>P03181:YHL1_EBV Hypothetical protein BHLF1 - Epstein-Barr virus (strain B95-8)|
(HHV-4) (Human herpesvirus 4)
Length = 660
Score = 37.7 bits (86), Expect = 0.080
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 639 LGVGIVSHGKTARRPE--FEERGECGEDGVGQTWRRRHGRMRRSIPAGPNSGSWISGPCG 812
LG G G RP F+ + G +TWRRR G R P P +G SGP G
Sbjct: 126 LGEGSAGLGSRGPRPHPAFQVQWSARNPGCPRTWRRRSGAQRGHPP--PGAGQRPSGPTG 183
Query: 813 GR 818
GR
Sbjct: 184 GR 185
Score = 33.9 bits (76), Expect = 1.1
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = +3
Query: 666 KTARRPEFEERGECGEDGVGQTWRRRHGRMRRSIPAGPNSGSWISGPCGGR 818
+T RRP R G +TWRRR G R P P +G SGP GGR
Sbjct: 263 RTHRRPPGCPRS-ARNPGCPRTWRRRSGAQRGHPP--PGAGQRPSGPTGGR 310
Score = 33.9 bits (76), Expect = 1.1
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = +3
Query: 666 KTARRPEFEERGECGEDGVGQTWRRRHGRMRRSIPAGPNSGSWISGPCGGR 818
+T RRP R G +TWRRR G R P P +G SGP GGR
Sbjct: 388 RTHRRPPGCPRS-ARNPGCPRTWRRRSGAQRGHPP--PGAGQRPSGPTGGR 435
Score = 33.9 bits (76), Expect = 1.1
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = +3
Query: 666 KTARRPEFEERGECGEDGVGQTWRRRHGRMRRSIPAGPNSGSWISGPCGGR 818
+T RRP R G +TWRRR G R P P +G SGP GGR
Sbjct: 513 RTHRRPPGCPRS-ARNPGCPRTWRRRSGAQRGHPP--PGAGQRPSGPTGGR 560
>Q7KSD8:ADA2A_DROME Transcriptional adapter 2A - Drosophila melanogaster (Fruit fly)|
Length = 562
Score = 30.8 bits (68), Expect = 9.8
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = -2
Query: 555 VFENMLIVRYMRNSLTSAALAMVFRMHDMDGIPPDSVMFASVLPRRLGSAHLCCWHYWDK 376
+FE +L +++ R+S + VF+M +D PP AS + RL + + C +D
Sbjct: 202 IFERLLNLKHARDSYVPERMPYVFKMRSLD--PPRHDDIAS-MQFRLSAGYRCARGDFDT 258
Query: 375 PIDDKRREAL 346
P D L
Sbjct: 259 PYDTSAESLL 268
Database: uniprot_sprot.fasta.out
Posted date: Jul 19, 2007 5:58 PM
Number of letters in database: 100,686,439
Number of sequences in database: 274,295
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 215,630,572
Number of extensions: 5497246
Number of successful extensions: 15054
Number of sequences better than 10.0: 7
Number of HSP's gapped: 15021
Number of HSP's successfully gapped: 10
Length of query: 351
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 237
Effective length of database: 69,416,809
Effective search space: 16451783733
Effective search space used: 16451783733
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)