4997 Score = 23.1 bits (44), Expect(2) = 4e-04 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = -3 / -3 Query: 2458 MTTHSNNPSFLFKAVFHSS 2402 +TTH+N F F + FHS+ Sbjct: 5212 LTTHTNQI*FPFISKFHSN 5156
>LOC_Os07g20880:12007.t01891:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7228 Score = 93.6 bits (198), Expect(8) = 3e-66 Identities = 37/60 (61%), Positives = 47/60 (78%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI + +HQIR++ DEWKTA K K L+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 4671 KIDLHSGYHQIRMKLGDEWKTAFKTKFSLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGR 4850 Score = 73.5 bits (154), Expect(8) = 3e-66 Identities = 28/58 (48%), Positives = 44/58 (75%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASL N R +P+E ++++V++LL +G+IR+S+ PC VP Sbjct: 4353 LPPMRGIEHQIDLIPGASLQNRAAYRTNPEETKEIQRQVQDLLDRGYIRQSLGPCTVP 4526 Score = 67.0 bits (140), Expect(8) = 3e-66 Identities = 27/50 (54%), Positives = 34/50 (68%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+ YR PI RLD MLD L + +FTK+D Sbjct: 4530 ILVPKKDGSWRMCVDCRAINNITI*YRHPISRLDDMLDELCGSIIFTKID 4679 Score = 56.1 bits (116), Expect(8) = 3e-66 Identities = 21/51 (41%), Positives = 31/51 (60%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y V CD+V M +LL PW+ D D TH G+ + Y+F+ N ++I +LP Sbjct: 3864 YADFVDCDVVPMQACSLLLGCPWEHDNDATHHGRRNKYTFVHNGKKITLLP 4016 Score = 37.3 bits (75), Expect(8) = 3e-66 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = +1 / +2 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK +I +FSG D E LD V+ F PE HRV + + K W Sbjct: 2678 KVKFKIPSFSGYYDAEKYLDWEMTVEQKFNAYLVPEQHRV*QASSEFKDFAIMW 2839 Score = 32.7 bits (65), Expect(8) = 3e-66 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = +1 / +3 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ +T+ C S+G + Sbjct: 3774 HPHPYHIQWLNDSGRANVTQVCRVSFSIGSY 3866 Score = 32.2 bits (64), Expect(8) = 3e-66 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 / +3 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + +++ID +C NL+S LV L L T Sbjct: 3675 INNRRARVIIDGGSCNNLVSSDLVKKLGLTT 3767 Score = 25.4 bits (49), Expect(8) = 3e-66 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +3 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 3408 QCHRCQGFGHVQKDCPSQR 3464 Score = 50.6 bits (104), Expect(3) = 2e-17 Identities = 23/44 (52%), Positives = 28/44 (63%) Frame = -3 / -1 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLGA P G+T HS + + KAVFHSS I I Sbjct: 4831 KTSFIKRMKVLGALVKPKGITNHSYKLNLVLKAVFHSSPSFILI 4700 Score = 40.9 bits (83), Expect(3) = 2e-17 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -1 / -3 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+LI+H + NR +I +++N + TH R+IFL Sbjct: 4682 QVNLCENYRTTQLIKHVV*PRNRMTISDSNIINGSTINTHSPRTIFL 4542 Score = 36.8 bits (74), Expect(3) = 2e-17 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -2 / -3 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILNSFYR*QPCG 2043 T + +P +Q+ L+ L ++ L W S I + CS NQ+N +L +R Q G Sbjct: 4517 TRTKALTYIPAVQKILNLPLNFLSLLWVGSISSTILQ*CSWNQINLMLYPSHRWQSRG 4344 Score = 37.7 bits (76), Expect = 0.37 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -3 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 4829 NLIH*AHESTRCISQTKRHY*PLIQTKFSFESCFPFISKFHSNLVVATMQVNL 4671
>LOC_Os01g30980:12001.t02682:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5614 Score = 95.9 bits (203), Expect(6) = 4e-64 Identities = 37/60 (61%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKT K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2914 KIDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGR 3093 Score = 74.8 bits (157), Expect(6) = 4e-64 Identities = 29/50 (58%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD L + +FTK+D Sbjct: 2773 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELCGSIIFTKID 2922 Score = 70.7 bits (148), Expect(6) = 4e-64 Identities = 27/58 (46%), Positives = 43/58 (74%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++ I++ IDLIPGASLPN R +P+ +++ V++LL +G++R+S+SPC VP Sbjct: 2596 LPPMREIEHQIDLIPGASLPNRVAYRTNPEGTKEIQRHVQDLLDRGYVRQSLSPCAVP 2769 Score = 64.3 bits (134), Expect(6) = 4e-64 Identities = 23/51 (45%), Positives = 33/51 (64%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y +V CD+V M +LL RPW+ D D TH G+ + YSF+ N ++I +LP Sbjct: 2107 YADSVDCDVVPMQACSLLLARPWEHDNDATHHGRSNKYSFVHNGKKITLLP 2259 Score = 35.0 bits (70), Expect(6) = 4e-64 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 2017 HPHPYHIQWLNDSGGAKVTQVCRVSFSIGSY 2109 Score = 26.3 bits (51), Expect(6) = 4e-64 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +2 / +1 Query: 1520 LVIDSCNCENLISQKLVNHLKLQT 1591 ++ID +C NL+S LV L L T Sbjct: 1939 VIIDGGSCNNLVSFDLVKKLGLTT 2010 Score = 53.3 bits (110), Expect(2) = 4e-13 Identities = 23/44 (52%), Positives = 28/44 (63%) Frame = -3 / -3 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLGA P G+T HS P+ + K VFHSS I I Sbjct: 3074 KTSFIKRMKVLGALVKPKGITNHSYKPNLVLKVVFHSSPSFILI 2943 Score = 42.8 bits (87), Expect(2) = 4e-13 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++ S GIG Y VI L L S H+ Q+PSF G Sbjct: 2930 LRKSIFVKIIEPHNSSSMSSNLGIG*RYRIVILLMALQSTHIRQEPSFLG 2781 Score = 41.4 bits (84), Expect(2) = 1e-07 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = -1 / -2 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+LI+H I NR +I +++N + TH R+IFL Sbjct: 2925 QVNLCENYRATQLIKHVI*PRNRMTISDSNIINGSTINTHSPRTIFL 2785 Score = 35.9 bits (72), Expect(2) = 1e-07 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -2 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 3072 NLIH*AHESTRCISQTKRHY*PLIQTKFSFKSCFPFISKFHSNLVIATTQVNL 2914
>LOC_Os04g13960:12004.t01216:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6075 Score = 95.0 bits (201), Expect(6) = 5e-64 Identities = 37/60 (61%), Positives = 48/60 (80%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPST M LMN+VLR F+ + Sbjct: 3207 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTLMRLMNEVLRPFIGR 3386 Score = 77.6 bits (163), Expect(6) = 5e-64 Identities = 29/58 (50%), Positives = 45/58 (77%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P E ++++V++LL +G++R+S+SPC VP Sbjct: 2889 LPPMRGIEHQIDLIPGASLPNRAAYRTNPDETKEIQRQVQDLLDRGYVRQSLSPCAVP 3062 Score = 73.5 bits (154), Expect(6) = 5e-64 Identities = 30/50 (60%), Positives = 36/50 (72%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + ITVRYR PIPRLD MLD L + +FTK+D Sbjct: 3066 ILVPKKDGSW*MCVDCRAINNITVRYRHPIPRLDDMLDELCGSIIFTKID 3215 Score = 58.3 bits (121), Expect(6) = 5e-64 Identities = 22/51 (43%), Positives = 31/51 (60%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y V CD+V M LL RPW+ D D TH G+ + Y+F+ N ++I +LP Sbjct: 2400 YADFVDCDVVPMKACSFLLGRPWEHDNDATHHGRSNKYTFVHNGKKITLLP 2552 Score = 32.2 bits (64), Expect(6) = 5e-64 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 / +3 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + +++ID +C NL+S LV L L T Sbjct: 2211 INNRRARVIIDGGSCNNLVSSDLVKKLGLTT 2303 Score = 30.4 bits (60), Expect(6) = 5e-64 Identities = 10/31 (32%), Positives = 15/31 (48%) Frame = +1 / +3 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K + C S+G + Sbjct: 2310 HPHPYHIQWLNDSGRAKAIQVCRVSFSIGSY 2402 Score = 56.5 bits (117), Expect(3) = 9e-20 Identities = 25/44 (56%), Positives = 29/44 (65%) Frame = -3 / -3 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK IKVLGA P G+T HS P+ + KAVFHSS I I Sbjct: 3367 KTSFIKRIKVLGALVKPKGITNHSYKPNLVLKAVFHSSPSFILI 3236 Score = 46.0 bits (94), Expect(3) = 9e-20 Identities = 18/47 (38%), Positives = 30/47 (63%) Frame = -1 / -2 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE + T+LI+H + GNR +I +++N + TH R+IFL Sbjct: 3218 QVNLCENNRATQLIKHVV*PGNRMTISDSNIINGSTINTHSPRTIFL 3078 Score = 33.6 bits (67), Expect(3) = 9e-20 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -2 / -2 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTIL 2073 T + +P +Q+ L+ L ++ L W S + + CS NQ+N +L Sbjct: 3053 TGTKALTYIPAVQKVLNLPLNFLSLIWVGSISSTVWQ*CSWNQINLML 2910 Score = 45.5 bits (93), Expect = 0.002 Identities = 23/50 (46%), Positives = 29/50 (58%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++ S GIG Y TVI L L S H+ Q+PSF G Sbjct: 3223 LRKSIFVKIIEPHNSSSMSSNLGIG*RYRTVILLMALQSTHIHQEPSFLG 3074 Score = 33.6 bits (67), Expect = 6.4 Identities = 19/53 (35%), Positives = 28/53 (52%) Frame = -2 / -2 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 3365 NLIH*AH*STRCISQTKRHY*PLIQTKFSFKSCFPFISKFHSNLVIATTQVNL 3207
>LOC_Os04g24370:12004.t02150:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7383 Score = 95.0 bits (201), Expect(8) = 2e-63 Identities = 36/60 (60%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR+ DEWKTA K K GL+EW+VMPFGL+NAP+TFM LMN+VLR F+ + Sbjct: 2383 KVDLRSGYHQIRMNLGDEWKTAFKTKFGLYEWLVMPFGLTNAPTTFMRLMNEVLRPFIGK 2562 Score = 79.4 bits (167), Expect(8) = 2e-63 Identities = 31/57 (54%), Positives = 44/57 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPV 2222 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC V Sbjct: 2065 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAV 2235 Score = 62.5 bits (130), Expect(8) = 2e-63 Identities = 33/104 (31%), Positives = 57/104 (54%) Frame = +1 / +1 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q +G +SV +Y E +RCNL E ED Sbjct: 655 QTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYY*ELQMGLLRCNLEETEDTA 834 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN I D + + ++ + LA K ER V+ R+ + Sbjct: 835 MARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRAS 966 Score = 48.7 bits (100), Expect(8) = 2e-63 Identities = 18/36 (50%), Positives = 24/36 (66%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKE 1794 +Y V CD+V M ++LL RPWQFD D+ H GK+ Sbjct: 1642 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGKK 1749 Score = 40.5 bits (82), Expect(8) = 2e-63 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 1444 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 1548 Score = 31.8 bits (63), Expect(8) = 2e-63 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE RV + + W Sbjct: 454 KIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPESTRVRAATSEFTDFASVW 615 Score = 25.4 bits (49), Expect(8) = 2e-63 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +1 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 1171 QCHRCKGFGHVQRDCPSKR 1227 Score = 24.9 bits (48), Expect(8) = 2e-63 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDCS 2365 QRKM CV ++ L P I LF M+C ++ V CS Sbjct: 2252 QRKMVHGVCVLIVELLITLPFDIVILFLG*MICLMN*VALLCS 2380 Score = 60.2 bits (125), Expect(3) = 5e-17 Identities = 25/45 (55%), Positives = 31/45 (68%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KV+GA P G+T HS NP+F+ AVFHSS IRI Sbjct: 2546 RKTSFINLMKVVGALVKPKGITNHSYNPNFVLNAVFHSSPKFIRI 2412 Score = 46.4 bits (95), Expect(3) = 5e-17 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 2399 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 2250 Score = 34.1 bits (68), Expect(3) = 5e-17 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -2 / -2 Query: 1790 LPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 LP C+ S SNC GL R + T SH+T Sbjct: 1745 LP*CIESLSNCHGLPSRILHACMGTTSHST 1656 Score = 74.8 bits (157), Expect(3) = 5e-15 Identities = 31/61 (50%), Positives = 39/61 (63%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLDFIKSVSDPGM 2406 +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D M Sbjct: 2242 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRM 2421 Query: 2407 N 2409 N Sbjct: 2422 N 2424 Score = 33.6 bits (67), Expect(3) = 5e-15 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ K+TK + ++G ++ Sbjct: 1519 EMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYH 1650 Score = 25.4 bits (49), Expect(3) = 5e-15 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +2 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK + GC++G* C L MH Sbjct: 2432 MNGKQHLKRSLGCMSG**CLLV*LMH 2509 Score = 39.1 bits (79), Expect(2) = 1e-07 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 2379 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 2251 Score = 38.6 bits (78), Expect(2) = 1e-07 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 2553 ERTQNLIHQPHESGGCIS*TKRHH*PLIQPKLRFKCCFPFIT*VHTNLV 2407
>LOC_Os01g31020:12001.t02686:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 12465 Score = 92.7 bits (196), Expect(8) = 7e-62 Identities = 36/60 (60%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKT+ K K GL+EW+VM FGL+NAPSTFM LMN+VLR F+ + Sbjct: 3940 KIDLRSGYHQIRMKLGDEWKTSFKTKFGLYEWLVMTFGLTNAPSTFMRLMNEVLRPFIGR 4119 Score = 75.3 bits (158), Expect(8) = 7e-62 Identities = 30/54 (55%), Positives = 38/54 (70%) Frame = +1 / +1 Query: 2215 VLYPLLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 V+ +L PKKD S* MC D + + IT+RYR PIPRLD MLD L + +FTK+D Sbjct: 3787 VVLVILVPKKDSS*RMCVDCRAINNITIRYRHPIPRLDDMLDELCGSIIFTKID 3948 Score = 62.9 bits (131), Expect(8) = 7e-62 Identities = 26/57 (45%), Positives = 42/57 (73%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPV 2222 L P++GI + I+LIPGASLPN R +P+E ++++V++LL +G++ S+SPC V Sbjct: 3622 LPPMRGI*HQINLIPGASLPNRAAYRTNPEETKGIQRQVQDLLDRGYVC*SLSPCVV 3792 Score = 48.7 bits (100), Expect(8) = 7e-62 Identities = 25/100 (25%), Positives = 52/100 (52%) Frame = +1 / +2 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQV 990 T +++K + RF+P + L + +G++SV DY E + RC + E + + Sbjct: 2168 TWEELKVAMHDRFVPPSYHRDLRKKLMRLEQGDKSVQDYYGELQKGVRRCGIVEGVEDAI 2347 Query: 991 ARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTR 1110 R+ +GL + IQ+ + ++ S++Q A+ E+ ++ R Sbjct: 2348 FRFYSGLREEIQNIVDYKEFNSMNQLFWFAMLEEKELQGR 2467 Score = 34.5 bits (69), Expect(8) = 7e-62 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = +1 / +2 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLK 744 KVK +I +FSG D E LD ++ F PE HRV + + K Sbjct: 1970 KVKFKIPSFSGYYDAEKYLDWEMAIEQKFNAHLVPEQHRVKQASSEFK 2113 Score = 33.6 bits (67), Expect(8) = 7e-62 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +2 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 3068 HPHPYHIQWLNDFGRAKVTQVCRVSFSIGSY 3160 Score = 32.2 bits (64), Expect(8) = 7e-62 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 / +2 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + +++ID +C NL+S LV L L T Sbjct: 2969 INNRRARVIIDGGSCNNLVSSDLVKKLGLTT 3061 Score = 28.1 bits (55), Expect(8) = 7e-62 Identities = 7/34 (20%), Positives = 19/34 (55%) Frame = +1 / +2 Query: 1219 IPKQTSGKGKANEGPKCYKCGKEGHISSGCPLRK 1320 +P +++ + +C++C GH+ CP+++ Sbjct: 2657 VPAKSASSVASTGRIQCHRCQGFGHVQKDCPIQR 2758 Score = 48.3 bits (99), Expect(3) = 3e-16 Identities = 22/44 (50%), Positives = 27/44 (61%) Frame = -3 / -2 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLGA P +T HS P+ + K VFHSS I I Sbjct: 4100 KTSFIKRMKVLGALVKPKVITNHSYKPNLVLKDVFHSSPSFILI 3969 Score = 41.4 bits (84), Expect(3) = 3e-16 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+ I+H + NR +I +++N + TH SR+IFL Sbjct: 3951 QVNLCENYRTTQFIKHVV*PRNRMTISDSNIINGSTINTHSSRTIFL 3811 Score = 34.1 bits (68), Expect(3) = 3e-16 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = -2 / -1 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILNSFYR*QPCG 2043 T + +P +Q+ L+ L + L W S + + CS NQ+N +L +R Q G Sbjct: 3786 TRTKALTYIPAVQEILNLPLNSLSLLWVGSISSTVWQ*CSWNQINLMLYPSHRWQSRG 3613 Score = 35.4 bits (71), Expect = 1.8 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -1 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 4098 NLIH*AHESTRCISQTKSHY*PLIQTKFSFKRCFPFISKFHSNLVVATTQVNL 3940
>LOC_Os01g35720:12001.t03124:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8244 Score = 97.7 bits (207), Expect(7) = 1e-61 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 5929 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGR 6108 Score = 69.8 bits (146), Expect(7) = 1e-61 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD ML L + +FTK+D Sbjct: 5788 ILVPKKDGSW*MCVDCRAINNITIRYRHPIPRLDDMLHELCGSIIFTKID 5937 Score = 66.6 bits (139), Expect(7) = 1e-61 Identities = 26/58 (44%), Positives = 43/58 (74%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L ++GI++ I+LIPGASLPN R +P E ++++V++LL +G++R+S+S C VP Sbjct: 5611 LPRMRGIEHQINLIPGASLPNRAAYRTNPDETKEIQRQVQDLLDRGYVRQSLSLCAVP 5784 Score = 56.1 bits (116), Expect(7) = 1e-61 Identities = 20/47 (42%), Positives = 30/47 (63%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRI 1830 Y +V CD+V M +LL RPW+ D D TH G+ + Y+F+ N ++I Sbjct: 5124 YADSVDCDVVPMQACSLLLGRPWEHDNDATHHGRSNKYTFVHNGKKI 5264 Score = 35.0 bits (70), Expect(7) = 1e-61 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +3 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 5034 HPHPYYIQWLNDSGRAKVTQVCRVSFSIGSY 5126 Score = 32.2 bits (64), Expect(7) = 1e-61 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 / +3 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +N + +++ID +C NL+S LV L L T Sbjct: 4935 INNRRARVIIDGGSCNNLVSSDLVKKLGLTT 5027 Score = 25.4 bits (49), Expect(7) = 1e-61 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = +1 / +3 Query: 1264 KCYKCGKEGHISSGCPLRK 1320 +C++C GH+ CP ++ Sbjct: 4668 QCHRCQGFGHVQKDCPSQR 4724 Score = 55.1 bits (114), Expect(3) = 1e-17 Identities = 24/44 (54%), Positives = 29/44 (65%) Frame = -3 / -2 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLGA P G+T HS P+ + KAVFHSS I I Sbjct: 6089 KTSFIKRMKVLGALVKPKGITNHSYKPNLVLKAVFHSSPSFILI 5958 Score = 41.4 bits (84), Expect(3) = 1e-17 Identities = 17/57 (29%), Positives = 32/57 (56%) Frame = -1 / -1 Query: 2409 IHPGV*YGFDEI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 +H + ++ LCE + T+L++H + NR +I +++N + TH R+IFL Sbjct: 5970 LHSNLVIATAQVNLCENNRSTQLMKHVV*PRNRMTISDSNIINGSTINTHSPRTIFL 5800 Score = 32.2 bits (64), Expect(3) = 1e-17 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -2 / -1 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTIL 2073 T + +P +Q+ L+ L ++ L W S + + CS NQ+N +L Sbjct: 5775 TETKALTYIPAVQKVLNLPLNFLGLIWVGSISSTVWQ*CSWNQINLML 5632 Score = 38.6 bits (78), Expect = 0.20 Identities = 21/50 (42%), Positives = 27/50 (54%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + ++ S GIG Y VI L L S H+ Q+PSF G Sbjct: 5945 LRKSIFVKIIDPHNS*SMSSNLGIG*RYRIVILLMALQSTHIHQEPSFLG 5796 Score = 35.9 bits (72), Expect = 1.3 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -1 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 6087 NLIH*AHESTRCISQTKRHY*PLIQTKFSFKSCFPFISKLHSNLVIATAQVNL 5929
>LOC_Os02g30990:12002.t02792:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3773 Score = 96.4 bits (204), Expect(5) = 1e-61 Identities = 37/60 (61%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKT K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2083 KIDMRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 2262 Score = 83.5 bits (176), Expect(5) = 1e-61 Identities = 35/66 (53%), Positives = 45/66 (68%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 L PI+GI++ IDLIPGASLPN R +PKE ++ +V+ELL KG+ RES+SPC VP Sbjct: 1774 LPPIRGIEHQIDLIPGASLPNCVPYRTNPKETKEIQHQVQELLDKGYARESLSPCVVPML 1953 Query: 2232 HAKERW 2249 W Sbjct: 1954 LVHGSW 1971 Score = 57.0 bits (118), Expect(5) = 1e-61 Identities = 22/43 (51%), Positives = 29/43 (67%) Frame = +1 / +1 Query: 2248 GS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 GS MC D + + IT+RYR PIPRL MLD L + +F+K+D Sbjct: 1963 GSWRMCVDCRAINNITIRYRHPIPRLGDMLDELGGSLVFSKID 2091 Score = 56.5 bits (117), Expect(5) = 1e-61 Identities = 19/51 (37%), Positives = 32/51 (62%) Frame = +1 / +2 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ + G + Y F+ N +++++ P Sbjct: 1271 YHDSINCDVVPMQACSMLLGRPWQFDKDSLYFGNSNQYFFVHNGKKLVLHP 1423 Score = 40.9 bits (83), Expect(5) = 1e-61 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC +N + C+++ID +C NL S ++V L L T Sbjct: 1070 TKCVINKRSCRVIIDGGSCNNLASVEMVEKLALST 1174 Score = 57.4 bits (119), Expect(3) = 4e-16 Identities = 24/45 (53%), Positives = 29/45 (64%) Frame = -3 / -1 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + K VFHSS +RI Sbjct: 2246 RKTSFINLMKVLGALVRPKGMTNHSYKPNLVLKVVFHSSPNFMRI 2112 Score = 36.3 bits (73), Expect(3) = 4e-16 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = -2 / -3 Query: 2225 GYRTWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 G T + +PL++ FLH +L + W + + RN+VN +LN Sbjct: 1947 GDNTRTKRLTRIPLVE*FLHLMLYLLCFLWVGPVWHTVWQRGPRNEVNLVLN 1792 Score = 29.9 bits (59), Expect(3) = 4e-16 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -2 / -1 Query: 2339 SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDP 2247 S+I GIG YL V+ L L S HM +P Sbjct: 2054 SSISPSLGIG*RYLIVMLLIALQSTHMRHEP 1962 Score = 31.3 bits (62), Expect(2) = 0.26 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +2 / +3 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R++*+ SHA+W+ C +Y + ++E Sbjct: 2133 *MENNF*N*IRLI*VVSHALWSH*CAQYFHEINE 2234 Score = 30.9 bits (61), Expect(2) = 0.26 Identities = 13/46 (28%), Positives = 20/46 (43%) Frame = +1 / +2 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W +K+T+ +G ++ S Sbjct: 1145 EMVEKLALSTQPHPQPYYIQWFNSSGKVKVTQLVRVHFVIGSYHDS 1282
>LOC_Os02g28400:12002.t02534:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9765 Score = 95.5 bits (202), Expect(7) = 7e-61 Identities = 36/60 (60%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKT K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 5014 KVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 5193 Score = 76.2 bits (160), Expect(7) = 7e-61 Identities = 31/73 (42%), Positives = 45/73 (61%) Frame = +1 / +1 Query: 2158 SREWRNCCKRGTFEKVLAHVLYPLLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGML 2337 S +R C +GT+ + + +L PKKDGS MC D + + IT+RY IPRLD M+ Sbjct: 4804 SVRFRTCLTKGTYVSLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYHHHIPRLDDMV 4983 Query: 2338 D*LSAARLFTKLD 2376 D LS + +F+K+D Sbjct: 4984 DELSGSTVFSKVD 5022 Score = 60.2 bits (125), Expect(7) = 7e-61 Identities = 23/51 (45%), Positives = 33/51 (64%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y V CD+V M +LL RPWQ+D DT H G+ + YSF+ N ++I++ P Sbjct: 4194 YCDFVDCDVVPMHACSLLLGRPWQYDKDTLHHGRTNQYSFMHNGKKIVLHP 4346 Score = 51.9 bits (107), Expect(7) = 7e-61 Identities = 30/136 (22%), Positives = 60/136 (44%) Frame = +1 / +3 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQV 990 T +K +++ RF+P+ + + + Q G SV +Y + +RC L E+E+ + Sbjct: 3189 TWDDLKQIMRARFVPSYYARDMLNKLQQLKHGGTSVEEYYQALQMGMLRCRLVEDEEAAM 3368 Query: 991 ARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTTKAPYLPYPHTEGSSRDH 1170 AR++ GL+ I D L ++ ++ + A K E V+ + +P T ++R Sbjct: 3369 ARFLGGLDREIYDILSYKEYNNMTRLFHYACKAEWEVQG*RAQTRANIPAGRTPWTARSG 3548 Query: 1171 TNRVEEKTAPPKVKRP 1218 + + P Sbjct: 3549 AAPTDRSSVSTSTSAP 3596 Score = 39.6 bits (80), Expect(7) = 7e-61 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 / +3 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQ 1588 +KC V+ + C +ID +C NL+S ++V L LQ Sbjct: 3993 TKCVVHKRSCCTIIDGASCRNLVSTEMVTKLALQ 4094 Score = 29.5 bits (58), Expect(7) = 7e-61 Identities = 16/54 (29%), Positives = 21/54 (38%) Frame = +1 / +3 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L VD F + PED RV + + W Sbjct: 2985 KIKFTIPAFDGKYDPDAYLSWELVVDQKFACHDVPEDKRVRAATSEFTDFASVW 3146 Score = 28.6 bits (56), Expect(7) = 7e-61 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = +1 / +3 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W +K+T+ ++G + Sbjct: 4104 HPHPYYIQWFNNSGRIKVTQLVRLNFAIGSY 4196 Score = 60.6 bits (126), Expect(2) = 6e-15 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ VFHSS IRI Sbjct: 5177 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNVVFHSSPNFIRI 5043 Score = 41.8 bits (85), Expect(2) = 6e-15 Identities = 22/50 (44%), Positives = 27/50 (54%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ + L+ S I S GI YL V+ L L S H+ DPSFFG Sbjct: 5030 LRKSTLEKTVEPLNSSTISSNLGI***YLMVMLLIALQSTHIRHDPSFFG 4881 Score = 74.4 bits (156), Expect(2) = 3e-14 Identities = 31/71 (43%), Positives = 49/71 (69%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 L P++GI++ DLIPGASLPN + +P+E ++++V++LL KG++R S S C Sbjct: 4698 LPPVRGIEHQNDLIPGASLPNRAPYQTNPEETKEIQRQVQDLLDKGNVRVS*SMCCSGDF 4877 Query: 2232 HAKERWILTHV 2264 +KERWI+ +V Sbjct: 4878 GSKERWIMAYV 4910 Score = 33.6 bits (67), Expect(2) = 3e-14 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +2 / +3 Query: 2390 YQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 Y+ *MEN + K V+*+ S A W CTK+ + +DE Sbjct: 5049 YEVGR*MENNI*NKIWVI*VVSDAFWFN*CTKHFHEVDE 5165 Score = 40.5 bits (82), Expect(2) = 6e-08 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ WCI +K H P P + FPFI T+L+ Sbjct: 5184 ERTQNLIHQPHESAWCIS*TKRHH*PLI*PKFCFKCCFPFIAQLHTNLV 5038 Score = 38.2 bits (77), Expect(2) = 6e-08 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLWRE 2230 E S T+ I H I N I G+++N + TH SIFLW + Sbjct: 5010 ENSRATQFIYHII*PRNMMMISNGNVINSSTINTHTP*SIFLWNQ 4876
>LOC_Os04g14840:12004.t01301:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6617 Score = 95.5 bits (202), Expect(5) = 1e-59 Identities = 36/60 (60%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K G +EW+VMPFGL+NAPSTFM LMN++LR F+ + Sbjct: 4102 KIDLRSGYHQIRMKLGDEWKTAFKTKFGFYEWLVMPFGLTNAPSTFMRLMNEILRPFIGR 4281 Score = 74.8 bits (157), Expect(5) = 1e-59 Identities = 29/50 (58%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD MLD L + +FTK+D Sbjct: 3961 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELCGSIIFTKID 4110 Score = 68.9 bits (144), Expect(5) = 1e-59 Identities = 28/58 (48%), Positives = 42/58 (72%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI + IDLI GASLPN R +PKE ++++V++LL +G+ +S+SPC VP Sbjct: 3784 LPPMRGIDHQIDLILGASLPN*ATYRTNPKETKEIQRQVQDLLDRGYEHQSLSPCTVP 3957 Score = 59.3 bits (123), Expect(5) = 1e-59 Identities = 22/51 (43%), Positives = 32/51 (62%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y V CD+V M +LL RPW+ D D TH G+ + Y+F+ N ++I +LP Sbjct: 3295 YADFVDCDVVPMQDCSLLLGRPWEHDNDATHHGRSNKYTFVHNGKKIALLP 3447 Score = 32.7 bits (65), Expect(5) = 1e-59 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+ + C S+G + Sbjct: 3205 HPHPYHIQWLNDSGRAKVAQVCRVSFSIGSY 3297 Score = 55.6 bits (115), Expect(3) = 2e-17 Identities = 24/41 (58%), Positives = 28/41 (68%) Frame = -3 / -1 Query: 2506 FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 FIK +KVLGA P G+T HS NP+ + KAVFHSS I I Sbjct: 4253 FIKRMKVLGALVKPKGITNHS*NPNLVLKAVFHSSPSFILI 4131 Score = 42.8 bits (87), Expect(3) = 2e-17 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++ S GIG Y VI L L S H+ Q+PSF G Sbjct: 4118 LRKSIFVKIIEPHNSSSMSSNLGIG*RYRIVILLMALQSTHIRQEPSFLG 3969 Score = 29.9 bits (59), Expect(3) = 2e-17 Identities = 12/45 (26%), Positives = 25/45 (55%) Frame = -2 / -3 Query: 2192 VPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILNSFYR 2058 +P +Q+ L L ++ L S + + CS+NQ+N +++ +R Sbjct: 3924 IPAVQKILDLPLNFLSLLGVGSISSSVWQ*CSQNQINLMIDPSHR 3790 Score = 41.4 bits (84), Expect(2) = 2e-07 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -1 / -3 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE T+LI+H + NR +I +++N + TH R+IFL Sbjct: 4113 QVNLCENYRTTQLIKHVV*PRNRMTISNSNIINGSTINTHSPRTIFL 3973 Score = 35.4 bits (71), Expect(2) = 2e-07 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = -2 / -3 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P + S + FPFI ++L+ ++ NL Sbjct: 4260 NLIH*AHESTRCISQTKRHY*PLIESKFSFESRFPFISKFHSNLVIATTQVNL 4102
>LOC_Os04g21290:12004.t01862:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3746 Score = 71.2 bits (149), Expect(7) = 1e-58 Identities = 29/58 (50%), Positives = 40/58 (68%) Frame = +1 / +2 Query: 2215 VLYPLLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLDFIKS 2388 V+ +L PKKDGS +C D + + IT+R+R PIPRLD MLD LS + +F+K+D S Sbjct: 2867 VVAVILVPKKDGSWCICVDCRAINNITIRFRHPIPRLDDMLDKLSGSTVFSKVDLHSS 3040 Score = 68.9 bits (144), Expect(7) = 1e-58 Identities = 27/41 (65%), Positives = 33/41 (80%) Frame = +3 / +3 Query: 2412 KTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K LKR GL+EW+VMPFGL+NAPSTFM LMN+VL F+ + Sbjct: 3078 KQPLKRSFGLYEWLVMPFGLTNAPSTFMRLMNEVLCPFIGK 3200 Score = 57.4 bits (119), Expect(7) = 1e-58 Identities = 20/52 (38%), Positives = 35/52 (67%) Frame = +1 / +3 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 +Y +V C +V M ++LL RP QFD D+ H G+ + YSF+++ ++I++ P Sbjct: 2247 NYHDDVECGVVPMQACNILLGRPQQFDRDSMHHGRSNQYSFLYHDKKIVLHP 2402 Score = 54.7 bits (113), Expect(7) = 1e-58 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = +1 / +3 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T +K +++ RF+P+ + L + Q + +SV +Y +E +RCNL E ED Sbjct: 1437 QTWDALKWVMRARFVPSYYARDLLNRLQQLRQSAKSVEEYYQELQMGLLRCNLEETEDAA 1616 Query: 988 VARYINGLNDAIQD 1029 +AR++ GLN I D Sbjct: 1617 MARFLGGLNREIYD 1658 Score = 50.1 bits (103), Expect(7) = 1e-58 Identities = 20/45 (44%), Positives = 32/45 (71%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQK 2186 L P++GI++ IDLI GASLPN R +P+E ++++++EL K Sbjct: 2701 LPPVRGIEHQIDLITGASLPNCAPYRTNPEETKEVQRQIQELHDK 2835 Score = 37.3 bits (75), Expect(7) = 1e-58 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQTHDIQIPTLLDG 1624 +KC + + C+++ID +C NL S ++V L+L P ++G Sbjct: 2050 TKCVIK*RSCRMIID*GSCNNLASSEMVEKLELSAKPHPHPYYING 2187 Score = 25.8 bits (50), Expect(7) = 1e-58 Identities = 7/26 (26%), Positives = 14/26 (53%) Frame = +1 / +2 Query: 1243 GKANEGPKCYKCGKEGHISSGCPLRK 1320 G+ + C++C GH+ CP ++ Sbjct: 1757 GRTRDVQCCHRCKGFGHVQRECPSKR 1834 Score = 47.8 bits (98), Expect(3) = 3e-13 Identities = 24/50 (48%), Positives = 29/50 (58%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG L VI L L S H+ DPSFFG Sbjct: 3036 LCKSTLENTVEPLNLSSISSNLGIG*RNLIVILLIALQSTHIHHDPSFFG 2887 Score = 44.1 bits (90), Expect(3) = 3e-13 Identities = 18/35 (51%), Positives = 21/35 (60%) Frame = -3 / -2 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVF 2411 +T FI +KVLGA P G+T HS NP FK F Sbjct: 3181 KTSFINLMKVLGALVKPKGITNHSYNPKLRFKGCF 3077 Score = 33.6 bits (67), Expect(3) = 3e-13 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -2 / -2 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE LP C+ S SNC GL R + T H+T Sbjct: 2389 IFLSWYRKEYWFDLP*CIESLSNC*GLPSRILHACMGTTPHST 2261 Score = 33.6 bits (67), Expect(2) = 4e-04 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -1 / -2 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E S T+ I+H I NR + +++N + T+ SIFLW Sbjct: 3016 EHSGATQFIKHII*PRNRMTKSNSNIINSSTINTYTP*SIFLW 2888 Score = 31.8 bits (63), Expect(2) = 4e-04 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYP 2448 E +++LIHQ H+ WCI +K H P Sbjct: 3191 ERTQNLIHQPHESAWCIS*TKRHH*P 3114 Score = 29.9 bits (59), Expect(2) = 0.31 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRK 2432 K+ + +HQ+R++ +EWKT K K Sbjct: 3020 KVDLHSSYHQVRMKLGNEWKTTFKTK 3097 Score = 25.4 bits (49), Expect(2) = 0.31 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +2 / +2 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 V+*+ S A W CTK+ + +DE Sbjct: 3104 VI*VVSDAFWFN*CTKHFHEVDE 3172
>LOC_Os09g03870:12009.t00283:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 20740 Score = 97.3 bits (206), Expect(6) = 2e-58 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 12811 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 12990 Score = 75.8 bits (159), Expect(6) = 2e-58 Identities = 30/57 (52%), Positives = 43/57 (75%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPV 2222 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL K ++RES+SPC V Sbjct: 12493 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKRYVRESLSPCAV 12663 Score = 64.8 bits (135), Expect(6) = 2e-58 Identities = 22/52 (42%), Positives = 36/52 (69%) Frame = +1 / +1 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 +Y V CD+V M ++LL RPWQFD D+ H G+ + YSF+++ ++I++ P Sbjct: 12037 NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHP 12192 Score = 49.6 bits (102), Expect(6) = 2e-58 Identities = 25/69 (36%), Positives = 39/69 (56%) Frame = +1 / +2 Query: 913 SVLDYTEEFLRLQVRCNLAENEDQQVARYINGLNDAIQDRLMMQQIWSIDQAQALALKTE 1092 SV +Y +E +RCNL E ED +AR++ GLN I D + + ++ + LA K E Sbjct: 11156 SVEEYYQELQMGFLRCNLEETEDAAMARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAE 11335 Query: 1093 RFVRTRKTT 1119 R V+ R+ + Sbjct: 11336 REVQGRRAS 11362 Score = 40.9 bits (83), Expect(6) = 2e-58 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC V + C+++ID +C NL S ++V L L T Sbjct: 11839 TKCVVKERCCRMIIDGGSCNNLASSEMVEKLSLST 11943 Score = 28.6 bits (56), Expect(6) = 2e-58 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRV 720 K+K + F G D + L VD F EFPE+ RV Sbjct: 10861 KIKFKFPPFDGKYDPDAYLSWEIAVDQKFT*YEFPENTRV 10980 Score = 62.5 bits (130), Expect(3) = 7e-18 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -3 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 12974 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 12840 Score = 46.4 bits (95), Expect(3) = 7e-18 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 12827 LRKSTLENTIEPLNSSSISSNLGIG*RYQMVMLLIALQSTHIRHEPSFFG 12678 Score = 37.7 bits (76), Expect(3) = 7e-18 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -2 / -3 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 I L + KE LP C+ S SNC GL R + T SH+T Sbjct: 12179 IFLSWYRKEYWFDLP*CIESLSNCHGLPSRILHACMGTTSHST 12051 Score = 71.2 bits (149), Expect(2) = 3e-13 Identities = 31/65 (47%), Positives = 41/65 (63%) Frame = +1 / +1 Query: 2182 KRGTFEKVLAHVLYPLLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARL 2361 KR E + + +L PKKDGS MC D + + IT+ YR PIPRLD MLD LS + + Sbjct: 12625 KRYVRESLSPCAVLVILVPKKDGSWRMCVDCRAINNITI*YRHPIPRLDDMLDELSGSIV 12804 Query: 2362 FTKLD 2376 F+K+D Sbjct: 12805 FSKVD 12819 Score = 25.4 bits (49), Expect(2) = 3e-13 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +2 Query: 2404 MNGKPP*RERKGCLNG*SCHLDSQMH 2481 MNGK + GC++G* C L MH Sbjct: 12860 MNGKQHLKRSLGCMSG**CLLV*LMH 12937 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -2 / -2 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++LIHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 12981 ERTQNLIHQPHESAGCIS*TKRHH*PLIQPKLRFKCCFPFITQLHTNLV 12835 Score = 39.1 bits (79), Expect(2) = 3e-08 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 / -2 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I+H I NR +I G+++N + TH +IFLW Sbjct: 12807 EHNRATQFIKHII*PRNRMTISNGNVINSSTINTHTP*TIFLW 12679 Score = 30.4 bits (60), Expect(2) = 3.7 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W+ V Q + + Y+ *MEN + + VV*+ S A W CT++ + +DE Sbjct: 12792 WLYCVLQS*FA*WLPPDSYEVG**MENSI*NEVWVV*VVSDAFWFN*CTQHFHEVDE 12962 Score = 29.9 bits (59), Expect(2) = 3.7 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 E+ E S HP+PY I W+ +TK + ++G ++ Sbjct: 11914 EMVEKLSLSTKPHPHPYYIQWLNNSGKA*VTKLVHINFAIGNYH 12045
>LOC_Os10g16810:12010.t01244:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2512 Score = 85.8 bits (181), Expect(5) = 3e-57 Identities = 33/55 (60%), Positives = 44/55 (80%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLR 2519 K+ ++ +HQIR+R +WKT K K GL+EW+VMPFGL+NAPSTF+ LMN+VLR Sbjct: 2156 KVDLRSDYHQIRMRLGAKWKTTFKTKFGLYEWLVMPFGLTNAPSTFIRLMNEVLR 2320 Score = 75.3 bits (158), Expect(5) = 3e-57 Identities = 30/54 (55%), Positives = 39/54 (72%) Frame = +1 / +2 Query: 2215 VLYPLLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 V+ +L PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D Sbjct: 2003 VVLVILVPKKDGSWRMCVDCRSINNITIRYRHPIPRLDDMLDELSCSTVFSKVD 2164 Score = 70.7 bits (148), Expect(5) = 3e-57 Identities = 29/57 (50%), Positives = 44/57 (77%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPV 2222 L P++GI++ IDLIPGASL N R +P++ ++++V++LL KG+IRES+SPC V Sbjct: 1838 LPPVRGIEH*IDLIPGASLLNRAPYRTNPEKTKEIQRQVQDLLDKGYIRESLSPCVV 2008 Score = 49.2 bits (101), Expect(5) = 3e-57 Identities = 20/51 (39%), Positives = 31/51 (60%) Frame = +1 / +2 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y V CD++ M +LL RP Q+D DT H + + YSF+ N ++I++ P Sbjct: 1334 YCDFVDCDVLPMHACSLLLGRP*QYDKDTLHHVRSNQYSFVHNGKKIVLHP 1486 Score = 36.3 bits (73), Expect(5) = 3e-57 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC +N + +ID +C NL+S ++V L LQT Sbjct: 1133 TKCVINKRS*CTIIDEGSCRNLVSTEMVTKLALQT 1237 Score = 58.3 bits (121), Expect(2) = 7e-16 Identities = 24/45 (53%), Positives = 30/45 (66%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ VFH + LIRI Sbjct: 2319 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNVVFHLAPNLIRI 2185 Score = 47.3 bits (97), Expect(2) = 7e-16 Identities = 23/50 (46%), Positives = 29/50 (58%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ + L+ S+I S GIG YL V+ L L S H+ DPSFFG Sbjct: 2172 LRKSTLEKTVEQLNSSSISSNLGIG*RYLMVMLLIDLQSTHIRHDPSFFG 2023 Score = 41.8 bits (85), Expect(2) = 9e-07 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = -1 / -1 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLWRE 2230 E S T+ I+H I NR +I G+++N + TH SIFLW + Sbjct: 2152 ENSRATQFIKHII*PRNRMTISNGNVINRSTINTHTP*SIFLWNQ 2018 Score = 32.7 bits (65), Expect(2) = 9e-07 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -2 / -1 Query: 2519 SKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 +++LIHQ + WCI +K H P P + FPF T+L+ Sbjct: 2320 TQNLIHQPDESAWCIS*TKRHH*PLI*PKFCFKCCFPFSAQPHTNLV 2180 Score = 33.6 bits (67), Expect(3) = 2e-05 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +2 / +1 Query: 2390 YQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 Y+ *MEN + K V+*+ S A W CTK+ + +DE Sbjct: 2191 YEVGR*MENNI*NKIWVI*VVSDAFWFN*CTKHFHQVDE 2307 Score = 27.2 bits (53), Expect(3) = 2e-05 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +1 / +3 Query: 2158 SREWRNCCKRGTFEKVLAHVLY 2223 S +R C +GT+ +L HVL+ Sbjct: 1944 SVRFRTCLTKGTYASLLVHVLF 2009 Score = 25.4 bits (49), Expect(3) = 2e-05 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +2 / +3 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVC 2335 QRKMD CV + L P I LF M+C Sbjct: 2025 QRKMDHGVCVLIVDLLITLPLDIVILFLG*MIC 2123
>LOC_Os06g25800:12006.t02387:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4211 Score = 96.8 bits (205), Expect(3) = 5e-56 Identities = 38/60 (63%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN VLR F+ + Sbjct: 1381 KIDLRSGYHQIRMKLGDEWKTAFKTKIGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGK 1560 Score = 84.9 bits (179), Expect(3) = 5e-56 Identities = 32/58 (55%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDL+PGASLPN P R +P E ++++V+ELL KG++RES+SPC VP Sbjct: 1063 LPPLRGIEHQIDLVPGASLPNRPAYRTNPAETKEIQRQVKELLDKGYVRESLSPCAVP 1236 Score = 77.1 bits (162), Expect(3) = 5e-56 Identities = 32/50 (64%), Positives = 37/50 (74%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + ITVRYR PIPRLD MLD LS + +FTK+D Sbjct: 1240 LLVPKKDGSWRMCVDCRALNAITVRYRHPIPRLDDMLDELSGSIIFTKID 1389 Score = 59.7 bits (124), Expect(2) = 4e-18 Identities = 28/47 (59%), Positives = 33/47 (70%) Frame = -3 / -1 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI** 2378 R+T FIK IKV GAF PNG+T+HS P + AVFHSS +RI** Sbjct: 1544 RKTWFIKRIKVEGAFVKPNGITSHS*RPILVLNAVFHSSPSFMRI** 1404 Score = 53.3 bits (110), Expect(2) = 4e-18 Identities = 26/53 (49%), Positives = 31/53 (58%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFGVSR 2226 L KS V + L+ SN+ S RG+G Y TVI L S HM Q+PSFFG R Sbjct: 1397 LRKSILVKMMEPLNSSNMSSSRGMGWRYRTVIALRARQSTHMRQEPSFFGTKR 1239 Score = 41.4 bits (84), Expect(2) = 6e-08 Identities = 21/57 (36%), Positives = 30/57 (52%) Frame = -2 / -3 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 E S +++H HK I ++KWH PF + S + FPFI DLM ++ NL Sbjct: 1551 ESS*NMVH*AHKS*RSICQAKWHHKPFIETNFSFKRCFPFITKFHADLMIATTQINL 1381 Score = 37.3 bits (75), Expect(2) = 6e-08 Identities = 18/72 (25%), Positives = 35/72 (48%) Frame = -2 / -3 Query: 2282 TTLMSVHMCQDPSFFGVSRGYRTWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRET 2103 +T ++ H + + G TW F+N+P +Q+ + L ++ L + W I + Sbjct: 1293 STTINTHAPRAIFLWN*KNGNSTW**GFTNIPFVQKLFYLSLNFLCLCRIGAVGWTIWKR 1114 Query: 2102 CSRNQVNTILNS 2067 + Q+N +LNS Sbjct: 1113 STWYQINLMLNS 1078 Score = 39.6 bits (80), Expect(2) = 0.001 Identities = 23/57 (40%), Positives = 30/57 (52%) Frame = +2 / +3 Query: 2336 WISLVRQDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 W QD +SSNP++T *MEN + +*M AIW KC+ YAL+E Sbjct: 1362 WFHHFHQD*FA*WLSSNPHETW**MENSV*N*NWSL*MACDAIWLDKCSFNFYALNE 1532 Score = 24.0 bits (46), Expect(2) = 0.001 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +3 / +3 Query: 2205 ISPCPVPPAHAKERWILTHV 2264 I+ C +KERW+L HV Sbjct: 1218 ITMCCSRSFSSKERWLLAHV 1277 Score = 33.6 bits (67), Expect = 6.4 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = -1 / -3 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 +I L E T+ I H I++ N +I + + TH R+IFLW Sbjct: 1392 QINLGENDGTTQFI*HVIKSWNGMAISNSYSIESTTINTHAPRAIFLW 1249
>LOC_Os12g26500:12012.t02363:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4493 Score = 97.3 bits (206), Expect(3) = 4e-54 Identities = 37/60 (61%), Positives = 49/60 (81%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 1400 KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK 1579 Score = 82.6 bits (174), Expect(3) = 4e-54 Identities = 32/58 (55%), Positives = 45/58 (77%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI++ IDLIPGASLPN R +P+E ++++V ELL KG++RES+SPC VP Sbjct: 1082 LPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVP 1255 Score = 72.5 bits (152), Expect(3) = 4e-54 Identities = 28/50 (56%), Positives = 37/50 (74%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RYR PIPRLD +LD LS + +F+K+D Sbjct: 1259 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDILDELSGSIVFSKVD 1408 Score = 62.5 bits (130), Expect(2) = 7e-17 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -3 / -3 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P G+T HS NP+F+ AVFHSS IRI Sbjct: 1563 RKTSFINLMKVLGALVKPKGITNHSYNPNFVLNAVFHSSPNFIRI 1429 Score = 46.4 bits (95), Expect(2) = 7e-17 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+ N + L+ S+I S GIG Y V+ L L S H+ +PSFFG Sbjct: 1416 LRKSTLENTIEPLNSSSISSNLGIG*RYRMVMLLIALQSTHIRHEPSFFG 1267 Score = 38.6 bits (78), Expect(2) = 7e-07 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = -2 / -2 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E +++ IHQ H+ CI +K H P QP L + FPFI T+L+ Sbjct: 1570 ERTQNFIHQPHESAGCIS*TKRHH*PLIQPKLRFKCCFPFITQLHTNLV 1424 Score = 36.3 bits (73), Expect(2) = 7e-07 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = -1 / -2 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLW 2236 E + T+ I++ I NR +I G+++N + TH +IFLW Sbjct: 1396 EHNRATQFIKYII*PRNRMTISNGNVINSSTINTHTP*TIFLW 1268
>LOC_Os03g35326:12003.t03022:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4602 Score = 97.7 bits (207), Expect(3) = 2e-53 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 2371 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 2550 Score = 77.6 bits (163), Expect(3) = 2e-53 Identities = 32/58 (55%), Positives = 44/58 (75%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI GI++ IDLIP ASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 2053 LPPI*GIEHQIDLIPRASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVP 2226 Score = 75.3 bits (158), Expect(3) = 2e-53 Identities = 30/50 (60%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F K+D Sbjct: 2230 LLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFCKID 2379 Score = 59.3 bits (123), Expect(2) = 2e-15 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + KAVFHSS +RI Sbjct: 2534 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKAVFHSSPNFMRI 2400 Score = 44.6 bits (91), Expect(2) = 2e-15 Identities = 23/50 (46%), Positives = 27/50 (54%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM +PSF G Sbjct: 2387 LRKSILQNTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRHEPSFLG 2238
>LOC_Os07g20720:12007.t01876:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 15138 Score = 96.8 bits (205), Expect(4) = 3e-51 Identities = 38/60 (63%), Positives = 48/60 (80%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR+ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 3703 KIDLRSGYHQIRMNLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 3882 Score = 84.0 bits (177), Expect(4) = 3e-51 Identities = 33/58 (56%), Positives = 46/58 (79%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L PI+GI++ IDLIPGASLPN R +P+E ++++V+ELL KG++RES+SPC VP Sbjct: 3385 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVP 3558 Score = 64.3 bits (134), Expect(4) = 3e-51 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 2881 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 3033 Score = 38.6 bits (78), Expect(4) = 3e-51 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 2680 TKCVIKERSCRVIIDGGSCNNLASAEMVEKLALST 2784 Score = 76.7 bits (161), Expect(3) = 8e-17 Identities = 32/61 (52%), Positives = 39/61 (63%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLDFIKSVSDPGM 2406 LL PKKDGS MC D + + IT+RYR PIPRLD MLD LS + +F+K+D M Sbjct: 3562 LLVPKKDGSRRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRM 3741 Query: 2407 N 2409 N Sbjct: 3742 N 3744 Score = 33.6 bits (67), Expect(3) = 8e-17 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 / +1 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 2755 EMVEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 2892 Score = 31.8 bits (63), Expect(3) = 8e-17 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 / +3 Query: 2405 *MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 *MEN R +*+ SHA+W+ CT+Y + ++E Sbjct: 3753 *MENSF*N*IRPI*VVSHALWSH*CTQYFHEINE 3854 Score = 58.3 bits (121), Expect(2) = 3e-15 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -3 / -2 Query: 2518 RRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 R+T FI +KVLGA P GMT HS P+ + KAVFHSS +RI Sbjct: 3866 RKTSFINLMKVLGALVRPKGMTNHSYRPNLVLKAVFHSSPKFMRI 3732 Score = 45.1 bits (92), Expect(2) = 3e-15 Identities = 23/50 (46%), Positives = 28/50 (56%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS N L+ S+I S GIG YL V+ L L S HM ++PSF G Sbjct: 3719 LRKSILENTSEPLNSSSISSSLGIG*RYLIVMLLIALQSTHMRREPSFLG 3570 Score = 36.3 bits (73), Expect = 0.96 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +1 / +3 Query: 2224 PLLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 P+L KK G MC D + K + F +PR+D ++D ++ L + LD Sbjct: 12345 PILVWKKTGQWRMCVDYTDLNKSCPQDPFGLPRIDQVVDLTASCELLSFLD 12497
>LOC_Os09g06200:12009.t00417:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1492 Score = 90.4 bits (191), Expect(6) = 6e-51 Identities = 35/60 (58%), Positives = 46/60 (76%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +HQI I+ DEWKT K K GL+EW+VMPFGL+NAPSTFM LMN+VL F+ + Sbjct: 923 KVDLRSGYHQIGIKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLLPFIEK 1102 Score = 77.6 bits (163), Expect(6) = 6e-51 Identities = 29/55 (52%), Positives = 44/55 (80%) Frame = +3 / +3 Query: 2061 IKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 ++GI++ IDLIPGASLPN R +P+E ++++V++LL KG++RES+SPC VP Sbjct: 636 VRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQDLLDKGYVRESLSPCAVP 800 Score = 57.4 bits (119), Expect(6) = 6e-51 Identities = 22/51 (43%), Positives = 32/51 (62%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y V CD+V M +LL RPWQ+D DT H + + YSF+ N ++I++ P Sbjct: 124 YYDFVDCDVVPMHACSLLLGRPWQYDKDTLHHDRTNQYSFMHNGKKIVLHP 276 Score = 31.8 bits (63), Expect(6) = 6e-51 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +1 / +2 Query: 2296 VRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + R+ PRLD MLD LS + +F+K+D Sbjct: 851 ITIRYCHPRLDDMLDELSGSTVFSKVD 931 Score = 29.0 bits (57), Expect(6) = 6e-51 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +1 / +2 Query: 2248 GS*HMCTDIKVVKKITVRYRFP 2313 GS MC D + + IT+RY P Sbjct: 809 GSWRMCVDCRAINNITIRYCHP 874 Score = 25.8 bits (50), Expect(6) = 6e-51 Identities = 9/32 (28%), Positives = 16/32 (50%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 HP+PY I +K+T+ ++G +Y Sbjct: 34 HPHPYYIQLFNNSGRIKVTQLVRLNFAIGSYY 129 Score = 55.1 bits (114), Expect = 2e-06 Identities = 23/44 (52%), Positives = 28/44 (63%) Frame = -3 / -2 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FI +KVLGA P G+T HS NP+F+ VFHSS I I Sbjct: 1083 KTSFINLMKVLGALVKPKGITNHSYNPNFVLNVVFHSSPNFIPI 952 Score = 40.0 bits (81), Expect = 0.075 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 E ++LIHQ H+ WCI +K H P P + FPFI T+L+ Sbjct: 1093 ERKQNLIHQPHESAWCIS*TKGHH*PLI*PKFCFKCRFPFIAQLYTNLV 947 Score = 34.1 bits (68), Expect(2) = 0.28 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +2 / +1 Query: 2384 NPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 N Y+ *MEN + K V+*+ S A+W CTK+ + +DE Sbjct: 952 NWYKVGR*MENDI*NKIWVI*VVSDALWFN*CTKHFHEVDE 1074 Score = 26.7 bits (52), Expect(2) = 0.28 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +1 / +1 Query: 2158 SREWRNCCKRGTFEKVLAHVLY 2223 S +R C +GT+ +L HVL+ Sbjct: 733 SVRFRTCLTKGTYVNLLVHVLF 798
>LOC_Os09g07600:12009.t00556:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4002 Score = 89.5 bits (189), Expect(3) = 4e-47 Identities = 34/60 (56%), Positives = 46/60 (76%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 K+ ++ +H IR++ DEWKTA K K GL+EW+VMPFGL+NAP TFM LMN+VL F+ + Sbjct: 1839 KVDLRSGYHHIRMKLGDEWKTAFKTKFGLYEWLVMPFGLNNAPDTFMRLMNEVLCAFIGK 2018 Score = 70.7 bits (148), Expect(3) = 4e-47 Identities = 29/58 (50%), Positives = 42/58 (72%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P+ GI++ IDLIPGASLPN + +P+E + V++LL KG++RES+SPC +P Sbjct: 1521 LPPL*GIEHQIDLIPGASLPNRAPYKTNPEETKEI*CEVQKLLYKGYVRESLSPCALP 1694 Score = 68.9 bits (144), Expect(3) = 4e-47 Identities = 29/50 (58%), Positives = 35/50 (70%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKK GS MC D + IT+RY PIPRLDGMLD LSA +F+K+D Sbjct: 1698 ILVPKKYGSWRMCVDCGAINDITIRYCHPIPRLDGMLDELSAVVVFSKVD 1847 Score = 56.1 bits (116), Expect(2) = 5e-17 Identities = 23/44 (52%), Positives = 30/44 (68%) Frame = -3 / -3 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FI +KV GA +P GMT HS NP+ + KAVFHSS +R+ Sbjct: 1999 KTSFINLMKVSGALFNPKGMTNHSYNPNLVLKAVFHSSPSFMRM 1868 Score = 53.3 bits (110), Expect(2) = 5e-17 Identities = 26/50 (52%), Positives = 30/50 (60%) Frame = -2 / -3 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS+F N AL+ S+IPSRRGIG Y VI L S H+ DP F G Sbjct: 1855 LRKSTFENTTTALNSSSIPSRRGIG*QYRMVISLIAPQSTHIRHDPYFLG 1706 Score = 46.9 bits (96), Expect(2) = 4e-12 Identities = 21/42 (50%), Positives = 26/42 (61%) Frame = -2 / -2 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIP 2400 E +++LIHQ H+ CI SK HD P P LS + FPFIP Sbjct: 2009 ESTQNLIHQSHESIRCII*SKGHD*PLI*PKLSFESSFPFIP 1884 Score = 46.0 bits (94), Expect(2) = 4e-12 Identities = 19/37 (51%), Positives = 25/37 (67%) Frame = -1 / -2 Query: 2349 TKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 T+LI+HTIQ NR +I GD++N + TH SIFL Sbjct: 1820 TQLIKHTIQTWNRVTISNGDIVNSSTINTHTP*SIFL 1710 Score = 39.6 bits (80), Expect(2) = 7e-07 Identities = 18/44 (40%), Positives = 27/44 (61%) Frame = +2 / +2 Query: 2375 ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 I + ++T G*MEN + V+*+ SHA+W CT Y + +DE Sbjct: 1859 IPPHSHETRG*MENCFQN*VWVI*VVSHALWIK*CT*YFHEIDE 1990 Score = 35.4 bits (71), Expect(2) = 7e-07 Identities = 18/41 (43%), Positives = 22/41 (53%) Frame = +2 / +1 Query: 2240 RKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWISLVRQDC 2362 R MD CV ++ L SP I +LF WMVC +S V C Sbjct: 1711 RNMDHGVCVLIVELLTISPFDIVTLFHVWMVCLMS*VLLLC 1833 Score = 30.4 bits (60), Expect(2) = 0.028 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +3 / +2 Query: 2208 SPCPVPPAHAKERWILTHVYGH*SR*EDHRKV*IPYSPPGWY 2333 S C + A E WI+ +V S * H + PYS GWY Sbjct: 1679 SLCSSGNSSA*EIWIMAYVC*LWSY*RYHHSILSPYSTSGWY 1804 Score = 28.6 bits (56), Expect(2) = 0.028 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 / +1 Query: 2401 GMNGKPP*RERKGCLNG*SCHLDSQMHQV 2487 GMNGK + G ++G*SC LD MH + Sbjct: 1885 GMNGKLLSKLSLGYMSG*SCPLD*IMHLI 1971
>LOC_Os09g06220:12009.t00419:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 7304 Score = 73.9 bits (155), Expect(6) = 3e-44 Identities = 29/58 (50%), Positives = 42/58 (72%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L ++GI++ IDLIPGASLPN R +P+E ++ +V+E L KG++ ES+SPC VP Sbjct: 6494 LPSVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQHQVQEFLDKGYVCESLSPCAVP 6667 Score = 65.2 bits (136), Expect(6) = 3e-44 Identities = 33/101 (32%), Positives = 57/101 (56%) Frame = +1 / +2 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T* +K +++ RF+P+ + L + Q +G +SV +Y +E +RCNL E +D Sbjct: 5030 QT*DALKRVMRARFVPSYYARDLLNRLQQLRQGTKSVEEYYQELQMGLLRCNLEETQDAG 5209 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTR 1110 +AR++ GLN I D + + ++ + LA K ER V+ R Sbjct: 5210 MARFLGGLNHEIYDIVDYKYYTNMTRLIHLACKAEREVQGR 5332 Score = 55.6 bits (115), Expect(6) = 3e-44 Identities = 24/82 (29%), Positives = 43/82 (52%) Frame = +1 / +2 Query: 1687 HYRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILPNKIDGNIS 1866 +YR V CD+V M ++LL R WQF D G+ + YSF+++ ++I++ P + + Sbjct: 6038 NYRDVVECDVVSMQACNILLGRRWQFGRDFMQHGRSNQYSFMYHGKKIVLHPMSPEDFLC 6217 Query: 1867 KEEGKSMLTISHTSNEFMEDMK 1932 + K+ + S + D K Sbjct: 6218 DDVAKAAKSKSGSDKNAQSDGK 6283 Score = 39.6 bits (80), Expect(6) = 3e-44 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 5840 TKCVIKERSCRMIIDGGSCNNLASSEMVEKLALST 5944 Score = 34.1 bits (68), Expect(6) = 3e-44 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRY 2304 +L KKDGS MC D + + IT+R+ Sbjct: 6671 ILVRKKDGSRSMCVDCRAINNITIRW 6748 Score = 31.8 bits (63), Expect(6) = 3e-44 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 / +2 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K +I F G D + L VD F EFPE+ RV + + W Sbjct: 4829 KIKFKIPPFDGKYDPDAYLSWEIVVDQKFACHEFPENTRVRAATSEFTDFASVW 4990 Score = 38.2 bits (77), Expect(2) = 0.005 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -2 / -3 Query: 1829 ILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNTFER* 1689 I L + +KE LP C+ S NCQ L R + T SH+T R* Sbjct: 6180 IFLPWYIKEYWFDLPCCIKSLPNCQRLPNRILHACMDTTSHSTTSR* 6040 Score = 30.9 bits (61), Expect(2) = 0.005 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -2 / -3 Query: 2306 LYLTVIFLTTLMSVHMCQDPSFF 2238 ++L V+ L L S H+ +DPSFF Sbjct: 6750 IHLMVMLLIALQSTHILRDPSFF 6682
>LOC_Os09g10870:12009.t00877:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4795 Score = 70.7 bits (148), Expect(8) = 4e-43 Identities = 29/54 (53%), Positives = 37/54 (68%) Frame = +1 / +3 Query: 2215 VLYPLLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 V+ LL PKK GS MC D + + IT+ YR PIPRLD MLD LS + +F+K+D Sbjct: 2355 VVLVLLVPKKYGSWRMCVDCRAINNITMHYRHPIPRLDDMLDELSGSTIFSKID 2516 Score = 58.3 bits (121), Expect(8) = 4e-43 Identities = 26/57 (45%), Positives = 36/57 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPV 2222 L P +GI++ I LIPGA LP + +PKE ++ +V ELL KG ++ES PC V Sbjct: 2190 LPPKRGIEHKI*LIPGAQLPIAHRTAPTPKETKEIQHQVRELLNKGFVKESRYPCVV 2360 Score = 43.7 bits (89), Expect(8) = 4e-43 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y V CD+V +LL RPW +D D G+ + + I+ I +LP Sbjct: 1698 YEDQVECDVVPKQACQLLLGRPWLYDHDVQISGRNNKHVLIYKDEHISLLP 1850 Score = 37.7 bits (76), Expect(8) = 4e-43 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +2 / +3 Query: 1496 TVNGKVCKLVIDSCNCENLISQKLVNHLKLQTHDIQIPTLLDGSRKV*I*RSPSNATRHF 1675 T+N VC +++D+ +C N++S KLV L L+ P L R + T HF Sbjct: 1506 TINNIVCHIIVDNGSCNNIVSLKLVKILGLRQRHHPAPYKLQWLNDYGALRVKTIVTVHF 1685 Score = 37.3 bits (75), Expect(8) = 4e-43 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRK 2432 KI ++ +HQIR++ DEWKTA K K Sbjct: 2508 KIDLRSGYHQIRMKEGDEWKTAFKNK 2585 Score = 33.1 bits (66), Expect(8) = 4e-43 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +3 / +1 Query: 2412 KTALKRKEGLFEWVVMPFGLSNAP 2483 K K K L+EW+VM F L+NAP Sbjct: 2566 KQLSKTKFSLYEWLVMTFDLTNAP 2637 Score = 26.3 bits (51), Expect(8) = 4e-43 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +3 / +3 Query: 2487 TFMHLMNQVLRQFL 2528 TFM LMN VLR F+ Sbjct: 2643 TFMRLMNHVLRPFI 2684 Score = 25.8 bits (50), Expect(8) = 4e-43 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +1 / +1 Query: 1267 CYKCGKEGHISSGCPLRK 1320 C+KC GHI++ P R+ Sbjct: 1237 CHKCHGRGHIAAESPSRR 1290 Score = 34.5 bits (69), Expect(3) = 3e-05 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = -2 / -1 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFGVSR 2226 L KS + LS S+I S G+G L V+ L S HM +P F G R Sbjct: 2524 LRKSILEKIVEPLSSSSISSSLGMGCL*CMVMLLIARQSTHMRHEPYFLGTKR 2366 Score = 25.8 bits (50), Expect(3) = 3e-05 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -3 / -3 Query: 2482 GAFESPNGMTTHSNNPSFLFKAVF 2411 GAF N +T HS +F+F++ F Sbjct: 2636 GAFVKSNVITNHSYKLNFVFESCF 2565 Score = 25.4 bits (49), Expect(3) = 3e-05 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -2 / -3 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFW 2136 T TF P ++QF + +L + FW Sbjct: 2354 TRITTFFYKPFVEQFSYLVLNFFCFFW 2274 Score = 33.1 bits (66), Expect(2) = 0.068 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -1 / -3 Query: 2364 EQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 E S TK I+H I++ I +GD+++ + TH +IFL Sbjct: 2504 ENSRTTKFIKHIIKSRYGMPIVHGDVIDSSTIDTHAP*TIFL 2379 Score = 24.4 bits (47), Expect(2) = 0.068 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -3 / -1 Query: 2452 THSNNPSFLFKAVFHSSRGLIRI** 2378 T N KAVFHSS +RI** Sbjct: 2605 TTHTN*ILFLKAVFHSSPSFMRI** 2531
>LOC_Os07g22310:12007.t01935:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 7305 Score = 97.7 bits (207), Expect(3) = 1e-40 Identities = 38/60 (63%), Positives = 49/60 (81%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQIR++ DEWKTA K K GL+EW+VMPFGL+NAPSTFM LMN+VLR F+ + Sbjct: 6553 KIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGR 6732 Score = 72.1 bits (151), Expect(3) = 1e-40 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 +L PKKDGS MC D + + IT+RY PIPRLD MLD L + +FTK+D Sbjct: 6412 ILVPKKDGSWRMCVDCRAINNITIRYHHPIPRLDDMLDELFGSIIFTKID 6561 Score = 51.0 bits (105), Expect(3) = 1e-40 Identities = 28/95 (29%), Positives = 46/95 (48%) Frame = +1 / +2 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 ++*+ +K + ++P ILF + Q + R+V Y + +RC L E E+ + Sbjct: 4238 QS*KDLKRYFRDVYVPMYYADILFNKLQCLKQDTRTVTSYYHDMQACLLRCGLDECEEAK 4417 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTE 1092 R++ GLN IQD L Q+ S+ LA E Sbjct: 4418 ELRFLFGLNKKIQDMLDCQRYTSLSHLLQLACNAE 4522 Score = 55.1 bits (114), Expect(2) = 2e-13 Identities = 24/44 (54%), Positives = 29/44 (65%) Frame = -3 / -2 Query: 2515 RT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI 2384 +T FIK +KVLGA P G+T HS P+ + KAVFHSS I I Sbjct: 6713 KTSFIKRMKVLGALVKPKGITNHSYKPNLVLKAVFHSSPSFILI 6582 Score = 41.8 bits (85), Expect(2) = 2e-13 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = -2 / -2 Query: 2384 LMKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFG 2235 L KS FV + + S++ S GIG Y VI L L S H+ Q+PSF G Sbjct: 6569 LRKSIFVKIIEPNNSSSMSSNLGIG**YRIVILLMALQSTHIRQEPSFLG 6420 Score = 37.3 bits (75), Expect(2) = 2e-06 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ LCE +LI+H + NR I +++N + TH R+IFL Sbjct: 6564 QVNLCENYRAKQLIKHVV*PRNRMMISDSNIINGSTINTHSPRTIFL 6424 Score = 36.3 bits (73), Expect(2) = 2e-06 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -2 / -1 Query: 2513 DLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKSSFVNNL 2355 +LIH H+ T CI ++K H P Q S + FPFI ++L+ ++ NL Sbjct: 6711 NLIH*AHESTRCISQTKRHY*PLIQTKFSFKSCFPFISKFHSNLVVATTQVNL 6553
>LOC_Os01g29910:12001.t02673:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 10194 Score = 74.8 bits (157), Expect(6) = 2e-38 Identities = 37/104 (35%), Positives = 61/104 (58%) Frame = +1 / +2 Query: 808 RT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQ 987 +T MK +++ RF+P+ + L + Q +GN+SV +Y + +RC L EN+D Sbjct: 7580 QTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVENDDAG 7759 Query: 988 VARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTT 1119 +AR++ GLN IQD L ++ SI++ LA K ER V+ R+ + Sbjct: 7760 MARFMGGLNREIQDILAYKEYNSINRLFHLACKAEREVQGRRAS 7891 Score = 64.3 bits (134), Expect(6) = 2e-38 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +1 / +2 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL RPWQFD D+ H GK + YSF+ N +++++ P Sbjct: 8597 YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHP 8749 Score = 49.6 bits (102), Expect(6) = 2e-38 Identities = 21/41 (51%), Positives = 30/41 (73%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEE 2174 L PI+GI++ IDLIPGASLPN R +P+E +++V+E Sbjct: 9101 LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKENQRQVDE 9223 Score = 39.1 bits (79), Expect(6) = 2e-38 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 / +2 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQT 1591 +KC + + C+++ID +C NL S ++V L L T Sbjct: 8396 TKCVIKERSCRVIIDGGSCNNLASAEMVEKLSLST 8500 Score = 28.6 bits (56), Expect(6) = 2e-38 Identities = 15/54 (27%), Positives = 21/54 (38%) Frame = +1 / +2 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 K+K I F G D + L +D F FPE+ RV + + W Sbjct: 7379 KIKFTIPCFDGKYDPDAYLTWELAIDQKFACHNFPENKRVRAATSEFTDFASIW 7540 Score = 25.8 bits (50), Expect(6) = 2e-38 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +3 / +2 Query: 189 CCFKWYQSPVDPYKFFLSPL 248 CC KWY+S + F++ L Sbjct: 5774 CCIKWYESSSCSVRDFITSL 5833 Score = 34.1 bits (68), Expect = 4.7 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 / +2 Query: 1561 EVGEPFKASNP*HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHYRS 1698 E+ E S HP PY I W+ +K+T+ ++G ++ S Sbjct: 8471 EMVEKLSLSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDS 8608
>LOC_Os09g04660:12009.t00362:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4575 Score = 58.8 bits (122), Expect(6) = 7e-35 Identities = 20/51 (39%), Positives = 32/51 (62%) Frame = +1 / +3 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y ++ CD+V M +LL PW+ D D TH G+ + Y+F+ N ++I +LP Sbjct: 1650 YADSIDCDVVPMQACSLLLGHPWEHDNDATHHGRSNKYTFVHNGKKITLLP 1802 Score = 53.8 bits (111), Expect(6) = 7e-35 Identities = 22/48 (45%), Positives = 35/48 (72%) Frame = +3 / +3 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKG 2189 +RL P++ I++ IDLIPGASLPN R +P+E ++++V++LL G Sbjct: 2133 SRLPPMRWIEHQIDLIPGASLPNHAAYRTNPEETKEIQRQVQDLLDHG 2276 Score = 46.4 bits (95), Expect(6) = 7e-35 Identities = 24/101 (23%), Positives = 52/101 (51%) Frame = +1 / +3 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENEDQQV 990 T + +K ++ RF+P + L + +G++SV D E + RC + E + + Sbjct: 660 TWEGLKVAMRDRFVPPSYHRDLRKKLMRLEQGDKSVQD*YGELQKGVRRCGIVEGIEDAI 839 Query: 991 ARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRK 1113 R+ +GL + IQ+ + ++ S++Q A+ E+ ++ R+ Sbjct: 840 CRFYSGLREEIQNIVDYKEFNSVNQLFQFAMLAEKELQGRE 962 Score = 39.1 bits (79), Expect(6) = 7e-35 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = +1 / +3 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK +I +FSG D E LD V+ F PE HRV + + K W Sbjct: 462 KVKFKIPSFSGYYDAEKYLDWEITVEQMFNAHLVPEQHRVRQASSEFKDFAIMW 623 Score = 33.6 bits (67), Expect(6) = 7e-35 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = +1 / +3 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP PY I W+ K+T+ C S+G + Sbjct: 1560 HPYPYHIQWLNDSGRAKVTQVCRVSFSIGSY 1652 Score = 32.7 bits (65), Expect(6) = 7e-35 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +2 / +3 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKLQTHDIQIP 1609 +N + +++ID +C NL+S LV L L T P Sbjct: 1461 INNRRARVIIDGGSCNNLVSSDLVKKLGLTTRTHPYP 1571
>LOC_Os11g23040:12011.t01974:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4847 Score = 78.0 bits (164), Expect(5) = 1e-34 Identities = 29/58 (50%), Positives = 45/58 (77%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P++GI+ IDLIPGASLPN R +PKE ++++V++LL +G++R+S+SPC +P Sbjct: 1765 LPPMRGIERQIDLIPGASLPNRAAYRTNPKETKEIQRQVQDLLDRGYVRQSLSPCAIP 1938 Score = 57.0 bits (118), Expect(5) = 1e-34 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y +V CD+V M +LL RPW+ D TH G+ + Y+F+ N+++I LP Sbjct: 1276 YAYSVDCDVVPMQACSLLLSRPWEHDNYATHNGRSNKYTFVHNEKKITSLP 1428 Score = 43.7 bits (89), Expect(5) = 1e-34 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPI 2316 +L P+KDGS MC D + + I +RYR PI Sbjct: 1942 ILVPRKDGSWRMCVDCRAINNIIIRYRHPI 2031 Score = 34.5 bits (69), Expect(5) = 1e-34 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKH 1689 HP+PY I W+ K+T+ C S+G + Sbjct: 1186 HPHPYHIQWLNVSGRAKVTQVCRVSFSIGSY 1278 Score = 30.4 bits (60), Expect(5) = 1e-34 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +2 / +1 Query: 1499 VNGKVCKLVIDSCNCENLISQKLVNHLKL 1585 +N + +++ID +C NL+S LV L L Sbjct: 1087 INNRRARVIIDGGSCNNLVSSDLVKKLGL 1173 Score = 35.0 bits (70), Expect(2) = 1.4 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = -2 / -3 Query: 2216 TWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILNSFYR*QPCG 2043 T + +P +Q+ L+ L ++ L W S + + CS NQ+N L +R Q G Sbjct: 1929 TRTKALTYIPAVQKILNLPLNFLSLLWVGSISSTVWQ*CSWNQINLTLYPSHRWQSRG 1756 Score = 24.9 bits (48), Expect(2) = 1.4 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = -2 / -1 Query: 1796 LSLPLCVVSTSNCQGLTRRTWLVSISTMSHNT 1701 L LPLCV S QG ++ I T S +T Sbjct: 1382 LLLPLCVA*LSCSQGRLNKSEQACIGTTSQST 1287
>LOC_Os05g21230:12005.t01884:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2395 Score = 68.4 bits (143), Expect(4) = 1e-34 Identities = 36/116 (31%), Positives = 58/116 (50%) Frame = +1 / +1 Query: 757 WWHRVQEERMLRGEPRGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEE 936 WW +V +R EP T QMK + RF+P+ + LF + QN +G V +Y E Sbjct: 712 WWEQVLNQREEHDEPGVATWVQMKHEMHARFVPSHYKRDLFERLQNMRQGTCFVEEYYME 891 Query: 937 FLRLQVRCNLAENEDQQVARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVR 1104 + +R + E+E+Q +AR++ GLN I+ + ++ Q A K E V+ Sbjct: 892 MEKAMIRAKVKEDEEQTMARFLAGLNHPIKHIVNFHTYNTVVQLVHQATKAEHQVQ 1059 Score = 58.8 bits (122), Expect(4) = 1e-34 Identities = 24/43 (55%), Positives = 34/43 (79%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELL 2180 L PI+GI++ IDLIPGASLPN P R +P+E ++++V+ELL Sbjct: 2261 LPPIRGIEHQIDLIPGASLPNHPPYRTNPEETKEIQRQVQELL 2389 Score = 54.2 bits (112), Expect(4) = 1e-34 Identities = 20/51 (39%), Positives = 28/51 (54%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIIILP 1842 Y V CD+V M H+LL RPWQ+D H G + Y W ++ I++ P Sbjct: 1768 YCDTVECDVVPMTVCHLLLGRPWQYDRAVQHDGCANQYKLRWKEKDIVLRP 1920 Score = 37.3 bits (75), Expect(4) = 1e-34 Identities = 14/33 (42%), Positives = 23/33 (69%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKL 1585 +K V+GKVCK++ID +C +L S+++ L L Sbjct: 1567 TKAKVDGKVCKVIIDGGSCHSLASKEMCGMLGL 1665 Score = 36.3 bits (73), Expect(2) = 0.070 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -2 / -1 Query: 2186 LLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILNS 2067 L+ +FL+ L + W + W + + C RNQVN + N+ Sbjct: 2395 LV*KFLYLSLNFFCFLWIGTIRWMVGKRCPRNQVNLMFNT 2276 Score = 27.2 bits (53), Expect(2) = 0.070 Identities = 16/53 (30%), Positives = 22/53 (41%) Frame = -2 / -3 Query: 1847 LFGRIMILLLFQMKE*ELSLPLCVVSTSNCQGLTRRTWLVSISTMSHNTFER* 1689 + GR I F + + P C + S C GL I T SH+T +* Sbjct: 1925 VIGRSTISFSFHLNLY*FAQPSCCTARSYCHGLPSSK*HTVIGTTSHSTVSQ* 1767
>LOC_Os07g30430:12007.t02731:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3942 Score = 72.5 bits (152), Expect(6) = 3e-34 Identities = 29/60 (48%), Positives = 43/60 (71%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI H++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1888 KIDHRSGYHQLKIRTGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2067 Score = 60.2 bits (125), Expect(6) = 3e-34 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1896 Score = 48.3 bits (99), Expect(6) = 3e-34 Identities = 23/65 (35%), Positives = 36/65 (55%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + ++ IDLIPG + + RM E D LK+++ EL +KG +R S SP P Sbjct: 1570 MPPDRDTEFIIDLIPGTAPISKRPYRMPVNELDELKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764 Score = 28.6 bits (56), Expect(6) = 3e-34 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = +1 / +1 Query: 1267 CYKCGKEGHISSGCP 1311 C+ CG+ GH ++ CP Sbjct: 871 CFNCGEYGHFANKCP 915 Score = 26.7 bits (52), Expect(6) = 3e-34 Identities = 8/24 (33%), Positives = 18/24 (75%) Frame = +1 / +1 Query: 973 NEDQQVARYINGLNDAIQDRLMMQ 1044 NE++++ ++I GLND ++ ++ Q Sbjct: 523 NEEEKIDKFIEGLNDELRGPMIGQ 594 Score = 24.9 bits (48), Expect(6) = 3e-34 Identities = 10/44 (22%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 817 QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 ++ + F+PA ++ +F+ +GN +V +Y F +L Sbjct: 364 EEFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNHFTQL 495 Score = 35.9 bits (72), Expect = 1.3 Identities = 20/42 (47%), Positives = 23/42 (54%) Frame = -2 / -2 Query: 2363 NNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 N LA LS*S S RG G L+L V + S H+ PSFF Sbjct: 1883 NTLAPLS*SKRSSIRGSGYLFLIVTSFSER*STHILMLPSFF 1758
>LOC_Os04g14000:12004.t01220:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2565 Score = 76.2 bits (160), Expect(5) = 6e-34 Identities = 30/60 (50%), Positives = 45/60 (75%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IRPRD KTA + GL+E+ VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1903 KIDLRSEYHQLKIRPRDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMEYLDK 2082 Score = 62.0 bits (129), Expect(5) = 6e-34 Identities = 21/50 (42%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + K+T++ ++P+PR+D + D L A++F+K+D Sbjct: 1762 LFVKKKDGSMRMCVDYRSLNKVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1911 Score = 44.6 bits (91), Expect(5) = 6e-34 Identities = 20/54 (37%), Positives = 33/54 (61%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISP 2213 + P + I++ IDL+PG + + RM E + LK +++EL KG++R S SP Sbjct: 1585 MPPDRDIEFIIDLMPGTAPISKRPYRMPANELEELKTQIKELQDKGYVRPSSSP 1746 Score = 30.4 bits (60), Expect(5) = 6e-34 Identities = 9/30 (30%), Positives = 14/30 (46%) Frame = +1 / +2 Query: 1222 PKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P T + C+ CG+ GH ++ CP Sbjct: 848 PTPTLAAPRWKRSGSCFNCGEPGHYANNCP 937 Score = 24.0 bits (46), Expect(5) = 6e-34 Identities = 10/34 (29%), Positives = 19/34 (55%) Frame = +1 / +1 Query: 847 FLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 F+PA ++ +F+ +GN +V +Y F +L Sbjct: 385 FVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQL 486 Score = 38.2 bits (77), Expect = 0.27 Identities = 21/47 (44%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S F N LA S*S S RG G L+L V S H+ PSFF Sbjct: 1913 RSIFENTLAPFS*SKRSSIRGSGYLFLMVTLFNER*STHILMLPSFF 1773
>LOC_Os06g23170:12006.t02129:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8330 Score = 71.6 bits (150), Expect(3) = 7e-34 Identities = 28/60 (46%), Positives = 43/60 (71%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++I+P D KTA + G +E++VMPFGL NAP+ FM LMN++ + +L Q Sbjct: 5755 KIDLQSGYHQLKIKPSDIPKTAFHARYGHYEYLVMPFGLINAPAAFMDLMNRIFKPYLDQ 5934 Score = 62.0 bits (129), Expect(3) = 7e-34 Identities = 21/50 (42%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS +CTD + + K+T++ ++P+PR+D + D L R+F+K+D Sbjct: 5614 LFVKKKDGSLRLCTDYRELNKVTIKNKYPLPRIDDLFDQLQGERVFSKID 5763 Score = 50.6 bits (104), Expect(3) = 7e-34 Identities = 24/65 (36%), Positives = 38/65 (58%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 LSP + I++ I+++PG + RM+P E LK +++EL KG IR S+SP P Sbjct: 5437 LSPDREIEFGIEIVPGTTPIYKAPYRMAPVELKELKVQLKELEDKGFIRPSVSPWGAPVL 5616 Query: 2232 HAKER 2246 K++ Sbjct: 5617 FVKKK 5631 Score = 38.2 bits (77), Expect(2) = 7e-06 Identities = 20/39 (51%), Positives = 23/39 (58%) Frame = -3 / -1 Query: 2506 FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 FIK IK GA PNG+T +S P +KAV S GLI Sbjct: 5906 FIKSIKAAGALIKPNGITRYS*CP*RAWKAVLGISLGLI 5790 Score = 33.1 bits (66), Expect(2) = 7e-06 Identities = 20/51 (39%), Positives = 27/51 (52%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFGVSR 2226 +S F + S*SN S G G L+L V ++ SVH + PSFF +R Sbjct: 5765 RSIFEKTRSPCS*SNRSSILGKGYLFLIVTLFSSR*SVHNLRLPSFFLTNR 5613
>LOC_Os01g37440:12001.t03287:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2307 Score = 70.3 bits (147), Expect(6) = 8e-34 Identities = 37/120 (30%), Positives = 64/120 (53%) Frame = +1 / +1 Query: 802 RGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENED 981 R RT* MK ++ RF+P+ + + + Q +G+ SV Y +E + RCNL E ED Sbjct: 613 RPRT*DDMKRTMRSRFVPSYYARDMLNKLQLLRQGSNSVETYYQEMMIALSRCNLQETED 792 Query: 982 QQVARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTRKTTKAPYLPYPHTEGSS 1161 +++R+ GLN I+D L ++ ++++ A K ER V+ R ++ + T S+ Sbjct: 793 ARISRFYGGLNREIRDILEYKEYNTMNRLFHFACKAEREVQGRNKHRSSFAGATSTRQST 972 Score = 53.8 bits (111), Expect(6) = 8e-34 Identities = 16/49 (32%), Positives = 32/49 (65%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIII 1836 Y + CD+V M +V+L RPWQ+D + G+ ++Y F+++ +R+++ Sbjct: 1594 YHDQIECDVVHMQACYVILGRPWQYDREVVFDGRTNTYKFMFDGKRVVL 1740 Score = 41.8 bits (85), Expect(6) = 8e-34 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQTH 1594 SK V G K++IDS +C NL S+++V L L TH Sbjct: 1393 SKVLVKGHTVKMIIDSGSCNNLASEEMVKKLGLTTH 1500 Score = 35.4 bits (71), Expect(6) = 8e-34 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 HP+PY I W MK+T+ P S+G ++ Sbjct: 1504 HPHPYHIQWFNTCGKMKVTRLVKIPFSIGSYH 1599 Score = 27.6 bits (54), Expect(6) = 8e-34 Identities = 13/54 (24%), Positives = 24/54 (44%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK + +F G + LD V+ F +FP++ +V + + + W Sbjct: 424 KVKFTMPSFDGKFEPSVYLDWKLAVEQKFSCYDFPDNKKVKAASSEFTSFASLW 585 Score = 26.7 bits (52), Expect(6) = 8e-34 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +1 / +1 Query: 1267 CYKCGKEGHISSGCPLRK 1320 C++C GHI+ CP R+ Sbjct: 1114 CHRCHGIGHIARDCPNRR 1167 Score = 25.8 bits (50), Expect(3) = 0.53 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 / -1 Query: 1692 IVLAQRKWRVALLGDLHIHTFLDPSNSVGIWM 1597 +V A RK G LH+ T + P N + +WM Sbjct: 1599 MVGAYRKRYFNQAGYLHLTTCIKPLNMIRMWM 1504 Score = 22.1 bits (42), Expect(3) = 0.53 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = -2 / -2 Query: 1796 LSLPLCVVSTSNCQGLTRRTWLVSISTMSHN 1704 L LP S S C G + T I T SH+ Sbjct: 1700 LVLPSKTTSLSYCHGRPKIT*QACICTTSHS 1608 Score = 22.1 bits (42), Expect(3) = 0.53 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = -1 / -2 Query: 1608 GIWMSWV*SFKWFTNFWEIRFSQLQLSITNLHTLPFTVHLLY 1483 G WV + T + QL LSI L PFT LL+ Sbjct: 1514 GCGCGWVVKPSFLTISSLAKLLQLPLSIIILTVWPFTRTLLW 1389
>LOC_Os10g21350:12010.t01624:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4570 Score = 74.4 bits (156), Expect(3) = 1e-33 Identities = 28/60 (46%), Positives = 45/60 (75%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++I+P D KTA + + G +E++VMPFGL+NAP+ FM LMN++ + +L Q Sbjct: 1990 KIDLQSGYHQLKIKPSDIPKTAFRARYGHYEYLVMPFGLTNAPAAFMDLMNRIFKPYLDQ 2169 Score = 64.3 bits (134), Expect(3) = 1e-33 Identities = 22/50 (44%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS +CTD + + K+T++ ++P+PR+D + D L AR+F+K+D Sbjct: 1849 LFVKKKDGSLRLCTDYRELNKVTIKNKYPLPRIDDLFDQLQGARVFSKID 1998 Score = 44.6 bits (91), Expect(3) = 1e-33 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 L P I++ I+++PG S RM+P E LK +++EL KG I S+SP P Sbjct: 1672 LPPD*EIEFGIEIVPGTSPIYKAPYRMAPVELKELKLQLKELEDKGFIHPSVSPWGAPVL 1851 Query: 2232 HAKER 2246 K++ Sbjct: 1852 FVKKK 1866 Score = 36.8 bits (74), Expect(2) = 8e-06 Identities = 20/39 (51%), Positives = 22/39 (56%) Frame = -3 / -3 Query: 2506 FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 FIK IK GA PNG+T +S P KAV S GLI Sbjct: 2141 FIKSIKAAGALVKPNGITRYS*CP*RARKAVLGISLGLI 2025 Score = 34.5 bits (69), Expect(2) = 8e-06 Identities = 21/51 (41%), Positives = 27/51 (52%) Frame = -2 / -3 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFGVSR 2226 +S F A S*SN S G G L+L V ++ SVH + PSFF +R Sbjct: 2000 RSIFEKTRAPCS*SNKSSILGKGYLFLIVTLFSSR*SVHNLKLPSFFLTNR 1848
>LOC_Os11g27050:12011.t02320:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4917 Score = 70.7 bits (148), Expect(3) = 2e-33 Identities = 29/60 (48%), Positives = 43/60 (71%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR RD KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1888 KIDLRSGYHQLKIRTRDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2067 Score = 60.2 bits (125), Expect(3) = 2e-33 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSIRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1896 Score = 51.9 bits (107), Expect(3) = 2e-33 Identities = 24/65 (36%), Positives = 38/65 (58%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG +L + RM E + LK+++ EL +KG +R S SP P Sbjct: 1570 MPPDRDIEFIIDLIPGTALISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764 Score = 36.8 bits (74), Expect = 0.70 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA LS*S S RG G L+L V + S H+ PSFF Sbjct: 1898 RSILENTLAPLS*SKRSSIRGSGYLFLIVTSFSER*STHILMLPSFF 1758
>LOC_Os08g12000:12008.t01080:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4891 Score = 70.3 bits (147), Expect(5) = 6e-33 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1882 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2061 Score = 53.8 bits (111), Expect(5) = 6e-33 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1741 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 1890 Score = 51.5 bits (106), Expect(5) = 6e-33 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1564 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 1737 Score = 32.7 bits (65), Expect(5) = 6e-33 Identities = 11/35 (31%), Positives = 17/35 (48%) Frame = +1 / +1 Query: 1207 VKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 V P+ Q K + ++ C+ CG GH + CP Sbjct: 886 VANPVQNQPVRKEQGSKPGVCFNCGDPGHYADKCP 990 Score = 29.5 bits (58), Expect(5) = 6e-33 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = +1 / +1 Query: 781 RMLRGEPRGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 R R E T Q+ K +PA + +F+ +G+RSV +Y +F RL Sbjct: 358 RQGRAEGEPITWQEFTAAFKKMHIPAGVVALKKREFRALNQGSRSVTEYLHDFNRL 525 Score = 43.7 bits (89), Expect(2) = 5e-05 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -3 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 2039 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 1914 Score = 31.8 bits (63), Expect(2) = 5e-05 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -3 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 1736 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGLVPGTKSI 1593 Score = 43.2 bits (88), Expect = 0.008 Identities = 20/48 (41%), Positives = 30/48 (62%) Frame = -2 / -2 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I +SK H+ F+Q S +GG +I +D+ LM S Sbjct: 2043 KHLVHQIHEKGWGISKSK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 1900
>LOC_Os05g19410:12005.t01707:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4575 Score = 70.7 bits (148), Expect(3) = 1e-32 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 55.6 bits (115), Expect(3) = 1e-32 Identities = 25/60 (41%), Positives = 38/60 (63%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG +L + RM E +K++V+E LQKG+IR S+SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTALIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSMSPWGAP 1878 Score = 53.8 bits (111), Expect(3) = 1e-32 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 42.8 bits (87), Expect(3) = 6e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 28.6 bits (56), Expect(3) = 6e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1893 Score = 27.2 bits (53), Expect(3) = 6e-09 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L R+ PFCN SST Sbjct: 1877 GAPQGDMLGRIYPFCNCSST 1818 Score = 35.9 bits (72), Expect(2) = 0.75 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 2202 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 2104 Score = 24.9 bits (48), Expect(2) = 0.75 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 +++ LL F+ LL + L +HS + + SR QVN L+ Sbjct: 1851 ADISLL*LFIDLLLDFRQLVGSHSVRPLVDQCSSRYQVNPELD 1723
>LOC_Os11g03250:12011.t00216:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4040 Score = 70.3 bits (147), Expect(3) = 2e-32 Identities = 29/60 (48%), Positives = 43/60 (71%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTAL + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1888 KIDLRSGYHQLKIRTEDIPKTALSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2067 Score = 60.6 bits (126), Expect(3) = 2e-32 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKMFSKID 1896 Score = 48.7 bits (100), Expect(3) = 2e-32 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 1570 MPPNRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764 Score = 35.0 bits (70), Expect(2) = 2.2 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S F N LA LS*S S G G L+L V + S H+ PSFF Sbjct: 1898 RSIFENILAPLS*SKRSSILGSGYLFLIVTSFSDR*STHILMLPSFF 1758 Score = 24.0 bits (46), Expect(2) = 2.2 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -2 / -3 Query: 1559 GR*DSRSCNYQSLICIPYHS 1500 G + + NY S++C P HS Sbjct: 1416 GNFSTSTVNYSSMLC*PIHS 1357
>LOC_Os04g43950:12004.t03935:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 68.4 bits (143), Expect(5) = 2e-32 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1888 KIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2067 Score = 59.7 bits (124), Expect(5) = 2e-32 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFDKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1896 Score = 48.7 bits (100), Expect(5) = 2e-32 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + +++ IDLIPG + + RM E + LK+++ EL QKG +R S SP P Sbjct: 1570 MPPDRDVEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQQKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FDKKK 1764 Score = 32.7 bits (65), Expect(5) = 2e-32 Identities = 11/38 (28%), Positives = 18/38 (47%) Frame = +1 / +1 Query: 1198 PPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P ++ P T A + C+ CG+ GH ++ CP Sbjct: 802 PVALQNRTPTPTLAAPGAKKNVDCFNCGEYGHYANNCP 915 Score = 25.4 bits (49), Expect(5) = 2e-32 Identities = 11/46 (23%), Positives = 24/46 (52%) Frame = +1 / +1 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 T ++ + F+PA ++ +F+ +GN +V +Y +F +L Sbjct: 358 TWEEFTVAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQL 495
>LOC_Os08g23400:12008.t02112:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4452 Score = 68.0 bits (142), Expect(5) = 2e-32 Identities = 29/60 (48%), Positives = 41/60 (68%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D TA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1900 KIDLRSGYHQLRIREEDIPNTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2079 Score = 53.8 bits (111), Expect(5) = 2e-32 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1759 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 1908 Score = 51.5 bits (106), Expect(5) = 2e-32 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1582 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 1755 Score = 31.3 bits (62), Expect(5) = 2e-32 Identities = 10/32 (31%), Positives = 16/32 (50%) Frame = +1 / +1 Query: 1216 PIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P+ Q K + ++ C+ CG GH + CP Sbjct: 913 PVQNQPVRKEQGSKPGVCFNCGDPGHYADKCP 1008 Score = 30.4 bits (60), Expect(5) = 2e-32 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = +1 / +1 Query: 781 RMLRGEPRGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 R R E T Q+ + K +PA + +F+ +G+RSV +Y +F RL Sbjct: 376 RQGRAEGEPITWQEFTAVFKKTHIPAGVVALKKREFRALNQGSRSVTEYLHDFNRL 543 Score = 43.7 bits (89), Expect(2) = 5e-05 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 2057 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 1932 Score = 31.8 bits (63), Expect(2) = 5e-05 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 1754 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGLVPGTKSI 1611 Score = 42.8 bits (87), Expect = 0.011 Identities = 20/48 (41%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +++ LM S Sbjct: 2061 KHLVHQIHEKGWGISESK*HNGTFEQTIPSCEGGIWYIFLTNSKLMIS 1918
>LOC_Os12g18320:12012.t01682:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4412 Score = 65.7 bits (137), Expect(6) = 2e-32 Identities = 27/60 (45%), Positives = 41/60 (68%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KT + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1887 KIDLRSGYHQLKIRTGDIPKTTFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2066 Score = 57.9 bits (120), Expect(6) = 2e-32 Identities = 19/50 (38%), Positives = 34/50 (68%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDG MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1746 LFVKKKDGCIRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1895 Score = 48.7 bits (100), Expect(6) = 2e-32 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 1569 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1748 Query: 2232 HAKER 2246 K++ Sbjct: 1749 FVKKK 1763 Score = 29.9 bits (59), Expect(6) = 2e-32 Identities = 10/38 (26%), Positives = 17/38 (44%) Frame = +1 / +1 Query: 1198 PPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P ++ P T A + C+ C + GH ++ CP Sbjct: 802 PVAIQNRTPTPTLAAPGAKKNVDCFNCEEYGHYANNCP 915 Score = 27.6 bits (54), Expect(6) = 2e-32 Identities = 12/45 (26%), Positives = 24/45 (53%) Frame = +1 / +1 Query: 973 NEDQQVARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRT 1107 NE++++ ++I GLND ++ ++ Q S ++ E RT Sbjct: 523 NEEEKIDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRT 657 Score = 25.4 bits (49), Expect(6) = 2e-32 Identities = 11/46 (23%), Positives = 23/46 (50%) Frame = +1 / +1 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 T ++ + F+PA ++ +F+ +GN +V +Y F +L Sbjct: 358 TWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQL 495 Score = 38.6 bits (78), Expect(2) = 0.005 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA LS*S S RG G L+L V + S H+ PSFF Sbjct: 1897 RSILENTLAPLS*SKRSSIRGSGYLFLIVTSFSER*STHILMQPSFF 1757 Score = 23.1 bits (44), Expect(2) = 0.005 Identities = 13/50 (26%), Positives = 23/50 (46%) Frame = -2 / -1 Query: 2522 LSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 + + +H++HK + SK H Q + G +IPG + L+ S Sbjct: 2054 IHEHFVHKIHKVCRGVG*SK*HYCELIQSIAR*ERGLGYIPGPNFQLVIS 1905
>LOC_Os05g18480:12005.t01615:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5661 Score = 73.5 bits (154), Expect(3) = 3e-32 Identities = 31/60 (51%), Positives = 43/60 (71%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++R+HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1714 KIDLRSRYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 1893 Score = 53.8 bits (111), Expect(3) = 3e-32 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1573 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 1722 Score = 51.5 bits (106), Expect(3) = 3e-32 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1396 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 1569 Score = 45.5 bits (93), Expect(3) = 3e-09 Identities = 26/53 (49%), Positives = 31/53 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIRI**NLAL*TIL 2354 T FI+ +K GA SPN +T HSN P + KAVF S IR ** L +IL Sbjct: 1871 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIRS**YLERRSIL 1713 Score = 31.8 bits (63), Expect(3) = 3e-09 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S PG KSI Sbjct: 1568 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGFVPGTKSI 1425 Score = 22.6 bits (43), Expect(3) = 3e-09 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 1724 RSILEKTVAPSS*SNRSSILGRGYLFLIVTSFNAR*STHIL*V*SFF 1584 Score = 45.1 bits (92), Expect = 0.002 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 1875 KHLVHQIHEKGWGISESK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 1732
>LOC_Os08g23510:12008.t02123:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4397 Score = 73.0 bits (153), Expect(3) = 3e-32 Identities = 29/60 (48%), Positives = 45/60 (75%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ + Q++IRP D KTA + + GLFE+ V+ FGL+NAP+TFM+LMN+V ++L + Sbjct: 1878 KIDLRSGYFQLKIRPEDIPKTAFRTRYGLFEYTVVSFGLTNAPATFMNLMNKVFMEYLDK 2057 Score = 57.9 bits (120), Expect(3) = 3e-32 Identities = 17/50 (34%), Positives = 36/50 (72%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L PK DG+ +C D + + ++T++ ++P+PR+D + D ++ A++F+K+D Sbjct: 1737 LFAPKSDGTLRLCVDYRPLNEVTIKNKYPLPRIDDLFDQMTGAQVFSKID 1886 Score = 47.8 bits (98), Expect(3) = 3e-32 Identities = 23/58 (39%), Positives = 35/58 (60%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PGA+ RM+ E LK++++E L+KG IR S SP P Sbjct: 1560 MPPDRDIEFVIDLVPGATPVAKQPYRMTSDELVELKKQIDEQLEKGFIRHSSSPWGCP 1733 Score = 44.6 bits (91), Expect = 0.003 Identities = 23/46 (50%), Positives = 26/46 (56%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 K +T FIK IKV GA P T +SN P + KAVF S GLI Sbjct: 2050 KYSMKTLFIKFIKVAGALVKPKETTVYSNKP*RVLKAVFGISSGLI 1913
>LOC_Os07g15080:12007.t01371:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5990 Score = 68.4 bits (143), Expect(5) = 3e-32 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 3465 KIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 3644 Score = 60.2 bits (125), Expect(5) = 3e-32 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 3324 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 3473 Score = 49.2 bits (101), Expect(5) = 3e-32 Identities = 23/65 (35%), Positives = 38/65 (58%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK++++EL +KG +R S SP P Sbjct: 3147 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIKELQEKGFVRPSSSPWGAPVL 3326 Query: 2232 HAKER 2246 K++ Sbjct: 3327 FVKKK 3341 Score = 32.7 bits (65), Expect(5) = 3e-32 Identities = 11/38 (28%), Positives = 18/38 (47%) Frame = +1 / +3 Query: 1198 PPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P ++ P T A + C+ CG+ GH ++ CP Sbjct: 2379 PVALQNRTPTPTLAAPGAKKNVDCFNCGEYGHYANNCP 2492 Score = 25.8 bits (50), Expect(5) = 3e-32 Identities = 11/46 (23%), Positives = 24/46 (52%) Frame = +1 / +3 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 T ++ + F+PA ++ +F+ +GN +V +Y +F +L Sbjct: 1935 TWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQL 2072
>LOC_Os12g02010:12012.t00098:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2304 Score = 66.6 bits (139), Expect(6) = 3e-32 Identities = 34/103 (33%), Positives = 57/103 (55%) Frame = +1 / +1 Query: 802 RGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENED 981 R RT MK ++ RF+P+ + + + Q +G+ SV Y +E + RCNL E ED Sbjct: 613 RPRTWDDMKRTMRSRFVPSYYARDMLNKLQLLRQGSNSVETYYQEMMIALSRCNLQETED 792 Query: 982 QQVARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTR 1110 +++R+ GLN I+D L ++ ++++ A K ER V+ R Sbjct: 793 ARISRFYGGLNREIRDILEYKEYNTMNRLFHFACKAEREVQGR 921 Score = 52.4 bits (108), Expect(6) = 3e-32 Identities = 16/49 (32%), Positives = 31/49 (63%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIII 1836 Y + CD+V M V+L RPWQ+D + G+ ++Y F+++ +R+++ Sbjct: 1594 YHDQIECDVVHMQACSVILGRPWQYDREVVFDGRTNTYKFMFDGKRVVL 1740 Score = 41.8 bits (85), Expect(6) = 3e-32 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQTH 1594 SK V G K++IDS +C NL S+++V L L TH Sbjct: 1393 SKVLVKGHTVKMIIDSGSCNNLASEEMVKKLGLTTH 1500 Score = 35.4 bits (71), Expect(6) = 3e-32 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 HP+PY I W MK+T+ P S+G ++ Sbjct: 1504 HPHPYHIQWFNTCGKMKVTRLVKIPFSIGSYH 1599 Score = 27.2 bits (53), Expect(6) = 3e-32 Identities = 13/54 (24%), Positives = 24/54 (44%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK + +F G + LD V+ F +FP++ +V + + + W Sbjct: 424 KVKFTMPSFDGKFEPSVYLDWELAVEQKFSCYDFPDNKKVKAASSEFTSFASLW 585 Score = 26.7 bits (52), Expect(6) = 3e-32 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +1 / +1 Query: 1267 CYKCGKEGHISSGCPLRK 1320 C++C GHI+ CP R+ Sbjct: 1114 CHRCHGIGHIARDCPNRR 1167 Score = 25.8 bits (50), Expect(3) = 0.054 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 / -1 Query: 1692 IVLAQRKWRVALLGDLHIHTFLDPSNSVGIWM 1597 +V A RK G LH+ T + P N + +WM Sbjct: 1599 MVGAYRKRYFNQAGYLHLTTCIKPLNMIRMWM 1504 Score = 25.4 bits (49), Expect(3) = 0.054 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 / -1 Query: 1594 MGLKL*MVHQLLGDKILAVATINH*FAYLTIHRAFAL 1484 MG + ++ L I+A +TIN+ F + H+ FAL Sbjct: 1500 MGSQAKLLDHLFTC*IVATSTINNHFDGMAFHKNFAL 1390 Score = 22.6 bits (43), Expect(3) = 0.054 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = -2 / -2 Query: 1796 LSLPLCVVSTSNCQGLTRRTWLVSISTMSHN 1704 L LP S S C G + T I T SH+ Sbjct: 1700 LVLPSKTTSLSYCHGRPKITEQACICTTSHS 1608
>LOC_Os01g64070:12001.t05775:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6275 Score = 69.3 bits (145), Expect(3) = 4e-32 Identities = 28/60 (46%), Positives = 43/60 (71%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 3464 KIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMEYLDK 3643 Score = 60.2 bits (125), Expect(3) = 4e-32 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 3323 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 3472 Score = 48.7 bits (100), Expect(3) = 4e-32 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 3146 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 3325 Query: 2232 HAKER 2246 K++ Sbjct: 3326 FVKKK 3340
>LOC_Os07g20330:12007.t01838:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 4413 Score = 69.3 bits (145), Expect(3) = 4e-32 Identities = 28/60 (46%), Positives = 43/60 (71%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1888 KIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMEYLDK 2067 Score = 60.2 bits (125), Expect(3) = 4e-32 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1896 Score = 48.7 bits (100), Expect(3) = 4e-32 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 1570 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764
>LOC_Os09g06820:12009.t00478:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2902 Score = 72.5 bits (152), Expect(3) = 4e-32 Identities = 30/60 (50%), Positives = 43/60 (71%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VMPFGL+NAP+ FM+LMN+V ++L + Sbjct: 1814 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMPFGLTNAPAFFMNLMNKVFMEYLDK 1993 Score = 54.2 bits (112), Expect(3) = 4e-32 Identities = 24/58 (41%), Positives = 38/58 (65%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG +L + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1496 MPPKRDIEFRIDLVPGTNLIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1669 Score = 51.5 bits (106), Expect(3) = 4e-32 Identities = 16/50 (32%), Positives = 32/50 (64%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L + +F+K+D Sbjct: 1673 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGSTVFSKID 1822 Score = 47.3 bits (97), Expect(2) = 4e-06 Identities = 22/41 (53%), Positives = 25/41 (60%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP G+T HSNNP + KAV S LI Sbjct: 1971 TLFIKFMKKAGALVSPKGITVHSNNPYLVVKAVLGISSSLI 1849 Score = 24.9 bits (48), Expect(2) = 4e-06 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S + LS*SN S G G L+L V + S H+ SFF Sbjct: 1824 RSILEKTVEPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWVWSFF 1684 Score = 34.5 bits (69), Expect(2) = 3.0 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 1975 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 1838 Score = 23.5 bits (45), Expect(2) = 3.0 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = -2 / -3 Query: 254 CSQRGQKELVWINGALIPLEATQSCGGATPPCC 156 CSQ G E++W + L L A S ++ C Sbjct: 104 CSQPGYNEVLWSSNILSNLWAPFSLSQSSLASC 6
>LOC_Os11g02590:12011.t00152:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2304 Score = 66.6 bits (139), Expect(6) = 4e-32 Identities = 34/103 (33%), Positives = 57/103 (55%) Frame = +1 / +1 Query: 802 RGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENED 981 R RT MK ++ RF+P+ + + + Q +G+ SV Y +E + RCNL E ED Sbjct: 613 RPRTWDDMKRTMRSRFVPSYYARDMLNKLQLLRQGSNSVETYYQEMMIALSRCNLQETED 792 Query: 982 QQVARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTR 1110 +++R+ GLN I+D L ++ ++++ A K ER V+ R Sbjct: 793 ARISRFYGGLNREIRDILEYKEYNTMNRLFHFACKAEREVQGR 921 Score = 52.4 bits (108), Expect(6) = 4e-32 Identities = 16/49 (32%), Positives = 31/49 (63%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIII 1836 Y + CD+V M V+L RPWQ+D + G+ ++Y F+++ +R+++ Sbjct: 1594 YHDQIECDVVHMQACSVILGRPWQYDREVVFDGRTNTYKFMFDGKRVVL 1740 Score = 41.8 bits (85), Expect(6) = 4e-32 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQTH 1594 SK V G K++IDS +C NL S+++V L L TH Sbjct: 1393 SKVLVKGHTVKMIIDSGSCNNLASEEMVKKLGLTTH 1500 Score = 35.0 bits (70), Expect(6) = 4e-32 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 HP+PY I W MK+T+ P S+G ++ Sbjct: 1504 HPHPYHIQWFHTCGKMKVTRLVKIPFSIGSYH 1599 Score = 27.2 bits (53), Expect(6) = 4e-32 Identities = 13/54 (24%), Positives = 24/54 (44%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK + +F G + LD V+ F +FP++ +V + + + W Sbjct: 424 KVKFTMPSFDGKFEPSVYLDWELAVEQKFSCYDFPDNKKVKAASSEFTSFASLW 585 Score = 26.7 bits (52), Expect(6) = 4e-32 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +1 / +1 Query: 1267 CYKCGKEGHISSGCPLRK 1320 C++C GHI+ CP R+ Sbjct: 1114 CHRCHGIGHIARDCPNRR 1167 Score = 25.8 bits (50), Expect(3) = 0.096 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 / -1 Query: 1692 IVLAQRKWRVALLGDLHIHTFLDPSNSVGIWM 1597 +V A RK G LH+ T + P N + +WM Sbjct: 1599 MVGAYRKRYFNQAGYLHLTTCMKPLNMIRMWM 1504 Score = 24.4 bits (47), Expect(3) = 0.096 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -3 / -1 Query: 1594 MGLKL*MVHQLLGDKILAVATINH*FAYLTIHRAFAL 1484 MG + ++ L I+A TIN+ F + H+ FAL Sbjct: 1500 MGSQAKLLDHLFTC*IVATPTINNHFDGMAFHKNFAL 1390 Score = 22.6 bits (43), Expect(3) = 0.096 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = -2 / -2 Query: 1796 LSLPLCVVSTSNCQGLTRRTWLVSISTMSHN 1704 L LP S S C G + T I T SH+ Sbjct: 1700 LVLPSKTTSLSYCHGRPKITEQACICTTSHS 1608
>LOC_Os01g72030:12001.t06493:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2304 Score = 66.6 bits (139), Expect(6) = 4e-32 Identities = 34/103 (33%), Positives = 57/103 (55%) Frame = +1 / +1 Query: 802 RGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRLQVRCNLAENED 981 R RT MK ++ RF+P+ + + + Q +G+ SV Y +E + RCNL E ED Sbjct: 613 RPRTWDDMKRTMRSRFVPSYYARDMLNKLQLLRQGSNSVETYYQEMMIALSRCNLQETED 792 Query: 982 QQVARYINGLNDAIQDRLMMQQIWSIDQAQALALKTERFVRTR 1110 +++R+ GLN I+D L ++ ++++ A K ER V+ R Sbjct: 793 ARISRFYGGLNREIRDILEYKEYNTMNRLFHFACKAEREVQGR 921 Score = 52.4 bits (108), Expect(6) = 4e-32 Identities = 16/49 (32%), Positives = 31/49 (63%) Frame = +1 / +1 Query: 1690 YRSNVLCDIVDMDTNHVLLVRPWQFDVDTTHKGKESSYSFIWNKRRIII 1836 Y + CD+V M V+L RPWQ+D + G+ ++Y F+++ +R+++ Sbjct: 1594 YHDQIECDVVHMQACSVILGRPWQYDREVVFDGRTNTYKFMFDGKRVVL 1740 Score = 41.8 bits (85), Expect(6) = 4e-32 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = +2 / +1 Query: 1487 SKCTVNGKVCKLVIDSCNCENLISQKLVNHLKLQTH 1594 SK V G K++IDS +C NL S+++V L L TH Sbjct: 1393 SKVLVKGHTVKMIIDSGSCNNLASEEMVKKLGLTTH 1500 Score = 35.0 bits (70), Expect(6) = 4e-32 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 / +1 Query: 1597 HPNPYTIGWIKKGVNMKITKQCNPPLSLGKHY 1692 HP+PY I W MK+T+ P S+G ++ Sbjct: 1504 HPHPYHIQWFHTCGKMKVTRLVKIPFSIGSYH 1599 Score = 27.2 bits (53), Expect(6) = 4e-32 Identities = 13/54 (24%), Positives = 24/54 (44%) Frame = +1 / +1 Query: 601 KVKAEIRTFSGDVDIEGCLDLLYEVDTFFEVMEFPEDHRVPLVAYKLKGVGAWW 762 KVK + +F G + LD V+ F +FP++ +V + + + W Sbjct: 424 KVKFTMPSFDGKFEPSVYLDWELAVEQKFSCYDFPDNKKVKAASSEFTSFASLW 585 Score = 26.7 bits (52), Expect(6) = 4e-32 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +1 / +1 Query: 1267 CYKCGKEGHISSGCPLRK 1320 C++C GHI+ CP R+ Sbjct: 1114 CHRCHGIGHIARDCPNRR 1167 Score = 25.8 bits (50), Expect(3) = 0.096 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 / -1 Query: 1692 IVLAQRKWRVALLGDLHIHTFLDPSNSVGIWM 1597 +V A RK G LH+ T + P N + +WM Sbjct: 1599 MVGAYRKRYFNQAGYLHLTTCMKPLNMIRMWM 1504 Score = 24.4 bits (47), Expect(3) = 0.096 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -3 / -1 Query: 1594 MGLKL*MVHQLLGDKILAVATINH*FAYLTIHRAFAL 1484 MG + ++ L I+A TIN+ F + H+ FAL Sbjct: 1500 MGSQAKLLDHLFTC*IVATPTINNHFDGMAFHKNFAL 1390 Score = 22.6 bits (43), Expect(3) = 0.096 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = -2 / -2 Query: 1796 LSLPLCVVSTSNCQGLTRRTWLVSISTMSHN 1704 L LP S S C G + T I T SH+ Sbjct: 1700 LVLPSKTTSLSYCHGRPKITEQACICTTSHS 1608
>LOC_Os11g12060:12011.t01093:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4452 Score = 70.3 bits (147), Expect(5) = 4e-32 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1900 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2079 Score = 53.8 bits (111), Expect(5) = 4e-32 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1759 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 1908 Score = 51.5 bits (106), Expect(5) = 4e-32 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1582 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 1755 Score = 29.5 bits (58), Expect(5) = 4e-32 Identities = 10/32 (31%), Positives = 15/32 (46%) Frame = +1 / +1 Query: 1216 PIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P Q K + ++ C+ CG GH + CP Sbjct: 913 PAQNQPVRKEQGSKPGVCFNCGDPGHYADKCP 1008 Score = 29.0 bits (57), Expect(5) = 4e-32 Identities = 17/56 (30%), Positives = 25/56 (44%) Frame = +1 / +1 Query: 781 RMLRGEPRGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 R R E T Q+ K +PA + +F+ +G+RSV Y +F RL Sbjct: 376 RQGRAEGEPITWQEFTAAFKKTHIPAGVVALKKREFRELNQGSRSVTKYLHDFNRL 543 Score = 45.1 bits (92), Expect(3) = 2e-09 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 2061 KHLVHQIHEKGWGISESK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 1918 Score = 31.8 bits (63), Expect(3) = 2e-09 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 1754 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGLVPGTKSI 1611 Score = 23.5 bits (45), Expect(3) = 2e-09 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 EI L E +LI+ I +G R I +L+ + TH IFL Sbjct: 1911 EIYLGENCSTFQLIKQVINSG*RILILDSNLIQRSIIHTHSLSMIFL 1771 Score = 43.7 bits (89), Expect(2) = 2e-04 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 2057 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 1932 Score = 22.6 bits (43), Expect(2) = 2e-04 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 1910 RSILEKTVAPSS*SNRSSILGRGYLFLIVTSFNAR*STHIL*V*SFF 1770
>LOC_Os05g24680:12005.t02125:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 12234 Score = 70.3 bits (147), Expect(3) = 5e-32 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 6023 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 6202 Score = 55.6 bits (115), Expect(3) = 5e-32 Identities = 18/50 (36%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + K+T++ ++P+PR+D + D L A +F+K+D Sbjct: 5882 IFVEKKDHTQRMCVDYRALNKVTIKNKYPLPRIDDLFDQLEGATVFSKID 6031 Score = 51.9 bits (107), Expect(3) = 5e-32 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 5705 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWAAP 5878 Score = 44.1 bits (90), Expect(3) = 2e-09 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -1 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 6180 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGMSSSRIR 6055 Score = 33.6 bits (67), Expect(3) = 2e-09 Identities = 18/48 (37%), Positives = 22/48 (45%) Frame = -3 / -1 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L R+ PF + SST F + S L PG KSI Sbjct: 5877 GAAHGEVLGRIYPF*SKSSTCFFTSANSLAAILYGLLWMGLVPGTKSI 5734 Score = 22.1 bits (42), Expect(3) = 2e-09 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A +*SN S G G L+L V S H+ SFF Sbjct: 6033 RSILEKTVAPSN*SNRSSILGNGYLFLIVTLFNAR*STHIL*V*SFF 5893 Score = 43.7 bits (89), Expect = 0.006 Identities = 20/48 (41%), Positives = 29/48 (60%) Frame = -2 / -3 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ FKQ S +G ++ +D+ LM S Sbjct: 6184 KHLVHQIHEKGWGISESK*HNGTFKQTIPSCEGSLWYVFLTDSKLMIS 6041
>LOC_Os12g20110:12012.t01854:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6005 Score = 70.3 bits (147), Expect(5) = 6e-32 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 3453 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 3632 Score = 53.8 bits (111), Expect(5) = 6e-32 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3312 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3461 Score = 52.4 bits (108), Expect(5) = 6e-32 Identities = 24/58 (41%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 L P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3135 LPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 3308 Score = 29.5 bits (58), Expect(5) = 6e-32 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = +1 / +3 Query: 781 RMLRGEPRGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 R R E T Q+ K +PA + +F+ +G+RSV +Y +F RL Sbjct: 1929 RQGRAEGEPITWQEFTAAFKKTHIPAGVVALKKREFRALNQGSRSVTEYLHDFNRL 2096 Score = 29.5 bits (58), Expect(5) = 6e-32 Identities = 10/32 (31%), Positives = 15/32 (46%) Frame = +1 / +3 Query: 1216 PIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P Q K + ++ C+ CG GH + CP Sbjct: 2466 PAQNQPVRKEQGSKPVVCFNCGDPGHYADKCP 2561 Score = 45.1 bits (92), Expect(2) = 3e-05 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 3614 KHLVHQIHEKGWGISESK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 3471 Score = 31.8 bits (63), Expect(2) = 3e-05 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 3307 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGLVPGTKSI 3164 Score = 43.7 bits (89), Expect = 0.006 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 3610 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 3485
>LOC_Os12g26860:12012.t02399:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 10781 Score = 72.1 bits (151), Expect(3) = 7e-32 Identities = 30/60 (50%), Positives = 43/60 (71%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++R+HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 517 KIDLRSRYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 696 Score = 52.8 bits (109), Expect(3) = 7e-32 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 376 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 525 Score = 52.4 bits (108), Expect(3) = 7e-32 Identities = 24/58 (41%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V+ELLQKG+IR S SP P Sbjct: 199 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDELLQKGYIRPSSSPWGAP 372 Score = 68.9 bits (144), Expect(3) = 2e-30 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 8421 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 8600 Score = 52.4 bits (108), Expect(3) = 2e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 8280 IFVEKKDHTQRMCMDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 8429 Score = 51.0 bits (105), Expect(3) = 2e-30 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 8103 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 8276 Score = 44.1 bits (90), Expect(3) = 2e-09 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -1 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 674 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 552 Score = 29.5 bits (58), Expect(3) = 2e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -1 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+NSST Sbjct: 371 GAPHGDELGLMYPFCSNSST 312 Score = 26.3 bits (51), Expect(3) = 2e-09 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 527 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 387 Score = 44.1 bits (90), Expect(3) = 6e-09 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 8578 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 8456 Score = 27.6 bits (54), Expect(3) = 6e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S+H+ SFF Sbjct: 8431 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*SIHIL*VWSFF 8291 Score = 26.7 bits (52), Expect(3) = 6e-09 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 8275 GAPHGDELGLMYPFCSKSST 8216 Score = 34.5 bits (69), Expect(2) = 4e-04 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -3 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 678 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 541 Score = 30.9 bits (61), Expect(2) = 4e-04 Identities = 18/65 (27%), Positives = 28/65 (43%) Frame = -2 / -3 Query: 2279 TLMSVHMCQDPSFFGVSRGYRTWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETC 2100 T++ H F + W T S+V L QF++ L + L HS + +C Sbjct: 426 TIVHTHSLSMVFLFHKNNRSSPW**TRSDVSFL*QFIYLPLNFCQLIGCHSIRSLMDRSC 247 Query: 2099 SRNQV 2085 SR Q+ Sbjct: 246 SRYQI 232 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 8582 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 8445
>LOC_Os12g28690:12012.t02579:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 68.4 bits (143), Expect(3) = 7e-32 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1888 KIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2067 Score = 60.2 bits (125), Expect(3) = 7e-32 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1896 Score = 48.7 bits (100), Expect(3) = 7e-32 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 1570 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764 Score = 34.5 bits (69), Expect = 3.4 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = +1 / +1 Query: 1198 PPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P ++ P T A + C+ CGK GH ++ CP Sbjct: 802 PVALQNRTPTPTLAAPGAKKNVDCFNCGKYGHYANNCP 915
>LOC_Os01g19100:12001.t01700:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 4413 Score = 68.4 bits (143), Expect(3) = 7e-32 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1888 KIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2067 Score = 60.2 bits (125), Expect(3) = 7e-32 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLEGAKVFSKID 1896 Score = 48.7 bits (100), Expect(3) = 7e-32 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 1570 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764
>LOC_Os11g19910:12011.t01761:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4414 Score = 66.1 bits (138), Expect(5) = 8e-32 Identities = 27/60 (45%), Positives = 41/60 (68%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+N P+ FM+LMN+V +L + Sbjct: 1888 KIDLRSGYHQLKIRTGDVPKTAFSTRYGLYEFTVMSFGLTNTPAYFMNLMNKVFMDYLDK 2067 Score = 60.2 bits (125), Expect(5) = 8e-32 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1896 Score = 48.7 bits (100), Expect(5) = 8e-32 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 1570 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764 Score = 33.1 bits (66), Expect(5) = 8e-32 Identities = 11/38 (28%), Positives = 18/38 (47%) Frame = +1 / +1 Query: 1198 PPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P ++ P T A + C+ CG+ GH ++ CP Sbjct: 802 PVVIQNRTPTPTLAAPGAKKNVDCFNCGEYGHYANNCP 915 Score = 24.9 bits (48), Expect(5) = 8e-32 Identities = 11/46 (23%), Positives = 23/46 (50%) Frame = +1 / +1 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 T ++ + F+PA ++ +F+ +GN +V +Y F +L Sbjct: 358 TWEEFTAAFQENFVPAAVMRMKKNEFRRMRQGNTTVQEYLNRFTQL 495 Score = 36.8 bits (74), Expect = 0.70 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 / -3 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA LS*S S RG G L+L V + S H+ PSFF Sbjct: 1898 RSILENTLAPLS*SKRSSIRGSGYLFLIVTSFSER*STHILMLPSFF 1758
>LOC_Os08g11960:12008.t01076:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8224 Score = 71.6 bits (150), Expect(3) = 1e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAPS FM+LMN+V ++L + Sbjct: 5673 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPSFFMNLMNKVFMEYLDK 5852 Score = 53.8 bits (111), Expect(3) = 1e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 5532 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 5681 Score = 51.5 bits (106), Expect(3) = 1e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 5355 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAP 5528 Score = 45.1 bits (92), Expect(3) = 4e-10 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -3 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 5834 KHLVHQIHEKGWGICESK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 5691 Score = 31.3 bits (62), Expect(3) = 4e-10 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -1 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 5527 GAPHGEVLGLMYPF*SKSSTCFFTSANSLAAILYGLLWIGLVPGTKSI 5384 Score = 26.3 bits (51), Expect(3) = 4e-10 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -1 / -3 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 EI L E +LI+ I +G R I G+L+ + TH IFL Sbjct: 5684 EIYLGENCSTFQLIKQVINSG*RIFILDGNLIQRSIIHTHSLSMIFL 5544 Score = 45.1 bits (92), Expect(2) = 1e-04 Identities = 22/42 (52%), Positives = 26/42 (61%) Frame = -3 / -1 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GAF SPN +T HSN P + KAVF S IR Sbjct: 5830 TLFIRFMKKDGAFVSPNDITVHSNKPYRVVKAVFGISSSRIR 5705 Score = 22.1 bits (42), Expect(2) = 1e-04 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A +*SN S G G L+L V S H+ SFF Sbjct: 5683 RSILEKTVAPFN*SNRSSILGRGYLFLMVTSFNAR*STHIL*V*SFF 5543 Score = 26.3 bits (51), Expect(2) = 3.1 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 / +1 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWIS 2344 +RK+ L CV ++ R P I+ L+P M C I+ Sbjct: 5542 RRKIILRECVWIIER*MRLPSRINILYPELMTCLIN 5649 Score = 25.4 bits (49), Expect(2) = 3.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 / +1 Query: 2413 KPP*RERKGCLNG*SCHLDSQM 2478 +PP + C N CHLDSQM Sbjct: 5731 RPPSQLGMVCSNVPLCHLDSQM 5796
>LOC_Os07g25270:12007.t02223:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4850 Score = 68.0 bits (142), Expect(3) = 1e-31 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D K A + GLFE+ VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1693 KIDLRSGYHQLRIKEEDIPKIAFTTRYGLFEYTVMSFGLTNAPAFFMNLMNKVFMEYLDK 1872 Score = 56.1 bits (116), Expect(3) = 1e-31 Identities = 24/58 (41%), Positives = 39/58 (67%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG +L + RM+ E + +K++V++LLQKG+IR S SP P Sbjct: 1375 MPPKRDIEFRIDLVPGTTLIHKRPYRMAANELEEVKRQVDDLLQKGYIRPSSSPWGAP 1548 Score = 52.8 bits (109), Expect(3) = 1e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1552 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1701 Score = 38.6 bits (78), Expect(3) = 1e-08 Identities = 19/41 (46%), Positives = 24/41 (58%) Frame = -3 / -1 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK IK GA SP +T +SN+P + KA+ S LI Sbjct: 1850 TLFIKFIKKAGALVSPKDITVYSNSPYRVVKAILGISSSLI 1728 Score = 29.9 bits (59), Expect(3) = 1e-08 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -3 / -1 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSILY*IPFIG 2057 G HG L M PF + SST S S + PG +SIL I +G Sbjct: 1547 GAPHGDELGLMYPF*SKSSTCLLTSSNSLAAILYGRLWIRVVPGTRSILNSISLLG 1380 Score = 29.0 bits (57), Expect(3) = 1e-08 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V L+ S H+ SFF Sbjct: 1703 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSLSAR*STHILWVWSFF 1563 Score = 33.1 bits (66), Expect = 8.8 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -2 / -3 Query: 2510 LIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFI 2403 L+HQVHK + I +SK H+ FKQP S + +I Sbjct: 1848 LVHQVHKESRGIGKSKRHNCIFKQPIPSSKSYLRYI 1741
>LOC_Os08g19760:12008.t01794:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2413 Score = 72.1 bits (151), Expect(3) = 1e-31 Identities = 30/60 (50%), Positives = 43/60 (71%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++R+HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 517 KIDLRSRYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 696 Score = 53.8 bits (111), Expect(3) = 1e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 376 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 525 Score = 51.0 bits (105), Expect(3) = 1e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 199 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 372 Score = 42.8 bits (87), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -3 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 674 TLFIKFMKKAGALVSPKDITVHSNNPYRVVKAVLGISSSLI 552 Score = 27.2 bits (53), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -3 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 527 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWVWSFF 387 Score = 27.2 bits (53), Expect(3) = 2e-08 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = -2 / -2 Query: 2213 WANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQV 2085 W T+SNV L+Q ++ L HS + +CS Q+ Sbjct: 360 WRRTWSNVSFLKQIIYLPLDLC*FIGCHSIRSLMDRSCSWYQI 232 Score = 35.0 bits (70), Expect = 2.5 Identities = 16/30 (53%), Positives = 20/30 (66%) Frame = -2 / -2 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLS 2427 K LIHQVH+ + I +SK H+ FKQP S Sbjct: 678 KHLIHQVHEESGGIGKSKRHNSAFKQPISS 589
>LOC_Os04g06080:12004.t00488:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4434 Score = 70.3 bits (147), Expect(5) = 1e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1882 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2061 Score = 53.8 bits (111), Expect(5) = 1e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1741 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 1890 Score = 51.5 bits (106), Expect(5) = 1e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1564 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 1737 Score = 29.5 bits (58), Expect(5) = 1e-31 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = +1 / +1 Query: 781 RMLRGEPRGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 R R E T Q+ K +PA + +F+ +G+RSV +Y +F RL Sbjct: 358 RQGRAEGEPITWQEFTAAFKKTHIPAGVVALKKREFRALNQGSRSVTEYLHDFNRL 525 Score = 27.6 bits (54), Expect(5) = 1e-31 Identities = 8/24 (33%), Positives = 12/24 (50%) Frame = +1 / +1 Query: 1267 CYKCGKEGHISSGCPLRKFVNTTI 1338 C+ CG GH + CP + V + Sbjct: 946 CFNCGDPGHYADKCPKPRRVKNAL 1017 Score = 43.7 bits (89), Expect(3) = 5e-09 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 2039 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 1914 Score = 33.1 bits (66), Expect(3) = 5e-09 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSILY*IPFIG 2057 G HG +L M PF + SST F + S L PG KSI I +G Sbjct: 1736 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGLVPGTKSIRNSISLLG 1569 Score = 22.1 bits (42), Expect(3) = 5e-09 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A +*SN S G G L+L V S H+ SFF Sbjct: 1892 RSILEKTVAPSN*SNRSSILGRGYLFLIVTSFNAR*STHILWV*SFF 1752 Score = 41.4 bits (84), Expect = 0.029 Identities = 19/48 (39%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I +S+ H+ F+Q S +GG +I +D+ LM S Sbjct: 2043 KHLVHQIHEKGWGISKSE*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 1900
>LOC_Os08g24220:12008.t02192:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5477 Score = 68.9 bits (144), Expect(5) = 1e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4269 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4448 Score = 52.8 bits (109), Expect(5) = 1e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 4128 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 4277 Score = 51.0 bits (105), Expect(5) = 1e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3951 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 4124 Score = 35.9 bits (72), Expect(5) = 1e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +3 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + ++ C+ CG GH S CP Sbjct: 3261 APRPVAAPTQQQPAKREQGSKPGVCFNCGDPGHYSDKCP 3377 Score = 24.9 bits (48), Expect(5) = 1e-31 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +3 / +1 Query: 201 WYQSPVDP 224 WYQSP+DP Sbjct: 832 WYQSPLDP 855 Score = 44.6 bits (91), Expect(2) = 8e-06 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 4426 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGMSSSLI 4304 Score = 26.7 bits (52), Expect(2) = 8e-06 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V S H+ SFF Sbjct: 4279 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFNAR*STHILWV*SFF 4139
>LOC_Os10g18200:12010.t01372:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6359 Score = 70.7 bits (148), Expect(3) = 1e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3807 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 3986 Score = 53.8 bits (111), Expect(3) = 1e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3666 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3815 Score = 51.9 bits (107), Expect(3) = 1e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +3 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3483 TTMPPKRDIEFRIDLVPGTASIHKRPYRMGASELAEVKKQVDEQLQKGYIRPSTSPWGAP 3662 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3979 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3842 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3661 GAPQGDVLGRMYPFCNCSST 3602 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3817 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 3677 Score = 35.9 bits (72), Expect = 1.3 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 3986 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 3888
>LOC_Os11g22550:12011.t01925:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5804 Score = 70.3 bits (147), Expect(3) = 1e-31 Identities = 30/60 (50%), Positives = 43/60 (71%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L++ Sbjct: 1869 KIDLRSGYHQLRIREEDIPKTAFTTQYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLNK 2048 Score = 54.2 bits (112), Expect(3) = 1e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1728 IFVEKKDHTQRMCVDYRTLNEVTIKNKYPLPRIDDLFDQLEGATIFSKID 1877 Score = 51.9 bits (107), Expect(3) = 1e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1551 MPPKRDIEFQIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 1724 Score = 45.5 bits (93), Expect(3) = 2e-06 Identities = 22/42 (52%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FIK +K GA SPN +T HSN P + KAVF S IR Sbjct: 2026 TLFIKFMKKAGALVSPNDITVHSNKPYCVVKAVFGISSSRIR 1901 Score = 30.9 bits (61), Expect(3) = 2e-06 Identities = 19/56 (33%), Positives = 24/56 (42%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSILY*IPFIG 2057 G HG +L + PF + SST F + S L PG KSI I +G Sbjct: 1723 GAPHGEVLGLIYPFWSKSSTCLFTSANSLAAIL*GLLWIGLVPGTKSIWNSISLLG 1556 Score = 26.7 bits (52), Expect(3) = 2e-06 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 / -2 Query: 1281 TTFIALWAFICLTLTTSLLRDGSFYLWWSGLFF 1183 TT A WA +T T G+ L+W+G F Sbjct: 1090 TTSGAFWASAAVT*LTRAFGAGALELFWTGAVF 992 Score = 34.1 bits (68), Expect = 4.7 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K +HQVH+ I ESK H+ F+Q L +G +I +D+ L+ S Sbjct: 2030 KHFVHQVHEKGRGISESKRHNGTFEQTILCCKGSLWYILLTDSKLVIS 1887
>LOC_Os03g23780:12003.t02073:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5625 Score = 70.3 bits (147), Expect(3) = 1e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 3073 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 3252 Score = 53.8 bits (111), Expect(3) = 1e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 2932 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3081 Score = 52.4 bits (108), Expect(3) = 1e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 2755 MPPKRDIEFRIDLVPGTNPSHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAP 2928 Score = 41.8 bits (85), Expect(3) = 2e-07 Identities = 20/42 (47%), Positives = 24/42 (57%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA PN +T HSN P + KAVF S IR Sbjct: 3230 TLFIRFMKKAGALVRPNDITVHSNKPYRVVKAVFGMSSSRIR 3105 Score = 29.5 bits (58), Expect(3) = 2e-07 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L + PF + SST F + S L PG KSI Sbjct: 2927 GAPHGEVLGLIYPF*SKSSTCFFTSANSLAAILYGLLWLGLVPGTKSI 2784 Score = 22.1 bits (42), Expect(3) = 2e-07 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A +*SN S G G L+L V S H+ SFF Sbjct: 3083 RSILEKTVAPFN*SNRSSILGRGYLFLIVTSFNAR*STHIL*V*SFF 2943 Score = 40.0 bits (81), Expect = 0.075 Identities = 18/48 (37%), Positives = 29/48 (60%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K +HQVH+ W I E+K H+ F+Q S +GG ++ +++ LM S Sbjct: 3234 KHFVHQVHEKGWGISETKRHNGTFEQTIPSCEGGLWYVFLTNSKLMIS 3091
>LOC_Os04g22980:12004.t02026:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5082 Score = 68.9 bits (144), Expect(3) = 1e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 2542 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2721 Score = 54.2 bits (112), Expect(3) = 1e-31 Identities = 24/58 (41%), Positives = 38/58 (65%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG +L + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 2224 MPPKRDIEFRIDLVPGTTLIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 2397 Score = 53.3 bits (110), Expect(3) = 1e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 2401 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATIFSKID 2550 Score = 44.1 bits (90), Expect(2) = 1e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2699 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 2577 Score = 26.3 bits (51), Expect(2) = 1e-05 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = -2 / -2 Query: 2357 LAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +A LS*SN S G G L+L V + S H+ SFF Sbjct: 2531 VAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWVWSFF 2412 Score = 34.5 bits (69), Expect(2) = 0.25 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + ++ C+ CG GH + CP Sbjct: 1534 APRPVAAPTQQQPAKREQGSKPVVCFNCGDPGHYADKCP 1650 Score = 28.1 bits (55), Expect(2) = 0.25 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +2 / +3 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 +V M + WT +C ++L+ LDE Sbjct: 2625 IVRMYCYVFWTYQCPRFLHELDE 2693
>LOC_Os05g16600:12005.t01430:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4578 Score = 71.2 bits (149), Expect(3) = 1e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2026 KIDLRSGYHQLRIREEDISKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2205 Score = 53.8 bits (111), Expect(3) = 1e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1885 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2034 Score = 51.5 bits (106), Expect(3) = 1e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1702 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1881 Score = 43.7 bits (89), Expect(3) = 6e-10 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2198 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFEISSSRI 2061 Score = 29.9 bits (59), Expect(3) = 6e-10 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1880 GAPQGDVLGRMYPFCNCSST 1821 Score = 28.6 bits (56), Expect(3) = 6e-10 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2036 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1896 Score = 35.9 bits (72), Expect(2) = 0.42 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 2205 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 2107 Score = 25.8 bits (50), Expect(2) = 0.42 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 1854 ADVSLL*LFINLLLDFRQLVGSHSVRSLVDRCSSRYQVNPELD 1726
>LOC_Os04g03490:12004.t00239:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4453 Score = 71.2 bits (149), Expect(3) = 1e-31 Identities = 31/60 (51%), Positives = 43/60 (71%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL++ Sbjct: 1838 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLNK 2017 Score = 53.8 bits (111), Expect(3) = 1e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1697 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 1846 Score = 51.5 bits (106), Expect(3) = 1e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +2 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1514 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1693 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2010 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 1873 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1692 GAPQGDVLGRMYPFCNCSST 1633 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 1848 RSILENTVAPFN*SNRSSILGKGYLFLIVTSLSAR*STHILLVLSFF 1708 Score = 35.0 bits (70), Expect = 2.5 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 1999 KHLVHQIHEEGRCISESERHNCAFEQP 1919
>LOC_Os02g34450:12002.t03084:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 68.4 bits (143), Expect(3) = 1e-31 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1888 KIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2067 Score = 60.2 bits (125), Expect(3) = 1e-31 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1896 Score = 47.8 bits (98), Expect(3) = 1e-31 Identities = 22/65 (33%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + +K+++ EL +KG +R S SP P Sbjct: 1570 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEEIKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764
>LOC_Os12g26790:12012.t02392:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 67.5 bits (141), Expect(3) = 1e-31 Identities = 28/60 (46%), Positives = 41/60 (68%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+ IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1888 KIDLRSGYHQLNIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2067 Score = 60.2 bits (125), Expect(3) = 1e-31 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1896 Score = 48.7 bits (100), Expect(3) = 1e-31 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 1570 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764
>LOC_Os07g26220:12007.t02318:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4404 Score = 67.5 bits (141), Expect(3) = 1e-31 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1888 KIDLRSGYHQLKIRTGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2067 Score = 60.2 bits (125), Expect(3) = 1e-31 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1896 Score = 48.7 bits (100), Expect(3) = 1e-31 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 1570 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764 Score = 39.6 bits (80), Expect = 0.10 Identities = 22/47 (46%), Positives = 26/47 (55%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S F N LA LS*S S RG G L+L V + S H+ PSFF Sbjct: 1898 RSIFENTLAPLS*SKRSSIRGSGYLFLIVTSFSER*STHILMLPSFF 1758
>LOC_Os11g38820:12011.t03425:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5614 Score = 66.6 bits (139), Expect(5) = 1e-31 Identities = 26/53 (49%), Positives = 38/53 (71%) Frame = +3 / +2 Query: 2376 FHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 3479 YHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 3637 Score = 60.2 bits (125), Expect(5) = 1e-31 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 3317 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 3466 Score = 48.3 bits (99), Expect(5) = 1e-31 Identities = 22/65 (33%), Positives = 37/65 (56%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + +++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 3140 MPPDRDVEFIIDLIPGTAPISKRPYRMPVNELEELKRQIRELQEKGFVRPSSSPWGAPVL 3319 Query: 2232 HAKER 2246 K++ Sbjct: 3320 FVKKK 3334 Score = 32.7 bits (65), Expect(5) = 1e-31 Identities = 11/38 (28%), Positives = 18/38 (47%) Frame = +1 / +2 Query: 1198 PPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P ++ P T A + C+ CG+ GH ++ CP Sbjct: 2372 PVALQNRTPTPTLAAPGAKKNVDCFNCGEYGHYANNCP 2485 Score = 25.8 bits (50), Expect(5) = 1e-31 Identities = 11/46 (23%), Positives = 24/46 (52%) Frame = +1 / +2 Query: 811 T*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 T ++ + F+PA ++ +F+ +GN +V +Y +F +L Sbjct: 1928 TWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQL 2065
>LOC_Os11g10160:12011.t00908:unspliced-genomic hypothetical protein| Length = 13171 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / -3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 6479 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 6300 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / -3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 6620 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 6471 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / -3 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 6803 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 6624 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / +1 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 6307 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 6444 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / +1 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 6625 GAPQGDVLGRMYPFCNCSST 6684 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / +1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 6469 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 6609 Score = 35.9 bits (72), Expect = 1.3 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / +3 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 6300 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 6398
>LOC_Os04g12210:12004.t01045:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 11751 Score = 69.8 bits (146), Expect(3) = 2e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 9199 KIDLRSGYHQLRIKEEDILKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 9378 Score = 55.1 bits (114), Expect(3) = 2e-31 Identities = 18/50 (36%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD +* MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 9058 IFVEKKDHT*RMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 9207 Score = 51.0 bits (105), Expect(3) = 2e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 8881 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 9054 Score = 44.6 bits (91), Expect(2) = 3e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 9356 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLSISSSLI 9234 Score = 24.4 bits (47), Expect(2) = 3e-05 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V + S H+ SFF Sbjct: 9209 RSILEKTVAPFS*SNKSSILGSGYLFLIVTSFSAR*STHIL*V*SFF 9069
>LOC_Os03g48990:12003.t04249:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8248 Score = 68.9 bits (144), Expect(3) = 2e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4275 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4454 Score = 54.2 bits (112), Expect(3) = 2e-31 Identities = 24/58 (41%), Positives = 38/58 (65%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P +GI++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3957 MPPKRGIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 4130 Score = 52.8 bits (109), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 4134 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 4283 Score = 44.1 bits (90), Expect(2) = 7e-06 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -1 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 4432 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 4310 Score = 27.2 bits (53), Expect(2) = 7e-06 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 4285 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWV*SFF 4145 Score = 31.8 bits (63), Expect(2) = 1.7 Identities = 12/49 (24%), Positives = 21/49 (42%) Frame = +1 / +3 Query: 1165 DHTNRVEEKTAPPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 +H AP V +Q + + + ++ C+ CG GH + CP Sbjct: 3237 NHAGNNIRNQAPRPVAASTQQQPAKREQGSKPVVCFNCGDPGHYADKCP 3383 Score = 28.6 bits (56), Expect(2) = 1.7 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +2 / +2 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 VV M + WT +C ++L+ LDE Sbjct: 4358 VVRMYCYVFWTYQCPRFLHELDE 4426 Score = 33.1 bits (66), Expect = 8.8 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = -2 / -3 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ L+ Sbjct: 4436 KHLIHQVHEESGGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLV 4299
>LOC_Os07g43630:12007.t04008:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5949 Score = 68.9 bits (144), Expect(5) = 2e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4591 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4770 Score = 52.8 bits (109), Expect(5) = 2e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 4450 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 4599 Score = 51.0 bits (105), Expect(5) = 2e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 4273 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 4446 Score = 35.9 bits (72), Expect(5) = 2e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + K + ++ C+ CG GH + CP Sbjct: 3583 APRPVAAPTQQQPAKKEQGSKPGVCFNCGDPGHYADKCP 3699 Score = 24.9 bits (48), Expect(5) = 2e-31 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +3 / +1 Query: 201 WYQSPVDP 224 WYQSP+DP Sbjct: 1165 WYQSPLDP 1188 Score = 44.1 bits (90), Expect(2) = 8e-06 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 4748 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 4626 Score = 27.2 bits (53), Expect(2) = 8e-06 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 4601 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWVWSFF 4461 Score = 34.1 bits (68), Expect = 4.7 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQ+H+ + I +SK H+ FKQP S + +I D+ L+ Sbjct: 4752 KHLIHQIHEESRGIGKSKRHNSTFKQPIPSGKSCLRYIFLFDSQLV 4615
>LOC_Os05g17630:12005.t01532:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7011 Score = 70.3 bits (147), Expect(3) = 2e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4459 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4638 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 4318 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 4467 Score = 51.9 bits (107), Expect(3) = 2e-31 Identities = 24/58 (41%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++VE+LLQKG+IR S SP P Sbjct: 4141 MPPKREIEFRIDLVPGTNPIHKRPYRMAANELVEVKRQVEDLLQKGYIRPSTSPWGAP 4314 Score = 45.1 bits (92), Expect(2) = 1e-05 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 4620 KHLVHQIHEKGWGISESK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 4477 Score = 33.1 bits (66), Expect(2) = 1e-05 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSILY*IPFIG 2057 G HG +L M PF + SST F + S L PG KSI I +G Sbjct: 4313 GAPHGEVLGLMYPF*SKSSTCLFTSTNSLAAILYGLLWIGLVPGTKSIRNSISLLG 4146 Score = 43.7 bits (89), Expect = 0.006 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 4616 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 4491
>LOC_Os01g36360:12001.t03184:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6378 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3826 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 4005 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3685 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3834 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3502 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 3681 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3998 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3861 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3680 GAPQGDVLGRMYPFCNCSST 3621 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3836 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 3696 Score = 35.9 bits (72), Expect(2) = 0.75 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 4005 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 3907 Score = 25.4 bits (49), Expect(2) = 0.75 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 3654 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 3526
>LOC_Os09g21640:12009.t01898:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6373 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3821 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 4000 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3680 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3829 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +2 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3497 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 3676 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3993 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3856 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3675 GAPQGDVLGRMYPFCNCSST 3616 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3831 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 3691 Score = 35.9 bits (72), Expect = 1.3 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 4000 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 3902
>LOC_Os01g71530:12001.t06447:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6366 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3814 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 3993 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3673 IFVEKKDKTKRMCVDYRTLNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3822 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3490 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 3669 Score = 42.8 bits (87), Expect(3) = 4e-10 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3986 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3849 Score = 29.9 bits (59), Expect(3) = 4e-10 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A S*SN S G G L+L V L+ S H+ SFF Sbjct: 3824 RSILENTVAPFS*SNRSSILGKGYLFLIVTSLSVR*STHILLVLSFF 3684 Score = 29.9 bits (59), Expect(3) = 4e-10 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3668 GAPQGDVLGRMYPFCNCSST 3609 Score = 35.4 bits (71), Expect(2) = 1.0 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ C+ ES+ H+ F+QP Sbjct: 3993 LV*KFHKHLVHQIHEEGRCVSESERHNCAFEQP 3895 Score = 25.4 bits (49), Expect(2) = 1.0 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 3642 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 3514
>LOC_Os01g01240:12001.t00023:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6366 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3814 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 3993 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3673 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3822 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3490 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGASELAEVKKQVDEQLQKGYIRPSTSPWGAP 3669 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3986 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3849 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3668 GAPQGDVLGRMYPFCNCSST 3609 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3824 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 3684 Score = 35.9 bits (72), Expect(2) = 0.049 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 3993 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 3895 Score = 22.1 bits (42), Expect(2) = 0.049 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ L E S +LI+ I R + GDL+ V H +FL Sbjct: 3825 QVYLREHSSSFQLIKQVINPWQRILVLDGDLIECAVVNAHPLGFVFL 3685
>LOC_Os04g04490:12004.t00335:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6364 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3812 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 3991 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3671 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3820 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +2 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3488 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGASELAEVKKQVDEQLQKGYIRPSTSPWGAP 3667 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3984 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3847 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3666 GAPQGDVLGRMYPFCNCSST 3607 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3822 RSILENTVAPFN*SNRSSILGNGYLFLIVTSLSAR*STHILLVLSFF 3682 Score = 35.0 bits (70), Expect = 2.5 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 3973 KHLVHQIHEEGRCISESERHNCAFEQP 3893
>LOC_Os01g53960:12001.t04813:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6364 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3812 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 3991 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3671 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3820 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +2 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3488 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 3667 Score = 42.8 bits (87), Expect(3) = 4e-10 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3984 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3847 Score = 29.9 bits (59), Expect(3) = 4e-10 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A S*SN S G G L+L V L+ S H+ SFF Sbjct: 3822 RSILENTVAPFS*SNRSSILGKGYLFLIVTSLSAR*STHILLVLSFF 3682 Score = 29.9 bits (59), Expect(3) = 4e-10 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3666 GAPQGDVLGRMYPFCNCSST 3607 Score = 35.4 bits (71), Expect(2) = 1.0 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ C+ ES+ H+ F+QP Sbjct: 3991 LV*KFHKHLVHQIHEEGRCVSESERHNCAFEQP 3893 Score = 25.4 bits (49), Expect(2) = 1.0 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 3640 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 3512
>LOC_Os01g32220:12001.t02801:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6365 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3813 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 3992 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3672 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3821 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +3 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3489 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 3668 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3985 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3848 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3667 GAPQGDVLGRMYPFCNCSST 3608 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3823 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 3683 Score = 35.4 bits (71), Expect = 1.8 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = -2 / -1 Query: 2528 *ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 3986 *KFHKHLVHQIHEEGRCISESERHNCAFEQP 3894
>LOC_Os10g42050:12010.t03433:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6360 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3808 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 3987 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3667 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3816 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3484 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 3663 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3980 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3843 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3662 GAPQGDVLGRMYPFCNCSST 3603 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3818 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 3678 Score = 35.9 bits (72), Expect(2) = 0.74 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 3987 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 3889 Score = 25.4 bits (49), Expect(2) = 0.74 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 3636 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 3508
>LOC_Os05g39740:12005.t03515:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6361 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3809 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 3988 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3668 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3817 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +2 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3485 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGASELAEVKKQVDEQLQKGYIRPSTSPWGAP 3664 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3981 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3844 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3663 GAPQGDVLGRMYPFCNCSST 3604 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3819 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 3679 Score = 35.9 bits (72), Expect(2) = 0.049 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 3988 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 3890 Score = 22.1 bits (42), Expect(2) = 0.049 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ L E S +LI+ I R + GDL+ V H +FL Sbjct: 3820 QVYLREHSSSFQLIKQVINPWQRILVLDGDLIECAVVNAHPLGFVFL 3680
>LOC_Os02g49490:12002.t04533:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6360 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3808 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 3987 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3667 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3816 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3484 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAKVKKQVDEQLQKGYIRPSTSPWGAP 3663 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3980 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3843 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3662 GAPQGDVLGRMYPFCNCSST 3603 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3818 RSILENTVAPFN*SNRSSILGNGYLFLIVTSLSAR*STHILLVLSFF 3678 Score = 35.4 bits (71), Expect(2) = 1.0 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ C+ ES+ H+ F+QP Sbjct: 3987 LV*KFHKHLVHQIHEEGRCVSESERHNCAFEQP 3889 Score = 25.4 bits (49), Expect(2) = 1.0 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 3636 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 3508
>LOC_Os07g16650:12007.t01525:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6074 Score = 68.9 bits (144), Expect(3) = 2e-31 Identities = 30/60 (50%), Positives = 41/60 (68%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+N P+ FM+LMN+V +FL + Sbjct: 3455 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNTPAFFMNLMNKVFMEFLDK 3634 Score = 55.6 bits (115), Expect(3) = 2e-31 Identities = 18/50 (36%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + K+T++ ++P+PR+D + D L A +F+K+D Sbjct: 3314 IFVEKKDKTKRMCVDYRALNKVTIKNKYPLPRIDDLFDQLKGATVFSKID 3463 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +2 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3131 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 3310 Score = 40.9 bits (83), Expect(3) = 2e-09 Identities = 20/46 (43%), Positives = 24/46 (52%) Frame = -3 / -3 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K G SP +T HSNNP + AVF S I Sbjct: 3627 RNSINTLFIKFMKKAGVLVSPKDITVHSNNPYRVMNAVFGISSSRI 3490 Score = 29.9 bits (59), Expect(3) = 2e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -3 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3309 GAPQGDVLGRMYPFCNCSST 3250 Score = 29.5 bits (58), Expect(3) = 2e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -3 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3465 RSILENTVAPFN*SNRSSILGKGYLFLMVTLLSAR*STHILLVLSFF 3325 Score = 35.9 bits (72), Expect = 1.3 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -2 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 3634 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 3536
>LOC_Os12g19750:12012.t01818:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5864 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3816 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 3995 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3675 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3824 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +3 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3492 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 3671 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3988 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3851 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3670 GAPQGDVLGRMYPFCNCSST 3611 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3826 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 3686 Score = 36.3 bits (73), Expect(2) = 0.93 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K LIHQ+H+ CI ES+ H+ F+QP Sbjct: 3995 LV*KFHKHLIHQIHEEGRCISESERHNCAFEQP 3897 Score = 24.4 bits (47), Expect(2) = 0.93 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F+ LL + L +HS + SR QVN L+ Sbjct: 3644 TDVSLL*LFIDLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 3516
>LOC_Os06g32010:12006.t02899:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5798 Score = 68.9 bits (144), Expect(3) = 2e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4245 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4424 Score = 54.2 bits (112), Expect(3) = 2e-31 Identities = 24/58 (41%), Positives = 38/58 (65%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG +L + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3927 MPPKRDIEFRIDLVPGTTLIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 4100 Score = 52.8 bits (109), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 4104 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 4253 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 4402 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 4280 Score = 26.7 bits (52), Expect(3) = 2e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 4099 GAPHGDELGLMYPFCSKSST 4040 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 4255 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 4115 Score = 35.9 bits (72), Expect(2) = 0.38 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +3 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 3237 APRPVAAPPQQQPAKREQGNKPVVCFNCGDPGHYADKCP 3353 Score = 26.3 bits (51), Expect(2) = 0.38 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 / +2 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 VV M + WT +C +L+ LDE Sbjct: 4328 VVRMYCYVFWTYQCPCFLHELDE 4396 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 4406 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 4269
>LOC_Os09g04740:12009.t00370:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4590 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1878 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDVLGRMYPFCNCSST 1818 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFN*SNRSSILGNGYLFLIVTSLSAR*STHILLVLSFF 1893 Score = 39.1 bits (79), Expect(2) = 0.016 Identities = 16/33 (48%), Positives = 23/33 (69%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ + CI ESK H+ F+QP Sbjct: 2202 LV*KFHKHLVHQIHEESRCISESKRHNCAFEQP 2104 Score = 27.6 bits (54), Expect(2) = 0.016 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 +NV LL F++ LL + L +HS + SR QVN L+ Sbjct: 1851 ANVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1723
>LOC_Os11g06268:12011.t00519:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4578 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2026 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2205 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1885 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2034 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1702 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGASELAEVKKQVDEQLQKGYIRPSTSPWGAP 1881 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2198 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2061 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1880 GAPQGDVLGRMYPFCNCSST 1821 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2036 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1896 Score = 35.9 bits (72), Expect(3) = 3e-04 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 2205 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 2107 Score = 24.0 bits (46), Expect(3) = 3e-04 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F+ LL + L +HS + SR QVN L+ Sbjct: 1854 ADVSLL*LFIDLLLDFRQLAGSHSVRPLVDRCSSRYQVNPELD 1726 Score = 22.1 bits (42), Expect(3) = 3e-04 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ L E S +LI+ I R + GDL+ V H +FL Sbjct: 2037 QVYLREHSSSFQLIKQVINPWQRILVLDGDLIECAVVNAHPLGFVFL 1897
>LOC_Os11g06259:12011.t00518:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4578 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2026 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2205 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1885 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2034 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1702 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGASELAEVKKQVDEQLQKGYIRPSTSPWGAP 1881 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2198 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2061 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1880 GAPQGDVLGRMYPFCNCSST 1821 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2036 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1896 Score = 35.9 bits (72), Expect(3) = 3e-04 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 2205 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 2107 Score = 24.0 bits (46), Expect(3) = 3e-04 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F+ LL + L +HS + SR QVN L+ Sbjct: 1854 ADVSLL*LFIDLLLDFRQLAGSHSVRPLVDRCSSRYQVNPELD 1726 Score = 22.1 bits (42), Expect(3) = 3e-04 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ L E S +LI+ I R + GDL+ V H +FL Sbjct: 2037 QVYLREHSSSFQLIKQVINPWQRILVLDGDLIECAVVNAHPLGFVFL 1897
>LOC_Os09g10920:12009.t00882:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4578 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2026 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2205 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1885 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2034 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1702 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1881 Score = 42.8 bits (87), Expect(3) = 4e-10 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2198 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2061 Score = 29.9 bits (59), Expect(3) = 4e-10 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A S*SN S G G L+L V L+ S H+ SFF Sbjct: 2036 RSILENTVAPFS*SNRSSILGKGYLFLIVTSLSAR*STHILLVLSFF 1896 Score = 29.9 bits (59), Expect(3) = 4e-10 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1880 GAPQGDVLGRMYPFCNCSST 1821 Score = 35.4 bits (71), Expect(2) = 0.75 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ C+ ES+ H+ F+QP Sbjct: 2205 LV*KFHKHLVHQIHEEGRCVSESERHNCAFEQP 2107 Score = 25.4 bits (49), Expect(2) = 0.75 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 1854 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1726
>LOC_Os04g21560:12004.t01888:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4578 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2026 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2205 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1885 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2034 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1702 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1881 Score = 42.8 bits (87), Expect(3) = 4e-10 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2198 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2061 Score = 29.9 bits (59), Expect(3) = 4e-10 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A S*SN S G G L+L V L+ S H+ SFF Sbjct: 2036 RSILENTVAPFS*SNRSSILGKGYLFLIVTSLSAR*STHILLVLSFF 1896 Score = 29.9 bits (59), Expect(3) = 4e-10 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1880 GAPQGDVLGRMYPFCNCSST 1821 Score = 35.4 bits (71), Expect(2) = 0.75 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ C+ ES+ H+ F+QP Sbjct: 2205 LV*KFHKHLVHQIHEEGRCVSESERHNCAFEQP 2107 Score = 25.4 bits (49), Expect(2) = 0.75 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 1854 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1726
>LOC_Os07g38320:12007.t03498:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4575 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1878 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDVLGRMYPFCNCSST 1818 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1893 Score = 35.9 bits (72), Expect(2) = 0.56 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 2202 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 2104 Score = 25.4 bits (49), Expect(2) = 0.56 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 1851 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1723
>LOC_Os06g19240:12006.t01747:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4575 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1878 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDVLGRMYPFCNCSST 1818 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFN*SNRSSILGKGYLFLIVTSLSAR*STHILLVLSFF 1893 Score = 35.9 bits (72), Expect(2) = 0.56 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 2202 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 2104 Score = 25.4 bits (49), Expect(2) = 0.56 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 1851 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1723
>LOC_Os06g07520:12006.t00635:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4575 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1878 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDVLGRMYPFCNCSST 1818 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFN*SNRSSILGKGYLFLIVTSLSAR*STHILLVLSFF 1893 Score = 35.4 bits (71), Expect(2) = 0.75 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ C+ ES+ H+ F+QP Sbjct: 2202 LV*KFHKHLVHQIHEEGRCVSESERHNCAFEQP 2104 Score = 25.4 bits (49), Expect(2) = 0.75 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 1851 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1723
>LOC_Os05g45630:12005.t04051:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4575 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1878 Score = 42.8 bits (87), Expect(3) = 4e-10 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.9 bits (59), Expect(3) = 4e-10 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A S*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFS*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1893 Score = 29.9 bits (59), Expect(3) = 4e-10 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDVLGRMYPFCNCSST 1818 Score = 35.9 bits (72), Expect(3) = 4e-05 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 2202 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 2104 Score = 25.4 bits (49), Expect(3) = 4e-05 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 1851 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1723 Score = 24.0 bits (46), Expect(3) = 4e-05 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = -1 / -1 Query: 2370 LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 L E S +LI+ I R + GDL+ V TH +FL Sbjct: 2025 LREHSSSFQLIEQIINPWQRILVLDGDLIECAVVNTHPLGFVFL 1894
>LOC_Os05g44490:12005.t03938:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4575 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1878 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDVLGRMYPFCNCSST 1818 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1893 Score = 35.4 bits (71), Expect(3) = 2e-04 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ C+ ES+ H+ F+QP Sbjct: 2202 LV*KFHKHLVHQIHEEGRCVSESERHNCAFEQP 2104 Score = 25.4 bits (49), Expect(3) = 2e-04 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 1851 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1723 Score = 22.1 bits (42), Expect(3) = 2e-04 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ L E S +LI+ I R + GDL+ V H +FL Sbjct: 2034 QVYLREHSSSFQLIKQVINPWQRILVLDGDLIECAVVNAHPLGFVFL 1894
>LOC_Os04g55890:12004.t05061:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4575 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1878 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDVLGRMYPFCNCSST 1818 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1893 Score = 35.9 bits (72), Expect(2) = 0.56 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 2202 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 2104 Score = 25.4 bits (49), Expect(2) = 0.56 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 1851 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1723
>LOC_Os04g10620:12004.t00893:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4575 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1878 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDVLGRMYPFCNCSST 1818 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1893 Score = 34.1 bits (68), Expect(3) = 4e-04 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI +S+ H+ F+QP Sbjct: 2202 LV*KFHKHLVHQIHEEGRCISKSERHNCAFEQP 2104 Score = 25.4 bits (49), Expect(3) = 4e-04 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 1851 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1723 Score = 22.1 bits (42), Expect(3) = 4e-04 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 ++ L E S +LI+ I R + GDL+ V H +FL Sbjct: 2034 QVYLREHSSSFQLIKQVINPWQRILVLDGDLIECAVVNAHPLGFVFL 1894
>LOC_Os01g33250:12001.t02896:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4575 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1878 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDVLGRMYPFCNCSST 1818 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1893 Score = 35.9 bits (72), Expect(2) = 0.038 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 2202 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 2104 Score = 29.5 bits (58), Expect(2) = 0.038 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LLQ F++ LL + L +HS + SR QVN L+ Sbjct: 1851 ADVSLLQLFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1723
>LOC_Os11g25590:12011.t02175:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4563 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2011 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2190 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1870 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2019 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1687 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1866 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2183 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2046 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1865 GAPQGDVLGRMYPFCNCSST 1806 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2021 RSILENTVAPFN*SNRSSILGNGYLFLIVTSLSAR*STHILLVLSFF 1881 Score = 35.0 bits (70), Expect(2) = 1.0 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 2172 KHLVHQIHEEGRCISESERHNCAFEQP 2092 Score = 25.4 bits (49), Expect(2) = 1.0 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 1839 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1711
>LOC_Os12g26780:12012.t02391:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3711 Score = 70.3 bits (147), Expect(3) = 2e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1888 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2067 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1747 IFVEKKDHTPRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 1896 Score = 51.9 bits (107), Expect(3) = 2e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1570 MPPKRDIEFQIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 1743 Score = 45.5 bits (93), Expect(3) = 1e-09 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 2049 KHLVHQIHEKGWGISESK*HNGTFEQTIPSCEGGLWYILLTDSKLMIS 1906 Score = 31.8 bits (63), Expect(3) = 1e-09 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 1742 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGLVPGTKSI 1599 Score = 23.5 bits (45), Expect(3) = 1e-09 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 1898 RSILEKTVAPSS*SNRSSILGRGYLFLIVTSFNAR*STHILGV*SFF 1758 Score = 43.7 bits (89), Expect = 0.006 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 2045 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 1920
>LOC_Os03g49330:12003.t04283:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3690 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 1138 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 1317 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 997 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 1146 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 814 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 993 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 1310 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 1173 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 992 GAPQGDVLGRMYPFCNCSST 933 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 1148 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1008 Score = 35.9 bits (72), Expect(2) = 0.46 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 1317 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 1219 Score = 25.4 bits (49), Expect(2) = 0.46 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 966 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 838
>LOC_Os12g15100:12012.t01367:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3586 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 1634 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 1813 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1493 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 1642 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +2 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1310 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGASELAEVKKQVDEQLQKGYIRPSTSPWGAP 1489 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 1806 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 1669 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1488 GAPQGDVLGRMYPFCNCSST 1429 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 1644 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1504 Score = 35.0 bits (70), Expect(2) = 2.0 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 1795 KHLVHQIHEEGRCISESERHNCAFEQP 1715 Score = 24.0 bits (46), Expect(2) = 2.0 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F+ LL + L +HS + SR QVN L+ Sbjct: 1462 ADVSLL*LFIDLLLDFRQLAGSHSVRPLVDRCSSRYQVNPELD 1334
>LOC_Os01g29670:12001.t02652:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3240 Score = 70.7 bits (148), Expect(3) = 2e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSDYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 53.8 bits (111), Expect(3) = 2e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 51.5 bits (106), Expect(3) = 2e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1878 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDVLGRMYPFCNCSST 1818 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1893 Score = 35.9 bits (72), Expect(2) = 0.75 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 2202 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 2104 Score = 24.4 bits (47), Expect(2) = 0.75 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F+ LL + L +HS + SR QVN L+ Sbjct: 1851 ADVSLL*LFIDLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1723
>LOC_Os10g06430:12010.t00512:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5748 Score = 67.5 bits (141), Expect(5) = 2e-31 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 3223 KIDLRSGYHQLKIRTGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 3402 Score = 56.5 bits (117), Expect(5) = 2e-31 Identities = 19/50 (38%), Positives = 34/50 (68%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+P +D + D L A++F+K+D Sbjct: 3082 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPWIDDLFDQLKGAKVFSKID 3231 Score = 48.7 bits (100), Expect(5) = 2e-31 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 2905 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 3084 Query: 2232 HAKER 2246 K++ Sbjct: 3085 FVKKK 3099 Score = 33.6 bits (67), Expect(5) = 2e-31 Identities = 11/38 (28%), Positives = 18/38 (47%) Frame = +1 / +1 Query: 1198 PPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P ++ P T A + C+ CG+ GH ++ CP Sbjct: 2137 PVAIQNRTPTPTLAAPGAKKNVDCFNCGEYGHYANNCP 2250 Score = 26.7 bits (52), Expect(5) = 2e-31 Identities = 8/24 (33%), Positives = 18/24 (75%) Frame = +1 / +1 Query: 973 NEDQQVARYINGLNDAIQDRLMMQ 1044 NE++++ ++I GLND ++ ++ Q Sbjct: 1858 NEEEKIDKFIEGLNDELRGPMIGQ 1929 Score = 34.5 bits (69), Expect = 3.4 Identities = 20/47 (42%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA LS*S S G G L+L V + S H+ PSFF Sbjct: 3233 RSILENTLAPLS*SKRSSIHGSGYLFLIVTSFSER*STHILMLPSFF 3093
>LOC_Os07g16700:12007.t01530:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2457 Score = 70.3 bits (147), Expect(5) = 2e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1894 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2073 Score = 53.3 bits (110), Expect(5) = 2e-31 Identities = 18/50 (36%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD +* MC D + + ++T++ + P+PR+D + D L A +F+K+D Sbjct: 1753 IFVEKKDHT*RMCVDYRALNEVTIKNKDPLPRIDDLFDQLKGATVFSKID 1902 Score = 51.5 bits (106), Expect(5) = 2e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1576 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELADVKRQVDDLLQKGYIRPSTSPWGAP 1749 Score = 27.2 bits (53), Expect(5) = 2e-31 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +1 / +1 Query: 1267 CYKCGKEGHISSGCP 1311 C+ CG GH + CP Sbjct: 958 CFNCGDPGHYADKCP 1002 Score = 25.8 bits (50), Expect(5) = 2e-31 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = +1 / +1 Query: 781 RMLRGEPRGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 R R E T Q+ K +PA + +F+ + +RSV +Y +F RL Sbjct: 370 RQGRAEGEPITWQEFTAAFKKTHIPAGVVALKKREFRALNQRSRSVTEYLHDFNRL 537 Score = 45.1 bits (92), Expect(3) = 4e-10 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 2055 KHLVHQIHEKGWGISESK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 1912 Score = 34.1 bits (68), Expect(3) = 4e-10 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -2 / -1 Query: 2213 WANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQV 2085 W +T SNV L+Q +H L L HS + CSR QV Sbjct: 1737 WRSTGSNVSFLKQIIHLSLHVS*LISCHSVWSLMDRVCSRYQV 1609 Score = 23.5 bits (45), Expect(3) = 4e-10 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A +*SN S G G+L+L V S H+ SFF Sbjct: 1904 RSILEKTVAPFN*SNRSSILGRGSLFLIVTSFNAR*STHIL*V*SFF 1764 Score = 43.7 bits (89), Expect(2) = 3e-05 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 2051 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 1926 Score = 31.8 bits (63), Expect(2) = 3e-05 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S PG KSI Sbjct: 1748 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGFVPGTKSI 1605
>LOC_Os05g20480:12005.t01809:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 3732 Score = 68.9 bits (144), Expect(4) = 2e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1180 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 1359 Score = 52.8 bits (109), Expect(4) = 2e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1039 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1188 Score = 51.0 bits (105), Expect(4) = 2e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 862 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1035 Score = 36.8 bits (74), Expect(4) = 2e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 172 APRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 288 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 1337 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1215 Score = 26.7 bits (52), Expect(3) = 2e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 1034 GAPHGDELGLMYPFCSKSST 975 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1190 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 1050 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 1341 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 1204
>LOC_Os10g09500:12010.t00766:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 9588 Score = 70.3 bits (147), Expect(3) = 3e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4356 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4535 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 4215 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 4364 Score = 51.5 bits (106), Expect(3) = 3e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 4038 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAP 4211 Score = 45.5 bits (93), Expect(3) = 2e-09 Identities = 22/42 (52%), Positives = 25/42 (59%) Frame = -3 / -3 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN MT HSN P + KAVF S IR Sbjct: 4513 TLFIRFMKKAGALVSPNDMTVHSNKPYRVVKAVFGISSSRIR 4388 Score = 32.7 bits (65), Expect(3) = 2e-09 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = -3 / -3 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSILY*IPFIG 2057 G HG +L M PF + SST F + S L PG KSI I +G Sbjct: 4210 GAPHGEVLGLMYPF*SKSSTCFFTSANSLAAILYGLLWIGLVPGTKSIRNSISLLG 4043 Score = 22.1 bits (42), Expect(3) = 2e-09 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = -2 / -3 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A +*SN S G G L+L V S H+ SFF Sbjct: 4366 RSILEKTVAPFN*SNRSSILGRGYLFLIVTSFNAR*STHIL*V*SFF 4226 Score = 43.7 bits (89), Expect = 0.006 Identities = 21/48 (43%), Positives = 29/48 (60%) Frame = -2 / -2 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK HD KQ S +GG +I +++ LM S Sbjct: 4517 KHLVHQIHEKGWGISESK*HDGTLKQTIPSRKGGLWYILLTNSKLMIS 4374 Score = 31.3 bits (62), Expect(2) = 2.6 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = +1 / +3 Query: 1216 PIPKQTSGKGKANEGPKCYKCGKEGHISSGCPLRKFV 1326 P+ Q K + ++ C+ CG GH + CP + V Sbjct: 3369 PVQNQPVRKEQGSKPVICFNCGDPGHYADKCPKPRHV 3479 Score = 28.6 bits (56), Expect(2) = 2.6 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 / +1 Query: 2413 KPP*RERKGCLNG*SCHLDSQMHQ 2484 +PP R CL+ SCHLDS M Q Sbjct: 4414 RPPLRLGMVCLSVPSCHLDSLMPQ 4485 Score = 27.2 bits (53), Expect(2) = 5.4 Identities = 18/51 (35%), Positives = 23/51 (45%) Frame = +2 / +2 Query: 2354 QDCSQS*ISSNPYQTPG*MENRLEEKGRVV*MGSHAIWTLKCTKYLYALDE 2506 QD S ISS G ++RL + V*+ H IWT C + DE Sbjct: 4355 QDRSPFWISSTSNS*GGYTKDRLYDSVWFV*VYRHVIWTH*CPSLFHESDE 4507 Score = 23.5 bits (45), Expect(2) = 5.4 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +2 / +1 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWIS 2344 +RK+ L C ++ RS I L+P M+C I+ Sbjct: 4225 RRKIILRECAWIIER*MRSLSKISILYPELMICLIN 4332
>LOC_Os02g43450:12002.t03930:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7421 Score = 67.0 bits (140), Expect(3) = 3e-31 Identities = 27/60 (45%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM F L+NAP+ FM+LMN++ ++L Q Sbjct: 3618 KIDLRSGYHQLKIRSEDIPKTAFSTRYGLYEFTVMSFRLTNAPAFFMNLMNKIFMEYLDQ 3797 Score = 59.3 bits (123), Expect(3) = 3e-31 Identities = 21/50 (42%), Positives = 35/50 (70%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL KKDGS M D + + ++T++ ++P+PR+D + D L AR+F+K+D Sbjct: 3477 LLVKKKDGSERMVIDYRALNEVTIKNKYPLPRIDDLFDQLKGARVFSKID 3626 Score = 49.2 bits (101), Expect(3) = 3e-31 Identities = 23/67 (34%), Positives = 39/67 (58%) Frame = +3 / +3 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 TR+ P + I+++I+L PG + RM+ E +K+++EEL KG++R S SP P Sbjct: 3294 TRMPPDREIEFAIELAPGTAPIAKKPYRMAANELAEIKRQIEELESKGYVRPSSSPWGAP 3473 Query: 2226 PAHAKER 2246 K++ Sbjct: 3474 VLLVKKK 3494 Score = 41.4 bits (84), Expect(2) = 4e-06 Identities = 22/48 (45%), Positives = 27/48 (56%) Frame = -2 / -2 Query: 2381 MKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +KS F LA LS*SN S RG G L+ V L S+ + +PSFF Sbjct: 3631 LKSIFEKTLAPLS*SNKSSIRGNGYLFFIVTSFRAL*SITILSEPSFF 3488 Score = 30.9 bits (61), Expect(2) = 4e-06 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = -3 / -2 Query: 2533 WDKNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 W + + FIK +K GA S +T +S P + KAVF S LI Sbjct: 3796 WSRYSMKILFIKFMKNAGALVSLKDITVNSYRP*RVEKAVFGISSDLI 3653
>LOC_Os07g45830:12007.t04220:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7097 Score = 70.3 bits (147), Expect(3) = 3e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 5247 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 5426 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 5106 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 5255 Score = 51.5 bits (106), Expect(3) = 3e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 4929 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 5102 Score = 45.1 bits (92), Expect(3) = 3e-09 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 5408 KHLVHQIHEKGWGISESK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 5265 Score = 31.8 bits (63), Expect(3) = 3e-09 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 5101 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGLVPGTKSI 4958 Score = 22.6 bits (43), Expect(3) = 3e-09 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 5257 RSILEKTVAPSS*SNRSSILGRGYLFLIVTSFNAR*STHIL*V*SFF 5117 Score = 43.7 bits (89), Expect = 0.006 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 5404 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 5279
>LOC_Os10g09460:12010.t00762:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6929 Score = 70.3 bits (147), Expect(3) = 3e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4377 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4556 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 4236 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 4385 Score = 51.5 bits (106), Expect(3) = 3e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 4059 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAP 4232 Score = 44.1 bits (90), Expect(3) = 3e-09 Identities = 21/48 (43%), Positives = 29/48 (60%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ KQ S +GG +I +D+ LM S Sbjct: 4538 KHLVHQIHEKGWGISESK*HNGTLKQTIPSCEGGLWYIFLTDSKLMIS 4395 Score = 32.7 bits (65), Expect(3) = 3e-09 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSILY*IPFIG 2057 G HG +L M PF + SST F + S L PG KSI I +G Sbjct: 4231 GAPHGEVLGLMYPF*SKSSTCFFTSANSLAAILYGLLWIGLVPGTKSIRNSISLLG 4064 Score = 22.6 bits (43), Expect(3) = 3e-09 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 4387 RSILEKTVAPSS*SNRSSILGKGYLFLIVTSFNAR*STHIL*V*SFF 4247 Score = 43.7 bits (89), Expect = 0.006 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 4534 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 4409
>LOC_Os06g35710:12006.t03268:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6365 Score = 70.3 bits (147), Expect(3) = 3e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3813 KIDLQSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 3992 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3672 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3821 Score = 51.5 bits (106), Expect(3) = 3e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +3 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3489 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 3668 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3985 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3848 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3667 GAPQGDVLGRMYPFCNCSST 3608 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3823 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 3683 Score = 35.9 bits (72), Expect(2) = 0.75 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 3992 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 3894 Score = 25.4 bits (49), Expect(2) = 0.75 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 3641 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 3513
>LOC_Os02g28010:12002.t02495:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6183 Score = 70.7 bits (148), Expect(3) = 3e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3838 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 4017 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3697 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3846 Score = 51.0 bits (105), Expect(3) = 3e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3514 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELVEVKKQVDEQLQKGYIRPSTSPWGAP 3693 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 4010 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3873 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3692 GAPQGDVLGRMYPFCNCSST 3633 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 3848 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 3708 Score = 35.9 bits (72), Expect = 1.3 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 4017 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 3919
>LOC_Os03g23110:12003.t02058:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6010 Score = 70.3 bits (147), Expect(3) = 3e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 3449 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 3628 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3308 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3457 Score = 51.5 bits (106), Expect(3) = 3e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3131 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAP 3304 Score = 43.7 bits (89), Expect(3) = 3e-09 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 3606 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 3481 Score = 32.7 bits (65), Expect(3) = 3e-09 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSILY*IPFIG 2057 G HG +L M PF + SST F + S L PG KSI I +G Sbjct: 3303 GAPHGEVLGLMYPF*SKSSTCFFTSANSLAAILYGLLWIGLVPGTKSIRNSISLLG 3136 Score = 23.1 bits (44), Expect(3) = 3e-09 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A +*SN S G G L+L V + S H+ SFF Sbjct: 3459 RSILEKTVAPFN*SNRSSILGSGYLFLIVTSFSAR*STHIL*V*SFF 3319 Score = 36.3 bits (73), Expect = 0.96 Identities = 19/48 (39%), Positives = 27/48 (56%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K LIH +H+ W I ESK H+ +Q S +G +I +D+ LM S Sbjct: 3610 KHLIH*IHEKGWGISESK*HNSTLEQTIPSCEGSLWYIFLTDSKLMIS 3467
>LOC_Os05g29120:12005.t02561:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5739 Score = 67.5 bits (141), Expect(3) = 3e-31 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 3217 KIDLRSGYHQLKIRTGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 3396 Score = 60.2 bits (125), Expect(3) = 3e-31 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 3076 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 3225 Score = 47.8 bits (98), Expect(3) = 3e-31 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 2899 MPPDRDIKFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPRGAPVL 3078 Query: 2232 HAKER 2246 K++ Sbjct: 3079 FVKKK 3093 Score = 36.8 bits (74), Expect = 0.70 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA LS*S S RG G L+L V + S H+ PSFF Sbjct: 3227 RSILENTLAPLS*SKRSSIRGSGYLFLIVTSFSER*STHILMLPSFF 3087
>LOC_Os09g12890:12009.t01079:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5619 Score = 70.3 bits (147), Expect(3) = 3e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 2865 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 3044 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 2724 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 2873 Score = 51.5 bits (106), Expect(3) = 3e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 2547 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 2720 Score = 45.1 bits (92), Expect(3) = 3e-09 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -2 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 3026 KHLVHQIHEKGWGISESK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 2883 Score = 31.8 bits (63), Expect(3) = 3e-09 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -3 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 2719 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGLVPGTKSI 2576 Score = 22.6 bits (43), Expect(3) = 3e-09 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -3 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 2875 RSILEKTVAPSS*SNRSSILGRGYLFLIVTSFNAR*STHIL*V*SFF 2735 Score = 43.7 bits (89), Expect = 0.006 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -3 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 3022 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 2897
>LOC_Os10g10920:12010.t00896:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4573 Score = 70.7 bits (148), Expect(3) = 3e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2021 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2200 Score = 53.3 bits (110), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1880 IFVEKKDKTKRMCIDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2029 Score = 51.5 bits (106), Expect(3) = 3e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +2 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1697 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1876 Score = 42.8 bits (87), Expect(3) = 8e-10 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2193 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2056 Score = 29.9 bits (59), Expect(3) = 8e-10 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1875 GAPQGDVLGRMYPFCNCSST 1816 Score = 29.0 bits (57), Expect(3) = 8e-10 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S+H+ SFF Sbjct: 2031 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*SMHILLVLSFF 1891 Score = 35.9 bits (72), Expect(2) = 1.0 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F+QP Sbjct: 2200 LV*KFHKHLVHQIHEEGRCISESERHNCAFEQP 2102 Score = 24.4 bits (47), Expect(2) = 1.0 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F+ LL + L +HS + SR QVN L+ Sbjct: 1849 ADVSLL*LFIDLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1721
>LOC_Os04g11310:12004.t00959:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 69.3 bits (145), Expect(3) = 3e-31 Identities = 28/60 (46%), Positives = 43/60 (71%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1888 KIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMEYLDK 2067 Score = 60.6 bits (126), Expect(3) = 3e-31 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDNLFDQLKGAKVFSKID 1896 Score = 45.5 bits (93), Expect(3) = 3e-31 Identities = 21/54 (38%), Positives = 33/54 (61%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISP 2213 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP Sbjct: 1570 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSP 1731 Score = 28.6 bits (56), Expect(3) = 8.6 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = +1 / +1 Query: 1267 CYKCGKEGHISSGCP 1311 C+ CG+ GH ++ CP Sbjct: 871 CFNCGEYGHFANKCP 915 Score = 24.9 bits (48), Expect(3) = 8.6 Identities = 10/44 (22%), Positives = 22/44 (50%) Frame = +1 / +1 Query: 817 QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 ++ + F+PA ++ +F+ +GN +V +Y F +L Sbjct: 364 EEFTTAFRDNFVPAAVMRMKKNEFRKLRQGNTTVQEYLNRFTQL 495 Score = 24.4 bits (47), Expect(3) = 8.6 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +2 / +3 Query: 2411 ENRLEEKGRVV*MGSHAIWTLKCTKYLYALDESSPSTIL 2527 +NR+ VV*+ S+ +W+ +C L+ E S IL Sbjct: 1944 QNRVFNTLWVV*IHSNVVWSNQCPSILHESYEQSIHGIL 2060
>LOC_Os04g05290:12004.t00411:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3968 Score = 70.3 bits (147), Expect(3) = 3e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 3462 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 3641 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3321 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 3470 Score = 51.5 bits (106), Expect(3) = 3e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3144 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAP 3317 Score = 45.5 bits (93), Expect(2) = 2e-05 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 3623 KHLVHQIHEKGWGISESKRHNGTFEQTIPSCEGGLWYIFLTDSKLMIS 3480 Score = 31.3 bits (62), Expect(2) = 2e-05 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 3316 GAPHGEVLGLMYPF*SKSSTCFFTSANSLAAILYGLLWIGLVPGTKSI 3173 Score = 43.7 bits (89), Expect = 0.006 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 3619 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 3494
>LOC_Os12g27880:12012.t02499:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3846 Score = 70.3 bits (147), Expect(3) = 3e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1894 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2073 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1753 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 1902 Score = 51.5 bits (106), Expect(3) = 3e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1576 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 1749 Score = 46.4 bits (95), Expect(3) = 1e-09 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 2055 KHLVHQIHEKGWSISESK*HNSTFEQTIPSCEGGLWYIFLTDSKLMIS 1912 Score = 31.8 bits (63), Expect(3) = 1e-09 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 1748 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGLVPGTKSI 1605 Score = 22.6 bits (43), Expect(3) = 1e-09 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 1904 RSILEKTVAPSS*SNRSSILGRGYLFLIVTSFNAR*STHIL*V*SFF 1764 Score = 43.7 bits (89), Expect = 0.006 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 2051 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 1926
>LOC_Os08g21280:12008.t01925:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3792 Score = 71.6 bits (150), Expect(3) = 3e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 1447 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 1626 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1306 IFVEKKDKTKRMCVDYHALNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1455 Score = 50.1 bits (103), Expect(3) = 3e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL PG + RM+ E +K++V+E LQKG+I+ SISP P Sbjct: 1123 TTMPPKREIEFRIDLAPGTAAIYKRSYRMAANELAEVKKQVDEQLQKGYIQPSISPWGAP 1302 Score = 44.6 bits (91), Expect(3) = 1e-08 Identities = 22/46 (47%), Positives = 26/46 (56%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SPN +T HSNNP + KAV S I Sbjct: 1619 RNSINTLFIKFMKKAGALVSPNDITVHSNNPYRVVKAVLGISSSRI 1482 Score = 28.1 bits (55), Expect(3) = 1e-08 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA +*SN S G G L+L V L S H+ SFF Sbjct: 1457 RSILENTLAPFN*SNRSSILGKGYLFLIVTSLRA**STHILLVLSFF 1317 Score = 24.9 bits (48), Expect(3) = 1e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G IL M PFC+ SST Sbjct: 1301 GAPQGEILGWMYPFCSCSST 1242 Score = 40.5 bits (82), Expect = 0.055 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = -2 / -1 Query: 2525 ELSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQG 2418 +L K +HQVH+ + CI ESK H+ KQP S +G Sbjct: 1617 KLHKHFVHQVHEESRCIGESK*HNRALKQPIPSSEG 1510 Score = 33.6 bits (67), Expect(2) = 0.47 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +2 / +3 Query: 2438 VV*MGSHAIWTLKCTKYLYALDESS 2512 VV*+ + IWT +CT +L+ LDE S Sbjct: 1530 VV*VHGYVIWTHQCTGFLHELDEQS 1604 Score = 27.6 bits (54), Expect(2) = 0.47 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = +1 / +1 Query: 1240 KGKANEGPKCYKCGKEGHISSGCPLRK 1320 K A + C+ CGK GH + P K Sbjct: 469 KESAGKPRPCFNCGKHGHFAGKYPKPK 549
>LOC_Os11g12130:12011.t01100:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3960 Score = 70.3 bits (147), Expect(3) = 3e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1894 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2073 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1753 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 1902 Score = 51.5 bits (106), Expect(3) = 3e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1576 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 1749 Score = 45.1 bits (92), Expect(3) = 3e-09 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 2055 KHLVHQIHEKGWGISESK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 1912 Score = 31.8 bits (63), Expect(3) = 3e-09 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 1748 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGLVPGTKSI 1605 Score = 22.6 bits (43), Expect(3) = 3e-09 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 1904 RSILEKTVAPSS*SNRSSILGRGYLFLIVTSFNAR*STHIL*V*SFF 1764 Score = 43.7 bits (89), Expect = 0.006 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 2051 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 1926 Score = 31.3 bits (62), Expect(2) = 9.4 Identities = 10/32 (31%), Positives = 16/32 (50%) Frame = +1 / +1 Query: 1216 PIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P+ Q K + ++ C+ CG GH + CP Sbjct: 907 PVQNQPVRKEQGSKPGVCFNCGDPGHYADKCP 1002 Score = 25.4 bits (49), Expect(2) = 9.4 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +1 / +2 Query: 2371 LDFIKSVSDPGMNGKPP*RERKGCLNG*SCHLDSQMHQ 2484 LD I S + +PP + C N CHLDS M Q Sbjct: 1910 LDIINFESVRKIYQRPPSQLGMVCSNVPLCHLDSLMPQ 2023
>LOC_Os10g09060:12010.t00724:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3510 Score = 70.3 bits (147), Expect(3) = 3e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1480 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 1659 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1339 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 1488 Score = 51.5 bits (106), Expect(3) = 3e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1162 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 1335 Score = 43.7 bits (89), Expect(3) = 9e-09 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 1637 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 1512 Score = 31.8 bits (63), Expect(3) = 9e-09 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 1334 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGLVPGTKSI 1191 Score = 22.6 bits (43), Expect(3) = 9e-09 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 1490 RSILEKTVAPSS*SNRSSILGRGYLFLIVTSFNAR*STHIL*V*SFF 1350 Score = 43.7 bits (89), Expect = 0.006 Identities = 20/46 (43%), Positives = 29/46 (63%) Frame = -2 / -1 Query: 2510 LIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 1635 LVHQIHEKGWGISESKRHNGTFEQTIPSCEGGLWYIFLTDSKLMIS 1498
>LOC_Os09g10450:12009.t00837:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2844 Score = 66.6 bits (139), Expect(3) = 3e-31 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 319 KIDLRSGYHQLKIRIGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLGK 498 Score = 60.2 bits (125), Expect(3) = 3e-31 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 178 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 327 Score = 48.7 bits (100), Expect(3) = 3e-31 Identities = 22/61 (36%), Positives = 36/61 (59%) Frame = +3 / +1 Query: 2064 KGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPAHAKE 2243 + I+++IDLIPG + + RM E + LK+++ EL +KG +R S SP P K+ Sbjct: 13 RDIEFTIDLIPGTTPISKRPYRMPVNEFEELKKQIRELQEKGFVRPSSSPWGAPVLFVKK 192 Query: 2244 R 2246 + Sbjct: 193 K 195 Score = 36.3 bits (73), Expect = 0.96 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA LS*S S RG G L+L V + S H+ PSFF Sbjct: 329 RSILENTLAPLS*SKRSSIRGNGYLFLIVTSFSER*STHILMLPSFF 189
>LOC_Os06g21050:12006.t01922:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3901 Score = 68.9 bits (144), Expect(4) = 3e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1871 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2050 Score = 52.8 bits (109), Expect(4) = 3e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1730 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1879 Score = 51.0 bits (105), Expect(4) = 3e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1553 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1726 Score = 36.8 bits (74), Expect(4) = 3e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 862 APRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 978 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2028 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1906 Score = 26.7 bits (52), Expect(3) = 2e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 1725 GAPHGDELGLMYPFCSKSST 1666 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1881 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 1741 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 2032 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 1895
>LOC_Os01g39930:12001.t03519:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4368 Score = 68.9 bits (144), Expect(4) = 3e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1870 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2049 Score = 52.8 bits (109), Expect(4) = 3e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1729 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1878 Score = 51.5 bits (106), Expect(4) = 3e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1552 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRKVDDLLQKGYIRPSSSPWGAP 1725 Score = 36.8 bits (74), Expect(4) = 3e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 862 APRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 978 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2027 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1905 Score = 26.7 bits (52), Expect(3) = 2e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 1724 GAPHGDELGLMYPFCSKSST 1665 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1880 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 1740 Score = 34.5 bits (69), Expect(2) = 0.97 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 2031 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 1894 Score = 25.8 bits (50), Expect(2) = 0.97 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -2 / -1 Query: 2123 VWKIRETCSRNQVNTILNSFY 2061 +W I CSRN ++T L +Y Sbjct: 1086 IWSILSFCSRNMIDTGL*CWY 1024
>LOC_Os08g11570:12008.t01039:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5862 Score = 70.3 bits (147), Expect(5) = 3e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1893 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2072 Score = 53.8 bits (111), Expect(5) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1752 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 1901 Score = 49.2 bits (101), Expect(5) = 3e-31 Identities = 22/58 (37%), Positives = 36/58 (62%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR SP P Sbjct: 1575 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPCTSPWGAP 1748 Score = 29.9 bits (59), Expect(5) = 3e-31 Identities = 11/35 (31%), Positives = 15/35 (42%) Frame = +1 / +1 Query: 1207 VKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 V P+ Q K + ++ C CG GH CP Sbjct: 898 VATPVQNQPVRKEQGSKPGVCLNCGDPGHYDDKCP 1002 Score = 29.5 bits (58), Expect(5) = 3e-31 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = +1 / +1 Query: 781 RMLRGEPRGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 R R E T Q+ K +PA + +F+ +G+RSV +Y +F RL Sbjct: 370 RQGRAEGEPITWQEFTAAFKKMHIPAGVVALKKREFRALNQGSRSVTEYLHDFNRL 537 Score = 43.7 bits (89), Expect(2) = 4e-04 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -3 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 2050 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 1925 Score = 29.0 bits (57), Expect(2) = 4e-04 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = -3 / -3 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG + M PF + SST F + S L PG KSI Sbjct: 1747 GAPHGEVQGLMYPF*SKSSTCLFTSANSLAAILYGLLWIGLVPGTKSI 1604 Score = 43.2 bits (88), Expect = 0.008 Identities = 20/48 (41%), Positives = 30/48 (62%) Frame = -2 / -2 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I +SK H+ F+Q S +GG +I +D+ LM S Sbjct: 2054 KHLVHQIHEKGWGISKSK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 1911
>LOC_Os08g06990:12008.t00588:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7745 Score = 68.9 bits (144), Expect(3) = 3e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 6588 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 6767 Score = 53.3 bits (110), Expect(3) = 3e-31 Identities = 24/58 (41%), Positives = 38/58 (65%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++SIDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 6270 MPPKRDIEFSIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 6443 Score = 52.8 bits (109), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 6447 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 6596 Score = 44.1 bits (90), Expect(3) = 9e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 6745 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 6623 Score = 27.2 bits (53), Expect(3) = 9e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 6598 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWV*SFF 6458 Score = 23.1 bits (44), Expect(3) = 9e-08 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G L M PFC+ SST Sbjct: 6442 GAPQGDELGLMYPFCSKSST 6383 Score = 36.3 bits (73), Expect(2) = 0.36 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +1 / +3 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P+ +Q + + + ++ C+ CG GH + CP Sbjct: 5580 APRPVAAPVQQQPAKREQGSKPVVCFNCGDPGHYADKCP 5696 Score = 26.3 bits (51), Expect(2) = 0.36 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 / +2 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 VV M + WT +C +L+ LDE Sbjct: 6671 VVRMYCYVFWTYQCPCFLHELDE 6739
>LOC_Os09g08750:12009.t00669:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4899 Score = 66.1 bits (138), Expect(3) = 3e-31 Identities = 27/60 (45%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LM++V +L + Sbjct: 1888 KIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMSKVFMDYLDK 2067 Score = 60.2 bits (125), Expect(3) = 3e-31 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1896 Score = 48.7 bits (100), Expect(3) = 3e-31 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 1570 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764
>LOC_Os01g50500:12001.t04484:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4575 Score = 70.7 bits (148), Expect(3) = 3e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 53.8 bits (111), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 50.6 bits (104), Expect(3) = 3e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRLSTSPWGAP 1878 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.5 bits (58), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDVLRRMYPFCNCSST 1818 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1893 Score = 35.9 bits (72), Expect = 1.3 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = -2 / -1 Query: 2528 *ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 *+ K LIHQ+H+ CI ES+ H+ F+QP Sbjct: 2196 *KFHKHLIHQIHEEGRCISESERHNCAFEQP 2104
>LOC_Os08g38940:12008.t03628:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4543 Score = 66.1 bits (138), Expect(3) = 3e-31 Identities = 27/60 (45%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ V+ FGL+NAP+ FM+LMN+V +L + Sbjct: 3425 KIDLRSGYHQLKIRTGDIPKTAFSTRYGLYEFTVLSFGLTNAPAYFMNLMNKVFMDYLDK 3604 Score = 60.2 bits (125), Expect(3) = 3e-31 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 3284 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 3433 Score = 48.7 bits (100), Expect(3) = 3e-31 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 3107 MPPDRDIEFLIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 3286 Query: 2232 HAKER 2246 K++ Sbjct: 3287 FVKKK 3301 Score = 36.8 bits (74), Expect = 0.70 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA LS*S S RG G L+L V + S H+ PSFF Sbjct: 3435 RSILENTLAPLS*SKRSSIRGSGYLFLIVTSFSER*STHILMLPSFF 3295
>LOC_Os08g11850:12008.t01065:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4446 Score = 70.3 bits (147), Expect(3) = 3e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1894 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2073 Score = 53.3 bits (110), Expect(3) = 3e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1753 IFVEKKDYTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 1902 Score = 51.5 bits (106), Expect(3) = 3e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1576 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAP 1749 Score = 46.4 bits (95), Expect(3) = 2e-10 Identities = 22/42 (52%), Positives = 26/42 (61%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GAF SPN +T HSN P + KAVF S IR Sbjct: 2051 TLFIRFMKKAGAFVSPNDITVHSNKPYRVVKAVFGISSSRIR 1926 Score = 31.3 bits (62), Expect(3) = 2e-10 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 1748 GAPHGEVLGLMYPF*SKSSTCFFTSANSLAAILYGLLWMGLVPGTKSI 1605 Score = 25.8 bits (50), Expect(3) = 2e-10 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 EI L E +LI+ I +G R I G+L+ + TH IFL Sbjct: 1905 EIYLGENCSTFQLIKQVINSG*RIFILDGNLIQRSIIHTHSLSIIFL 1765 Score = 45.1 bits (92), Expect(2) = 1e-04 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 2055 KHLVHQIHEKGWGICESK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 1912 Score = 22.1 bits (42), Expect(2) = 1e-04 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A +*SN S G G L+L V S H+ SFF Sbjct: 1904 RSILEKTVAPFN*SNRSSILGRGYLFLMVTSFNAR*STHIL*V*SFF 1764 Score = 26.7 bits (52), Expect(2) = 1.3 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +1 / +2 Query: 2413 KPP*RERKGCLNG*SCHLDSQMHQ 2484 +PP + C N CHLDSQM Q Sbjct: 1952 RPPSQLGMVCSNVPLCHLDSQMPQ 2023 Score = 26.3 bits (51), Expect(2) = 1.3 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 / +2 Query: 2237 QRKMDLDTCVRTLKSLRRSP*GIDSLFPAWMVCWIS 2344 +RK+ L CV ++ R P I+ L+P M C I+ Sbjct: 1763 RRKIILRECVWIIER*MRLPSRINILYPELMTCLIN 1870
>LOC_Os04g05730:12004.t00454:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4084 Score = 67.5 bits (141), Expect(3) = 3e-31 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1853 KIDLRSGYHQLKIRTGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2032 Score = 60.2 bits (125), Expect(3) = 3e-31 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1712 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1861 Score = 47.3 bits (97), Expect(3) = 3e-31 Identities = 23/66 (34%), Positives = 37/66 (56%) Frame = +3 / +2 Query: 2049 RLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPP 2228 R+ P + I++ IDLIPG + + RM E + LK+++ EL +KG + S SP P Sbjct: 1532 RMPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVCPSSSPWGAPV 1711 Query: 2229 AHAKER 2246 K++ Sbjct: 1712 LFVKKK 1729 Score = 36.8 bits (74), Expect = 0.70 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA LS*S S RG G L+L V + S H+ PSFF Sbjct: 1863 RSILENTLAPLS*SKRSSIRGSGYLFLIVTSFSER*STHILMLPSFF 1723
>LOC_Os04g14620:12004.t01281:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4391 Score = 64.8 bits (135), Expect(5) = 4e-31 Identities = 28/60 (46%), Positives = 40/60 (66%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI D KTA + LFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1900 KIDLRSGYHQLRIHEEDIPKTAFTTRYDLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2079 Score = 53.8 bits (111), Expect(5) = 4e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1759 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 1908 Score = 51.5 bits (106), Expect(5) = 4e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1582 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAP 1755 Score = 31.3 bits (62), Expect(5) = 4e-31 Identities = 10/32 (31%), Positives = 16/32 (50%) Frame = +1 / +1 Query: 1216 PIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 P+ Q K + ++ C+ CG GH + CP Sbjct: 913 PVQNQPVRKEQGSKPGVCFNCGDPGHYADKCP 1008 Score = 29.5 bits (58), Expect(5) = 4e-31 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = +1 / +1 Query: 781 RMLRGEPRGRT*QQMKCLLKGRFLPADCDQILFIQFQNCARGNRSVLDYTEEFLRL 948 R R E T Q+ K +PA + +F+ +G+RSV +Y +F RL Sbjct: 376 RQGRAEGEPITWQEFTAAFKKTHIPAGVVALKKREFRALNQGSRSVTEYLHDFNRL 543 Score = 40.0 bits (81), Expect(3) = 5e-09 Identities = 20/42 (47%), Positives = 24/42 (57%) Frame = -3 / -1 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN + KAVF S IR Sbjct: 2057 TLFIRFMKKAGALVSPNDITVHSNKSYRVVKAVFGISSSWIR 1932 Score = 32.7 bits (65), Expect(3) = 5e-09 Identities = 18/48 (37%), Positives = 22/48 (45%) Frame = -3 / -1 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L + PF + SST F + SF L PG KSI Sbjct: 1754 GAPHGEVLGLIYPF*SKSSTCLFTSANSFAAILYGLLWIGLVPGTKSI 1611 Score = 26.3 bits (51), Expect(3) = 5e-09 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -1 / -3 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 EI L E +LI+ I +G R I G+L+ + TH IFL Sbjct: 1911 EIYLGENCSTFQLIKQVINSG*RILILDGNLIQRSIIHTHSLSMIFL 1771 Score = 39.1 bits (79), Expect(2) = 0.005 Identities = 20/48 (41%), Positives = 28/48 (58%) Frame = -2 / -3 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+ S +GG +I D+ LM S Sbjct: 2061 KHLVHQIHEKGWGISESK*HNGTFE*IIPSCEGGLWYIFLMDSKLMIS 1918 Score = 22.6 bits (43), Expect(2) = 0.005 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 1910 RSILEKTVAPSS*SNRSSILGRGYLFLMVTSFNAR*STHIL*V*SFF 1770
>LOC_Os12g30400:12012.t02747:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 68.9 bits (144), Expect(4) = 4e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1870 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2049 Score = 52.8 bits (109), Expect(4) = 4e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1729 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1878 Score = 51.0 bits (105), Expect(4) = 4e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1552 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1725 Score = 36.8 bits (74), Expect(4) = 4e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 862 APRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 978 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2027 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1905 Score = 26.7 bits (52), Expect(3) = 2e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 1724 GAPHGDELGLMYPFCSKSST 1665 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1880 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 1740 Score = 33.6 bits (67), Expect = 6.4 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQ+H+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 2031 KHLIHQIHEESRGIGKSKRHNGTFEQPIPSGKSCLRYIFLFDSQLM 1894
>LOC_Os09g01230:12009.t00025:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4423 Score = 68.9 bits (144), Expect(4) = 4e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1870 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2049 Score = 52.8 bits (109), Expect(4) = 4e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1729 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1878 Score = 51.0 bits (105), Expect(4) = 4e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1552 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1725 Score = 36.8 bits (74), Expect(4) = 4e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 862 APRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 978 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -3 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2027 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1905 Score = 26.7 bits (52), Expect(3) = 2e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -3 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 1724 GAPHGDELGLMYPFCSKSST 1665 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -3 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1880 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 1740 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -2 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 2031 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 1894
>LOC_Os04g07710:12004.t00645:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 68.9 bits (144), Expect(4) = 4e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1870 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2049 Score = 52.8 bits (109), Expect(4) = 4e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1729 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1878 Score = 51.0 bits (105), Expect(4) = 4e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1552 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1725 Score = 36.8 bits (74), Expect(4) = 4e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 862 APRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 978 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2027 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1905 Score = 29.9 bits (59), Expect(3) = 2e-08 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1880 RSILENTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWVWSFF 1740 Score = 23.1 bits (44), Expect(3) = 2e-08 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G L M PFC+ SST Sbjct: 1724 GAPQGDELGLMYPFCSKSST 1665
>LOC_Os01g45490:12001.t04004:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4428 Score = 68.9 bits (144), Expect(4) = 4e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1876 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2055 Score = 52.8 bits (109), Expect(4) = 4e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1735 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1884 Score = 51.0 bits (105), Expect(4) = 4e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1558 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1731 Score = 36.8 bits (74), Expect(4) = 4e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 868 APRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 984 Score = 44.1 bits (90), Expect(2) = 8e-06 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2033 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1911 Score = 27.2 bits (53), Expect(2) = 8e-06 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1886 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWV*SFF 1746 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 2037 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 1900
>LOC_Os08g27110:12008.t02475:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4436 Score = 68.9 bits (144), Expect(4) = 4e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1876 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2055 Score = 52.8 bits (109), Expect(4) = 4e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1735 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1884 Score = 51.0 bits (105), Expect(4) = 4e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1558 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1731 Score = 36.8 bits (74), Expect(4) = 4e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 868 APRPVAAPTQQQPAKREQGNKPVVCFNCGDPGHYADKCP 984 Score = 44.1 bits (90), Expect(2) = 1e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -1 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2033 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1911 Score = 26.3 bits (51), Expect(2) = 1e-05 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V S H+ SFF Sbjct: 1886 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFRAR*STHILWVWSFF 1746
>LOC_Os04g03190:12004.t00209:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5495 Score = 66.1 bits (138), Expect(4) = 4e-31 Identities = 27/60 (45%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KT+ + GLFE V+ FGL+NAP+ FM+LMN+V ++L + Sbjct: 2943 KIDLRSGYHQLRIKEEDIPKTSFTTRYGLFECTVLSFGLTNAPAFFMNLMNKVFMEYLDK 3122 Score = 54.7 bits (113), Expect(4) = 4e-31 Identities = 18/46 (39%), Positives = 32/46 (69%) Frame = +1 / +3 Query: 2239 KKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 KKD +* MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 2814 KKDHT*RMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 2951 Score = 51.0 bits (105), Expect(4) = 4e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 2625 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 2798 Score = 38.6 bits (78), Expect(4) = 4e-31 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P+ Q + + N+ C+ CG+ GH S CP Sbjct: 1933 APHPVTTPVQHQPIKREQGNKPGVCFNCGEPGHYSDKCP 2049 Score = 38.2 bits (77), Expect(3) = 2e-07 Identities = 19/41 (46%), Positives = 21/41 (51%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP T HSNNP + V S LI Sbjct: 3100 TLFIKFMKKAGALVSPKDKTVHSNNPYLVVNDVLGISSSLI 2978 Score = 27.6 bits (54), Expect(3) = 2e-07 Identities = 18/56 (32%), Positives = 22/56 (39%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSILY*IPFIG 2057 G HG L M PF + SST + S + PG +SIL I G Sbjct: 2797 GAPHGDELGLMYPF*SKSSTCLLTSANSLAAILYGLLWIGVVPGTRSILNSISLFG 2630 Score = 27.2 bits (53), Expect(3) = 2e-07 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFGV 2232 +S +A LS*SN S G G L+L V + S H+ SFF + Sbjct: 2953 RSILEKTVAPLS*SNKSSILGRGYLFLMVTSFSAR*STHIL*V*SFFSI 2807 Score = 28.6 bits (56), Expect(2) = 4.2 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -2 / -1 Query: 2522 LSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLS 2427 L K LIHQVH+ + I +S+ + F+QP S Sbjct: 3110 LHKYLIHQVHEESGSIGKSERQNSTFEQPIPS 3015 Score = 22.6 bits (43), Expect(2) = 4.2 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLWRE 2230 +I L E KLI+ I + R I G ++ + TH IFL+ + Sbjct: 2954 KIDLGENGGTLKLIKQIINSRQRVLILDGHIIQCTIIHTHPLGMIFLFHK 2805
>LOC_Os04g07340:12004.t00608:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2421 Score = 68.9 bits (144), Expect(4) = 4e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1861 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2040 Score = 52.8 bits (109), Expect(4) = 4e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1720 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1869 Score = 50.6 bits (104), Expect(4) = 4e-31 Identities = 23/58 (39%), Positives = 36/58 (62%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K+ V++LLQKG+IR S SP P Sbjct: 1543 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRHVDDLLQKGYIRPSSSPWGAP 1716 Score = 34.5 bits (69), Expect(4) = 4e-31 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + ++ C+ CG GH + CP Sbjct: 853 APRPVAAPTQQQPAKREQGSKPVVCFNCGDPGHYADKCP 969 Score = 44.1 bits (90), Expect(2) = 1e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2018 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1896 Score = 26.7 bits (52), Expect(2) = 1e-05 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V S H+ SFF Sbjct: 1871 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFNAR*STHILWVWSFF 1731 Score = 33.1 bits (66), Expect(2) = 1.9 Identities = 19/48 (39%), Positives = 28/48 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K LIHQVH+ + I +SK H+ F+QP S + +I D+ L+ S Sbjct: 2022 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLVIS 1879 Score = 25.4 bits (49), Expect(2) = 1.9 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -2 / -1 Query: 2123 VWKIRETCSRNQVNTILNSFYR 2058 +W I CS N ++T L +YR Sbjct: 1077 IWSILSFCSSNMIDTGL*CWYR 1012
>LOC_Os07g16770:12007.t01537:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8270 Score = 70.3 bits (147), Expect(3) = 5e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA K GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 7269 KIDLRSGYHQLRIKEEDIPKTAFTTKYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 7448 Score = 53.3 bits (110), Expect(3) = 5e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 7128 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATIFSKID 7277 Score = 51.0 bits (105), Expect(3) = 5e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 6951 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 7124 Score = 44.1 bits (90), Expect(2) = 1e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 7426 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 7304 Score = 26.3 bits (51), Expect(2) = 1e-05 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = -2 / -2 Query: 2357 LAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +A LS*SN S G G L+L V + S H+ SFF Sbjct: 7258 VAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWV*SFF 7139 Score = 35.4 bits (71), Expect = 1.8 Identities = 20/48 (41%), Positives = 28/48 (58%) Frame = -2 / -1 Query: 2522 LSKDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 L K LIHQVH+ + I +SK H+ F+Q LS + +I D+ LM Sbjct: 7436 LHKHLIHQVHEESRGIGKSKRHNSTFEQSILSGKSCLRYIFLFDSQLM 7293
>LOC_Os08g11800:12008.t01060:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6554 Score = 68.9 bits (144), Expect(3) = 5e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4083 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4262 Score = 52.8 bits (109), Expect(3) = 5e-31 Identities = 24/58 (41%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P K I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3765 MPPKKDIEFKIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 3938 Score = 52.8 bits (109), Expect(3) = 5e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 3942 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 4091 Score = 44.1 bits (90), Expect(2) = 8e-06 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 4240 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 4118 Score = 27.2 bits (53), Expect(2) = 8e-06 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 4093 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWV*SFF 3953 Score = 31.3 bits (62), Expect(2) = 0.57 Identities = 10/35 (28%), Positives = 18/35 (51%) Frame = +1 / +3 Query: 1207 VKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 V P +Q + + + ++ C+ CG GH + CP Sbjct: 3087 VAAPTQQQPAKREQGSKPVMCFNCGDPGHYADKCP 3191 Score = 30.4 bits (60), Expect(2) = 0.57 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +2 / +2 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 +V*M + WT +C ++L+ LDE Sbjct: 4166 IV*MYCYVFWTYQCPRFLHELDE 4234 Score = 33.1 bits (66), Expect = 8.8 Identities = 19/46 (41%), Positives = 26/46 (56%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ FKQ S + +I D+ LM Sbjct: 4244 KHLIHQVHEESGGIGKSKRHNSTFKQSIPSGKSCLRYIFLLDSQLM 4107
>LOC_Os01g27320:12001.t02435:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6434 Score = 70.7 bits (148), Expect(3) = 5e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L Q Sbjct: 5397 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDQ 5576 Score = 52.8 bits (109), Expect(3) = 5e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 5256 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 5405 Score = 51.0 bits (105), Expect(3) = 5e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 5079 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 5252 Score = 47.3 bits (97), Expect(2) = 2e-06 Identities = 22/48 (45%), Positives = 26/48 (54%) Frame = -3 / -2 Query: 2533 WDKNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 W + T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 5575 WSRYSINTLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 5432 Score = 25.8 bits (50), Expect(2) = 2e-06 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V S H+ SFF Sbjct: 5407 RSILEKTVAPLS*SNKSSILGRGYLFLIVTSFRAR*STHILWV*SFF 5267 Score = 35.0 bits (70), Expect = 2.5 Identities = 20/48 (41%), Positives = 28/48 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K LIHQVH+ + I ESK H+ F+QP S + +I D+ L+ S Sbjct: 5558 KHLIHQVHEESRGIGESKRHNSTFEQPIPSGKSCLRYIFLFDSQLVIS 5415
>LOC_Os10g09440:12010.t00760:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6308 Score = 70.3 bits (147), Expect(3) = 5e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4152 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4331 Score = 53.8 bits (111), Expect(3) = 5e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 4011 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 4160 Score = 50.6 bits (104), Expect(3) = 5e-31 Identities = 22/58 (37%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++L+QKG+IR S SP P Sbjct: 3834 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLIQKGYIRPSTSPWGAP 4007 Score = 44.1 bits (90), Expect(3) = 3e-09 Identities = 21/48 (43%), Positives = 29/48 (60%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ KQ S +GG +I +D+ LM S Sbjct: 4313 KHLVHQIHEKGWGISESK*HNGTLKQTIPSCEGGLWYIFLTDSKLMIS 4170 Score = 30.9 bits (61), Expect(3) = 3e-09 Identities = 20/56 (35%), Positives = 23/56 (41%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSILY*IPFIG 2057 G HG +L M PF SST F + S L PG KSI I +G Sbjct: 4006 GAPHGEVLGLMYPF*IKSSTCFFTSANSLAAILYGLLWIGLVPGTKSIRNSISLLG 3839 Score = 24.4 bits (47), Expect(3) = 3e-09 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 EI L E +LI+ I +G R I +L+ + TH IFL Sbjct: 4163 EIYLRENCSTFELIEQVINSG*RVLILDSNLIQRSIIHTHSLSMIFL 4023 Score = 43.7 bits (89), Expect(2) = 2e-04 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 4309 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 4184 Score = 22.6 bits (43), Expect(2) = 2e-04 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 4162 RSILEKTVAPSS*SNKSSILGKGYLFLIVTSFNAR*STHIL*V*SFF 4022
>LOC_Os09g01100:12009.t00012:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5412 Score = 69.3 bits (145), Expect(3) = 5e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 2860 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMLFGLTNAPAFFMNLMNKVFMEYLDK 3039 Score = 53.8 bits (111), Expect(3) = 5e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 2719 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 2868 Score = 51.5 bits (106), Expect(3) = 5e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 2542 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAP 2715 Score = 46.4 bits (95), Expect(3) = 6e-09 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ FKQ S +GG +I +D+ LM S Sbjct: 3021 KHLVHQIHEKGWGISESK*HNGTFKQTIPSCKGGLWYIFLTDSKLMIS 2878 Score = 29.5 bits (58), Expect(3) = 6e-09 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L + PF + SST F + S L PG KSI Sbjct: 2714 GAPHGEVLGLIYPF*SKSSTCFFTSANSLAAILYGLLWIGLVPGTKSI 2571 Score = 22.6 bits (43), Expect(3) = 6e-09 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 2870 RSILEKTVAPSS*SNRSSILGRGYLFLIVTSFNAR*STHIL*V*SFF 2730 Score = 44.1 bits (90), Expect = 0.004 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 3017 TLFIRFMKKAGALVSPNNITVHSNKPYRVVKAVFGISSSRIR 2892
>LOC_Os09g23850:12009.t02068:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5340 Score = 68.9 bits (144), Expect(3) = 5e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1159 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 1338 Score = 52.8 bits (109), Expect(3) = 5e-31 Identities = 23/58 (39%), Positives = 38/58 (65%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S+SP P Sbjct: 841 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSLSPWGAP 1014 Score = 52.8 bits (109), Expect(3) = 5e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1018 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1167 Score = 44.1 bits (90), Expect(2) = 8e-06 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 1316 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1194 Score = 27.2 bits (53), Expect(2) = 8e-06 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1169 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWVWSFF 1029 Score = 33.1 bits (66), Expect = 8.8 Identities = 19/48 (39%), Positives = 28/48 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K LIHQVH+ + I +SK H+ F+QP S + +I D+ L+ S Sbjct: 1320 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLVIS 1177
>LOC_Os04g05710:12004.t00452:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5141 Score = 65.7 bits (137), Expect(3) = 5e-31 Identities = 27/60 (45%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+++ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 2640 KIDLRSGYHQLKIRTGDIPKTAFSTRYGLYKFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2819 Score = 60.2 bits (125), Expect(3) = 5e-31 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 2499 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 2648 Score = 48.7 bits (100), Expect(3) = 5e-31 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 2322 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 2501 Query: 2232 HAKER 2246 K++ Sbjct: 2502 FVKKK 2516 Score = 36.8 bits (74), Expect = 0.70 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA LS*S S RG G L+L V + S H+ PSFF Sbjct: 2650 RSILENTLAPLS*SKRSSIRGSGYLFLIVTSFSER*STHILMLPSFF 2510
>LOC_Os01g63120:12001.t05682:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 4452 Score = 70.3 bits (147), Expect(3) = 5e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GL+E VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2014 KIDLRSGYHQLRIREEDIPKTAFTTRYGLYECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2193 Score = 55.1 bits (114), Expect(3) = 5e-31 Identities = 17/50 (34%), Positives = 34/50 (68%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1873 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 2022 Score = 49.2 bits (101), Expect(3) = 5e-31 Identities = 24/60 (40%), Positives = 35/60 (58%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL PG + RM+ E +K++V+E LQKG+IR S SP P Sbjct: 1690 TTMPPKREIEFRIDLAPGTAAIYKRPYRMAANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1869 Score = 40.0 bits (81), Expect(3) = 6e-10 Identities = 20/46 (43%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FI+ +K GA SP +T HS NP + KAVF S I Sbjct: 2186 RNSMNTLFIRFMKNAGALVSPKDITVHSYNPYRVVKAVFGISSSRI 2049 Score = 34.1 bits (68), Expect(3) = 6e-10 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA S*SN S RG G L+L V L+ S H+ SFF Sbjct: 2024 RSILENTLAPFS*SNKSSIRGKGYLFLIVTSLSAR*STHILFVLSFF 1884 Score = 28.1 bits (55), Expect(3) = 6e-10 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFC+ SST Sbjct: 1868 GAPQGEVLGRMYPFCSCSST 1809 Score = 34.1 bits (68), Expect = 4.7 Identities = 13/46 (28%), Positives = 19/46 (41%) Frame = +1 / +1 Query: 1174 NRVEEKTAPPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 NR P +P P + K + C+ CG+ GH + CP Sbjct: 970 NRGAAPRPPMAPAQPAPSAQAKKETGTKPGSCFNCGELGHFADKCP 1107
>LOC_Os06g19930:12006.t01810:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4419 Score = 67.0 bits (140), Expect(3) = 5e-31 Identities = 28/60 (46%), Positives = 41/60 (68%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KT + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1867 KIDLRSGYHQLRIKEEDIPKTTFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2046 Score = 54.2 bits (112), Expect(3) = 5e-31 Identities = 24/58 (41%), Positives = 38/58 (65%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG +L + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1549 MPPKRDIEFRIDLVPGTTLIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1722 Score = 53.3 bits (110), Expect(3) = 5e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1726 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATIFSKID 1875 Score = 43.7 bits (89), Expect(2) = 2e-05 Identities = 21/41 (51%), Positives = 23/41 (56%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK IK GA SP +T HSNNP + K V S LI Sbjct: 2024 TLFIKFIKKAGALVSPKDITVHSNNPYLVVKVVLGISSSLI 1902 Score = 26.3 bits (51), Expect(2) = 2e-05 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = -2 / -2 Query: 2357 LAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1856 VAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWVWSFF 1737 Score = 33.6 bits (67), Expect = 6.4 Identities = 19/46 (41%), Positives = 26/46 (56%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVHK + I +SK H F+QP S + +I D+ L+ Sbjct: 2028 KHLIHQVHKESRGIGKSKRHHSTFEQPIPSGKSCLRYIFLFDSQLV 1891
>LOC_Os10g28930:12010.t02242:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 68.4 bits (143), Expect(3) = 5e-31 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1888 KIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2067 Score = 57.4 bits (119), Expect(3) = 5e-31 Identities = 19/50 (38%), Positives = 34/50 (68%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKD S MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDSSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1896 Score = 48.7 bits (100), Expect(3) = 5e-31 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 1570 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764
>LOC_Os01g23200:12001.t02047:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4338 Score = 67.5 bits (141), Expect(3) = 5e-31 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1813 KIDLRSGYHQLKIRTGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 1992 Score = 58.3 bits (121), Expect(3) = 5e-31 Identities = 20/50 (40%), Positives = 34/50 (68%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + K+T++ ++P+P +D + D L A++F+K+D Sbjct: 1672 LFVKKKDGSMRMCVDYRSLNKVTIKNKYPLPWIDDLFDQLKGAKVFSKID 1821 Score = 48.7 bits (100), Expect(3) = 5e-31 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 1495 MPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1674 Query: 2232 HAKER 2246 K++ Sbjct: 1675 FVKKK 1689 Score = 35.4 bits (71), Expect = 1.8 Identities = 20/47 (42%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA LS*S S G G L+L V + S H+ PSFF Sbjct: 1823 RSILENTLAPLS*SKRSSIHGSGYLFLIVTLFSDR*STHILMLPSFF 1683
>LOC_Os12g16050:12012.t01458:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4329 Score = 68.9 bits (144), Expect(3) = 5e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1867 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2046 Score = 52.8 bits (109), Expect(3) = 5e-31 Identities = 24/65 (36%), Positives = 40/65 (61%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1549 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVI 1728 Query: 2232 HAKER 2246 K++ Sbjct: 1729 FVKKK 1743 Score = 52.8 bits (109), Expect(3) = 5e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1726 IFVKKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1875 Score = 44.1 bits (90), Expect(2) = 8e-06 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2024 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1902 Score = 27.2 bits (53), Expect(2) = 8e-06 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1877 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWV*SFF 1737 Score = 29.9 bits (59), Expect(2) = 4.2 Identities = 11/39 (28%), Positives = 19/39 (48%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V +Q + + + ++ C+ CG GH + CP Sbjct: 859 APRPVAVSTQQQPAKREQGSKPVVCFNCGDPGHYADKCP 975 Score = 28.1 bits (55), Expect(2) = 4.2 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +2 / +3 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 +V*M + WT +C +L+ LDE Sbjct: 1950 IV*MYCYVFWTYQCPCFLHELDE 2018
>LOC_Os02g18340:12002.t01627:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 5245 Score = 68.9 bits (144), Expect(4) = 5e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++R+HQ+RI+ D KTA + GLFE VM GL+NAP+ FM+LMN+V ++L + Sbjct: 2941 KIDLRSRYHQLRIKEEDIPKTAFTTRYGLFECTVMSVGLTNAPAFFMNLMNKVFMEYLDK 3120 Score = 51.9 bits (107), Expect(4) = 5e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 2800 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKDATVFSKID 2949 Score = 51.0 bits (105), Expect(4) = 5e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 2623 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 2796 Score = 38.2 bits (77), Expect(4) = 5e-31 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P Q + + + N+ C+ CG+ GH S CP Sbjct: 1933 APRPVATPTQHQPAKREQGNKPGVCFNCGEPGHYSDKCP 2049 Score = 42.8 bits (87), Expect(2) = 1e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -3 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 3098 TLFIKFMKKAGALVSPTDITVHSNNPYRVVKAVLGISSSLI 2976 Score = 27.6 bits (54), Expect(2) = 1e-05 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -3 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A+LS*SN S G G L+L V + S H+ SFF Sbjct: 2951 RSILEKTVASLS*SNKSSILGRGYLFLIVTSFSAR*STHILWV*SFF 2811
>LOC_Os07g16570:12007.t01517:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3186 Score = 68.9 bits (144), Expect(4) = 5e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1870 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2049 Score = 53.3 bits (110), Expect(4) = 5e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1729 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATIFSKID 1878 Score = 51.0 bits (105), Expect(4) = 5e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1552 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1725 Score = 34.5 bits (69), Expect(4) = 5e-31 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + ++ C+ CG GH + CP Sbjct: 862 APRPVAAPAQQQPAKREQGSKPVVCFNCGDPGHYADKCP 978 Score = 44.1 bits (90), Expect(2) = 3e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2027 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1905 Score = 25.4 bits (49), Expect(2) = 3e-05 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = -2 / -2 Query: 2357 LAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +A LS*SN S G G L+L V S H+ SFF Sbjct: 1859 VAPLS*SNKSSILGSGYLFLIVTSFRAR*STHILWVWSFF 1740 Score = 31.3 bits (62), Expect(2) = 0.75 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K IHQVH+ + I +SK H+ F+QP S + +I D+ L+ S Sbjct: 2031 KHFIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLVIS 1888 Score = 22.6 bits (43), Expect(2) = 0.75 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLWRE 2230 +I L E S KLI+ I +G R I ++ V TH +FL+ + Sbjct: 1881 KIYLGENSSTFKLIKQIINSG*RILILDSHII*GTIVHTHPLGMVFLFHK 1732
>LOC_Os06g07290:12006.t00612:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5483 Score = 68.9 bits (144), Expect(4) = 5e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 2932 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 3111 Score = 52.8 bits (109), Expect(4) = 5e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 2791 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 2940 Score = 52.4 bits (108), Expect(4) = 5e-31 Identities = 24/58 (41%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V+ELLQKG+IR S SP P Sbjct: 2614 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDELLQKGYIRPSSSPWGAP 2787 Score = 35.9 bits (72), Expect(4) = 5e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 1924 APRPVAVPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 2040 Score = 44.1 bits (90), Expect(3) = 3e-09 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -1 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 3089 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 2967 Score = 29.5 bits (58), Expect(3) = 3e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -1 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+NSST Sbjct: 2786 GAPHGDELGLMYPFCSNSST 2727 Score = 25.8 bits (50), Expect(3) = 3e-09 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 2942 RSILEKTVAPLS*SNKSSILGNGYLFLIVTSFSAR*STHIL*VWSFF 2802 Score = 34.5 bits (69), Expect(2) = 4e-04 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -3 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 3093 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 2956 Score = 30.9 bits (61), Expect(2) = 4e-04 Identities = 18/65 (27%), Positives = 28/65 (43%) Frame = -2 / -3 Query: 2279 TLMSVHMCQDPSFFGVSRGYRTWANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETC 2100 T++ H F + W T S+V L QF++ L + L HS + +C Sbjct: 2841 TIVHTHSLSMVFLFHKNNRSSPW**TRSDVSFL*QFIYLPLNFCQLIGCHSIRSLMDRSC 2662 Query: 2099 SRNQV 2085 SR Q+ Sbjct: 2661 SRYQI 2647
>LOC_Os08g14250:12008.t01300:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5073 Score = 68.9 bits (144), Expect(4) = 6e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 2521 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPTFFMNLMNKVFMEYLDK 2700 Score = 52.8 bits (109), Expect(4) = 6e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 2380 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 2529 Score = 51.0 bits (105), Expect(4) = 6e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 2203 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 2376 Score = 36.8 bits (74), Expect(4) = 6e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 1513 APRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 1629 Score = 45.1 bits (92), Expect(3) = 8e-09 Identities = 21/41 (51%), Positives = 25/41 (60%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K +GA SP +T HSNNP + KAV S LI Sbjct: 2678 TLFIKFMKKVGALVSPKDITVHSNNPYLVVKAVLGISSSLI 2556 Score = 26.7 bits (52), Expect(3) = 8e-09 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 2375 GAPHGDELGLMYPFCSKSST 2316 Score = 26.3 bits (51), Expect(3) = 8e-09 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 2531 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 2391 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 2682 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 2545
>LOC_Os10g12160:12010.t01002:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7828 Score = 68.9 bits (144), Expect(3) = 6e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 5276 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 5455 Score = 52.8 bits (109), Expect(3) = 6e-31 Identities = 26/68 (38%), Positives = 41/68 (60%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 4959 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGSPVI 5138 Query: 2232 HAKERWIL 2255 K + IL Sbjct: 5139 FWKRKTIL 5162 Score = 52.4 bits (108), Expect(3) = 6e-31 Identities = 17/46 (36%), Positives = 31/46 (67%) Frame = +1 / +2 Query: 2239 KKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 5147 KKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 5284 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 5433 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 5311 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 5286 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 5146 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -1 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 5131 GDPHGDELGLMYPFCSKSST 5072 Score = 33.1 bits (66), Expect(2) = 2.9 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = +1 / +3 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG H + CP Sbjct: 4269 APRPVAAPAQQQPAKREQGNKPVVCFNCGDPRHYADKCP 4385 Score = 26.3 bits (51), Expect(2) = 2.9 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 / +1 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 VV M + WT +C +L+ LDE Sbjct: 5359 VVRMYCYVFWTYQCPCFLHELDE 5427 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 5437 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 5300
>LOC_Os12g19770:12012.t01820:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6363 Score = 70.7 bits (148), Expect(3) = 6e-31 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 3811 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 3990 Score = 51.9 bits (107), Expect(3) = 6e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3670 IFVEKKDKTKRMCVDYRAHNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 3819 Score = 51.5 bits (106), Expect(3) = 6e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 3487 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 3666 Score = 42.8 bits (87), Expect(3) = 2e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 3983 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 3846 Score = 29.9 bits (59), Expect(3) = 2e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 3665 GAPQGDVLGRMYPFCNCSST 3606 Score = 27.6 bits (54), Expect(3) = 2e-09 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L S H+ SFF Sbjct: 3821 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLCAR*STHILLVLSFF 3681 Score = 35.4 bits (71), Expect = 1.8 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ C+ ES+ H+ F+QP Sbjct: 3990 LV*KFHKHLVHQIHEEGRCVSESERHNCAFEQP 3892
>LOC_Os09g10540:12009.t00846:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6260 Score = 70.3 bits (147), Expect(3) = 6e-31 Identities = 29/60 (48%), Positives = 43/60 (71%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE +VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4077 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECIVMSFGLTNAPAFFMNLMNKVFMEYLDK 4256 Score = 52.8 bits (109), Expect(3) = 6e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 3936 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 4085 Score = 51.0 bits (105), Expect(3) = 6e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3759 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 3932 Score = 43.7 bits (89), Expect(2) = 1e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 4234 TLFIKFMKKAGALVSPKDITIHSNNPYLVVKAVLGISSSLI 4112 Score = 26.7 bits (52), Expect(2) = 1e-05 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V S H+ SFF Sbjct: 4087 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFNAR*STHILWV*SFF 3947 Score = 32.2 bits (64), Expect(2) = 0.40 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLS 2427 K LIHQVH+ + I +SK H+ F+QP S Sbjct: 4238 KHLIHQVHEESRGIGKSKRHNNTFEQPIPS 4149 Score = 22.6 bits (43), Expect(2) = 0.40 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLWRE 2230 +I L E S KLI+ I +G R I ++ V TH IFL+ + Sbjct: 4088 KIYLGENSSTFKLIKQIINSG*RVLILDSHII*CTIVHTHPLGMIFLFHK 3939 Score = 34.5 bits (69), Expect(2) = 0.99 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 / +3 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + ++ C+ CG GH + CP Sbjct: 3069 APRPVAAPTQQQPAKREQGSKPVVCFNCGDPGHYADKCP 3185 Score = 26.3 bits (51), Expect(2) = 0.99 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 / +2 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 VV M + WT +C +L+ LDE Sbjct: 4160 VVRMYCYVFWTYQCPCFLHELDE 4228
>LOC_Os10g12530:12010.t01030:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5495 Score = 70.3 bits (147), Expect(3) = 6e-31 Identities = 29/60 (48%), Positives = 43/60 (71%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE +VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4080 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECIVMSFGLTNAPAFFMNLMNKVFMEYLDK 4259 Score = 52.8 bits (109), Expect(3) = 6e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 3939 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 4088 Score = 51.0 bits (105), Expect(3) = 6e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3762 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 3935 Score = 43.7 bits (89), Expect(2) = 1e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 4237 TLFIKFMKKAGALVSPKDITIHSNNPYLVVKAVLGISSSLI 4115 Score = 27.2 bits (53), Expect(2) = 1e-05 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 4090 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWV*SFF 3950
>LOC_Os10g09970:12010.t00809:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5003 Score = 68.9 bits (144), Expect(3) = 6e-31 Identities = 30/60 (50%), Positives = 41/60 (68%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI + +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4011 KIDLHSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4190 Score = 53.8 bits (111), Expect(3) = 6e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3870 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 4019 Score = 51.5 bits (106), Expect(3) = 6e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3693 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAP 3866 Score = 45.5 bits (93), Expect(3) = 2e-09 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 4172 KHLVHQIHEKGWGISESKRHNGTFEQTIPSCEGGLWYIFLTDSKLMIS 4029 Score = 31.3 bits (62), Expect(3) = 2e-09 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 3865 GAPHGEVLGLMYPF*SKSSTCFFTSANSLAAILYGLLWMGLVPGTKSI 3722 Score = 23.5 bits (45), Expect(3) = 2e-09 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFL 2239 EI L E +LI+ I +G R I +L+ + TH IFL Sbjct: 4022 EIYLGENCSTFELIKQVINSG*RIFILDSNLIQRSIIHTHSLSMIFL 3882 Score = 43.7 bits (89), Expect(2) = 2e-04 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 4168 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 4043 Score = 22.6 bits (43), Expect(2) = 2e-04 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V S H+ SFF Sbjct: 4021 RSILEKTVAPSS*SNRSSILGRGYLFLIVTSFNAR*STHIL*V*SFF 3881
>LOC_Os01g26760:12001.t02356:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4892 Score = 70.3 bits (147), Expect(3) = 6e-31 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 3789 KIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 3968 Score = 53.8 bits (111), Expect(3) = 6e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 3648 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKID 3797 Score = 50.1 bits (103), Expect(3) = 6e-31 Identities = 22/58 (37%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR + SP P Sbjct: 3471 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPNTSPWGAP 3644 Score = 45.1 bits (92), Expect(3) = 1e-09 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ F+Q S +GG +I +D+ LM S Sbjct: 3950 KHLVHQIHEKGWGISESK*HNGTFEQTIPSCEGGLWYIFLTDSKLMIS 3807 Score = 31.8 bits (63), Expect(3) = 1e-09 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L M PF + SST F + S L PG KSI Sbjct: 3643 GAPHGEVLGLMYPF*SKSSTCLFTSANSLAAILYGLLWMGLVPGTKSI 3500 Score = 24.0 bits (46), Expect(3) = 1e-09 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFFGVS 2229 +S +A S*SN S G G L+L V S H+ SFF + Sbjct: 3799 RSILEKTVAPSS*SNRSSILGRGYLFLIVTSFNAR*STHILWV*SFFSTN 3650 Score = 43.7 bits (89), Expect = 0.006 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 3946 TLFIRFMKKAGALVSPNDITVHSNKPYRVVKAVFGISSSRIR 3821
>LOC_Os08g25330:12008.t02301:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4575 Score = 68.9 bits (144), Expect(3) = 6e-31 Identities = 29/53 (54%), Positives = 38/53 (71%) Frame = +3 / +1 Query: 2376 FHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2044 YHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 53.8 bits (111), Expect(3) = 6e-31 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2031 Score = 51.5 bits (106), Expect(3) = 6e-31 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 1878 Score = 42.8 bits (87), Expect(3) = 4e-10 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.9 bits (59), Expect(3) = 4e-10 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A S*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENTVAPFS*SNRSSILGKGYLFLIVTSLSAR*STHILLVLSFF 1893 Score = 29.9 bits (59), Expect(3) = 4e-10 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDVLGRMYPFCNCSST 1818 Score = 35.4 bits (71), Expect(2) = 0.75 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ C+ ES+ H+ F+QP Sbjct: 2202 LV*KFHKHLVHQIHEEGRCVSESERHNCAFEQP 2104 Score = 25.4 bits (49), Expect(2) = 0.75 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F++ LL + L +HS + SR QVN L+ Sbjct: 1851 ADVSLL*LFINLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 1723
>LOC_Os11g26500:12011.t02266:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4426 Score = 68.9 bits (144), Expect(3) = 6e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1874 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPTFFMNLMNKVFMEYLDK 2053 Score = 53.3 bits (110), Expect(3) = 6e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1733 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATIFSKID 1882 Score = 51.9 bits (107), Expect(3) = 6e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1556 MPPKRDIEFRIDLVPGTTPIHKRPYRMATNEFAEVKRQVDDLLQKGYIRPSSSPWGAP 1729 Score = 45.1 bits (92), Expect(2) = 1e-05 Identities = 21/41 (51%), Positives = 25/41 (60%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K +GA SP +T HSNNP + KAV S LI Sbjct: 2031 TLFIKFMKKVGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1909 Score = 25.4 bits (49), Expect(2) = 1e-05 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = -2 / -2 Query: 2357 LAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +A LS*SN S G G L+L V S H+ SFF Sbjct: 1863 VAPLS*SNKSSILGSGYLFLIVTSFRAR*STHILWV*SFF 1744
>LOC_Os03g42950:12003.t03695:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 3681 Score = 68.9 bits (144), Expect(3) = 6e-31 Identities = 28/60 (46%), Positives = 43/60 (71%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN++ ++L Q Sbjct: 1620 KIDLRSGYHQLKIRQEDIPKTAFVIRYGLYEFTVMAFGLTNAPAYFMNLMNKIFMEYLDQ 1799 Score = 62.0 bits (129), Expect(3) = 6e-31 Identities = 21/50 (42%), Positives = 35/50 (70%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D +V+ ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1479 LFVKKKDGSLRMCVDYRVLNEVTIKNKYPLPRIDDLFDQLKGASIFSKID 1628 Score = 43.2 bits (88), Expect(3) = 6e-31 Identities = 21/59 (35%), Positives = 34/59 (57%) Frame = +3 / +3 Query: 2070 IQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPAHAKER 2246 I++ I+L+PG + + RM E + LK+++ EL +KG IR S SP P K++ Sbjct: 1320 IEFIIELLPGTTPISKRSYRMPINELEELKKQIAELQEKGFIRPSSSPWGAPVLFVKKK 1496 Score = 38.2 bits (77), Expect(2) = 6e-06 Identities = 18/39 (46%), Positives = 24/39 (61%) Frame = -3 / -3 Query: 2506 FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 FI+ +K GA +PN +T +S NP + KAVF S LI Sbjct: 1771 FIRFMK*AGALVNPNAITVNSYNPYLITKAVFGMSSCLI 1655 Score = 33.6 bits (67), Expect(2) = 6e-06 Identities = 20/47 (42%), Positives = 25/47 (53%) Frame = -2 / -3 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA +*SN S G G L+L V T S H+ + PSFF Sbjct: 1630 RSILENILAPFN*SNRSSILGRGYLFLIVTSFRTR*STHILKLPSFF 1490
>LOC_Os04g04510:12004.t00337:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2949 Score = 68.9 bits (144), Expect(3) = 7e-31 Identities = 28/60 (46%), Positives = 43/60 (71%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E++VM FGL+NAP+ FM+LMN+V +L + Sbjct: 631 KIDLRSGYHQLKIRTGDIPKTAFSTRYGLYEFIVMSFGLTNAPAYFMNLMNKVFMDYLDK 810 Score = 57.9 bits (120), Expect(3) = 7e-31 Identities = 19/50 (38%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + + L A++F+K+D Sbjct: 490 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFNHLKGAKVFSKID 639 Score = 47.3 bits (97), Expect(3) = 7e-31 Identities = 23/65 (35%), Positives = 36/65 (55%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P I++ IDLIPG + + RM E + LK+++ EL +KG +R S SP P Sbjct: 313 MPPDHDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 492 Query: 2232 HAKER 2246 K++ Sbjct: 493 FVKKK 507
>LOC_Os09g01070:12009.t00009:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5311 Score = 68.9 bits (144), Expect(4) = 7e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 2759 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2938 Score = 52.8 bits (109), Expect(4) = 7e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 2618 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 2767 Score = 51.0 bits (105), Expect(4) = 7e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 2176 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 2349 Score = 36.8 bits (74), Expect(4) = 7e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 1486 APRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 1602 Score = 44.1 bits (90), Expect(2) = 8e-06 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2916 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 2794 Score = 27.2 bits (53), Expect(2) = 8e-06 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 2769 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWV*SFF 2629 Score = 51.0 bits (105), Expect(2) = 2e-05 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 2441 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 2614 Score = 26.3 bits (51), Expect(2) = 2e-05 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 / +1 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 VV M + WT +C +L+ LDE Sbjct: 2842 VVRMYCYVFWTYQCPCFLHELDE 2910 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 2920 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 2783
>LOC_Os12g24364:12012.t02165:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6658 Score = 67.0 bits (140), Expect(5) = 7e-31 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ F++LMN+V ++L + Sbjct: 4106 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFVNLMNKVFMEYLDK 4285 Score = 52.8 bits (109), Expect(5) = 7e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 3965 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 4114 Score = 51.0 bits (105), Expect(5) = 7e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3788 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 3961 Score = 36.3 bits (73), Expect(5) = 7e-31 Identities = 13/49 (26%), Positives = 24/49 (48%) Frame = +1 / +2 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCPLRKFVNTTIH 1341 AP V P +Q + + + ++ C+ CG GH + CP + V ++ Sbjct: 3140 APRPVAAPTQQQPAKREQGSKSVVCFNCGDPGHYADKCPKPRRVKARVN 3286 Score = 24.9 bits (48), Expect(5) = 7e-31 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +3 / +1 Query: 201 WYQSPVDP 224 WYQSP+DP Sbjct: 748 WYQSPLDP 771 Score = 40.9 bits (83), Expect(2) = 1e-04 Identities = 20/41 (48%), Positives = 22/41 (53%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK K GA SP +T HSNNP + AV S LI Sbjct: 4263 TLFIKFTKKAGALVSPKDITVHSNNPYLVVNAVLGISSSLI 4141 Score = 26.3 bits (51), Expect(2) = 1e-04 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V S H+ SFF Sbjct: 4116 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFRAR*STHILWV*SFF 3976
>LOC_Os10g11702:12010.t00967:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4428 Score = 68.9 bits (144), Expect(4) = 7e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1876 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2055 Score = 52.8 bits (109), Expect(4) = 7e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1735 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1884 Score = 51.0 bits (105), Expect(4) = 7e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1558 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1731 Score = 35.9 bits (72), Expect(4) = 7e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 868 APRPVAVPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 984 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2033 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1911 Score = 26.7 bits (52), Expect(3) = 2e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 1730 GAPHGDELGLMYPFCSKSST 1671 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1886 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 1746 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 2037 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 1900
>LOC_Os01g47150:12001.t04163:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4428 Score = 68.9 bits (144), Expect(4) = 7e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1876 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2055 Score = 52.8 bits (109), Expect(4) = 7e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1735 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1884 Score = 51.0 bits (105), Expect(4) = 7e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1558 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1731 Score = 35.9 bits (72), Expect(4) = 7e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 868 APRPVAVPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 984 Score = 44.1 bits (90), Expect(3) = 9e-09 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2033 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1911 Score = 27.2 bits (53), Expect(3) = 9e-09 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1886 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWVWSFF 1746 Score = 26.7 bits (52), Expect(3) = 9e-09 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 1730 GAPHGDELGLMYPFCSKSST 1671 Score = 34.5 bits (69), Expect(2) = 1.8 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 2037 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 1900 Score = 24.9 bits (48), Expect(2) = 1.8 Identities = 8/21 (38%), Positives = 12/21 (57%) Frame = -2 / -1 Query: 2123 VWKIRETCSRNQVNTILNSFY 2061 +W I CSR+ + T L +Y Sbjct: 1092 IWSILSFCSRDMIYTSLGCWY 1030
>LOC_Os10g20190:12010.t01513:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5477 Score = 68.9 bits (144), Expect(4) = 7e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 2925 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 3104 Score = 52.8 bits (109), Expect(4) = 7e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 2784 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 2933 Score = 51.0 bits (105), Expect(4) = 7e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 2607 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 2780 Score = 36.8 bits (74), Expect(4) = 7e-31 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +3 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 1917 APRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 2033 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 3082 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 2960 Score = 26.7 bits (52), Expect(3) = 2e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 2779 GAPHGDELGLMYPFCSKSST 2720 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 2935 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 2795 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 3086 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 2949
>LOC_Os12g43050:12012.t03977:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6781 Score = 69.8 bits (146), Expect(4) = 7e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4292 KIDLRSGYHQLRIKEEDIHKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4471 Score = 52.8 bits (109), Expect(4) = 7e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 4151 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 4300 Score = 50.1 bits (103), Expect(4) = 7e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3974 MPPKRDIEFRIDLVPGTTPIH*RPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 4147 Score = 37.7 bits (76), Expect(4) = 7e-31 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +1 / +2 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + K + ++ C+ CG+ GH S CP Sbjct: 3284 APLPVAAPTQQQPAKKEQGSKPGVCFNCGEPGHYSDKCP 3400 Score = 43.7 bits (89), Expect(3) = 4e-10 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 4449 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLCISSSLI 4327 Score = 31.8 bits (63), Expect(3) = 4e-10 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = -2 / -1 Query: 2213 WANTFSNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILNSFYR 2058 W T+SNV L+Q ++ L + HS + +CS Q+ + N +R Sbjct: 4135 WRRTWSNVSFLKQIIYLPLDFC*FIGCHSIRSLMDRSCSWYQIYSEFNISFR 3980 Score = 27.2 bits (53), Expect(3) = 4e-10 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 4302 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWV*SFF 4162 Score = 35.9 bits (72), Expect(2) = 0.020 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ FKQP S + +I D+ L+ Sbjct: 4453 KHLIHQVHEESGGIGKSKRHNSTFKQPISSGKSRLMYIFLFDSQLV 4316 Score = 23.5 bits (45), Expect(2) = 0.020 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLWRE 2230 EI L E KLI+ I +G R I ++ V TH IFL+ + Sbjct: 4303 EIYLGENGGTFKLIKQIINSGQRVLILDSHII*CTIVHTHPLGMIFLFHK 4154
>LOC_Os10g18580:12010.t01406:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3285 Score = 68.9 bits (144), Expect(4) = 8e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1870 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2049 Score = 52.8 bits (109), Expect(4) = 8e-31 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1729 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1878 Score = 51.0 bits (105), Expect(4) = 8e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1552 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1725 Score = 34.5 bits (69), Expect(4) = 8e-31 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + ++ C+ CG GH + CP Sbjct: 862 APRPVAAPTQQQPAKREQGSKPVVCFNCGDPGHYADKCP 978 Score = 44.1 bits (90), Expect(2) = 1e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2027 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1905 Score = 26.3 bits (51), Expect(2) = 1e-05 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V S H+ SFF Sbjct: 1880 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFRAR*STHILWVWSFF 1740
>LOC_Os12g11110:12012.t00988:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4120 Score = 68.9 bits (144), Expect(4) = 8e-31 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1871 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2050 Score = 53.8 bits (111), Expect(4) = 8e-31 Identities = 18/49 (36%), Positives = 32/49 (65%) Frame = +1 / +2 Query: 2230 LTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1733 LVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1879 Score = 51.0 bits (105), Expect(4) = 8e-31 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1552 MPPKRDIEFGIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGNIRPSSSPWGAP 1725 Score = 34.5 bits (69), Expect(4) = 8e-31 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + ++ C+ CG GH + CP Sbjct: 862 APRPVAAPTQQQPAKREQGSKPVVCFNCGDPGHYADKCP 978 Score = 44.1 bits (90), Expect(2) = 8e-06 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2028 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1906 Score = 27.2 bits (53), Expect(2) = 8e-06 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1881 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWV*SFF 1741 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ FKQP S + +I D+ L+ Sbjct: 2032 KHLIHQVHEESRGIGKSKRHNSTFKQPIPSGKSCLRYIFLFDSQLV 1895
>LOC_Os01g34250:12001.t02985:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 67.5 bits (141), Expect(3) = 9e-31 Identities = 28/60 (46%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1888 KIDLRSGYHQLKIRTGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2067 Score = 60.2 bits (125), Expect(3) = 9e-31 Identities = 20/50 (40%), Positives = 35/50 (70%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKID 1896 Score = 46.0 bits (94), Expect(3) = 9e-31 Identities = 22/65 (33%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLI G + + RM E + LK+++ EL +KG +R S+SP P Sbjct: 1570 MPPDRDIEFIIDLILGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSLSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764 Score = 36.8 bits (74), Expect = 0.70 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA LS*S S RG G L+L V + S H+ PSFF Sbjct: 1898 RSILENTLAPLS*SKRSSIRGSGYLFLIVTSFSER*STHILMLPSFF 1758
>LOC_Os05g22810:12005.t01940:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 68.9 bits (144), Expect(4) = 1e-30 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1870 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2049 Score = 52.8 bits (109), Expect(4) = 1e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1729 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1878 Score = 51.0 bits (105), Expect(4) = 1e-30 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1552 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1725 Score = 35.4 bits (71), Expect(4) = 1e-30 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH CP Sbjct: 862 APRPVAVPAQQQPAKREQGNKPVVCFNCGDPGHYDDKCP 978 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2027 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1905 Score = 26.7 bits (52), Expect(3) = 2e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 1724 GAPHGDELGLMYPFCSKSST 1665 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1880 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 1740 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 2031 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 1894
>LOC_Os04g18600:12004.t01602:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5492 Score = 68.9 bits (144), Expect(4) = 1e-30 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 2940 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 3119 Score = 52.8 bits (109), Expect(4) = 1e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 2799 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 2948 Score = 51.0 bits (105), Expect(4) = 1e-30 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 2622 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 2795 Score = 36.3 bits (73), Expect(4) = 1e-30 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 / +3 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP + P +Q + + + N+ C+ CG GH + CP Sbjct: 1932 APRPIAAPTQQQPAKREQGNKPVVCFNCGDPGHYADKCP 2048 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 3097 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 2975 Score = 26.7 bits (52), Expect(3) = 2e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 2794 GAPHGDELGLMYPFCSKSST 2735 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 2950 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 2810 Score = 34.5 bits (69), Expect = 3.4 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 3101 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYIFLFDSQLM 2964
>LOC_Os10g06520:12010.t00521:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8624 Score = 69.3 bits (145), Expect(3) = 1e-30 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4607 KIDLRSGYHQLRIREEDIPKTAFTIRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4786 Score = 52.4 bits (108), Expect(3) = 1e-30 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 4466 IFVEKKDHTQRMCVDYRALIEVTIKNKYPLPRIDDLFDQLEGATVFSKID 4615 Score = 51.5 bits (106), Expect(3) = 1e-30 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 4289 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAP 4462 Score = 44.1 bits (90), Expect(3) = 1e-09 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 / -3 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 T FI+ +K GA SPN +T HSN P + KAVF S IR Sbjct: 4764 TLFIRFMKKAGALVSPNDITVHSNKPYRIVKAVFGISSSRIR 4639 Score = 32.7 bits (65), Expect(3) = 1e-09 Identities = 18/48 (37%), Positives = 22/48 (45%) Frame = -3 / -3 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSI 2081 G HG +L R+ PF + SST F + S L PG KSI Sbjct: 4461 GAPHGEVLGRIYPF*SKSSTCFFTSANSLAAILYGLLWIGLVPGTKSI 4318 Score = 24.0 bits (46), Expect(3) = 1e-09 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = -2 / -3 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A S*SN S G G L+L V + S H+ SFF Sbjct: 4617 RSILEKTVAPSS*SNRSSILGSGYLFLIVTSINAR*STHIL*V*SFF 4477 Score = 42.8 bits (87), Expect = 0.011 Identities = 20/48 (41%), Positives = 29/48 (60%) Frame = -2 / -2 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLMKS 2373 K L+HQ+H+ W I ESK H+ KQ + +GG +I +D+ LM S Sbjct: 4768 KHLVHQIHEKGWGISESK*HNGTLKQTIPNCEGGLWYIFLTDSKLMIS 4625
>LOC_Os12g30340:12012.t02741:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7354 Score = 70.7 bits (148), Expect(3) = 1e-30 Identities = 31/60 (51%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 5387 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 5566 Score = 53.8 bits (111), Expect(3) = 1e-30 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 5246 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 5395 Score = 48.7 bits (100), Expect(3) = 1e-30 Identities = 23/60 (38%), Positives = 35/60 (58%) Frame = +3 / +2 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + M E +K++V+E LQKG+IR S SP P Sbjct: 5063 TTMPPKRDIEFRIDLVPGTAPIHKRPYSMGANELAEVKKQVDEQLQKGYIRPSTSPWGAP 5242 Score = 42.8 bits (87), Expect(3) = 1e-09 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 5559 RNSINTLFIKFMKKAGALVSPKDITVHSNNPYRVMNAVFGISSSRI 5422 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 5241 GAPQGDVLGRMYPFCNCSST 5182 Score = 28.6 bits (56), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 5397 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 5257 Score = 36.3 bits (73), Expect = 0.96 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K LIHQ+H+ CI ES+ H+ F+QP Sbjct: 5566 LV*KFHKHLIHQIHEEGRCISESERHNCAFEQP 5468
>LOC_Os04g16510:12004.t01410:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6177 Score = 70.3 bits (147), Expect(3) = 1e-30 Identities = 29/60 (48%), Positives = 43/60 (71%) Frame = +3 / +3 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GL+E+ VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4113 KIDLRSGYHQLRIREEDIPKTAFTTRYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4292 Score = 57.0 bits (118), Expect(3) = 1e-30 Identities = 19/50 (38%), Positives = 34/50 (68%) Frame = +1 / +3 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D M D L AA +F+K+D Sbjct: 3972 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDMFDQLKAATVFSKID 4121 Score = 46.0 bits (94), Expect(3) = 1e-30 Identities = 22/58 (37%), Positives = 34/58 (58%) Frame = +3 / +3 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL PG + RM+ E +K+++EEL +KG+IR S SP P Sbjct: 3795 MPPKREIEFRIDLAPGTTPQYKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPWGAP 3968 Score = 41.8 bits (85), Expect(2) = 1e-06 Identities = 24/47 (51%), Positives = 28/47 (59%) Frame = -2 / -3 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +AALS*SNI S RG G L+L V L L S H+ SFF Sbjct: 4123 RSILENTVAALS*SNISSIRGRGYLFLIVTSLRAL*STHILFVLSFF 3983 Score = 32.2 bits (64), Expect(2) = 1e-06 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -3 / -3 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLIR 2387 K T FIK +K GA PN +T +S +P + AV S IR Sbjct: 4285 KYSMNTLFIKFMKKAGALVKPNDITVNSYSPYRVVNAVLGISSSRIR 4145
>LOC_Os12g29380:12012.t02647:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4569 Score = 68.0 bits (142), Expect(3) = 1e-30 Identities = 30/60 (50%), Positives = 41/60 (68%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + G FE VM FGL+NAP+ FM+LMN+V +FL + Sbjct: 2017 KIDLRSGYHQLRIREEDIPKTAFITRYGSFECTVMSFGLTNAPAFFMNLMNKVFMEFLDK 2196 Score = 53.8 bits (111), Expect(3) = 1e-30 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1876 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKID 2025 Score = 51.5 bits (106), Expect(3) = 1e-30 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 1693 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGASELAEVKKQVDEQLQKGYIRPSTSPWGAP 1872 Score = 40.5 bits (82), Expect(3) = 5e-09 Identities = 20/46 (43%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSN+P + AVF S I Sbjct: 2189 RNSINTLFIKFMKKAGALVSPKDITVHSNDPYRVMNAVFGISSSRI 2052 Score = 29.9 bits (59), Expect(3) = 5e-09 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1871 GAPQGDVLGRMYPFCNCSST 1812 Score = 28.6 bits (56), Expect(3) = 5e-09 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2027 RSILENTVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1887 Score = 34.1 bits (68), Expect = 4.7 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ F++P Sbjct: 2196 LV*KFHKHLVHQIHEEGRCISESERHNCAFERP 2098
>LOC_Os03g35430:12003.t03032:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4425 Score = 69.3 bits (145), Expect(3) = 1e-30 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1873 KIDPRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2052 Score = 52.8 bits (109), Expect(3) = 1e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1732 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1881 Score = 51.0 bits (105), Expect(3) = 1e-30 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1555 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1728 Score = 44.1 bits (90), Expect(2) = 1e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2030 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1908 Score = 26.3 bits (51), Expect(2) = 1e-05 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = -2 / -2 Query: 2357 LAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1862 VAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWVWSFF 1743 Score = 33.6 bits (67), Expect(2) = 0.40 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + ++ C+ CG GH + CP Sbjct: 865 APRPVAAPTQQQPAKREQGSKPGVCFNCGDLGHYADKCP 981 Score = 28.1 bits (55), Expect(2) = 0.40 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +2 / +3 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 +V M + WT +C ++L+ LDE Sbjct: 1956 IVRMYCYVFWTYQCPRFLHELDE 2024
>LOC_Os02g19270:12002.t01720:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4422 Score = 69.3 bits (145), Expect(3) = 1e-30 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA K GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1870 KIDLRSGYHQLRIKEEDIPKTAFTTKYGLFECTVMSFGLTNAPAFFMNLMNKVFIEYLDK 2049 Score = 52.8 bits (109), Expect(3) = 1e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1729 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1878 Score = 51.0 bits (105), Expect(3) = 1e-30 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1552 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1725 Score = 44.1 bits (90), Expect(2) = 8e-06 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2027 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1905 Score = 27.2 bits (53), Expect(2) = 8e-06 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1880 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWV*SFF 1740 Score = 37.3 bits (75), Expect(2) = 0.011 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLS 2427 K L+HQVH+ + I +SK H+ FKQP LS Sbjct: 2031 KHLVHQVHEESGGIGKSKRHNSTFKQPILS 1942 Score = 23.1 bits (44), Expect(2) = 0.011 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = -1 / -1 Query: 2379 EI*LCEQSCRTKLIQHTIQAGNRESIPYGDLLNDFNVRTHVSRSIFLWRE 2230 +I L E KLI+ I +G R I D++ V TH IFL+ + Sbjct: 1881 KIDLGENGGTFKLIK*IINSGQRVLILDSDII*CTIVHTHPLGMIFLFHK 1732 Score = 30.9 bits (61), Expect(2) = 4.3 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 / +3 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 VV*M + WT +C ++L+ LDE Sbjct: 1953 VV*MYCYVFWTYQCPRFLHELDE 2021 Score = 27.2 bits (53), Expect(2) = 4.3 Identities = 11/39 (28%), Positives = 18/39 (46%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V Q + + + ++ C+ CG GH + CP Sbjct: 862 APRPVAALT*NQLAKREQGSKPGVCFNCGDLGHYADKCP 978
>LOC_Os01g60380:12001.t05419:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4419 Score = 69.3 bits (145), Expect(3) = 1e-30 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1867 KIDLRSGYHQLRIKEEDISKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2046 Score = 52.8 bits (109), Expect(3) = 1e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1726 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1875 Score = 51.0 bits (105), Expect(3) = 1e-30 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1549 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1722 Score = 44.6 bits (91), Expect(3) = 9e-09 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2024 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLDISSSLI 1902 Score = 26.7 bits (52), Expect(3) = 9e-09 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V S H+ SFF Sbjct: 1877 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFNAR*STHILWVWSFF 1737 Score = 26.7 bits (52), Expect(3) = 9e-09 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 1721 GAPHGDELGLMYPFCSKSST 1662
>LOC_Os07g33500:12007.t03029:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4413 Score = 65.2 bits (136), Expect(3) = 1e-30 Identities = 28/60 (46%), Positives = 41/60 (68%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA GL+E+ VM FGL+NAP+ FM+LMN+V +L + Sbjct: 1888 KIDLRSGYHQLKIRTGDIPKTAFSTCYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDK 2067 Score = 60.6 bits (126), Expect(3) = 1e-30 Identities = 20/50 (40%), Positives = 36/50 (72%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 L KKDGS MC D + + ++T++ ++P+PR+D + D L+ A++F+K+D Sbjct: 1747 LFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLNGAKVFSKID 1896 Score = 47.3 bits (97), Expect(3) = 1e-30 Identities = 22/65 (33%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDLIPG + + +M E + LK+++ EL +KG +R S SP P Sbjct: 1570 MPPDRDIEFIIDLIPGTASISKRPYQMPVNELEELKKQIRELQEKGFVRPSSSPWGAPVL 1749 Query: 2232 HAKER 2246 K++ Sbjct: 1750 FVKKK 1764 Score = 36.8 bits (74), Expect = 0.70 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N LA LS*S S RG G L+L V + S H+ PSFF Sbjct: 1898 RSILENTLAPLS*SKRSSIRGSGYLFLIVTSFSDR*STHILMLPSFF 1758
>LOC_Os12g19150:12012.t01763:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4311 Score = 67.5 bits (141), Expect(3) = 1e-30 Identities = 30/60 (50%), Positives = 41/60 (68%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE M FGL+NAP+ FM+LMN+V +FL + Sbjct: 2023 KIDLRSGYHQLRIREEDIPKTAFITRYGLFECTDMSFGLTNAPAFFMNLMNKVFMEFLDK 2202 Score = 54.2 bits (112), Expect(3) = 1e-30 Identities = 17/50 (34%), Positives = 33/50 (66%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ ++P+PR+D + D L A +F+K+D Sbjct: 1882 IFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATMFSKID 2031 Score = 51.5 bits (106), Expect(3) = 1e-30 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E K++V+E LQKG+IR S+SP P Sbjct: 1699 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEAKKQVDEQLQKGYIRPSMSPWGAP 1878 Score = 40.9 bits (83), Expect(3) = 2e-08 Identities = 20/46 (43%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP ++ HSNNP + AVF S I Sbjct: 2195 RNSINTLFIKFMKKAGALVSPKDISVHSNNPYRVMNAVFGISSSRI 2058 Score = 29.0 bits (57), Expect(3) = 2e-08 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1877 GAPQGDMLGRMYPFCNCSST 1818 Score = 27.2 bits (53), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G L+L V L+ S H+ SFF Sbjct: 2033 RSILENIVAPFN*SNRSSILGKGYLFLMVTSLSAR*STHILLVLSFF 1893 Score = 34.1 bits (68), Expect = 4.7 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H F+QP Sbjct: 2202 LV*KFHKHLVHQIHEEGRCISESERHICAFEQP 2104
>LOC_Os08g20770:12008.t01887:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4308 Score = 68.9 bits (144), Expect(3) = 1e-30 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1870 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 2049 Score = 53.3 bits (110), Expect(3) = 1e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1729 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATIFSKID 1878 Score = 51.0 bits (105), Expect(3) = 1e-30 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1552 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1725 Score = 44.1 bits (90), Expect(2) = 2e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 2027 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 1905 Score = 25.8 bits (50), Expect(2) = 2e-05 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = -2 / -2 Query: 2357 LAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +A LS*SN S G G L+L V S H+ SFF Sbjct: 1859 VAPLS*SNKSSILGSGYLFLIVTSFNAR*STHILWVWSFF 1740 Score = 34.5 bits (69), Expect(2) = 0.71 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + ++ C+ CG GH + CP Sbjct: 862 APRPVAAPTQQQPAKREQGSKPVVCFNCGDPGHYADKCP 978 Score = 26.3 bits (51), Expect(2) = 0.71 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +2 / +3 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 +V M + WT +C +L+ LDE Sbjct: 1953 IVRMYGYVFWTYQCPCFLHELDE 2021
>LOC_Os02g16960:12002.t01489:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 3966 Score = 68.9 bits (144), Expect(3) = 1e-30 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1414 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 1593 Score = 53.3 bits (110), Expect(3) = 1e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1273 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATIFSKID 1422 Score = 51.0 bits (105), Expect(3) = 1e-30 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 1096 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 1269 Score = 42.8 bits (87), Expect(2) = 2e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 1571 TLFIKFMKKAGALVSPKDITVHSNNPYRVVKAVLGISSSLI 1449 Score = 27.2 bits (53), Expect(2) = 2e-05 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = -2 / -2 Query: 2357 LAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +A LS*SN S G G L+L V L+ S H+ SFF Sbjct: 1403 VAPLS*SNKSSILGSGYLFLIVTSLSAR*STHIL*VWSFF 1284 Score = 34.1 bits (68), Expect(2) = 0.045 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + ++ C+ CG GH + CP Sbjct: 406 APRPVATPSQQQPAKREQGSKPGVCFNCGDPGHYADKCP 522 Score = 30.9 bits (61), Expect(2) = 0.045 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 / +3 Query: 2438 VV*MGSHAIWTLKCTKYLYALDE 2506 VV*M S+ WT +C +L+ LDE Sbjct: 1497 VV*MYSYVFWTYQCPCFLHELDE 1565
>LOC_Os05g13610:12005.t01139:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3717 Score = 69.8 bits (146), Expect(3) = 1e-30 Identities = 31/60 (51%), Positives = 41/60 (68%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RIR D KTA + GLFE VM FGL+NAP FM+LMN+V +FL + Sbjct: 1165 KIDLQSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPDFFMNLMNKVFMEFLDK 1344 Score = 52.8 bits (109), Expect(3) = 1e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + ++T++ +P+PR+D + D L A +F+K+D Sbjct: 1024 IFVEKKDKTKRMCVDYRTLNEVTIKNEYPLPRIDDLFDQLKGATVFSKID 1173 Score = 50.6 bits (104), Expect(3) = 1e-30 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 / +1 Query: 2046 TRLSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 T + P + I++ IDL+PG + + RM E +K++V+E LQKG+IR S SP P Sbjct: 841 TTMPPKRDIEFRIDLVPGTAPIHKRPYRMGANELAEVKKQVDEQLQKGYIRLSTSPWGAP 1020 Score = 42.3 bits (86), Expect(3) = 1e-08 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -3 / -2 Query: 2527 KNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 +N T FIK +K GA SP +T HSNNP + AVF S I Sbjct: 1337 RNSINTLFIKFMKKSGALVSPKDITVHSNNPYRVMNAVFGISSSRI 1200 Score = 29.5 bits (58), Expect(3) = 1e-08 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G G +L RM PFCN SST Sbjct: 1019 GAPQGDVLRRMYPFCNCSST 960 Score = 25.8 bits (50), Expect(3) = 1e-08 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S N +A +*SN S G G +L V L+ S H+ SFF Sbjct: 1175 RSILENTVAPFN*SNRSSILGKGYSFLMVTSLSVR*STHILLVLSFF 1035 Score = 38.6 bits (78), Expect(2) = 0.14 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = -2 / -1 Query: 2534 LG*ELSKDLIHQVHKGTWCI*ESKWHDYPFKQP 2436 L *+ K L+HQ+H+ CI ES+ H+ FKQP Sbjct: 1344 LV*KFHKHLVHQIHEEVRCISESERHNCAFKQP 1246 Score = 24.4 bits (47), Expect(2) = 0.14 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -2 / -1 Query: 2198 SNVPLLQQFLHSLLQYIMLFWAHSTVWKIRETCSRNQVNTILN 2070 ++V LL F+ LL + L +HS + SR QVN L+ Sbjct: 993 ADVSLL*LFIDLLLDFRQLVGSHSVRPLVDRCSSRYQVNPELD 865
>LOC_Os04g18910:12004.t01632:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3215 Score = 68.4 bits (143), Expect(3) = 1e-30 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 679 KIDLQSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 858 Score = 52.8 bits (109), Expect(3) = 1e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 538 IFAEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 687 Score = 51.9 bits (107), Expect(3) = 1e-30 Identities = 24/65 (36%), Positives = 41/65 (63%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 361 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPS*SPWGAPVI 540 Query: 2232 HAKER 2246 A+++ Sbjct: 541 FAEKK 555 Score = 43.7 bits (89), Expect(3) = 8e-10 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -1 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 836 TLFIKFMKNAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 714 Score = 29.5 bits (58), Expect(3) = 8e-10 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -3 / -1 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSILY*IPFIG 2057 G HG L M PF + SST + S + PG KSIL I +G Sbjct: 533 GAPHGD*LGLMYPF*SKSSTCLLTSANSLAAILYGRLWIGVVPGTKSILNSISLLG 366 Score = 28.6 bits (56), Expect(3) = 8e-10 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V L+ S H+ SFF Sbjct: 689 RSILEKTVAPLS*SNKSSILGRGYLFLIVTSLSAR*STHILWVWSFF 549
>LOC_Os12g38710:12012.t03551:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2838 Score = 72.1 bits (151), Expect(3) = 1e-30 Identities = 29/60 (48%), Positives = 43/60 (71%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ++IR D KTA + GL+E+ VM FGL+NAP+ FM+LMN++ +FL Q Sbjct: 319 KIDLRSGYHQLKIRSEDIPKTAFSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEFLDQ 498 Score = 56.5 bits (117), Expect(3) = 1e-30 Identities = 20/50 (40%), Positives = 34/50 (68%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 LL KKDG M D + + ++T++ ++P+PR+D + D L AR+F+K+D Sbjct: 178 LLVKKKDGYERMVIDYRALNEVTIKNKYPLPRIDDLFDQLKGARVFSKID 327 Score = 44.6 bits (91), Expect(3) = 1e-30 Identities = 21/65 (32%), Positives = 37/65 (56%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVPPA 2231 + P + I+++I+L PG + RM+ E +K+++EEL KG++R S SP P Sbjct: 1 MPPDREIEFAIELAPGTAPITKRPYRMAANELAEVKRQIEELESKGYVRPSSSPWGAPVL 180 Query: 2232 HAKER 2246 K++ Sbjct: 181 LVKKK 195 Score = 39.1 bits (79), Expect(2) = 7e-07 Identities = 20/48 (41%), Positives = 26/48 (54%) Frame = -3 / -2 Query: 2533 WDKNCRRT*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 W +N + FIK +K GA SP +T +S P + KAVF S LI Sbjct: 497 WSRNSMKILFIKFMKNAGALVSPKDITVNSYRP*RVEKAVFGISSDLI 354 Score = 35.9 bits (72), Expect(2) = 7e-07 Identities = 21/48 (43%), Positives = 25/48 (52%) Frame = -2 / -2 Query: 2381 MKSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +KS LA LS*SN S RG G L+ V L S+ + PSFF Sbjct: 332 LKSILEKTLAPLS*SNKSSIRGNGYLFFIVTSFRAL*SITILS*PSFF 189
>LOC_Os12g33450:12012.t03034:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6616 Score = 68.9 bits (144), Expect(4) = 1e-30 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 4064 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 4243 Score = 52.8 bits (109), Expect(4) = 1e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 3923 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 4072 Score = 51.0 bits (105), Expect(4) = 1e-30 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 3746 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 3919 Score = 36.8 bits (74), Expect(4) = 1e-30 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +2 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + N+ C+ CG GH + CP Sbjct: 3056 APRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP 3172 Score = 44.1 bits (90), Expect(3) = 2e-08 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 4221 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 4099 Score = 26.7 bits (52), Expect(3) = 2e-08 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSST 2165 G HG L M PFC+ SST Sbjct: 3918 GAPHGDELGLMYPFCSKSST 3859 Score = 26.3 bits (51), Expect(3) = 2e-08 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 4074 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHIL*VWSFF 3934 Score = 35.0 bits (70), Expect = 2.5 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 / -1 Query: 2516 KDLIHQVHKGTWCI*ESKWHDYPFKQPFLSLQGGFPFIPGSDTDLM 2379 K LIHQVH+ + I +SK H+ F+QP S + +I D+ LM Sbjct: 4225 KHLIHQVHEESRGIGKSKRHNSTFEQPIPSGKSCLRYILLFDSQLM 4088
>LOC_Os07g16240:12007.t01485:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3732 Score = 68.0 bits (142), Expect(4) = 2e-30 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +1 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 1252 KIDLRSGYHQLRIKEEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 1431 Score = 52.8 bits (109), Expect(4) = 2e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +1 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 1111 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 1260 Score = 49.6 bits (102), Expect(4) = 2e-30 Identities = 23/58 (39%), Positives = 36/58 (62%) Frame = +3 / +1 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 934 MPPKTDIEFRIDLVPGTTPIHKRPYRMAANELAQVKRQVDDLLQKGYIRPSSSPWGAP 1107 Score = 36.3 bits (73), Expect(4) = 2e-30 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 / +1 Query: 1195 APPKVKRPIPKQTSGKGKANEGPKCYKCGKEGHISSGCP 1311 AP V P +Q + + + ++ C+ CG GH S CP Sbjct: 244 APRPVATPTQQQPAKREQGSKPGVCFNCGDSGHYSDKCP 360 Score = 44.6 bits (91), Expect(3) = 8e-10 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 1409 TLFIKFMKKAGALVSPKDITVHSNNPYLVIKAVLGISSSLI 1287 Score = 29.9 bits (59), Expect(3) = 8e-10 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -3 / -2 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSILY*IPFIG 2057 G HG L M PF + SST + S + PG KSIL I +G Sbjct: 1106 GAPHGDELGLMYPF*SKSSTCLLTCANSLAAILYGRLWIGVVPGTKSILNSISVLG 939 Score = 27.2 bits (53), Expect(3) = 8e-10 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 / -2 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V + S H+ SFF Sbjct: 1262 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFSAR*STHILWV*SFF 1122
>LOC_Os08g12020:12008.t01082:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 17259 Score = 68.9 bits (144), Expect(3) = 2e-30 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 9146 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 9325 Score = 52.8 bits (109), Expect(3) = 2e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 9005 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 9154 Score = 51.0 bits (105), Expect(3) = 2e-30 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 8828 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 9001 Score = 44.1 bits (90), Expect(3) = 1e-09 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -1 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 9303 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 9181 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -3 / -1 Query: 2224 GTGHGLILSRMCPFCNNSSTLCFNISCSFXXXXXXXXXXXLAPGIKSILY*IPFIG 2057 G HG L M PF + SST + S + PG KSIL I +G Sbjct: 9000 GAPHGDELGLMYPF*SKSSTCLLTSANSLAAIRYGLLWIGVVPGTKSILNSISLLG 8833 Score = 26.7 bits (52), Expect(3) = 1e-09 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V S H+ SFF Sbjct: 9156 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFNAR*STHILWV*SFF 9016
>LOC_Os03g41960:12003.t03604:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 15297 Score = 68.9 bits (144), Expect(3) = 2e-30 Identities = 29/60 (48%), Positives = 42/60 (70%) Frame = +3 / +2 Query: 2355 KIVHKARFHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFLSQ 2534 KI ++ +HQ+RI+ D KTA + GLFE VM FGL+NAP+ FM+LMN+V ++L + Sbjct: 10298 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 10477 Score = 52.8 bits (109), Expect(3) = 2e-30 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +1 / +2 Query: 2227 LLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 + KKD + MC D + + +T++ ++P+PR+D + D L A +F+K+D Sbjct: 10157 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKID 10306 Score = 51.0 bits (105), Expect(3) = 2e-30 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +3 / +2 Query: 2052 LSPIKGIQYSIDLIPGASLPNLPHSRMSPKEHDILKQRVEELLQKGHIRESISPCPVP 2225 + P + I++ IDL+PG + + RM+ E +K++V++LLQKG+IR S SP P Sbjct: 9980 MPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAP 10153 Score = 44.6 bits (91), Expect(2) = 7e-10 Identities = 21/51 (41%), Positives = 27/51 (52%) Frame = +3 / +3 Query: 2376 FHQIRIRPRDEWKTALKRKEGLFEWVVMPFGLSNAPSTFMHLMNQVLRQFL 2528 +HQI + DE KT L G+F +V MPFGL A +TF + L L Sbjct: 2388 YHQISMAKEDEEKTTLITPFGVFCYVKMPFGLITAGNTFQRTVQGALNDLL 2540 Score = 40.5 bits (82), Expect(2) = 7e-10 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +1 / +3 Query: 2224 PLLTPKKDGS*HMCTDIKVVKKITVRYRFPIPRLDGMLD*LSAARLFTKLD 2376 P++ K +G MC D + K + FP+PR+D ++D + L + LD Sbjct: 2223 PVMVRKANGKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTAGCELLSFLD 2375 Score = 44.1 bits (90), Expect(2) = 1e-05 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -3 / -1 Query: 2512 T*FIKCIKVLGAFESPNGMTTHSNNPSFLFKAVFHSSRGLI 2390 T FIK +K GA SP +T HSNNP + KAV S LI Sbjct: 10455 TLFIKFMKKAGALVSPKDITVHSNNPYLVVKAVLGISSSLI 10333 Score = 26.3 bits (51), Expect(2) = 1e-05 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 / -1 Query: 2378 KSSFVNNLAALS*SNIPSRRGIGNLYLTVIFLTTLMSVHMCQDPSFF 2238 +S +A LS*SN S G G L+L V S H+ SFF Sbjct: 10308 RSILEKTVAPLS*SNKSSILGSGYLFLIVTSFRAR*STHILWV*SFF 10168 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 1,103,356,776 Number of extensions: 19039245 Number of successful extensions: 90118 Number of sequences better than 10.0: 3245 Length of query: 849 Length of database: 55,613,886 Length adjustment: 52 Effective length of query: 797 Effective length of database: 52,687,430 Effective search space: 41991881710 Effective search space used: 41991881710 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
