Clone Name | FLbaf87i07 |
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Clone Library Name | barley_pub |
>emb|CT837966.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA215O01, full insert sequence Length = 838 Score = 496 bits (250), Expect = e-137 Identities = 404/454 (88%), Gaps = 1/454 (0%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 190 aaccctaaggcctacccgctggcggacgcgcagctgacgatgaccatcctcgacctcgtc 249 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 ||||||||| |||| |||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 250 cagcaggcctccaattacaagcagctcaagaagggggccaacgaagcgacgaagaccctg 309 Query: 246 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctc 305 |||||||| ||||| ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 310 aacaggggtatatcagagttcgtggtgatggcggccgacacggagccgctcgagatcctt 369 Query: 306 ctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaag 365 ||||||||||| ||||||||||||| ||||| || || ||||| ||||||||||| ||| Sbjct: 370 ctccacctccccctgctcgcggaggataagaacgttccatatgtttttgtcccttcgaag 429 Query: 366 caagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagc 425 ||||||||||| || || ||||| || ||||| || |||||||||||||||||||||||| Sbjct: 430 caagcccttggccgcgcatgtggcgttactagacctgtcattgcttgttcagtgaccagc 489 Query: 426 aatgagggtagccaactgaagcagccgatccagagtctcaaggatgccatcgagaagctt 485 || ||||| || || |||||| ||||| |||| |||||||||||| ||||||||||| Sbjct: 490 aacgagggcagtcagctgaagacaccgatacagaatctcaaggatgctatcgagaagctc 549 Query: 486 ctcatatgatttatcaagacctttcagtgtgatgggcctc-gtgtgacacagtttttcag 544 ||||| ||||||| |||||||||||||||||||||||||| | | ||||||||||||||| Sbjct: 550 ctcatttgatttaccaagacctttcagtgtgatgggcctcagagcgacacagtttttcag 609 Query: 545 gggcttggactggtgatggtgtcttgtctgctag 578 |||||||||||||||||||||||| | |||||| Sbjct: 610 aggcttggactggtgatggtgtcttatttgctag 643 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccgcggcggccgcctcctcctc 74 |||||||||||||||||||||| Sbjct: 95 ccgcggcggccgcctcctcctc 116
>dbj|AK243227.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100044F18, full insert sequence Length = 2769 Score = 496 bits (250), Expect = e-137 Identities = 404/454 (88%), Gaps = 1/454 (0%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 2122 aaccctaaggcctacccgctggcggacgcgcagctgacgatgaccatcctcgacctcgtc 2181 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 ||||||||| |||| |||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 2182 cagcaggcctccaattacaagcagctcaagaagggggccaacgaagcgacgaagaccctg 2241 Query: 246 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctc 305 |||||||| ||||| ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2242 aacaggggtatatcagagttcgtggtgatggcggccgacacggagccgctcgagatcctt 2301 Query: 306 ctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaag 365 ||||||||||| ||||||||||||| ||||| || || ||||| ||||||||||| ||| Sbjct: 2302 ctccacctccccctgctcgcggaggataagaacgttccatatgtttttgtcccttcgaag 2361 Query: 366 caagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagc 425 ||||||||||| || || ||||| || ||||| || |||||||||||||||||||||||| Sbjct: 2362 caagcccttggccgcgcatgtggcgttactagacctgtcattgcttgttcagtgaccagc 2421 Query: 426 aatgagggtagccaactgaagcagccgatccagagtctcaaggatgccatcgagaagctt 485 || ||||| || || |||||| ||||| |||| |||||||||||| ||||||||||| Sbjct: 2422 aacgagggcagtcagctgaagacaccgatacagaatctcaaggatgctatcgagaagctc 2481 Query: 486 ctcatatgatttatcaagacctttcagtgtgatgggcctc-gtgtgacacagtttttcag 544 ||||| ||||||| |||||||||||||||||||||||||| | | ||||||||||||||| Sbjct: 2482 ctcatttgatttaccaagacctttcagtgtgatgggcctcagagcgacacagtttttcag 2541 Query: 545 gggcttggactggtgatggtgtcttgtctgctag 578 |||||||||||||||||||||||| | |||||| Sbjct: 2542 aggcttggactggtgatggtgtcttatttgctag 2575 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccgcggcggccgcctcctcctc 74 |||||||||||||||||||||| Sbjct: 2033 ccgcggcggccgcctcctcctc 2054
>ref|NM_001056049.1| Oryza sativa (japonica cultivar-group) Os03g0241200 (Os03g0241200) mRNA, complete cds Length = 387 Score = 391 bits (197), Expect = e-105 Identities = 323/365 (88%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 19 aaccctaaggcctacccgctggcggacgcgcagctgacgatgaccatcctcgacctcgtc 78 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 ||||||||| |||| |||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 79 cagcaggcctccaattacaagcagctcaagaagggggccaacgaagcgacgaagaccctg 138 Query: 246 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctc 305 |||||||| ||||| ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 139 aacaggggtatatcagagttcgtggtgatggcggccgacacggagccgctcgagatcctt 198 Query: 306 ctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaag 365 ||||||||||| ||||||||||||| ||||| || || ||||| ||||||||||| ||| Sbjct: 199 ctccacctccccctgctcgcggaggataagaacgttccatatgtttttgtcccttcgaag 258 Query: 366 caagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagc 425 ||||||||||| || || ||||| || ||||| || |||||||||||||||||||||||| Sbjct: 259 caagcccttggccgcgcatgtggcgttactagacctgtcattgcttgttcagtgaccagc 318 Query: 426 aatgagggtagccaactgaagcagccgatccagagtctcaaggatgccatcgagaagctt 485 || ||||| || || |||||| ||||| |||| |||||||||||| ||||||||||| Sbjct: 319 aacgagggcagtcagctgaagacaccgatacagaatctcaaggatgctatcgagaagctc 378 Query: 486 ctcat 490 ||||| Sbjct: 379 ctcat 383
>gb|BT017257.1| Zea mays clone EL01N0308D08.c mRNA sequence Length = 718 Score = 381 bits (192), Expect = e-102 Identities = 390/452 (86%), Gaps = 3/452 (0%) Strand = Plus / Plus Query: 121 cggtcaaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgaca 180 |||| ||||| ||||| ||||||||||| || |||||||||||||| |||||||| | Sbjct: 43 cggtgaacccgaaggcgtacccgctggctgatgcgcagctgacgatgggtatcctcgata 102 Query: 181 tcgtccagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaaga 240 || |||||||||||||||||||||||||||||||||||||||| ||||||||||| || | Sbjct: 103 tcatccagcaggccgccaactacaagcagctcaagaagggagcgaacgaagcgacgaaaa 162 Query: 241 ctctcaacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaa 300 | || || ||||| |||||||||||||| |||||||| || ||||||||||| ||||| | Sbjct: 163 ccctgaatagggggatatcggagttcgttgtgatggcggcggacacggagcctctcgaga 222 Query: 301 tcctcctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtccctt 360 |||| ||||||||||| ||| | || ||||| ||||| || || ||||| ||||| || | Sbjct: 223 tcctgctccacctccccttgttagccgaggataagaacgtcccatatgtatttgttccat 282 Query: 361 caaagcaagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtga 420 | || ||||| ||||| ||||||||||| ||||| || || ||||||||||| ||||||| Sbjct: 283 cgaaacaagctcttggccgtgcttgtggtgtgacaagacccgtcattgcttgctcagtga 342 Query: 421 ccagcaatgagggtagccaactgaagcagccgatccagagtctcaaggatgccatcgaga 480 ||||||||||||||||||| ||||| || | ||| ||| |||||||||| | || |||| Sbjct: 343 ccagcaatgagggtagccagctgaaacaacagatacagggtctcaaggactcgattgaga 402 Query: 481 agcttctcatatgatttatc-aagacctttcagtgtgatgggcctcgtgtgacacagttt 539 |||||||||| ||||||| | |||| ||||||||||||||||||||| | |||||| ||| Sbjct: 403 agcttctcatctgatttacctaagatctttcagtgtgatgggcctcg-gcgacaca-ttt 460 Query: 540 ttcaggggcttggactggtgatggtgtcttgt 571 ||||| |||||||||||||||||||||||||| Sbjct: 461 ttcagaggcttggactggtgatggtgtcttgt 492
>gb|DQ244176.1| Zea mays clone 2823 mRNA sequence Length = 777 Score = 373 bits (188), Expect = e-100 Identities = 389/452 (86%), Gaps = 3/452 (0%) Strand = Plus / Plus Query: 121 cggtcaaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgaca 180 |||| ||||| ||||| ||||||||||| || |||||||||||||| |||||||| | Sbjct: 132 cggtgaacccgaaggcgtacccgctggctgatgcgcagctgacgatgggtatcctcgata 191 Query: 181 tcgtccagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaaga 240 || |||||||||||||||||||||||||||||||||||||||| ||||||||||| || | Sbjct: 192 tcatccagcaggccgccaactacaagcagctcaagaagggagcgaacgaagcgacgaaaa 251 Query: 241 ctctcaacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaa 300 | || || ||||| |||||||||||||| |||||||| || ||||||||||| ||||| | Sbjct: 252 ccctgaatagggggatatcggagttcgttgtgatggcggcggacacggagcctctcgaga 311 Query: 301 tcctcctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtccctt 360 |||| ||||||||||| ||| | || ||||| ||||| || || ||||| ||||| || | Sbjct: 312 tcctgctccacctccccttgttagccgaggataagaacgtcccatatgtatttgttccat 371 Query: 361 caaagcaagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtga 420 | || ||||| |||| ||||||||||| ||||| || || ||||||||||| ||||||| Sbjct: 372 cgaaacaagcttttggccgtgcttgtggtgtgacaagacccgtcattgcttgctcagtga 431 Query: 421 ccagcaatgagggtagccaactgaagcagccgatccagagtctcaaggatgccatcgaga 480 ||||||||||||||||||| ||||| || | ||| ||| |||||||||| | || |||| Sbjct: 432 ccagcaatgagggtagccagctgaaacaacagatacagggtctcaaggactcgattgaga 491 Query: 481 agcttctcatatgatttatc-aagacctttcagtgtgatgggcctcgtgtgacacagttt 539 |||||||||| ||||||| | |||| ||||||||||||||||||||| | |||||| ||| Sbjct: 492 agcttctcatctgatttacctaagatctttcagtgtgatgggcctcg-gcgacaca-ttt 549 Query: 540 ttcaggggcttggactggtgatggtgtcttgt 571 ||||| |||||||||||||||||||||||||| Sbjct: 550 ttcagaggcttggactggtgatggtgtcttgt 581
>gb|DQ244324.1| Zea mays clone 4866 mRNA sequence Length = 771 Score = 331 bits (167), Expect = 2e-87 Identities = 380/447 (85%), Gaps = 3/447 (0%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 ||||| ||||| ||||||||||| || |||||||||||||| |||||||| ||| || Sbjct: 166 aacccgaaggcatacccgctggctgatgcgcagctgacgatgggtatcctcgatatcatc 225 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||||||||||||||||| ||||| ||||||||||| || |||||||| ||||| || Sbjct: 226 cagcaggccgccaactacaaacagcttaagaagggagcgaatgaagcgacgaagaccctg 285 Query: 246 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctc 305 || ||||| ||||||||||| || |||||||| || ||||| ||||| ||||| ||||| Sbjct: 286 aataggggcatatcggagtttgtagtgatggcggcggacacagagcctctcgagatcctg 345 Query: 306 ctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaag 365 ||||||||||| ||| | || ||||| ||||| ||||| ||||| ||||| || || ||| Sbjct: 346 ctccacctccccttgttagctgaggataagaacgtgccatatgtgtttgttccatcgaag 405 Query: 366 caagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagc 425 ||||| ||||| ||||||||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 406 caagctcttggccgtgcttgtggtgtgacaagaccggttattgcttgctcagtgaccagt 465 Query: 426 aatgagggtagccaactgaagcagccgatccagagtctcaaggatgccatcgagaagctt 485 |||||||||||||| ||||| | | ||| ||| |||||||||| |||| ||||||||| Sbjct: 466 aatgagggtagccagctgaaactacagatacagggtctcaaggactccattgagaagctt 525 Query: 486 ctcatatgatttatc-aagacctttcagtgtgatgggcctcgtgtgacacagtttttcag 544 ||||| |||| | | ||||||||||||||||||||||||| | ||||| |||||||| Sbjct: 526 ctcatctgatctgccgaagacctttcagtgtgatgggcctcat-cgacac-ttttttcag 583 Query: 545 gggcttggactggtgatggtgtcttgt 571 |||||||||||||||||||||||||| Sbjct: 584 aggcttggactggtgatggtgtcttgt 610
>gb|BT018105.1| Zea mays clone EL01N0553D01.c mRNA sequence Length = 791 Score = 331 bits (167), Expect = 2e-87 Identities = 380/447 (85%), Gaps = 3/447 (0%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 ||||| ||||| ||||||||||| || |||||||||||||| |||||||| ||| || Sbjct: 167 aacccgaaggcatacccgctggctgatgcgcagctgacgatgggtatcctcgatatcatc 226 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||||||||||||||||| ||||| ||||||||||| || |||||||| ||||| || Sbjct: 227 cagcaggccgccaactacaaacagcttaagaagggagcgaatgaagcgacgaagaccctg 286 Query: 246 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctc 305 || ||||| ||||||||||| || |||||||| || ||||| ||||| ||||| ||||| Sbjct: 287 aataggggcatatcggagtttgtagtgatggcggcggacacagagcctctcgagatcctg 346 Query: 306 ctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaag 365 ||||||||||| ||| | || ||||| ||||| ||||| ||||| ||||| || || ||| Sbjct: 347 ctccacctccccttgttagctgaggataagaacgtgccatatgtgtttgttccatcgaag 406 Query: 366 caagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagc 425 ||||| ||||| ||||||||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 407 caagctcttggccgtgcttgtggtgtgacaagaccggttattgcttgctcagtgaccagt 466 Query: 426 aatgagggtagccaactgaagcagccgatccagagtctcaaggatgccatcgagaagctt 485 |||||||||||||| ||||| | | ||| ||| |||||||||| |||| ||||||||| Sbjct: 467 aatgagggtagccagctgaaactacagatacagggtctcaaggactccattgagaagctt 526 Query: 486 ctcatatgatttatc-aagacctttcagtgtgatgggcctcgtgtgacacagtttttcag 544 ||||| |||| | | ||||||||||||||||||||||||| | ||||| |||||||| Sbjct: 527 ctcatctgatctgccgaagacctttcagtgtgatgggcctc-agcgacac-ttttttcag 584 Query: 545 gggcttggactggtgatggtgtcttgt 571 |||||||||||||||||||||||||| Sbjct: 585 aggcttggactggtgatggtgtcttgt 611
>gb|AY103642.1| Zea mays PCO105720 mRNA sequence Length = 1169 Score = 331 bits (167), Expect = 2e-87 Identities = 380/447 (85%), Gaps = 3/447 (0%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 ||||| ||||| ||||||||||| || |||||||||||||| |||||||| ||| || Sbjct: 157 aacccgaaggcatacccgctggctgatgcgcagctgacgatgggtatcctcgatatcatc 216 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||||||||||||||||| ||||| ||||||||||| || |||||||| ||||| || Sbjct: 217 cagcaggccgccaactacaaacagcttaagaagggagcgaatgaagcgacgaagaccctg 276 Query: 246 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctc 305 || ||||| ||||||||||| || |||||||| || ||||| ||||| ||||| ||||| Sbjct: 277 aataggggcatatcggagtttgtagtgatggcggcggacacagagcctctcgagatcctg 336 Query: 306 ctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaag 365 ||||||||||| ||| | || ||||| ||||| ||||| ||||| ||||| || || ||| Sbjct: 337 ctccacctccccttgttagctgaggataagaacgtgccatatgtgtttgttccatcgaag 396 Query: 366 caagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagc 425 ||||| ||||| ||||||||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 397 caagctcttggccgtgcttgtggtgtgacaagaccggttattgcttgctcagtgaccagt 456 Query: 426 aatgagggtagccaactgaagcagccgatccagagtctcaaggatgccatcgagaagctt 485 |||||||||||||| ||||| | | ||| ||| |||||||||| |||| ||||||||| Sbjct: 457 aatgagggtagccagctgaaactacagatacagggtctcaaggactccattgagaagctt 516 Query: 486 ctcatatgatttatc-aagacctttcagtgtgatgggcctcgtgtgacacagtttttcag 544 ||||| |||| | | ||||||||||||||||||||||||| | ||||| |||||||| Sbjct: 517 ctcatctgatctgccgaagacctttcagtgtgatgggcctcat-cgacac-ttttttcag 574 Query: 545 gggcttggactggtgatggtgtcttgt 571 |||||||||||||||||||||||||| Sbjct: 575 aggcttggactggtgatggtgtcttgt 601
>emb|CT986267.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 654 Score = 240 bits (121), Expect = 6e-60 Identities = 256/301 (85%) Strand = Plus / Plus Query: 121 cggtcaaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgaca 180 |||| ||||||||||||||||| || |||||||| ||||||| || || ||||||||| Sbjct: 17 cggtgaaccccaaggcctaccccctcgcggacgctcagctgagcatcaccatcctcgacc 76 Query: 181 tcgtccagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaaga 240 | |||||||||||||||||||||||||||||||||||||| ||||||||||| || |||| Sbjct: 77 ttgtccagcaggccgccaactacaagcagctcaagaagggcgccaacgaagccacgaaga 136 Query: 241 ctctcaacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaa 300 | | || ||||| || || |||||||| |||||||| || ||||| |||||||| || | Sbjct: 137 ccttgaataggggcatctctgagttcgtcgtgatggctgccgacaccgagccgcttgaga 196 Query: 301 tcctcctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtccctt 360 || | ||||| ||||| |||| |||||||| ||||||||||| |||||||||||||||| Sbjct: 197 tcttgctccatctcccactgcttgcggaggataagaatgtgccctatgtctttgtccctt 256 Query: 361 caaagcaagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtga 420 |||| ||||| ||||| || || |||||||| || | || |||||||| |||||||||| Sbjct: 257 caaaacaagcacttggtcgagcatgtggagttacacgacctgtcattgcatgttcagtga 316 Query: 421 c 421 | Sbjct: 317 c 317
>emb|CT828274.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA035A13, full insert sequence Length = 673 Score = 214 bits (108), Expect = 4e-52 Identities = 210/244 (86%) Strand = Plus / Plus Query: 189 caggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaac 248 |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 149 caggccgccaactacaagcagctcaagaagggcgccaacgaagcgacgaagacgctcaac 208 Query: 249 aggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctc 308 || || || ||||||||||||||||||| || ||| | ||||| ||||| ||||| ||| Sbjct: 209 agagggatcgcggagttcgtggtgatggcggccgacgccgagcccctcgagatccttctc 268 Query: 309 cacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaa 368 ||||| || | ||||| ||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 269 caccttcccctcctcgccgaggacaagaatgtgccatacgtctttgtcccatcaaagcaa 328 Query: 369 gcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagcaat 428 || || || ||||| ||||| ||||| ||||| || || || || || |||||||||||| Sbjct: 329 gctctcggccgtgcatgtggggtgacgaggcccgtgatcgcctgctcggtgaccagcaat 388 Query: 429 gagg 432 |||| Sbjct: 389 gagg 392
>ref|NM_001070605.1| Oryza sativa (japonica cultivar-group) Os10g0124000 (Os10g0124000) mRNA, complete cds Length = 674 Score = 214 bits (108), Expect = 4e-52 Identities = 210/244 (86%) Strand = Plus / Plus Query: 189 caggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaac 248 |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 146 caggccgccaactacaagcagctcaagaagggcgccaacgaagcgacgaagacgctcaac 205 Query: 249 aggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctc 308 || || || ||||||||||||||||||| || ||| | ||||| ||||| ||||| ||| Sbjct: 206 agagggatcgcggagttcgtggtgatggcggccgacgccgagcccctcgagatccttctc 265 Query: 309 cacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaa 368 ||||| || | ||||| ||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 266 caccttcccctcctcgccgaggacaagaatgtgccatacgtctttgtcccatcaaagcaa 325 Query: 369 gcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagcaat 428 || || || ||||| ||||| ||||| ||||| || || || || || |||||||||||| Sbjct: 326 gctctcggccgtgcatgtggggtgacgaggcccgtgatcgcctgctcggtgaccagcaat 385 Query: 429 gagg 432 |||| Sbjct: 386 gagg 389
>dbj|AK121991.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109K13, full insert sequence Length = 675 Score = 214 bits (108), Expect = 4e-52 Identities = 210/244 (86%) Strand = Plus / Plus Query: 189 caggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaac 248 |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 147 caggccgccaactacaagcagctcaagaagggcgccaacgaagcgacgaagacgctcaac 206 Query: 249 aggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctc 308 || || || ||||||||||||||||||| || ||| | ||||| ||||| ||||| ||| Sbjct: 207 agagggatcgcggagttcgtggtgatggcggccgacgccgagcccctcgagatccttctc 266 Query: 309 cacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaa 368 ||||| || | ||||| ||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 267 caccttcccctcctcgccgaggacaagaatgtgccatacgtctttgtcccatcaaagcaa 326 Query: 369 gcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagcaat 428 || || || ||||| ||||| ||||| ||||| || || || || || |||||||||||| Sbjct: 327 gctctcggccgtgcatgtggggtgacgaggcccgtgatcgcctgctcggtgaccagcaat 386 Query: 429 gagg 432 |||| Sbjct: 387 gagg 390
>emb|CT986335.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 842 Score = 180 bits (91), Expect = 5e-42 Identities = 205/243 (84%) Strand = Plus / Plus Query: 181 tcgtccagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaaga 240 ||||||||||||| || || |||||||||||||||||||| ||||||||||| || |||| Sbjct: 119 tcgtccagcaggctgctaattacaagcagctcaagaagggcgccaacgaagctacgaaga 178 Query: 241 ctctcaacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaa 300 | || |||||||| || || |||||| | |||||||| || ||||| ||||||||||| | Sbjct: 179 cgctgaacaggggtatctctgagttcatagtgatggctgcggacaccgagccgctcgaga 238 Query: 301 tcctcctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtccctt 360 |||||||||| || |||||||| || ||||| ||||||||||| ||||| ||||| || | Sbjct: 239 tcctcctccatcttccgttgcttgctgaggataagaatgtgccctatgtgtttgtgccct 298 Query: 361 caaagcaagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtga 420 |||||||||| ||||| || || || || || || || || |||||||| ||||| |||| Sbjct: 299 caaagcaagcacttggccgagcatgcggggtcacaagacctgtcattgcctgttccgtga 358 Query: 421 cca 423 ||| Sbjct: 359 cca 361
>emb|CT984748.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 843 Score = 180 bits (91), Expect = 5e-42 Identities = 205/243 (84%) Strand = Plus / Plus Query: 181 tcgtccagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaaga 240 ||||||||||||| || || |||||||||||||||||||| ||||||||||| || |||| Sbjct: 119 tcgtccagcaggctgctaattacaagcagctcaagaagggcgccaacgaagctacgaaga 178 Query: 241 ctctcaacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaa 300 | || |||||||| || || |||||| | |||||||| || ||||| ||||||||||| | Sbjct: 179 cgctgaacaggggtatctctgagttcatagtgatggctgcggacaccgagccgctcgaga 238 Query: 301 tcctcctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtccctt 360 |||||||||| || |||||||| || ||||| ||||||||||| ||||| ||||| || | Sbjct: 239 tcctcctccatcttccgttgcttgctgaggataagaatgtgccctatgtgtttgtgccct 298 Query: 361 caaagcaagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtga 420 |||||||||| ||||| || || || || || || || || |||||||| ||||| |||| Sbjct: 299 caaagcaagcacttggccgagcatgcggggtcacaagacctgtcattgcctgttccgtga 358 Query: 421 cca 423 ||| Sbjct: 359 cca 361
>gb|AY389676.1| Hyacinthus orientalis ribosomal protein L7 (RPL7) mRNA, complete cds Length = 675 Score = 155 bits (78), Expect = 3e-34 Identities = 165/194 (85%) Strand = Plus / Plus Query: 183 gtccagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagact 242 ||||||||||| ||||| |||||||||||||| ||||| || || |||||||| |||||| Sbjct: 110 gtccagcaggcggccaattacaagcagctcaaaaagggtgctaatgaagcgactaagact 169 Query: 243 ctcaacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatc 302 || ||||||||||| |||||||| || |||||||| || ||| | ||||| |||||||| Sbjct: 170 ctgaacaggggaatctcggagtttgttgtgatggctgcggacgctgagcccctcgaaatt 229 Query: 303 ctcctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttca 362 || || ||||| || |||| || ||||||||||||||||| ||||||||||| ||||| Sbjct: 230 cttcttcaccttcctctgcttgctgaggacaagaatgtgccctatgtctttgttccttcc 289 Query: 363 aagcaagcccttgg 376 || ||||| ||||| Sbjct: 290 aaacaagcacttgg 303
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 155 bits (78), Expect = 3e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 84692 aaccctaaggcctacccgctggcggacgcgcagctgacgatgaccatcctcgacctcgtc 84751 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaag 231 ||||||||| |||| |||||||||||||||||||| |||||||||| Sbjct: 84752 cagcaggcctccaattacaagcagctcaagaagggggccaacgaag 84797 Score = 139 bits (70), Expect = 2e-29 Identities = 104/114 (91%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 466 aggatgccatcgagaagcttctcatatgatttatcaagacctttcagtgtgatgggcctc 525 ||||||| ||||||||||| ||||| ||||||| |||||||||||||||||||||||||| Sbjct: 86003 aggatgctatcgagaagctcctcatttgatttaccaagacctttcagtgtgatgggcctc 86062 Query: 526 -gtgtgacacagtttttcaggggcttggactggtgatggtgtcttgtctgctag 578 | | ||||||||||||||| |||||||||||||||||||||||| | |||||| Sbjct: 86063 agagcgacacagtttttcagaggcttggactggtgatggtgtcttatttgctag 86116 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 230 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 289 |||||| ||||| || |||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 84886 agcgacgaagaccctgaacaggggtatatcagagttcgtggtgatggcggccgacacgga 84945 Query: 290 gccgctcgaaatcctcctccacctcccgttgctcgcggagga 331 ||||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 84946 gccgctcgagatccttctccacctccccctgctcgcggagga 84987 Score = 103 bits (52), Expect = 9e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 345 tatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtgactaggccggtc 404 ||||| ||||||||||| |||||||||||||| || || ||||| || ||||| || ||| Sbjct: 85785 tatgtttttgtcccttcgaagcaagcccttggccgcgcatgtggcgttactagacctgtc 85844 Query: 405 attgcttgttcagtgaccagcaatgagggtagccaactgaagcagccgatccagagtctc 464 ||||||||||||||||||||||| ||||| || || |||||| ||||| |||| |||| Sbjct: 85845 attgcttgttcagtgaccagcaacgagggcagtcagctgaagacaccgatacagaatctc 85904 Query: 465 aagg 468 |||| Sbjct: 85905 aagg 85908 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccgcggcggccgcctcctcctc 74 |||||||||||||||||||||| Sbjct: 84484 ccgcggcggccgcctcctcctc 84505
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 155 bits (78), Expect = 3e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 7443972 aaccctaaggcctacccgctggcggacgcgcagctgacgatgaccatcctcgacctcgtc 7444031 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaag 231 ||||||||| |||| |||||||||||||||||||| |||||||||| Sbjct: 7444032 cagcaggcctccaattacaagcagctcaagaagggggccaacgaag 7444077 Score = 139 bits (70), Expect = 2e-29 Identities = 104/114 (91%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 466 aggatgccatcgagaagcttctcatatgatttatcaagacctttcagtgtgatgggcctc 525 ||||||| ||||||||||| ||||| ||||||| |||||||||||||||||||||||||| Sbjct: 7445283 aggatgctatcgagaagctcctcatttgatttaccaagacctttcagtgtgatgggcctc 7445342 Query: 526 -gtgtgacacagtttttcaggggcttggactggtgatggtgtcttgtctgctag 578 | | ||||||||||||||| |||||||||||||||||||||||| | |||||| Sbjct: 7445343 agagcgacacagtttttcagaggcttggactggtgatggtgtcttatttgctag 7445396 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 230 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 289 |||||| ||||| || |||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 7444166 agcgacgaagaccctgaacaggggtatatcagagttcgtggtgatggcggccgacacgga 7444225 Query: 290 gccgctcgaaatcctcctccacctcccgttgctcgcggagga 331 ||||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 7444226 gccgctcgagatccttctccacctccccctgctcgcggagga 7444267 Score = 103 bits (52), Expect = 9e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 345 tatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtgactaggccggtc 404 ||||| ||||||||||| |||||||||||||| || || ||||| || ||||| || ||| Sbjct: 7445065 tatgtttttgtcccttcgaagcaagcccttggccgcgcatgtggcgttactagacctgtc 7445124 Query: 405 attgcttgttcagtgaccagcaatgagggtagccaactgaagcagccgatccagagtctc 464 ||||||||||||||||||||||| ||||| || || |||||| ||||| |||| |||| Sbjct: 7445125 attgcttgttcagtgaccagcaacgagggcagtcagctgaagacaccgatacagaatctc 7445184 Query: 465 aagg 468 |||| Sbjct: 7445185 aagg 7445188 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccgcggcggccgcctcctcctc 74 |||||||||||||||||||||| Sbjct: 7443764 ccgcggcggccgcctcctcctc 7443785 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 cgcggcggccgcctcctcctcg 75 |||||||||||||||||||||| Sbjct: 14523428 cgcggcggccgcctcctcctcg 14523449
>gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b06, complete sequence Length = 112592 Score = 125 bits (63), Expect = 3e-25 Identities = 117/135 (86%) Strand = Plus / Minus Query: 334 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 393 |||| ||||| ||||| ||||| || ||||| ||||| ||||| || |||||||| |||| Sbjct: 112090 agaacgtgccatatgtatttgttccatcaaaacaagctcttggccgagcttgtggggtga 112031 Query: 394 ctaggccggtcattgcttgttcagtgaccagcaatgagggtagccaactgaagcagccga 453 | ||||||||||||||||| |||||||||||||||||||||||||| ||||| || | || Sbjct: 112030 caaggccggtcattgcttgctcagtgaccagcaatgagggtagccagctgaaacaacaga 111971 Query: 454 tccagagtctcaagg 468 | ||| ||||||||| Sbjct: 111970 tacagggtctcaagg 111956 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/96 (90%), Gaps = 3/96 (3%) Strand = Plus / Minus Query: 477 gagaagcttctcatatgatttatc-aagacctttcagtgtgatgggcctcgtgtgacaca 535 |||||||||||||| ||||||| | ||||||||||||||||||||||||| | |||||| Sbjct: 111786 gagaagcttctcatctgatttaccgaagacctttcagtgtgatgggcctc-agggacaca 111728 Query: 536 gtttttcaggggcttggactggtgatggtgtcttgt 571 ||||||| |||||||||||||||||||||||||| Sbjct: 111727 -attttcagaggcttggactggtgatggtgtcttgt 111693
>ref|NM_063899.3| Caenorhabditis elegans M28.5 (M28.5) mRNA, complete cds Length = 531 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaat 256 |||||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 103 aactacaaacagctcaagaagggagccaacgaggccaccaagactctcaacagaggaat 161
>emb|Z49911.1|CEM28 Caenorhabditis elegans Cosmid M28, complete sequence Length = 40265 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaat 256 |||||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 38985 aactacaaacagctcaagaagggagccaacgaggccaccaagactctcaacagaggaat 38927
>gb|DQ245794.1| Zea mays clone 20374 mRNA sequence Length = 682 Score = 83.8 bits (42), Expect = 9e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 ||||| |||||||||||| | || || | ||||| ||||||| |||||||| | ||| Sbjct: 83 aaccctaaggcctacccgttagctgattctcagctagcgataacaatcctcgatcttgtc 142 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 ||||| || | |||||||| ||||||||||| ||||| || ||||| |||||||| | Sbjct: 143 cagcaagctacgaactacaaacagctcaagaaaggagctaatgaagctaccaagacattg 202 Query: 246 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctc 305 ||| | || || || |||||||| || ||||| |||||| | ||||| ||||| ||||| Sbjct: 203 aaccgtggtatctctgagttcgttgttatggctgctgacgctgagcctctcgagatcctt 262 Query: 306 ctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgt 355 || || || || | ||||| || |||||||||||||||||||| ||||| Sbjct: 263 cttcatcttcctcttctcgctgaagacaagaatgtgccgtatgtgtttgt 312
>gb|AC079128.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0056A20, complete sequence Length = 151163 Score = 77.8 bits (39), Expect = 5e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 189 caggccgccaactacaagcagctcaagaagggagccaacgaag 231 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 28290 caggccgccaactacaagcagctcaagaagggcgccaacgaag 28332 Score = 77.8 bits (39), Expect = 5e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 334 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 393 |||||||||| || ||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 29264 agaatgtgccatacgtctttgtcccatcaaagcaagctctcggccgtgcatgtggggtga 29323 Query: 394 ctaggccggtcattgcttgttcagtgaccagcaatgagg 432 | ||||| || || || || || |||||||||||||||| Sbjct: 29324 cgaggcccgtgatcgcctgctcggtgaccagcaatgagg 29362 Score = 67.9 bits (34), Expect = 5e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 230 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 289 |||||| ||||| |||||||| || || ||||||||||||||||||| || ||| | || Sbjct: 28418 agcgacgaagacgctcaacagagggatcgcggagttcgtggtgatggcggccgacgccga 28477 Query: 290 gccgctcgaaatcctcctccacctcccgttgctcgcggaggacaag 335 ||| ||||| ||||| |||||||| || | ||||| ||||||||| Sbjct: 28478 gcccctcgagatccttctccaccttcccctcctcgccgaggacaag 28523
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 77.8 bits (39), Expect = 5e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 189 caggccgccaactacaagcagctcaagaagggagccaacgaag 231 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1509717 caggccgccaactacaagcagctcaagaagggcgccaacgaag 1509759 Score = 77.8 bits (39), Expect = 5e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 334 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 393 |||||||||| || ||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 1510691 agaatgtgccatacgtctttgtcccatcaaagcaagctctcggccgtgcatgtggggtga 1510750 Query: 394 ctaggccggtcattgcttgttcagtgaccagcaatgagg 432 | ||||| || || || || || |||||||||||||||| Sbjct: 1510751 cgaggcccgtgatcgcctgctcggtgaccagcaatgagg 1510789 Score = 67.9 bits (34), Expect = 5e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 230 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 289 |||||| ||||| |||||||| || || ||||||||||||||||||| || ||| | || Sbjct: 1509845 agcgacgaagacgctcaacagagggatcgcggagttcgtggtgatggcggccgacgccga 1509904 Query: 290 gccgctcgaaatcctcctccacctcccgttgctcgcggaggacaag 335 ||| ||||| ||||| |||||||| || | ||||| ||||||||| Sbjct: 1509905 gcccctcgagatccttctccaccttcccctcctcgccgaggacaag 1509950
>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09, complete sequence Length = 154181 Score = 77.8 bits (39), Expect = 5e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 189 caggccgccaactacaagcagctcaagaagggagccaacgaag 231 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 122471 caggccgccaactacaagcagctcaagaagggcgccaacgaag 122513 Score = 77.8 bits (39), Expect = 5e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 334 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 393 |||||||||| || ||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 123445 agaatgtgccatacgtctttgtcccatcaaagcaagctctcggccgtgcatgtggggtga 123504 Query: 394 ctaggccggtcattgcttgttcagtgaccagcaatgagg 432 | ||||| || || || || || |||||||||||||||| Sbjct: 123505 cgaggcccgtgatcgcctgctcggtgaccagcaatgagg 123543 Score = 67.9 bits (34), Expect = 5e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 230 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 289 |||||| ||||| |||||||| || || ||||||||||||||||||| || ||| | || Sbjct: 122599 agcgacgaagacgctcaacagagggatcgcggagttcgtggtgatggcggccgacgccga 122658 Query: 290 gccgctcgaaatcctcctccacctcccgttgctcgcggaggacaag 335 ||| ||||| ||||| |||||||| || | ||||| ||||||||| Sbjct: 122659 gcccctcgagatccttctccaccttcccctcctcgccgaggacaag 122704
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 77.8 bits (39), Expect = 5e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 189 caggccgccaactacaagcagctcaagaagggagccaacgaag 231 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1509717 caggccgccaactacaagcagctcaagaagggcgccaacgaag 1509759 Score = 77.8 bits (39), Expect = 5e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 334 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 393 |||||||||| || ||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 1510691 agaatgtgccatacgtctttgtcccatcaaagcaagctctcggccgtgcatgtggggtga 1510750 Query: 394 ctaggccggtcattgcttgttcagtgaccagcaatgagg 432 | ||||| || || || || || |||||||||||||||| Sbjct: 1510751 cgaggcccgtgatcgcctgctcggtgaccagcaatgagg 1510789 Score = 67.9 bits (34), Expect = 5e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 230 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 289 |||||| ||||| |||||||| || || ||||||||||||||||||| || ||| | || Sbjct: 1509845 agcgacgaagacgctcaacagagggatcgcggagttcgtggtgatggcggccgacgccga 1509904 Query: 290 gccgctcgaaatcctcctccacctcccgttgctcgcggaggacaag 335 ||| ||||| ||||| |||||||| || | ||||| ||||||||| Sbjct: 1509905 gcccctcgagatccttctccaccttcccctcctcgccgaggacaag 1509950
>ref|XM_531713.2| PREDICTED: Canis familiaris similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1) (LOC474484), mRNA Length = 1414 Score = 67.9 bits (34), Expect = 5e-08 Identities = 172/218 (78%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||||||||| ||||| || |||||||| || || Sbjct: 156 aactacaagcagcttcggaaaggagccaacgaagccaccaaaaccctcaacagaggcatc 215 Query: 258 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 317 || |||||| | |||||||| || ||| | ||||| || |||||| |||| ||||| ||| Sbjct: 216 tctgagttcatcgtgatggctgcagacgctgagcctctggaaatcatcctgcaccttccg 275 Query: 318 ttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttggg 377 |||| || || ||||| ||||| || || ||||| | || ||||| ||||| ||| Sbjct: 276 ctgctgtgtgaagataagaacgtgccctacgtgtttgtgcgctccaagcaggccctcggg 335 Query: 378 cgtgcttgtggagtgactaggccggtcattgcttgttc 415 || || ||||| ||| | ||||| |||||||| ||||| Sbjct: 336 cgggcctgtggggtgtccaggcctgtcattgcctgttc 373
>ref|XM_571849.1| Cryptococcus neoformans var. neoformans JEC21 snRNP subunit (CNG01500) partial mRNA Length = 596 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 201 tacaagcagctcaagaagggagccaacgaagcgaccaagac 241 |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 196 tacaagcagctcaagaagggtgccaacgaagccaccaagac 236
>ref|XM_001176138.1| PREDICTED: Strongylocentrotus purpuratus similar to hoip-prov protein (LOC587294), mRNA Length = 1271 Score = 63.9 bits (32), Expect = 8e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagac 241 ||||| |||| ||| || ||||||||||||||||||||||| ||||| |||||||| Sbjct: 219 cagcaagccgtcaattataagcagctcaagaagggagccaatgaagccaccaagac 274
>ref|XM_787029.2| PREDICTED: Strongylocentrotus purpuratus similar to hoip-prov protein (LOC587294), mRNA Length = 1271 Score = 63.9 bits (32), Expect = 8e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagac 241 ||||| |||| ||| || ||||||||||||||||||||||| ||||| |||||||| Sbjct: 219 cagcaagccgtcaattataagcagctcaagaagggagccaatgaagccaccaagac 274
>ref|NM_122023.2| Arabidopsis thaliana RNA binding / structural constituent of ribosome (AT5G20160) mRNA, complete cds Length = 719 Score = 63.9 bits (32), Expect = 8e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 327 gaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgt 386 ||||| |||||||| || ||||||||||| ||||||||||||||| | || | || ||| Sbjct: 313 gaggataagaatgttccttatgtctttgtgccttcaaagcaagccttgggaagagcctgt 372 Query: 387 ggagtgactaggccggtcattgcttgttcagt 418 || |||||||| || || || ||||||||||| Sbjct: 373 ggtgtgactagacctgttatcgcttgttcagt 404 Score = 54.0 bits (27), Expect = 8e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactct 244 ||||||||||||||||||||||| || || ||||| || |||||||| Sbjct: 184 aactacaagcagctcaagaagggtgctaatgaagctacgaagactct 230
>ref|NM_180525.1| Arabidopsis thaliana RNA binding / structural constituent of ribosome (AT5G20160) mRNA, complete cds Length = 815 Score = 63.9 bits (32), Expect = 8e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 327 gaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgt 386 ||||| |||||||| || ||||||||||| ||||||||||||||| | || | || ||| Sbjct: 409 gaggataagaatgttccttatgtctttgtgccttcaaagcaagccttgggaagagcctgt 468 Query: 387 ggagtgactaggccggtcattgcttgttcagt 418 || |||||||| || || || ||||||||||| Sbjct: 469 ggtgtgactagacctgttatcgcttgttcagt 500 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaaggg 220 ||||||||||||||||||||||| Sbjct: 184 aactacaagcagctcaagaaggg 206
>gb|AY094018.1| Arabidopsis thaliana AT5g20160/F5O24_50 mRNA, complete cds Length = 387 Score = 63.9 bits (32), Expect = 8e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 327 gaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgt 386 ||||| |||||||| || ||||||||||| ||||||||||||||| | || | || ||| Sbjct: 220 gaggataagaatgttccttatgtctttgtgccttcaaagcaagccttgggaagagcctgt 279 Query: 387 ggagtgactaggccggtcattgcttgttcagt 418 || |||||||| || || || ||||||||||| Sbjct: 280 ggtgtgactagacctgttatcgcttgttcagt 311 Score = 54.0 bits (27), Expect = 8e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactct 244 ||||||||||||||||||||||| || || ||||| || |||||||| Sbjct: 91 aactacaagcagctcaagaagggtgctaatgaagctacgaagactct 137
>gb|AY086996.1| Arabidopsis thaliana clone 30288 mRNA, complete sequence Length = 726 Score = 63.9 bits (32), Expect = 8e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 327 gaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgt 386 ||||| |||||||| || ||||||||||| ||||||||||||||| | || | || ||| Sbjct: 313 gaggataagaatgttccttatgtctttgtgccttcaaagcaagccttgggaagagcctgt 372 Query: 387 ggagtgactaggccggtcattgcttgttcagt 418 || |||||||| || || || ||||||||||| Sbjct: 373 ggtgtgactagacctgttatcgcttgttcagt 404 Score = 54.0 bits (27), Expect = 8e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactct 244 ||||||||||||||||||||||| || || ||||| || |||||||| Sbjct: 184 aactacaagcagctcaagaagggtgctaatgaagctacgaagactct 230
>gb|AY048213.1| Arabidopsis thaliana AT5g20160/F5O24_50 mRNA, complete cds Length = 716 Score = 63.9 bits (32), Expect = 8e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 327 gaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgt 386 ||||| |||||||| || ||||||||||| ||||||||||||||| | || | || ||| Sbjct: 313 gaggataagaatgttccttatgtctttgtgccttcaaagcaagccttgggaagagcctgt 372 Query: 387 ggagtgactaggccggtcattgcttgttcagt 418 || |||||||| || || || ||||||||||| Sbjct: 373 ggtgtgactagacctgttatcgcttgttcagt 404 Score = 54.0 bits (27), Expect = 8e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactct 244 ||||||||||||||||||||||| || || ||||| || |||||||| Sbjct: 184 aactacaagcagctcaagaagggtgctaatgaagctacgaagactct 230
>ref|XM_757414.1| Ustilago maydis 521 hypothetical protein (UM06360.1) partial mRNA Length = 381 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 170 gatcctcgacatcgtccagcaggccgccaactacaagcagctcaagaagggagccaacga 229 |||||||||| || | |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 57 gatcctcgacctcattcagcaggcttcgcactacaagcagctcaagaagggtgctaacga 116 Query: 230 agcgaccaagactctcaac 248 || |||||||| |||||| Sbjct: 117 ggccaccaagacgctcaac 135 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 327 gaggacaagaatgtgccgtatgtctttgtcccttc 361 ||||||||||| ||||| || |||||||||||||| Sbjct: 214 gaggacaagaacgtgccttacgtctttgtcccttc 248
>ref|XM_505832.1| Yarrowia lipolytica CLIB122, YALI0F24497g predicted mRNA Length = 381 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 207 cagctcaagaagggagccaacgaagcgaccaagactctcaac 248 ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 94 cagctcaagaagggagccaacgaggccaccaagaccctcaac 135
>ref|NM_200312.1| Danio rerio zgc:56066 (zgc:56066), mRNA gb|BC050495.1| Danio rerio zgc:56066, mRNA (cDNA clone MGC:56066 IMAGE:3820656), complete cds Length = 1751 Score = 60.0 bits (30), Expect = 1e-05 Identities = 135/170 (79%) Strand = Plus / Plus Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||||| ||||| ||||| ||||| | ||| || ||||||||||| || || || || Sbjct: 233 cagcaggcagccaattacaaacagctgaggaaaggggccaacgaagccactaaaaccctg 292 Query: 246 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctc 305 ||| ||||||| || |||||| | |||||||| || ||| | |||||||| || ||| || Sbjct: 293 aaccggggaatctcagagttcatcgtgatggcggccgacgcagagccgctggagatcatc 352 Query: 306 ctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgt 355 || || || ||| |||| ||||||||||| || |||||||| ||||| Sbjct: 353 ctgcatctgccgctgctgtgcgaggacaagaacgtcccgtatgtgtttgt 402
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 207 cagctcaagaagggagccaacgaagcgaccaagactctcaac 248 ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 3187507 cagctcaagaagggagccaacgaggccaccaagaccctcaac 3187548
>dbj|AB226025.1| Aspergillus oryzae cDNA, contig sequence: AoEST2881 Length = 703 Score = 58.0 bits (29), Expect = 5e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 207 cagctcaagaagggagccaacgaagcgaccaagactctcaa 247 ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 167 cagctgaagaagggagcaaacgaagcgaccaagacactcaa 207
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 58.0 bits (29), Expect = 5e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 207 cagctcaagaagggagccaacgaagcgaccaagactctcaa 247 ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 1888725 cagctgaagaagggagcaaacgaagcgaccaagacactcaa 1888685
>ref|XM_744631.1| Aspergillus fumigatus Af293 snRNP and snoRNP protein Snu13 (Afu2g05950) partial mRNA Length = 381 Score = 58.0 bits (29), Expect = 5e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 207 cagctcaagaagggagccaacgaagcgaccaagactctcaa 247 |||||||||||||| |||||||| || |||||||||||||| Sbjct: 94 cagctcaagaagggtgccaacgaggctaccaagactctcaa 134
>gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24 Length = 101458 Score = 58.0 bits (29), Expect = 5e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 334 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 393 ||||||| || ||||||||||| ||||||||||||||| | || | || ||||| |||| Sbjct: 8737 agaatgttccttatgtctttgtgccttcaaagcaagccttgggaagagcctgtggtgtga 8678 Query: 394 ctaggccggtcattgcttgttcagt 418 |||| || || || ||||||||||| Sbjct: 8677 ctagacctgttatcgcttgttcagt 8653 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Minus Query: 198 aactacaagcagctcaagaaggg 220 ||||||||||||||||||||||| Sbjct: 9295 aactacaagcagctcaagaaggg 9273
>ref|XM_416225.2| PREDICTED: Gallus gallus similar to LOC495253 protein (LOC417986), mRNA Length = 2259 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 128 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 187 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 188 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 247 Query: 246 aacaggggaatatcggagttcgtggtgatggc 277 ||| | |||||| | |||||| | |||||||| Sbjct: 248 aaccgaggaatagcagagttcatcgtgatggc 279
>ref|NM_118364.1| Arabidopsis thaliana RNA binding / structural constituent of ribosome (AT4G22380) mRNA, complete cds Length = 387 Score = 56.0 bits (28), Expect = 2e-04 Identities = 175/224 (78%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||||||||||| || ||||| ||||| || | ||| | ||||| Sbjct: 91 aactacaagcagcttaagaagggagctaatgaagctaccaaaacattgaaccgtggaatc 150 Query: 258 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 317 || |||||||| || ||||| ||||| | || || || || || || || || || || Sbjct: 151 tctgagttcgttgttatggctgctgatgctgaaccacttgagattcttcttcatcttcct 210 Query: 318 ttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttggg 377 ||||| || || || ||||||||||| ||||| ||||| ||||| || ||||| | || Sbjct: 211 ttgcttgccgaagataagaatgtgccatatgtgtttgtaccttcgaaacaagcattggga 270 Query: 378 cgtgcttgtggagtgactaggccggtcattgcttgttcagtgac 421 | || |||||||| || || || || ||||||||||||||||| Sbjct: 271 agagcatgtggagtaacaagacctgttattgcttgttcagtgac 314
>gb|BT024580.1| Arabidopsis thaliana At4g22380 mRNA, complete cds Length = 387 Score = 56.0 bits (28), Expect = 2e-04 Identities = 175/224 (78%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||||||||||| || ||||| ||||| || | ||| | ||||| Sbjct: 91 aactacaagcagcttaagaagggagctaatgaagctaccaaaacattgaaccgtggaatc 150 Query: 258 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 317 || |||||||| || ||||| ||||| | || || || || || || || || || || Sbjct: 151 tctgagttcgttgttatggctgctgatgctgaaccacttgagattcttcttcatcttcct 210 Query: 318 ttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttggg 377 ||||| || || || ||||||||||| ||||| ||||| ||||| || ||||| | || Sbjct: 211 ttgcttgccgaagataagaatgtgccatatgtgtttgtaccttcgaaacaagcattggga 270 Query: 378 cgtgcttgtggagtgactaggccggtcattgcttgttcagtgac 421 | || |||||||| || || || || ||||||||||||||||| Sbjct: 271 agagcatgtggagtaacaagacctgttattgcttgttcagtgac 314
>gb|AY086674.1| Arabidopsis thaliana clone 2673 mRNA, complete sequence Length = 624 Score = 56.0 bits (28), Expect = 2e-04 Identities = 175/224 (78%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||||||||||| || ||||| ||||| || | ||| | ||||| Sbjct: 169 aactacaagcagcttaagaagggagctaatgaagctaccaaaacattgaaccgtggaatc 228 Query: 258 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 317 || |||||||| || ||||| ||||| | || || || || || || || || || || Sbjct: 229 tctgagttcgttgttatggctgctgatgctgaaccacttgagattcttcttcatcttcct 288 Query: 318 ttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttggg 377 ||||| || || || ||||||||||| ||||| ||||| ||||| || ||||| | || Sbjct: 289 ttgcttgccgaagataagaatgtgccatatgtgtttgtaccttcgaaacaagcattggga 348 Query: 378 cgtgcttgtggagtgactaggccggtcattgcttgttcagtgac 421 | || |||||||| || || || || ||||||||||||||||| Sbjct: 349 agagcatgtggagtaacaagacctgttattgcttgttcagtgac 392
>emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cosmid contig 12F11 Length = 74317 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 172 tcctcgacatcgtccagcaggccgccaactacaagcagctcaagaagggagccaacgaag 231 |||||||| ||||||||||||| | |||||| |||||||||||||| |||||||| | Sbjct: 35133 tcctcgactgcgtccagcaggccagccactacagacagctcaagaagggtgccaacgagg 35074 Query: 232 cgaccaag 239 | |||||| Sbjct: 35073 ccaccaag 35066
>ref|XM_956324.1| Neurospora crassa OR74A probable 13 kD U4/U6.U5 snRNP associate protein [MIPS] (NCU01331.1) partial mRNA Length = 387 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 172 tcctcgacatcgtccagcaggccgccaactacaagcagctcaagaagggagccaacgaag 231 |||||||| ||||||||||||| | |||||| |||||||||||||| |||||||| | Sbjct: 65 tcctcgactgcgtccagcaggccagccactacagacagctcaagaagggtgccaacgagg 124 Query: 232 cgaccaag 239 | |||||| Sbjct: 125 ccaccaag 132
>emb|BX950527.2| Gallus gallus finished cDNA, clone ChEST568g13 Length = 801 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 101 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 160 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 161 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 220 Query: 246 aacaggggaatatcggagttcgtggtgatggc 277 ||| | |||||| | |||||| | |||||||| Sbjct: 221 aaccgaggaatagcagagttcatcgtgatggc 252
>emb|BX931143.2| Gallus gallus finished cDNA, clone ChEST203b22 Length = 723 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 95 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 154 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 155 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 214 Query: 246 aacaggggaatatcggagttcgtggtgatggc 277 ||| | |||||| | |||||| | |||||||| Sbjct: 215 aaccgaggaatagcagagttcatcgtgatggc 246
>emb|BX934076.2| Gallus gallus finished cDNA, clone ChEST55d24 Length = 1170 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 116 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 175 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 176 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 235 Query: 246 aacaggggaatatcggagttcgtggtgatggc 277 ||| | |||||| | |||||| | |||||||| Sbjct: 236 aaccgaggaatagcagagttcatcgtgatggc 267
>emb|BX932329.2| Gallus gallus finished cDNA, clone ChEST359i7 Length = 818 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 190 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 249 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 250 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 309 Query: 246 aacaggggaatatcggagttcgtggtgatggc 277 ||| | |||||| | |||||| | |||||||| Sbjct: 310 aaccgaggaatagcagagttcatcgtgatggc 341
>emb|CR352576.1| Gallus gallus finished cDNA, clone ChEST831m24 Length = 727 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 99 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 158 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 159 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 218 Query: 246 aacaggggaatatcggagttcgtggtgatggc 277 ||| | |||||| | |||||| | |||||||| Sbjct: 219 aaccgaggaatagcagagttcatcgtgatggc 250
>emb|BX936171.1| Gallus gallus finished cDNA, clone ChEST145m8 Length = 1144 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 126 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 185 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 90 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 149 Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 150 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 209 Query: 246 aacaggggaatatcggagttcgtggtgatggc 277 ||| | |||||| | |||||| | |||||||| Sbjct: 210 aaccgaggaatagcagagttcatcgtgatggc 241
>ref|XR_020265.1| PREDICTED: Pan troglodytes similar to nuclear protein-NHP2-like protein (LOC739792), mRNA Length = 532 Score = 54.0 bits (27), Expect = 8e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| |||| |||||||||| || ||||| || || |||||||| || Sbjct: 91 aactacaagcagcttcagaaaagagccaacgaggccaccaaaacccttaacaggggcatc 150 Query: 258 tcggagttcgtggtgatggcagctgacacggagcc 292 || |||||| | |||||||| || ||||| ||||| Sbjct: 151 tctgagttcatcgtgatggctgcagacaccgagcc 185
>ref|XR_019424.1| PREDICTED: Homo sapiens similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC647503), mRNA Length = 386 Score = 54.0 bits (27), Expect = 8e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| |||| |||||||||| || ||||| || || |||||||| || Sbjct: 91 aactacaagcagcttcagaaaagagccaacgaggccaccaaaacccttaacaggggcatc 150 Query: 258 tcggagttcgtggtgatggcagctgacacggagcc 292 || |||||| | |||||||| || ||||| ||||| Sbjct: 151 tctgagttcatcgtgatggctgcagacaccgagcc 185
>ref|XM_992454.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC434401), mRNA Length = 1274 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 201 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 260 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 261 tctgagttcattgtgatggcagc 283
>ref|XM_486217.4| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC434401), mRNA Length = 1274 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 201 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 260 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 261 tctgagttcattgtgatggcagc 283
>gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosome 9, complete sequence Length = 215980 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 84686 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 84745 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 84746 tctgagttcattgtgatggcagc 84768
>gb|BC046579.1| Xenopus laevis NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:53430 IMAGE:5571836), complete cds Length = 812 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 201 tacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaatatcg 260 |||||||||||| ||||| ||||||||||| || ||||| || ||||| || ||||| Sbjct: 179 tacaagcagctccgcaagggtgccaacgaagctacaaagaccctaaacagaggcatatct 238 Query: 261 gagttcgtggtgatggcagctga 283 |||||| | || ||||||||||| Sbjct: 239 gagttcatagtcatggcagctga 261
>dbj|AK134943.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430523H23 product:sperm specific antigen 1, full insert sequence Length = 1763 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 138 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 197 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 198 tctgagttcattgtgatggcagc 220
>ref|NM_011482.3| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) (Nhp2l1), mRNA dbj|AK145391.1| Mus musculus morula whole body morula cDNA, RIKEN full-length enriched library, clone:I0C0032L12 product:sperm specific antigen 1, full insert sequence Length = 1259 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 202 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 261 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 262 tctgagttcattgtgatggcagc 284
>ref|NM_212515.1| Rattus norvegicus similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27) (MGC72932), mRNA gb|BC058493.1| Rattus norvegicus similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27), mRNA (cDNA clone MGC:72932 IMAGE:6887059), complete cds Length = 635 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 205 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 264 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 265 tctgagttcattgtgatggcagc 287
>dbj|AK145608.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0021G14 product:sperm specific antigen 1, full insert sequence Length = 1244 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 182 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 241 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 242 tctgagttcattgtgatggcagc 264
>dbj|AK168930.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920065L05 product:sperm specific antigen 1, full insert sequence Length = 1210 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 153 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 212 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 213 tctgagttcattgtgatggcagc 235
>dbj|AK168808.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920056H18 product:NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27) homolog [Homo sapiens], full insert sequence Length = 836 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 170 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 229 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 230 tctgagttcattgtgatggcagc 252
>dbj|AK169103.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920080B21 product:sperm specific antigen 1, full insert sequence Length = 1247 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 184 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 243 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 244 tctgagttcattgtgatggcagc 266
>dbj|AK004489.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1190005A22 product:sperm specific antigen 1, full insert sequence Length = 1210 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 148 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 207 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 208 tctgagttcattgtgatggcagc 230
>gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228481 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| |||| ||||||| ||||| | ||| ||||||||||| || || Sbjct: 83355 aactacaagcagcttcagaaaggagccagtgaagccagcaaaactctcaacagaggcatc 83414 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 83415 tctgagttcattgtgatggcagc 83437
>gb|AC156559.3| Mus musculus BAC clone RP24-421K17 from chromosome 13, complete sequence Length = 151183 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 ||||||||| |||| |||| |||||||| ||||| ||||| ||||||||||| || || Sbjct: 65791 aactacaagaagcttcagaaaggagccaatgaagccaccaaaactctcaacagaggcatc 65732 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | |||| |||||| Sbjct: 65731 tctgagttcattgtgaaggcagc 65709
>gb|AC127070.10| Homo sapiens 12 BAC RP11-46H11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181012 Score = 54.0 bits (27), Expect = 8e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| |||| |||||||||| || ||||| || || |||||||| || Sbjct: 49742 aactacaagcagcttcagaaaagagccaacgaggccaccaaaacccttaacaggggcatc 49683 Query: 258 tcggagttcgtggtgatggcagctgacacggagcc 292 || |||||| | |||||||| || ||||| ||||| Sbjct: 49682 tctgagttcatcgtgatggctgcagacaccgagcc 49648
>gb|BC083315.1| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:101925 IMAGE:5714819), complete cds Length = 1201 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 122 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 181 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 182 tctgagttcattgtgatggcagc 204
>gb|BC054450.1| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:62619 IMAGE:6491298), complete cds Length = 1218 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 146 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 205 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 206 tctgagttcattgtgatggcagc 228
>gb|BC026755.1| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:25294 IMAGE:3154066), complete cds Length = 1226 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 146 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 205 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 206 tctgagttcattgtgatggcagc 228
>emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chromosome 9, complete sequence Length = 228508 Score = 54.0 bits (27), Expect = 8e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 209762 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 209821 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 209822 tctgagttcattgtgatggcagc 209844
>ref|XR_004088.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC636276), mRNA Length = 1155 Score = 52.0 bits (26), Expect = 0.003 Identities = 68/82 (82%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 91 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 150 Query: 258 tcggagttcgtggtgatggcag 279 || |||||| | |||||||||| Sbjct: 151 tctgagttcattgtgatggcag 172
>ref|XM_365765.1| Magnaporthe grisea 70-15 hypothetical protein (MG02467.4) partial mRNA Length = 381 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 207 cagctcaagaagggagccaacgaagcgaccaagactct 244 ||||| ||||||||||||||||| || ||||||||||| Sbjct: 94 cagctgaagaagggagccaacgaggctaccaagactct 131
>ref|NM_203663.1| Xenopus tropicalis hypothetical protein MGC75724 (MGC75724), mRNA gb|BC061279.1| Xenopus tropicalis hypothetical protein MGC75724, mRNA (cDNA clone MGC:75724 IMAGE:5380980), complete cds Length = 848 Score = 52.0 bits (26), Expect = 0.003 Identities = 77/94 (81%) Strand = Plus / Plus Query: 330 gacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtgga 389 ||||||||||| || ||||| ||||| | || |||||||| ||||| | ||||||||| Sbjct: 328 gacaagaatgtcccctatgtgtttgtgcgctccaagcaagcacttggaagagcttgtgga 387 Query: 390 gtgactaggccggtcattgcttgttcagtgacca 423 || ||||||| || ||||||||| |||| |||| Sbjct: 388 gtctctaggccagtgattgcttgtgcagtcacca 421
>gb|BC066453.1| Danio rerio zgc:56066, mRNA (cDNA clone MGC:77417 IMAGE:6970302), complete cds Length = 1786 Score = 52.0 bits (26), Expect = 0.003 Identities = 89/110 (80%) Strand = Plus / Plus Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||||| ||||| ||||| ||||| | ||| || ||||||||||| || || || || Sbjct: 225 cagcaggcagccaattacaaacagctgaggaaaggggccaacgaagccactaaaaccctg 284 Query: 246 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgct 295 ||| ||||||| || |||||| | |||||||| || ||| | |||||||| Sbjct: 285 aaccggggaatctcagagttcatcgtgatggcggccgacgcagagccgct 334
>ref|XM_860169.1| PREDICTED: Canis familiaris similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1), transcript variant 2 (LOC609886), mRNA Length = 1394 Score = 52.0 bits (26), Expect = 0.003 Identities = 170/218 (77%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||||||||| || || || |||||||| || || Sbjct: 133 aactacaagcagcttcggaaaggagccaacgaagccactaaaaccctcaacagaggcatc 192 Query: 258 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 317 || |||||| | |||||||| || ||| | |||| || |||||| |||| ||||| ||| Sbjct: 193 tctgagttcatcgtgatggctgcagacgctaagcctctggaaatcatcctgcaccttccg 252 Query: 318 ttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttggg 377 |||| || || ||||| ||||| || || ||||| | || ||||| ||||| ||| Sbjct: 253 ctgctgtgtgaagataagaacgtgccctacgtgtttgtgcgctccaagcaggccctcggg 312 Query: 378 cgtgcttgtggagtgactaggccggtcattgcttgttc 415 || || ||||| ||| | ||||| |||||||| ||||| Sbjct: 313 cgggcctgtggggtgtccaggcctgtcattgcctgttc 350
>ref|XM_847115.1| PREDICTED: Canis familiaris similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1), transcript variant 1 (LOC609886), mRNA Length = 735 Score = 52.0 bits (26), Expect = 0.003 Identities = 170/218 (77%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||||||||| || || || |||||||| || || Sbjct: 105 aactacaagcagcttcggaaaggagccaacgaagccactaaaaccctcaacagaggcatc 164 Query: 258 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 317 || |||||| | |||||||| || ||| | |||| || |||||| |||| ||||| ||| Sbjct: 165 tctgagttcatcgtgatggctgcagacgctaagcctctggaaatcatcctgcaccttccg 224 Query: 318 ttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttggg 377 |||| || || ||||| ||||| || || ||||| | || ||||| ||||| ||| Sbjct: 225 ctgctgtgtgaagataagaacgtgccctacgtgtttgtgcgctccaagcaggccctcggg 284 Query: 378 cgtgcttgtggagtgactaggccggtcattgcttgttc 415 || || ||||| ||| | ||||| |||||||| ||||| Sbjct: 285 cgggcctgtggggtgtccaggcctgtcattgcctgttc 322
>ref|XM_697178.1| PREDICTED: Danio rerio hypothetical protein LOC554671 (LOC554671), mRNA Length = 1702 Score = 52.0 bits (26), Expect = 0.003 Identities = 89/110 (80%) Strand = Plus / Plus Query: 186 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 245 |||||||| ||||| ||||| ||||| | ||| || ||||||||||| || || || || Sbjct: 223 cagcaggcagccaattacaaacagctgaggaaaggggccaacgaagccactaaaaccctg 282 Query: 246 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgct 295 ||| ||||||| || |||||| | |||||||| || ||| | |||||||| Sbjct: 283 aaccggggaatctcagagttcatcgtgatggcggccgacgcagagccgct 332
>emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 57 Length = 199577 Score = 52.0 bits (26), Expect = 0.003 Identities = 71/86 (82%) Strand = Plus / Minus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||||||||||| || ||||| ||||| || | ||| | ||||| Sbjct: 49539 aactacaagcagcttaagaagggagctaatgaagctaccaaaacattgaaccgtggaatc 49480 Query: 258 tcggagttcgtggtgatggcagctga 283 || |||||||| || ||||| ||||| Sbjct: 49479 tctgagttcgttgttatggctgctga 49454
>emb|AL033545.2|ATF7K2 Arabidopsis thaliana DNA chromosome 4, BAC clone F7K2 (ESSA project) Length = 106702 Score = 52.0 bits (26), Expect = 0.003 Identities = 71/86 (82%) Strand = Plus / Minus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||||||||||| || ||||| ||||| || | ||| | ||||| Sbjct: 731 aactacaagcagcttaagaagggagctaatgaagctaccaaaacattgaaccgtggaatc 672 Query: 258 tcggagttcgtggtgatggcagctga 283 || |||||||| || ||||| ||||| Sbjct: 671 tctgagttcgttgttatggctgctga 646
>emb|CR760372.2| Xenopus tropicalis finished cDNA, clone TNeu005n20 Length = 789 Score = 52.0 bits (26), Expect = 0.003 Identities = 77/94 (81%) Strand = Plus / Plus Query: 330 gacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtgga 389 ||||||||||| || ||||| ||||| | || |||||||| ||||| | ||||||||| Sbjct: 284 gacaagaatgtcccctatgtgtttgtgcgctccaagcaagcacttggaagagcttgtgga 343 Query: 390 gtgactaggccggtcattgcttgttcagtgacca 423 || ||||||| || ||||||||| |||| |||| Sbjct: 344 gtctctaggccagtgattgcttgtgcagtcacca 377
>emb|CR761482.2| Xenopus tropicalis finished cDNA, clone TGas123b15 Length = 808 Score = 52.0 bits (26), Expect = 0.003 Identities = 77/94 (81%) Strand = Plus / Plus Query: 330 gacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtgga 389 ||||||||||| || ||||| ||||| | || |||||||| ||||| | ||||||||| Sbjct: 284 gacaagaatgtcccctatgtgtttgtgcgctccaagcaagcacttggaagagcttgtgga 343 Query: 390 gtgactaggccggtcattgcttgttcagtgacca 423 || ||||||| || ||||||||| |||| |||| Sbjct: 344 gtctctaggccagtgattgcttgtgcagtcacca 377
>emb|AL929165.9| Mouse DNA sequence from clone RP23-446D4 on chromosome 2, complete sequence Length = 181326 Score = 52.0 bits (26), Expect = 0.003 Identities = 68/82 (82%) Strand = Plus / Minus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 39936 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 39877 Query: 258 tcggagttcgtggtgatggcag 279 || |||||| | |||||||||| Sbjct: 39876 tctgagttcattgtgatggcag 39855
>gb|BT027900.1| Gasterosteus aculeatus clone CNB59-H09 mRNA sequence Length = 824 Score = 48.1 bits (24), Expect = 0.047 Identities = 30/32 (93%) Strand = Plus / Plus Query: 123 gtcaaccccaaggcctacccgctggcggacgc 154 |||||||| ||||||||||||||||| ||||| Sbjct: 157 gtcaacccgaaggcctacccgctggccgacgc 188
>ref|NM_117330.2| Arabidopsis thaliana RNA binding / structural constituent of ribosome (AT4G12600) mRNA, complete cds Length = 754 Score = 48.1 bits (24), Expect = 0.047 Identities = 39/44 (88%) Strand = Plus / Plus Query: 333 aagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgg 376 ||||||||||||||||| ||||| || || || ||||||||||| Sbjct: 320 aagaatgtgccgtatgtgtttgtgccatcgaaacaagcccttgg 363
>gb|AF361618.1| Arabidopsis thaliana AT4g12600/T1P17_190 mRNA, complete cds Length = 679 Score = 48.1 bits (24), Expect = 0.047 Identities = 39/44 (88%) Strand = Plus / Plus Query: 333 aagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgg 376 ||||||||||||||||| ||||| || || || ||||||||||| Sbjct: 296 aagaatgtgccgtatgtgtttgtgccatcgaaacaagcccttgg 339
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 48.1 bits (24), Expect = 0.047 Identities = 30/32 (93%) Strand = Plus / Plus Query: 213 aagaagggagccaacgaagcgaccaagactct 244 |||||||| |||||||| |||||||||||||| Sbjct: 497936 aagaagggtgccaacgaggcgaccaagactct 497967
>gb|AY055095.1| Arabidopsis thaliana AT4g12600/T1P17_190 mRNA, complete cds Length = 387 Score = 48.1 bits (24), Expect = 0.047 Identities = 39/44 (88%) Strand = Plus / Plus Query: 333 aagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgg 376 ||||||||||||||||| ||||| || || || ||||||||||| Sbjct: 226 aagaatgtgccgtatgtgtttgtgccatcgaaacaagcccttgg 269
>gb|AY087261.1| Arabidopsis thaliana clone 33381 mRNA, complete sequence Length = 715 Score = 48.1 bits (24), Expect = 0.047 Identities = 39/44 (88%) Strand = Plus / Plus Query: 333 aagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgg 376 ||||||||||||||||| ||||| || || || ||||||||||| Sbjct: 320 aagaatgtgccgtatgtgtttgtgccatcgaaacaagcccttgg 363
>ref|NM_210145.1| Eremothecium gossypii AEL070Wp (AEL070W), mRNA Length = 384 Score = 48.1 bits (24), Expect = 0.047 Identities = 30/32 (93%) Strand = Plus / Plus Query: 213 aagaagggagccaacgaagcgaccaagactct 244 |||||||| |||||||| |||||||||||||| Sbjct: 103 aagaagggtgccaacgaggcgaccaagactct 134
>ref|XM_924350.2| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1, transcript variant 2 (LOC637555), mRNA Length = 1274 Score = 46.1 bits (23), Expect = 0.19 Identities = 68/83 (81%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 200 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 259 Query: 258 tcggagttcgtggtgatggcagc 280 || ||||| | ||||||||||| Sbjct: 260 tctgagttaattgtgatggcagc 282
>ref|XR_004053.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC672066), mRNA Length = 836 Score = 46.1 bits (23), Expect = 0.19 Identities = 68/83 (81%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || | |||||| || || Sbjct: 91 aactacaagcagcttcggaaaggagccaatgaagccaccaaaacccccaacagaggcatc 150 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 151 tctgagttcattgtgatggcagc 173
>ref|XM_001003565.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC667539), mRNA Length = 897 Score = 46.1 bits (23), Expect = 0.19 Identities = 68/83 (81%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || | |||||| || || Sbjct: 91 aactacaagcagcttcggaaaggagccaatgaagccaccaaaacccccaacagaggcatc 150 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 151 tctgagttcattgtgatggcagc 173
>ref|XM_910204.2| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC633304), mRNA Length = 897 Score = 46.1 bits (23), Expect = 0.19 Identities = 68/83 (81%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || | |||||| || || Sbjct: 91 aactacaagcagcttcggaaaggagccaatgaagccaccaaaacccccaacagaggcatc 150 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 151 tctgagttcattgtgatggcagc 173
>ref|XM_970157.1| PREDICTED: Tribolium castaneum similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC664143), mRNA Length = 405 Score = 46.1 bits (23), Expect = 0.19 Identities = 68/83 (81%) Strand = Plus / Plus Query: 330 gacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtgga 389 |||||||||||||||||||| || |||| || || || || || ||||| |||||||| Sbjct: 241 gacaagaatgtgccgtatgttttcgtccgctcgaaacaggcactggggcgcgcttgtggc 300 Query: 390 gtgactaggccggtcattgcttg 412 || | ||| ||||||||||||| Sbjct: 301 gtctcaaggtcggtcattgcttg 323
>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence Length = 180931 Score = 46.1 bits (23), Expect = 0.19 Identities = 68/83 (81%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || | |||||| || || Sbjct: 63982 aactacaagcagcttcggaaaggagccaatgaagccaccaaaacccccaacagaggcatc 64041 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 64042 tctgagttcattgtgatggcagc 64064
>ref|XM_815179.1| Trypanosoma cruzi strain CL Brener ribosomal protein S6 (Tc00.1047053508277.120) partial mRNA Length = 381 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 327 gaggacaagaatgtgccgtatgtctttgtcccttc 361 ||||||||||| ||||||||||| ||||| ||||| Sbjct: 217 gaggacaagaacgtgccgtatgtttttgtgccttc 251
>ref|XM_799370.1| Trypanosoma cruzi strain CL Brener ribosomal protein S6 (Tc00.1047053509943.30) partial mRNA Length = 381 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 327 gaggacaagaatgtgccgtatgtctttgtcccttc 361 ||||||||||| ||||||||||| ||||| ||||| Sbjct: 217 gaggacaagaacgtgccgtatgtttttgtgccttc 251
>emb|BX000992.5| Human DNA sequence from clone RP11-431P13 on chromosome X, complete sequence Length = 46289 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Minus Query: 89 acaaactcgtcaagggaagatga 111 ||||||||||||||||||||||| Sbjct: 18490 acaaactcgtcaagggaagatga 18468
>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34 Length = 196107 Score = 46.1 bits (23), Expect = 0.19 Identities = 38/43 (88%) Strand = Plus / Plus Query: 334 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgg 376 |||||||||||||||| ||||| || || || ||||||||||| Sbjct: 126175 agaatgtgccgtatgtgtttgtgccatcgaaacaagcccttgg 126217
>emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome 4, BAC clone T1P17 (ESSA project) Length = 137519 Score = 46.1 bits (23), Expect = 0.19 Identities = 38/43 (88%) Strand = Plus / Plus Query: 334 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgg 376 |||||||||||||||| ||||| || || || ||||||||||| Sbjct: 121643 agaatgtgccgtatgtgtttgtgccatcgaaacaagcccttgg 121685
>emb|BX284624.4| Mouse DNA sequence from clone RP23-299A2 on chromosome 2, complete sequence Length = 209836 Score = 46.1 bits (23), Expect = 0.19 Identities = 68/83 (81%) Strand = Plus / Minus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || | |||||| || || Sbjct: 188909 aactacaagcagcttcggaaaggagccaatgaagccaccaaaacccccaacagaggcatc 188850 Query: 258 tcggagttcgtggtgatggcagc 280 || |||||| | ||||||||||| Sbjct: 188849 tctgagttcattgtgatggcagc 188827
>emb|AL133273.5| Human DNA sequence from clone RP11-518F7 on chromosome Xq26.3-27.3, complete sequence Length = 42375 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 89 acaaactcgtcaagggaagatga 111 ||||||||||||||||||||||| Sbjct: 25900 acaaactcgtcaagggaagatga 25922
>ref|NM_001048604.1| Oryza sativa (japonica cultivar-group) Os01g0156300 (Os01g0156300) mRNA, partial cds Length = 837 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 cgcggcggccgcctcctcctcg 75 |||||||||||||||||||||| Sbjct: 210 cgcggcggccgcctcctcctcg 189
>ref|XM_515161.2| PREDICTED: Pan troglodytes similar to nuclear protein-NHP2-like protein (LOC458869), mRNA Length = 1831 Score = 44.1 bits (22), Expect = 0.73 Identities = 115/146 (78%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 523 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 582 Query: 258 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 317 || |||||| | |||||||| || ||| | ||||| || || ||| | || ||||||||| Sbjct: 583 tctgagttcatcgtgatggctgcagacgccgagccactggagatcattctgcacctcccg 642 Query: 318 ttgctcgcggaggacaagaatgtgcc 343 |||| || |||||||||||||| Sbjct: 643 ctgctgtgtgaagacaagaatgtgcc 668
>ref|XM_001005500.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC626361), mRNA Length = 1229 Score = 44.1 bits (22), Expect = 0.73 Identities = 67/82 (81%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 156 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 215 Query: 258 tcggagttcgtggtgatggcag 279 || |||||| | ||||| |||| Sbjct: 216 tctgagttcattgtgatagcag 237
>ref|XM_904370.2| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC630757), mRNA Length = 1228 Score = 44.1 bits (22), Expect = 0.73 Identities = 67/82 (81%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 156 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 215 Query: 258 tcggagttcgtggtgatggcag 279 || |||||| | ||||| |||| Sbjct: 216 tctgagttcattgtgatagcag 237
>ref|XM_973339.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC630757), mRNA Length = 1228 Score = 44.1 bits (22), Expect = 0.73 Identities = 67/82 (81%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 156 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 215 Query: 258 tcggagttcgtggtgatggcag 279 || |||||| | ||||| |||| Sbjct: 216 tctgagttcattgtgatagcag 237
>gb|DQ214255.1| Taeniopygia guttata clone 0061P0016A06 NHP2 non-histone chromosome protein 2-like 1-like mRNA, complete sequence Length = 1118 Score = 44.1 bits (22), Expect = 0.73 Identities = 124/158 (78%) Strand = Plus / Plus Query: 216 aagggagccaacgaagcgaccaagactctcaacaggggaatatcggagttcgtggtgatg 275 ||||||||||| ||||| ||||| || || ||||| || ||| | |||||| | |||||| Sbjct: 139 aagggagccaatgaagccaccaaaacactgaacagagggatagcagagttcattgtgatg 198 Query: 276 gcagctgacacggagccgctcgaaatcctcctccacctcccgttgctcgcggaggacaag 335 ||||| || ||||||| | || ||| |||| |||||||| | ||| ||||||||| Sbjct: 199 gcagcagatgcggagcccttggagatcatcctgcacctccctcttctctgcgaggacaag 258 Query: 336 aatgtgccgtatgtctttgtcccttcaaagcaagccct 373 || || || ||||| ||||| | || ||||||||||| Sbjct: 259 aacgtaccctatgtgtttgtgcgctccaagcaagccct 296
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.73 Identities = 25/26 (96%) Strand = Plus / Plus Query: 125 caaccccaaggcctacccgctggcgg 150 ||||||||||||||||||| |||||| Sbjct: 1496556 caaccccaaggcctacccggtggcgg 1496581
>gb|AC124909.3| Equus caballus clone CH241-91H15, complete sequence Length = 171421 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Minus Query: 598 tatattttgcaagactgttatg 619 |||||||||||||||||||||| Sbjct: 32552 tatattttgcaagactgttatg 32531
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 cgcggcggccgcctcctcctcg 75 |||||||||||||||||||||| Sbjct: 129254 cgcggcggccgcctcctcctcg 129233
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 cgcggcggccgcctcctcctcg 75 |||||||||||||||||||||| Sbjct: 3013542 cgcggcggccgcctcctcctcg 3013563
>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete sequence Length = 135594 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 cgcggcggccgcctcctcctcg 75 |||||||||||||||||||||| Sbjct: 12928 cgcggcggccgcctcctcctcg 12907
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 cgcggcggccgcctcctcctcg 75 |||||||||||||||||||||| Sbjct: 95059 cgcggcggccgcctcctcctcg 95080
>dbj|AK107993.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-F10, full insert sequence Length = 837 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 cgcggcggccgcctcctcctcg 75 |||||||||||||||||||||| Sbjct: 210 cgcggcggccgcctcctcctcg 189
>ref|XM_317299.2| Anopheles gambiae str. PEST ENSANGP00000010500 (ENSANGG00000008011), partial mRNA Length = 384 Score = 44.1 bits (22), Expect = 0.73 Identities = 79/98 (80%) Strand = Plus / Plus Query: 258 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 317 ||||||||| | |||||||| || || |||||||| |||||||| | || || || ||| Sbjct: 148 tcggagttcatcgtgatggcggcggatgcggagccgatcgaaatcattctgcatcttccg 207 Query: 318 ttgctcgcggaggacaagaatgtgccgtatgtctttgt 355 |||| |||||||||||||||||||| || ||||| Sbjct: 208 ctgctgtgcgaggacaagaatgtgccgtacgtgtttgt 245
>emb|CR556713.11| Zebrafish DNA sequence from clone DKEY-28O14 in linkage group 11, complete sequence Length = 229692 Score = 44.1 bits (22), Expect = 0.73 Identities = 22/22 (100%) Strand = Plus / Minus Query: 523 ctcgtgtgacacagtttttcag 544 |||||||||||||||||||||| Sbjct: 101757 ctcgtgtgacacagtttttcag 101736
>emb|CT030166.8| Mouse DNA sequence from clone RP23-320I11 on chromosome 13, complete sequence Length = 222942 Score = 44.1 bits (22), Expect = 0.73 Identities = 67/82 (81%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 257 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 176731 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 176790 Query: 258 tcggagttcgtggtgatggcag 279 || |||||| | ||||| |||| Sbjct: 176791 tctgagttcattgtgatagcag 176812
>gb|BC126414.1| Homo sapiens Sp3 transcription factor, mRNA (cDNA clone MGC:161692 IMAGE:8992130), complete cds Length = 3289 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gcggcggccgcctcctcctcg 75 ||||||||||||||||||||| Sbjct: 304 gcggcggccgcctcctcctcg 284
>ref|XM_515917.2| PREDICTED: Pan troglodytes Sp3 transcription factor (SP3), mRNA Length = 6076 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gcggcggccgcctcctcctcg 75 ||||||||||||||||||||| Sbjct: 509 gcggcggccgcctcctcctcg 489
>ref|XM_001088331.1| PREDICTED: Macaca mulatta Sp3 transcription factor (SP3), mRNA Length = 6156 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gcggcggccgcctcctcctcg 75 ||||||||||||||||||||| Sbjct: 578 gcggcggccgcctcctcctcg 558
>ref|XM_976843.1| PREDICTED: Mus musculus hypothetical LOC544888 (LOC544888), mRNA Length = 1406 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 tcgtggtgatggcagctgaca 285 ||||||||||||||||||||| Sbjct: 171 tcgtggtgatggcagctgaca 191
>ref|XM_909635.2| PREDICTED: Mus musculus hypothetical LOC544888 (LOC544888), mRNA Length = 1406 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 tcgtggtgatggcagctgaca 285 ||||||||||||||||||||| Sbjct: 171 tcgtggtgatggcagctgaca 191
>ref|XM_619025.3| PREDICTED: Mus musculus hypothetical LOC544888 (LOC544888), mRNA Length = 1406 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 tcgtggtgatggcagctgaca 285 ||||||||||||||||||||| Sbjct: 171 tcgtggtgatggcagctgaca 191
>gb|AY070137.1| Homo sapiens specificity protein 3 (SP3) mRNA, complete cds Length = 3979 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gcggcggccgcctcctcctcg 75 ||||||||||||||||||||| Sbjct: 431 gcggcggccgcctcctcctcg 411
>gb|DQ119665.1| Chlamydomonas reinhardtii central apparatus associated protein C1a-34 mRNA, complete cds Length = 921 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ccgcggcggccgcctcctcct 73 ||||||||||||||||||||| Sbjct: 601 ccgcggcggccgcctcctcct 581
>gb|AY441957.1| Homo sapiens transcription factor SP3 large isoform (SP3) mRNA, complete cds Length = 4286 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gcggcggccgcctcctcctcg 75 ||||||||||||||||||||| Sbjct: 782 gcggcggccgcctcctcctcg 762
>ref|XM_540837.2| PREDICTED: Canis familiaris similar to phosphofurin acidic cluster sorting protein 1 (LOC483716), mRNA Length = 3231 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 gcggcggccgcctcctcctcg 75 ||||||||||||||||||||| Sbjct: 128 gcggcggccgcctcctcctcg 148
>gb|DQ014842.1| Uncultured bacterium clone M1_d03_3 16S ribosomal RNA gene, partial sequence Length = 1341 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 gacatcgtccagcaggccgcc 197 ||||||||||||||||||||| Sbjct: 713 gacatcgtccagcaggccgcc 693
>gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome 12, complete sequence Length = 202807 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 tcgtggtgatggcagctgaca 285 ||||||||||||||||||||| Sbjct: 126648 tcgtggtgatggcagctgaca 126668
>ref|NM_001019023.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC607.03c), partial mRNA Length = 378 Score = 42.1 bits (21), Expect = 2.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 327 gaggacaagaatgtgccgtatgtctttgt 355 ||||||||||||||||| ||||| ||||| Sbjct: 211 gaggacaagaatgtgccttatgtttttgt 239
>emb|AL135751.1|SPAC607 S.pombe chromosome I cosmid c607 Length = 19559 Score = 42.1 bits (21), Expect = 2.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 327 gaggacaagaatgtgccgtatgtctttgt 355 ||||||||||||||||| ||||| ||||| Sbjct: 3111 gaggacaagaatgtgccttatgtttttgt 3083
>emb|AJ310752.1|HSA310752 Homo sapiens partial mRNA for transcription factor SP3 (SP3 gene) Length = 300 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gcggcggccgcctcctcctcg 75 ||||||||||||||||||||| Sbjct: 215 gcggcggccgcctcctcctcg 195
>gb|AY950656.1| Acanthamoeba castellanii snu13p-like mRNA, complete cds Length = 619 Score = 42.1 bits (21), Expect = 2.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 183 gtccagcaggccgccaactacaagcagct 211 ||||||||||| |||||||||||||||| Sbjct: 199 gtccagcaggcgaccaactacaagcagct 227
>gb|M97191.2|HUMSP3A Homo sapiens Sp3 protein mRNA, partial cds Length = 2217 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gcggcggccgcctcctcctcg 75 ||||||||||||||||||||| Sbjct: 42 gcggcggccgcctcctcctcg 22
>gb|AC016737.8| Homo sapiens BAC clone RP11-394I13 from 2, complete sequence Length = 196085 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 gcggcggccgcctcctcctcg 75 ||||||||||||||||||||| Sbjct: 28085 gcggcggccgcctcctcctcg 28105
>gb|AC007970.3| Homo sapiens BAC clone RP11-485G2 from 2, complete sequence Length = 138890 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 697 ttgaattttctccctggactc 717 ||||||||||||||||||||| Sbjct: 29839 ttgaattttctccctggactc 29819
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 175 tcgacatcgtccagcaggccgccaa 199 ||||||||| ||||||||||||||| Sbjct: 1971206 tcgacatcgcccagcaggccgccaa 1971230
>gb|AF087136.1|AF087136 Schizosaccharomyces pombe SNU13 snRNP subunit homolog (snu13) gene, complete cds Length = 725 Score = 42.1 bits (21), Expect = 2.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 327 gaggacaagaatgtgccgtatgtctttgt 355 ||||||||||||||||| ||||| ||||| Sbjct: 414 gaggacaagaatgtgccttatgtttttgt 442
>ref|NM_003111.3| Homo sapiens Sp3 transcription factor (SP3), transcript variant 1, mRNA Length = 3920 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gcggcggccgcctcctcctcg 75 ||||||||||||||||||||| Sbjct: 415 gcggcggccgcctcctcctcg 395
>ref|NM_001017371.3| Homo sapiens Sp3 transcription factor (SP3), transcript variant 2, mRNA Length = 3980 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gcggcggccgcctcctcctcg 75 ||||||||||||||||||||| Sbjct: 431 gcggcggccgcctcctcctcg 411
>gb|U95114.1|MMU95114 Mus musculus fertilization antigen-1 mRNA, complete cds Length = 642 Score = 42.1 bits (21), Expect = 2.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 198 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacag 250 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| Sbjct: 172 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacag 224
>gb|AF494280.1| Homo sapiens GC-binding transcription factor Sp3 gene, partial cds Length = 9596 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gcggcggccgcctcctcctcg 75 ||||||||||||||||||||| Sbjct: 1914 gcggcggccgcctcctcctcg 1894 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 128,890,244 Number of extensions: 7083502 Number of successful extensions: 153731 Number of sequences better than 10.0: 148 Number of HSP's gapped: 153686 Number of HSP's successfully gapped: 182 Length of query: 771 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 749 Effective length of database: 18,508,616,841 Effective search space: 13862954013909 Effective search space used: 13862954013909 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)