ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf93a05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103359:Os06g0112000 | 46 | 5e-05 | 2 | AK106734:Os03g0396200 | 33 | 0.34 | 3 | Os09g0520300:Os09g0520300 | 33 | 0.44 | 4 | AK098945:Os05g0467300 | 32 | 0.57 | 5 | AK061873:Os05g0467300 | 32 | 0.57 | 6 | AK111053:Os06g0579400 | 32 | 0.75 | 7 | AK061098:Os12g0555400 | 32 | 0.75 | 8 | Os08g0364100:Os08g0364100 | 32 | 0.75 | 9 | AK103555:Os01g0818100 | 32 | 0.98 | 10 | AK101869:Os02g0782200 | 32 | 0.98 | 11 | AK070439:Os02g0782200 | 32 | 0.98 | 12 | Os03g0241800:Os03g0241800 | 31 | 1.3 | 13 | Os09g0250200:Os09g0250200 | 31 | 1.7 | 14 | AK073103:Os07g0295400 | 30 | 2.2 | 15 | AK060569:Os07g0295400 | 30 | 2.2 | 16 | AK105287:Os12g0511300 | 29 | 4.8 | 17 | AK099580:Os02g0704000 | 29 | 4.9 | 18 | AK064824:Os02g0704000 | 29 | 4.9 | 19 | AK107394:Os03g0736000 | 29 | 6.4 | 20 | AK073504:Os07g0681600 | 29 | 6.4 | 21 | Os05g0545600:Os05g0545600 | 28 | 8.3 | 22 | AK103165:Os07g0596000 | 28 | 8.3 | 23 | AK065600:Os07g0596000 | 28 | 8.3 |
|---|
>AK103359:Os06g0112000 | Length = 734 Score = 45.8 bits (107), Expect = 5e-05 Identities = 42/151 (27%), Positives = 58/151 (38%), Gaps = 20/151 (13%) Frame = -2 Query: 816 DHHTGLRSTTPNLGLPGSIVAFFHVFSSMSVQPRPPHIHLAPQTLVGVRSCHGTRCPRPD 637 DHH LR+ LP ++ AF +MS PP + L + C Sbjct: 26 DHHARLRAAAARSDLPAALAAFV----AMSSAGAPPVLRTFTSLL---KLCAARGDLATG 78 Query: 636 HRAETRISGHGNDAGENRKT-----YA-----GDTLMVFENM----------LIVRYMRN 517 +++ G D+ T YA D VF+ M L+ Y RN Sbjct: 79 RAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARN 138 Query: 516 SLTSAALAMVFRMHDMDGIPPDSVMFASVLP 424 L A+ MV RM + +G PDS+ SVLP Sbjct: 139 GLARMAMEMVVRMQEEEGERPDSITLVSVLP 169
>AK106734:Os03g0396200 | Length = 435 Score = 33.1 bits (74), Expect = 0.34 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -2 Query: 546 NMLIVRYMRNSLTSAALAMVFRMHDMDGIPPDSVMFASVLP 424 N LI YM+N L S A+ + M +G+ P F SVLP Sbjct: 320 NTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLP 360
>Os09g0520300:Os09g0520300 | Length = 657 Score = 32.7 bits (73), Expect = 0.44 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = -2 Query: 573 AGDTLMVFENMLIVRYMRNSLTSAALAMVFRMHDMDGIPPDSVMFASVL 427 A +T ++ +I + RNSLTS ALA +M + I PD F +VL Sbjct: 328 APETNIISWTAMIGGFARNSLTSEALAHFVKMLTQEYIQPDDFTFGAVL 376
>AK098945:Os05g0467300 | Length = 257 Score = 32.3 bits (72), Expect = 0.57 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +1 Query: 412 PQAPGQHGRKHDGVRWYPVHIMHPKHHCQGRTSETVPHVPHNEHILEHH 558 P P H H +P H HP HH PH PH+ H HH Sbjct: 43 PHPPHHHPPHHP----HPPHHPHPPHH---------PHPPHHPHPPHHH 78
>AK061873:Os05g0467300 | Length = 257 Score = 32.3 bits (72), Expect = 0.57 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +1 Query: 412 PQAPGQHGRKHDGVRWYPVHIMHPKHHCQGRTSETVPHVPHNEHILEHH 558 P P H H +P H HP HH PH PH+ H HH Sbjct: 43 PHPPHHHPPHHP----HPPHHPHPPHH---------PHPPHHPHPPHHH 78
>AK111053:Os06g0579400 | Length = 94 Score = 32.0 bits (71), Expect = 0.75 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +3 Query: 720 VGQTWRRRHGRMRRS-IPAGPNSGSWISGPCGGRRREG 830 V WRR GR RR P P G+ G CGGRR+ G Sbjct: 25 VASAWRRGGGRARRDKAPLRPTVGA---GWCGGRRKHG 59
>AK061098:Os12g0555400 | Length = 198 Score = 32.0 bits (71), Expect = 0.75 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Frame = -3 Query: 581 KRTPA----THSWCSRICSLCGT*GTVSLVRPWQWCFGCMIWTGYHLTPSC 441 +R+PA T S R + T T + RPW+ C G + W+G TP C Sbjct: 147 ERSPAPCALTTSTPLRRSPMMATATTAGMGRPWRTCNGRVSWSGCRATPYC 197
>Os08g0364100:Os08g0364100 | Length = 344 Score = 32.0 bits (71), Expect = 0.75 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -1 Query: 664 PWDTMPTPRSPCRDPHKWSWQRRWRKPENVRRR 566 P +P P C H+WSWQRR + RRR Sbjct: 314 PLQRLPPPAGTCS--HRWSWQRRRHRFPQCRRR 344
>AK103555:Os01g0818100 | Length = 208 Score = 31.6 bits (70), Expect = 0.98 Identities = 33/119 (27%), Positives = 47/119 (39%) Frame = -2 Query: 846 TAPSSSPPGGDHHTGLRSTTPNLGLPGSIVAFFHVFSSMSVQPRPPHIHLAPQTLVGVRS 667 T P SPPG ++ P L P S +FF P+ P PQT + V Sbjct: 51 TRPGQSPPGSNYSYQPTMVPPILPHPTSNPSFF--------TPQYPTRGPVPQTYINVP- 101 Query: 666 CHGTRCPRPDHRAETRISGHGNDAGENRKTYAGDTLMVFENMLIVRYMRNSLTSAALAM 490 PR + T G G AG A T++ EN+L + + L A+L++ Sbjct: 102 ------PRMGGQNSTPNFGMGLGAG----ALAAGTMIFGENLLSGQSLNTGLDGASLSI 150
>AK101869:Os02g0782200 | Length = 622 Score = 31.6 bits (70), Expect = 0.98 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -2 Query: 849 FTAPSSSPPGGDHHTGLRSTTPNLGLPGSIVAFFHVFSSMSVQP 718 F+ S S PGG HH+GL + +L +P +F ++MS P Sbjct: 28 FSGQSGSVPGGFHHSGLHNMHGSLNMPNMPGSFSQRNAAMSGLP 71
>AK070439:Os02g0782200 | Length = 499 Score = 31.6 bits (70), Expect = 0.98 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -2 Query: 849 FTAPSSSPPGGDHHTGLRSTTPNLGLPGSIVAFFHVFSSMSVQP 718 F+ S S PGG HH+GL + +L +P +F ++MS P Sbjct: 28 FSGQSGSVPGGFHHSGLHNMHGSLNMPNMPGSFSQRNAAMSGLP 71
>Os03g0241800:Os03g0241800 | Length = 760 Score = 31.2 bits (69), Expect = 1.3 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -2 Query: 546 NMLIVRYMRNSLTSAALAMVFRMHDMDGIPPDSVMFASVLP 424 N ++ Y N + A+ + RM DGI PD+V A+VLP Sbjct: 261 NAMLAVYTNNEMHVEAVELFMRMQK-DGIEPDAVTLATVLP 300
>Os09g0250200:Os09g0250200 | Length = 270 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 Query: 622 GLCTVIWAWASCPMARPHADQSLRSEVNVGRTGLDRHGGE 741 G+C +WA + RPHA +S E+ G +R GGE Sbjct: 89 GVCVCVWAGGGVGIGRPHA-RSTGEEMGERGRGRERGGGE 127
>AK073103:Os07g0295400 | Length = 403 Score = 30.4 bits (67), Expect = 2.2 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Frame = -2 Query: 849 FTAPSSSPPGGDHHT----GLRSTTPNLGLPGSIVAFFHVFS--SMSVQPRP 712 F APSS+P G T G S+TP G P S AF FS + V P P Sbjct: 47 FGAPSSTPSFGTPSTAPAFGTPSSTPAFGAPSSTPAFGAPFSTPAFGVAPSP 98
>AK060569:Os07g0295400 | Length = 403 Score = 30.4 bits (67), Expect = 2.2 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Frame = -2 Query: 849 FTAPSSSPPGGDHHT----GLRSTTPNLGLPGSIVAFFHVFS--SMSVQPRP 712 F APSS+P G T G S+TP G P S AF FS + V P P Sbjct: 47 FGAPSSTPSFGTPSTAPAFGTPSSTPAFGAPSSTPAFGAPFSTPAFGVAPSP 98
>AK105287:Os12g0511300 | Length = 179 Score = 29.3 bits (64), Expect = 4.8 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 7/63 (11%) Frame = +3 Query: 666 KTARRPEFEERG-----ECGEDGVGQTWRRRHGRMRRSIPAGPNSGS--WISGPCGGRRR 824 K +++P+ +RG G G +RRR R +PAG + G W + CG RR Sbjct: 77 KRSQKPQATKRGIGSGPRTGGGSTGDRFRRR----RLVLPAGAHRGPWWWRTAGCGSRRG 132 Query: 825 EGM 833 G+ Sbjct: 133 GGV 135
>AK099580:Os02g0704000 | Length = 638 Score = 29.3 bits (64), Expect = 4.9 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 11/68 (16%) Frame = +1 Query: 451 VRWYPV---HIMHPKHHCQGRTSETV----PHVPHNEHILEH----HECVAGVRFPVFAS 597 +RW+ V +IMH + + E + P+V EH LEH H CV VR + Sbjct: 434 MRWFEVPGFNIMHSVNAWEEAGGEELVLVAPNVLSIEHALEHMELVHSCVEKVRINLRTG 493 Query: 598 VVAMTTYA 621 VV T A Sbjct: 494 VVTRTPLA 501
>AK064824:Os02g0704000 | Length = 638 Score = 29.3 bits (64), Expect = 4.9 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 11/68 (16%) Frame = +1 Query: 451 VRWYPV---HIMHPKHHCQGRTSETV----PHVPHNEHILEH----HECVAGVRFPVFAS 597 +RW+ V +IMH + + E + P+V EH LEH H CV VR + Sbjct: 434 MRWFEVPGFNIMHSVNAWEEAGGEELVLVAPNVLSIEHALEHMELVHSCVEKVRINLRTG 493 Query: 598 VVAMTTYA 621 VV T A Sbjct: 494 VVTRTPLA 501
>AK107394:Os03g0736000 | Length = 365 Score = 28.9 bits (63), Expect = 6.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 Query: 849 FTAPSSSPPGGDHHTGLRSTTPNLGLP 769 F+ S S PG HH+GL + N LP Sbjct: 28 FSGQSGSVPGAFHHSGLHNIHANFNLP 54
>AK073504:Os07g0681600 | Length = 886 Score = 28.9 bits (63), Expect = 6.4 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = -2 Query: 471 MDGIPPDSVMFASVLPRRLGSAHLCCWHYWDK 376 ++ IP + LPR LG A C W W K Sbjct: 629 VESIPAAPKPTQNNLPRSLGGAKFCSWELWQK 660
>Os05g0545600:Os05g0545600 | Length = 804 Score = 28.5 bits (62), Expect = 8.3 Identities = 17/55 (30%), Positives = 23/55 (41%) Frame = +3 Query: 642 GVGIVSHGKTARRPEFEERGECGEDGVGQTWRRRHGRMRRSIPAGPNSGSWISGP 806 G G V G+TARR G C R + G+ RR +P ++GP Sbjct: 36 GAGGVGDGETARRRVAPAGGCCLLTPAAGAGRLQQGKGRRKLPLATGRDGAVAGP 90
>AK103165:Os07g0596000 | Length = 428 Score = 28.5 bits (62), Expect = 8.3 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +1 Query: 664 ARPHADQSLRSEVNVGRTGLDRHGGEDMEE 753 ARPH D SL+ + LD HG E + E Sbjct: 270 ARPHNDFSLKPVAKISADALDSHGSELVPE 299
>AK065600:Os07g0596000 | Length = 428 Score = 28.5 bits (62), Expect = 8.3 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +1 Query: 664 ARPHADQSLRSEVNVGRTGLDRHGGEDMEE 753 ARPH D SL+ + LD HG E + E Sbjct: 270 ARPHNDFSLKPVAKISADALDSHGSELVPE 299 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 36,269,986 Number of extensions: 992752 Number of successful extensions: 3291 Number of sequences better than 10.0: 23 Number of HSP's gapped: 3279 Number of HSP's successfully gapped: 23 Length of query: 351 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 249 Effective length of database: 11,315,673 Effective search space: 2817602577 Effective search space used: 2817602577 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
