>P11939:FOS_CHICK Proto-oncogene protein c-fos - Gallus gallus (Chicken)|
          Length = 367
 Score = 32.3 bits (72), Expect = 1.3
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
 Frame = -2

Query: 253 HPRHPPRPSPIAALCPSASRRPALHRAATPRGWGLGAR-------PPQVRERRLKRHR 101
           HP   P P+P     P+A  RPA+ +A   RG  +G R       P +  +RR++R R
Sbjct: 93  HPYGVPAPAP-----PAAYSRPAVLKAPGGRGQSIGRRGKVEQLSPEEEEKRRIRRER 145

>P23050:FOS_AVINK p55-v-Fos-transforming protein - Avian retrovirus NK24|
          Length = 322

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
 Frame = -2

Query: 253 HPRHPPRPSPIAALCPSASRRPALHRAATPRGWGLGAR-------PPQVRERRLKRHR 101
           HP   P P+P     P+A  RPA+ +A   RG  +G R       P +  +RR++R R
Sbjct: 48  HPYGVPAPAP-----PAAYSRPAVLKAPGGRGQSIGRRGKVEQLSPEEEEKRRIRRER 100

>Q82K53:IF2_STRAW Translation initiation factor IF-2 - Streptomyces avermitilis|
          Length = 1046

 Score = 27.7 bits (60), Expect(2) = 1.5
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 241 PPRPSPIAALCPSASRRPALHRAA 170
           PP P P AA  P+A+ RPA   AA
Sbjct: 84  PPAPKPAAAERPAAAERPAAAPAA 107



 Score = 23.1 bits (48), Expect(2) = 1.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 146 SPAAPGS*KASQTAPRRAPCS 84
           +PAAPG     + APR AP +
Sbjct: 104 APAAPGPRPGPKPAPRPAPAA 124

>O43379:WDR62_HUMAN WD repeat protein 62 - Homo sapiens (Human)|
          Length = 1518

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
 Frame = -3

Query: 231  PAPSP--PYALRLHG--VQPCIEQPRRAGGDLEPGRPRFVK---GVSNGTAS 97
            PAPSP    ALRLHG   +P +  P   G    P  P+  +   G+  GTAS
Sbjct: 1322 PAPSPVEESALRLHGSAFRPSLPAPESPGLPAHPSNPQLPEARPGIPGGTAS 1373

>Q9UZ57:IORA_PYRAB Indolepyruvate oxidoreductase subunit iorA - Pyrococcus abyssi|
          Length = 648

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 8/44 (18%)
 Frame = -2

Query: 241 PPRPSPIAALCPSASRRPALHRAATPRG--------WGLGARPP 134
           PPRP  +   CP  +   AL +AATPR         + LG  PP
Sbjct: 378 PPRPPSLCPACPHRNTFFALRKAATPRAIYPSDIGCYTLGVLPP 421

>P26377:STP2_BOVIN Nuclear transition protein 2 - Bos taurus (Bovine)|
          Length = 132

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = -2

Query: 262 CACHPRHPPRPSPIAALCPSASRRPALHRAATPR-GWGLGARPPQVRERRLKRHRVGRHA 86
           C+C      R    +    S+SRRP  HR+ T R G   G  PP      L+RHR   H+
Sbjct: 29  CSCSQHCQSRSRSRSCRSRSSSRRPRSHRSPTGRQGQSPGPSPP------LRRHRHTMHS 82

>P98158:LRP2_RAT Low-density lipoprotein receptor-related protein 2 precursor - Rattus|
            norvegicus (Rat)
          Length = 4660

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
 Frame = -2

Query: 334  LHARRWSXXXXXXXXXXXXXPVSLCACHP-RHPPRPSPIAA-----LCPSASRRPALHRA 173
            + A +W              P+ + A HP R PP  +P A+     LC  +++ P  +  
Sbjct: 1667 MQANKWHGGNQSVVMYSVHQPLGITAIHPSRQPPSRNPCASASCSHLCLLSAQAPRHYSC 1726

Query: 172  ATPRGWGL 149
            A P GW L
Sbjct: 1727 ACPSGWNL 1734

>P52980:GLGB_STRAU 1,4-alpha-glucan-branching enzyme - Streptomyces aureofaciens|
          Length = 764

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = -2

Query: 247 RHPPRPSPIAALCPSASRRPALHRAATPRGWGLGARPPQVRERRLKRHRVGRHAPSKILN 68
           R    P P A   P  +R P   RAA P   G+   P    E R +      H P  +L 
Sbjct: 12  RDKAAPEPAAPAAPKGARAPRARRAAPPH--GVRPAPALAAEERARLLEGRHHDPHAVLG 69

Query: 67  A 65
           A
Sbjct: 70  A 70

>Q9H8S5:CNTD2_HUMAN Cyclin N-terminal domain-containing protein 2 - Homo sapiens|
           (Human)
          Length = 155

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 20/47 (42%), Positives = 24/47 (51%)
 Frame = -2

Query: 247 RHPPRPSPIAALCPSASRRPALHRAATPRGWGLGARPPQVRERRLKR 107
           R  PRPSP+ +L  S    P+   AA P G+  G   P V  RRL R
Sbjct: 20  RWAPRPSPLQSLAASLDAEPS--SAAVPDGFPAG---PTVSPRRLAR 61

>P0C2N6:SUV42_RAT Histone-lysine N-methyltransferase SUV420H2 - Rattus norvegicus|
           (Rat)
          Length = 470

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 24/64 (37%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
 Frame = -2

Query: 271 VSLCACHPRHPPRPSPIAALC-PSASRRPALHRAATPRGWGLGARPPQVRERRLKRHRVG 95
           +SL AC    P RP P  A C PS     + H    P  W      PQ R R  KR R  
Sbjct: 280 LSLRACSHLSPLRPDPFCAACQPSCLLPVSPHMDYLPL-WLQWVPQPQPRVRPRKRRRRR 338

Query: 94  RHAP 83
           R  P
Sbjct: 339 RRRP 342

>O58495:IORA_PYRHO Indolepyruvate oxidoreductase subunit iorA - Pyrococcus horikoshii|
          Length = 648

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 8/44 (18%)
 Frame = -2

Query: 241 PPRPSPIAALCPSASRRPALHRAATPRG--------WGLGARPP 134
           PPRP  +   CP  +   A+ +AATPR         + LG  PP
Sbjct: 378 PPRPPSLCPACPHRNTFFAIRKAATPRAIFPSDIGCYTLGVLPP 421

>P08314:ATI2_HHV1F Alpha trans-inducing factor 77 kDa protein - Human herpesvirus 1|
           (strain F) (HHV-1) (Human herpes simplex virus 1)
          Length = 715

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -2

Query: 238 PRPSPIAALCPSASRRPALHRAATPRGWG 152
           P   P AA CP   RR +L     PRGWG
Sbjct: 536 PDRRPPAATCPLLVRRASLGSLDRPRGWG 564

>Q9Y572:RIPK3_HUMAN Receptor-interacting serine/threonine-protein kinase 3 - Homo|
           sapiens (Human)
          Length = 518

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
 Frame = -2

Query: 232 PSPIAALCPSASRRPALHRAATPRGWGLG------ARPPQVRERRLKRHRV 98
           PS +   CPS ++R        P+ W  G      A+PPQ  E    R+++
Sbjct: 358 PSSVPKKCPSLTKRSRAQEEQVPQAWTAGTSSDSMAQPPQTPETSTFRNQM 408


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 85,298,021
Number of extensions: 1630333
Number of successful extensions: 6105
Number of sequences better than 10.0: 13
Number of HSP's gapped: 6084
Number of HSP's successfully gapped: 14
Length of query: 197
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 90
Effective length of database: 71,336,874
Effective search space: 6420318660
Effective search space used: 6420318660
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)