ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf93a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P03181:YHL1_EBV Hypothetical protein BHLF1 - Epstein-Barr virus ... 38 0.080
2O88778:BSN_RAT Protein bassoon - Rattus norvegicus (Rat) 32 4.4
3Q8KA51:PTGA_BUCAP Glucose-specific phosphotransferase enzyme IIA... 32 5.7
4Q9WYU4:PDXS_THEMA Pyridoxal biosynthesis lyase pdxS - Thermotoga... 31 7.5
5P32798:COT1_YEAST Cobalt uptake protein COT1 - Saccharomyces cer... 31 7.5
6Q9NVM4:ANM7_HUMAN Protein arginine N-methyltransferase 7 - Homo ... 31 9.7
7Q7KSD8:ADA2A_DROME Transcriptional adapter 2A - Drosophila melan... 31 9.8

>P03181:YHL1_EBV Hypothetical protein BHLF1 - Epstein-Barr virus (strain B95-8)|
           (HHV-4) (Human herpesvirus 4)
          Length = 660
 Score = 37.7 bits (86), Expect = 0.080
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +3

Query: 639 LGVGIVSHGKTARRPE--FEERGECGEDGVGQTWRRRHGRMRRSIPAGPNSGSWISGPCG 812
           LG G    G    RP   F+ +      G  +TWRRR G  R   P  P +G   SGP G
Sbjct: 126 LGEGSAGLGSRGPRPHPAFQVQWSARNPGCPRTWRRRSGAQRGHPP--PGAGQRPSGPTG 183

Query: 813 GR 818
           GR
Sbjct: 184 GR 185



 Score = 33.9 bits (76), Expect = 1.1
 Identities = 22/51 (43%), Positives = 25/51 (49%)
 Frame = +3

Query: 666 KTARRPEFEERGECGEDGVGQTWRRRHGRMRRSIPAGPNSGSWISGPCGGR 818
           +T RRP    R      G  +TWRRR G  R   P  P +G   SGP GGR
Sbjct: 263 RTHRRPPGCPRS-ARNPGCPRTWRRRSGAQRGHPP--PGAGQRPSGPTGGR 310



 Score = 33.9 bits (76), Expect = 1.1
 Identities = 22/51 (43%), Positives = 25/51 (49%)
 Frame = +3

Query: 666 KTARRPEFEERGECGEDGVGQTWRRRHGRMRRSIPAGPNSGSWISGPCGGR 818
           +T RRP    R      G  +TWRRR G  R   P  P +G   SGP GGR
Sbjct: 388 RTHRRPPGCPRS-ARNPGCPRTWRRRSGAQRGHPP--PGAGQRPSGPTGGR 435



 Score = 33.9 bits (76), Expect = 1.1
 Identities = 22/51 (43%), Positives = 25/51 (49%)
 Frame = +3

Query: 666 KTARRPEFEERGECGEDGVGQTWRRRHGRMRRSIPAGPNSGSWISGPCGGR 818
           +T RRP    R      G  +TWRRR G  R   P  P +G   SGP GGR
Sbjct: 513 RTHRRPPGCPRS-ARNPGCPRTWRRRSGAQRGHPP--PGAGQRPSGPTGGR 560



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>O88778:BSN_RAT Protein bassoon - Rattus norvegicus (Rat)|
          Length = 3938

 Score = 32.0 bits (71), Expect = 4.4
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = -3

Query: 584 GKRTPATHSWCS----RICSLCGT*GTVSLVRPWQW-CFGC 477
           G R PA ++ C+    R+C+LCG   T  LV   +W C  C
Sbjct: 472 GSRGPANYNTCTACKLRVCTLCGFNPTPHLVEKTEWLCLNC 512



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>Q8KA51:PTGA_BUCAP Glucose-specific phosphotransferase enzyme IIA component - Buchnera|
           aphidicola subsp. Schizaphis graminum
          Length = 167

 Score = 31.6 bits (70), Expect = 5.7
 Identities = 25/114 (21%), Positives = 47/114 (41%)
 Frame = -2

Query: 807 TGLRSTTPNLGLPGSIVAFFHVFSSMSVQPRPPHIHLAPQTLVGVRSCHGTRCPRPDHRA 628
           TG +   P  G  G I+   H FS +S +     +H    T+                  
Sbjct: 54  TGNKILAPINGTIGKILNSMHAFSIISEEGVELFVHFGIDTV------------------ 95

Query: 627 ETRISGHGNDAGENRKTYAGDTLMVFENMLIVRYMRNSLTSAALAMVFRMHDMD 466
           + R  G    A +N+K   GDT+++F+  L+    R+ LT   ++ + +  +++
Sbjct: 96  KLRGEGFKQIAQDNQKVKIGDTIILFDLNLLKEKARSILTPVVISNIEKFKNIE 149



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>Q9WYU4:PDXS_THEMA Pyridoxal biosynthesis lyase pdxS - Thermotoga maritima|
          Length = 293

 Score = 31.2 bits (69), Expect = 7.5
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -2

Query: 537 IVRYMRNSLTSAALAMVFRMHDMDGIPPDSVMFASVLPRRLGSAHLCCWHYWDKP 373
           +V +    + + A A +  M   DG+   S +F S  PR++  A +    YWD P
Sbjct: 208 VVNFAAGGVATPADAALMMMLGADGVFVGSGIFKSKDPRKMAKAMVLAVTYWDNP 262



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>P32798:COT1_YEAST Cobalt uptake protein COT1 - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 439

 Score = 31.2 bits (69), Expect = 7.5
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = -1

Query: 244 YSSQLPRTHIYENTHAQTQHNPRKNFHVDRVHTTIPTDTT---SSLAPSHPLGSYHNSAT 74
           +   +P +H +  THA          HVD +  T P D+T   S + P+  + S+ N  T
Sbjct: 155 HEMHMPSSHTH--THA----------HVDGIENTTPMDSTDNISEIMPNAIVDSFMNENT 202

Query: 73  HRLSHERLPNTRSFS 29
             L+ E    T S+S
Sbjct: 203 RLLTPENASKTPSYS 217



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>Q9NVM4:ANM7_HUMAN Protein arginine N-methyltransferase 7 - Homo sapiens (Human)|
          Length = 692

 Score = 30.8 bits (68), Expect = 9.7
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -3

Query: 521 GTVSLVRPWQWCFGCMIWTGYHLTPSC 441
           GTV L RP Q     ++W  YHLTP C
Sbjct: 598 GTVELRRPGQ-SHAAVLWMEYHLTPEC 623



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>Q7KSD8:ADA2A_DROME Transcriptional adapter 2A - Drosophila melanogaster (Fruit fly)|
          Length = 562

 Score = 30.8 bits (68), Expect = 9.8
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = -2

Query: 555 VFENMLIVRYMRNSLTSAALAMVFRMHDMDGIPPDSVMFASVLPRRLGSAHLCCWHYWDK 376
           +FE +L +++ R+S     +  VF+M  +D  PP     AS +  RL + + C    +D 
Sbjct: 202 IFERLLNLKHARDSYVPERMPYVFKMRSLD--PPRHDDIAS-MQFRLSAGYRCARGDFDT 258

Query: 375 PIDDKRREAL 346
           P D      L
Sbjct: 259 PYDTSAESLL 268


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 215,630,572
Number of extensions: 5497246
Number of successful extensions: 15054
Number of sequences better than 10.0: 7
Number of HSP's gapped: 15021
Number of HSP's successfully gapped: 10
Length of query: 351
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 237
Effective length of database: 69,416,809
Effective search space: 16451783733
Effective search space used: 16451783733
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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