Clone Name | FLbaf87i15 |
---|---|
Clone Library Name | barley_pub |
>P80883:PETM_SPIOL Cytochrome b6-f complex subunit 7 - Spinacia oleracea (Spinach)| Length = 36 Score = 49.3 bits (116), Expect = 1e-05 Identities = 24/29 (82%), Positives = 26/29 (89%) Frame = +2 Query: 341 NAAGEIFQIAVVMNALTLVGVAVGFVLLR 427 NAA EIF+IA VMN LTLVGVA+GFVLLR Sbjct: 1 NAAAEIFRIAAVMNGLTLVGVAIGFVLLR 29
>Q42496:PETM_CHLRE Cytochrome b6-f complex subunit 7, chloroplast precursor -| Chlamydomonas reinhardtii Length = 99 Score = 33.5 bits (75), Expect = 0.73 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 10/56 (17%) Frame = +2 Query: 290 SLSPAGKRRGGTFGAQCNAAGEIFQIA----------VVMNALTLVGVAVGFVLLR 427 SL AG++ + G A E+ IA + M +TLVG+A+GFVLLR Sbjct: 34 SLRTAGQKAAPSRGVATKAVNELAMIAGEAEFIAGTALTMVGMTLVGLAIGFVLLR 89
>Q1XDL1:PETM_PORYE Cytochrome b6-f complex subunit 7 - Porphyra yezoensis| Length = 32 Score = 32.3 bits (72), Expect = 1.6 Identities = 14/26 (53%), Positives = 21/26 (80%) Frame = +2 Query: 350 GEIFQIAVVMNALTLVGVAVGFVLLR 427 GEI + AV+ + L LVG+A+GF+LL+ Sbjct: 3 GEIVESAVLSSVLVLVGLAIGFLLLK 28
>P48366:PETM_CYAPA Cytochrome b6-f complex subunit 7 - Cyanophora paradoxa| Length = 33 Score = 31.2 bits (69), Expect = 3.6 Identities = 13/25 (52%), Positives = 20/25 (80%) Frame = +2 Query: 353 EIFQIAVVMNALTLVGVAVGFVLLR 427 +IF AV+ LTL+G+++GFVLL+ Sbjct: 4 QIFNTAVICFTLTLIGLSLGFVLLK 28
>Q7NLN8:PETM_GLOVI Cytochrome b6-f complex subunit 7 - Gloeobacter violaceus| Length = 36 Score = 30.8 bits (68), Expect = 4.7 Identities = 14/26 (53%), Positives = 21/26 (80%) Frame = +2 Query: 350 GEIFQIAVVMNALTLVGVAVGFVLLR 427 GEIF +A ++ LTLVG+A+GF +L+ Sbjct: 3 GEIFFVAGLVFVLTLVGMAIGFGVLK 28
>Q4G3B3:PETM_EMIHU Cytochrome b6-f complex subunit 7 - Emiliania huxleyi| Length = 32 Score = 30.8 bits (68), Expect = 4.7 Identities = 16/27 (59%), Positives = 20/27 (74%) Frame = +2 Query: 347 AGEIFQIAVVMNALTLVGVAVGFVLLR 427 A EIF +A VM AL L G++VGF LL+ Sbjct: 2 AKEIFTVAGVMWALVLTGLSVGFGLLK 28
>P51275:PETM_PORPU Cytochrome b6-f complex subunit 7 - Porphyra purpurea| Length = 32 Score = 30.0 bits (66), Expect = 8.0 Identities = 13/25 (52%), Positives = 20/25 (80%) Frame = +2 Query: 353 EIFQIAVVMNALTLVGVAVGFVLLR 427 EI + A++ + L LVG+AVGF+LL+ Sbjct: 4 EIVESAILSSVLVLVGLAVGFLLLK 28 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 78,204,977 Number of extensions: 1414777 Number of successful extensions: 3388 Number of sequences better than 10.0: 7 Number of HSP's gapped: 3387 Number of HSP's successfully gapped: 7 Length of query: 221 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 112 Effective length of database: 70,788,284 Effective search space: 7928287808 Effective search space used: 7928287808 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)