ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf89m14 |
|---|---|
| Clone Library Name | barley_pub |
>Q8BL97:SFRS7_MOUSE Splicing factor, arginine/serine-rich 7 - Mus musculus (Mouse)| Length = 267 Score = 95.9 bits (237), Expect = 3e-19 Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 7/108 (6%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK- 261 +VYVGNL A E+E F +G L++VW+AR PPGFAF++F++ RDA+DA+R LDGK Sbjct: 41 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKV 100 Query: 262 ---NGWRVELST---KXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 + RVELST + + +CYECGE GH+A +C Sbjct: 101 ICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 148
>Q16629:SFRS7_HUMAN Splicing factor, arginine/serine-rich 7 - Homo sapiens (Human)| Length = 238 Score = 95.9 bits (237), Expect = 3e-19 Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 7/108 (6%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK- 261 +VYVGNL A E+E F +G L++VW+AR PPGFAF++F++ RDA+DA+R LDGK Sbjct: 12 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKV 71 Query: 262 ---NGWRVELST---KXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 + RVELST + + +CYECGE GH+A +C Sbjct: 72 ICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>Q3T106:SFRS7_BOVIN Splicing factor, arginine/serine-rich 7 - Bos taurus (Bovine)| Length = 235 Score = 95.9 bits (237), Expect = 3e-19 Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 7/108 (6%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK- 261 +VYVGNL A E+E F +G L++VW+AR PPGFAF++F++ RDA+DA+R LDGK Sbjct: 12 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKV 71 Query: 262 ---NGWRVELST---KXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 + RVELST + + +CYECGE GH+A +C Sbjct: 72 ICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>Q18409:RSP6_CAEEL Probable splicing factor, arginine/serine-rich 6 - Caenorhabditis| elegans Length = 179 Score = 82.0 bits (201), Expect = 4e-15 Identities = 40/73 (54%), Positives = 54/73 (73%), Gaps = 4/73 (5%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK 261 A+VYVG L AT++E+E+ F FG ++ VWVAR+PPGFAF+++D+ RDA+DA+R LDG Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62 Query: 262 N----GWRVELST 288 RVELST Sbjct: 63 RICGVRARVELST 75
>P84104:SFRS3_MOUSE Splicing factor, arginine/serine-rich 3 - Mus musculus (Mouse)| Length = 164 Score = 78.6 bits (192), Expect = 5e-14 Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 4/71 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGKN 264 +VYVGNL E+E F +G L+SVWVAR PPGFAF++F++ RDA DA+RELDG+ Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70 Query: 265 ----GWRVELS 285 RVELS Sbjct: 71 LCGCRVRVELS 81
>P84103:SFRS3_HUMAN Splicing factor, arginine/serine-rich 3 - Homo sapiens (Human)| Length = 164 Score = 78.6 bits (192), Expect = 5e-14 Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 4/71 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGKN 264 +VYVGNL E+E F +G L+SVWVAR PPGFAF++F++ RDA DA+RELDG+ Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70 Query: 265 ----GWRVELS 285 RVELS Sbjct: 71 LCGCRVRVELS 81
>Q3SZR8:SFRS3_BOVIN Splicing factor, arginine/serine-rich 3 - Bos taurus (Bovine)| Length = 164 Score = 78.6 bits (192), Expect = 5e-14 Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 4/71 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGKN 264 +VYVGNL E+E F +G L+SVWVAR PPGFAF++F++ RDA DA+RELDG+ Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70 Query: 265 ----GWRVELS 285 RVELS Sbjct: 71 LCGCRVRVELS 81
>Q02427:RBP1_DROME RNA-binding protein 1 - Drosophila melanogaster (Fruit fly)| Length = 144 Score = 76.3 bits (186), Expect = 2e-13 Identities = 34/58 (58%), Positives = 44/58 (75%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 +VYVGNL A+ EIE F +G L++VWVAR PPGFAF++F++ RDA+DA R LDG Sbjct: 12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDG 69
>Q24491:RX21_DROME RNA-binding protein Rsf1 - Drosophila melanogaster (Fruit fly)| Length = 197 Score = 62.0 bits (149), Expect = 5e-09 Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK- 261 RVYVGNL + ++E EF +G L SVW+A PPGFAF++F+ DA+ A L+G Sbjct: 8 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSE 67 Query: 262 ---NGWRVELS 285 + RVE+S Sbjct: 68 LLGSQLRVEIS 78
>Q23120:RSP2_CAEEL Probable splicing factor, arginine/serine-rich 2 - Caenorhabditis| elegans Length = 281 Score = 56.6 bits (135), Expect = 2e-07 Identities = 28/61 (45%), Positives = 39/61 (63%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 M RVY+G L RA+ R++E FR +G L V + GF F+DF + RDA DA+ +L+G Sbjct: 1 MVRVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKN---GFGFVDFQDQRDADDAVHDLNG 57 Query: 259 K 261 K Sbjct: 58 K 58
>Q23121:RSP1_CAEEL Probable splicing factor, arginine/serine-rich 1 - Caenorhabditis| elegans Length = 312 Score = 56.2 bits (134), Expect = 3e-07 Identities = 25/60 (41%), Positives = 41/60 (68%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK 261 AR+Y+G L R + ++IE FR +G ++ V + GF F++FD+ RDA+DA+ +L+GK Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
>O22315:SFRS1_ARATH Pre-mRNA-splicing factor SF2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 303 Score = 55.8 bits (133), Expect = 3e-07 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSV--WVARKPPGFAFIDFDETRDAKDAIRELDG 258 VYVGNL RE+ED F +G + + V +PPG+AF++FD+ RDA+DAI DG Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDG 67
>Q09167:SFRS5_RAT Splicing factor, arginine/serine-rich 5 - Rattus norvegicus (Rat)| Length = 269 Score = 54.3 bits (129), Expect = 1e-06 Identities = 24/59 (40%), Positives = 41/59 (69%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK 261 RV++G L+P A +++E F+ +G ++ + + R GF F++F++ RDA DA+ ELDGK Sbjct: 5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPRDADDAVYELDGK 60
>O35326:SFRS5_MOUSE Splicing factor, arginine/serine-rich 5 - Mus musculus (Mouse)| Length = 270 Score = 54.3 bits (129), Expect = 1e-06 Identities = 24/59 (40%), Positives = 41/59 (69%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK 261 RV++G L+P A +++E F+ +G ++ + + R GF F++F++ RDA DA+ ELDGK Sbjct: 5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPRDADDAVYELDGK 60
>Q13243:SFRS5_HUMAN Splicing factor, arginine/serine-rich 5 - Homo sapiens (Human)| Length = 272 Score = 54.3 bits (129), Expect = 1e-06 Identities = 24/59 (40%), Positives = 41/59 (69%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK 261 RV++G L+P A +++E F+ +G ++ + + R GF F++F++ RDA DA+ ELDGK Sbjct: 5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPRDADDAVYELDGK 60
>Q94901:LARK_DROME RNA-binding protein lark - Drosophila melanogaster (Fruit fly)| Length = 352 Score = 54.3 bits (129), Expect = 1e-06 Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 4/105 (3%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK- 261 +++VGNL + A E+ + F+ +G + + R + F+ D D +DAI+EL+G+ Sbjct: 87 KIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRN---YGFVHLDCVGDVQDAIKELNGRV 143 Query: 262 ---NGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 +V++ST +CY CG SGH+++EC Sbjct: 144 VDGQPLKVQVSTSRVRPKPGMGDPE-----QCYRCGRSGHWSKEC 183 Score = 33.5 bits (75), Expect = 1.7 Identities = 15/58 (25%), Positives = 31/58 (53%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 ++++GNLD + A E+ F +G + V + + F+ + + +DAI+ L+G Sbjct: 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVVK---NYGFVHMETEQQGRDAIQNLNG 62
>Q9NEW6:RSP3_CAEEL Probable splicing factor, arginine/serine-rich 3 - Caenorhabditis| elegans Length = 258 Score = 53.9 bits (128), Expect = 1e-06 Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 1/59 (1%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV-ARKPPGFAFIDFDETRDAKDAIRELDG 258 +VYVGNL +E+ED F +G +K V + + + P FAF++F++ RDA+DA+R DG Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 68
>Q6DII2:SFRS1_XENTR Splicing factor, arginine/serine-rich 1 - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 267 Score = 53.5 bits (127), Expect = 2e-06 Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV--ARKPPGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL P ++IED F +G ++ + + R P FAF++F++ RDA+DA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 259 --KNGWRVEL 282 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q5R7H2:SFRS1_PONPY Splicing factor, arginine/serine-rich 1 - Pongo pygmaeus| (Orangutan) Length = 248 Score = 53.5 bits (127), Expect = 2e-06 Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV--ARKPPGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL P ++IED F +G ++ + + R P FAF++F++ RDA+DA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 259 --KNGWRVEL 282 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q3YLA6:SFRS1_PIG Splicing factor, arginine/serine-rich 1 - Sus scrofa (Pig)| Length = 248 Score = 53.5 bits (127), Expect = 2e-06 Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV--ARKPPGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL P ++IED F +G ++ + + R P FAF++F++ RDA+DA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 259 --KNGWRVEL 282 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q6PDM2:SFRS1_MOUSE Splicing factor, arginine/serine-rich 1 - Mus musculus (Mouse)| Length = 248 Score = 53.5 bits (127), Expect = 2e-06 Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV--ARKPPGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL P ++IED F +G ++ + + R P FAF++F++ RDA+DA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 259 --KNGWRVEL 282 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q07955:SFRS1_HUMAN Splicing factor, arginine/serine-rich 1 - Homo sapiens (Human)| Length = 248 Score = 53.5 bits (127), Expect = 2e-06 Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV--ARKPPGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL P ++IED F +G ++ + + R P FAF++F++ RDA+DA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 259 --KNGWRVEL 282 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q5ZML3:SFRS1_CHICK Splicing factor, arginine/serine-rich 1 - Gallus gallus (Chicken)| Length = 257 Score = 53.5 bits (127), Expect = 2e-06 Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV--ARKPPGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL P ++IED F +G ++ + + R P FAF++F++ RDA+DA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 259 --KNGWRVEL 282 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q0VCY7:SFRS1_BOVIN Splicing factor, arginine/serine-rich 1 - Bos taurus (Bovine)| Length = 248 Score = 53.5 bits (127), Expect = 2e-06 Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV--ARKPPGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL P ++IED F +G ++ + + R P FAF++F++ RDA+DA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 259 --KNGWRVEL 282 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q7SXP4:SF1L1_DANRE Splicing factor, arginine/serine-rich 1-like protein 1 - Danio| rerio (Zebrafish) (Brachydanio rerio) Length = 245 Score = 53.5 bits (127), Expect = 2e-06 Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV--ARKPPGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL P +++ED F +G ++ + + R P FAF++F++ RDA+DA+ DG Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDG 75 Query: 259 --KNGWRVEL 282 +G+R+ + Sbjct: 76 YDYDGYRLRV 85
>Q6NYA0:SFRS1_DANRE Splicing factor, arginine/serine-rich 1 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 245 Score = 53.1 bits (126), Expect = 2e-06 Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV--ARKPPGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL P +++ED F +G ++ + + R P FAF++F++ RDA+DA+ DG Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 75 Query: 259 --KNGWRVEL 282 +G+R+ + Sbjct: 76 YDYDGYRLRV 85
>Q8VE97:SFRS4_MOUSE Splicing factor, arginine/serine-rich 4 - Mus musculus (Mouse)| Length = 489 Score = 51.2 bits (121), Expect = 8e-06 Identities = 25/62 (40%), Positives = 40/62 (64%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 M RVY+G L +A R++E F+ +G + V + G+ F++FD+ RDA DA+ EL+G Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57 Query: 259 KN 264 K+ Sbjct: 58 KD 59
>Q08170:SFRS4_HUMAN Splicing factor, arginine/serine-rich 4 - Homo sapiens (Human)| Length = 494 Score = 51.2 bits (121), Expect = 8e-06 Identities = 25/62 (40%), Positives = 40/62 (64%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 M RVY+G L +A R++E F+ +G + V + G+ F++FD+ RDA DA+ EL+G Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57 Query: 259 KN 264 K+ Sbjct: 58 KD 59
>Q4R979:RBM4_MACFA RNA-binding protein 4 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 364 Score = 50.1 bits (118), Expect = 2e-05 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD--- 255 +++VGN+ P T +E+ +F +G + + + +AF+ + DA +AIR LD Sbjct: 79 KLHVGNISPTCTNKELRAKFEEYGPVIECDIVKD---YAFVHMERAEDAVEAIRGLDNTE 135 Query: 256 --GKNGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 GK V+LST CY CG+ GH+++EC Sbjct: 136 FQGKR-MHVQLSTSRLRTAPGMGDQSG-----CYRCGKEGHWSKEC 175
>Q9BWF3:RBM4_HUMAN RNA-binding protein 4 - Homo sapiens (Human)| Length = 364 Score = 50.1 bits (118), Expect = 2e-05 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD--- 255 +++VGN+ P T +E+ +F +G + + + +AF+ + DA +AIR LD Sbjct: 79 KLHVGNISPTCTNKELRAKFEEYGPVIECDIVKD---YAFVHMERAEDAVEAIRGLDNTE 135 Query: 256 --GKNGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 GK V+LST CY CG+ GH+++EC Sbjct: 136 FQGKR-MHVQLSTSRLRTAPGMGDQSG-----CYRCGKEGHWSKEC 175
>Q3MHX3:RBM4_BOVIN RNA-binding protein 4 - Bos taurus (Bovine)| Length = 362 Score = 50.1 bits (118), Expect = 2e-05 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD--- 255 +++VGN+ P T +E+ +F +G + + + +AF+ + DA +AIR LD Sbjct: 79 KLHVGNISPTCTNKELRAKFEEYGPVIECDIVKD---YAFVHMERAEDAVEAIRGLDNTE 135 Query: 256 --GKNGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 GK V+LST CY CG+ GH+++EC Sbjct: 136 FQGKR-MHVQLSTSRLRTAPGMGDQSG-----CYRCGKEGHWSKEC 175
>Q10021:RSP5_CAEEL Probable splicing factor, arginine/serine-rich 5 - Caenorhabditis| elegans Length = 208 Score = 49.7 bits (117), Expect = 2e-05 Identities = 23/61 (37%), Positives = 40/61 (65%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 M R+Y+G + A R++E + +G + ++ + GFAF+DF+++RDA+DA +LDG Sbjct: 1 MPRLYLGKIPYNARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDACHDLDG 57 Query: 259 K 261 K Sbjct: 58 K 58
>Q9BDY9:RBM4_RABIT RNA-binding protein 4 - Oryctolagus cuniculus (Rabbit)| Length = 359 Score = 49.7 bits (117), Expect = 2e-05 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD--- 255 +++VGN+ P T +E+ +F +G + + + +AF+ + DA +AIR LD Sbjct: 79 KLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD---YAFVHMERAEDAVEAIRGLDNTE 135 Query: 256 --GKNGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 GK V+LST CY CG+ GH+++EC Sbjct: 136 FQGKR-MHVQLSTSRLRTAPGMGDQSG-----CYRCGKEGHWSKEC 175
>Q8C7Q4:RBM4_MOUSE RNA-binding protein 4 - Mus musculus (Mouse)| Length = 361 Score = 49.7 bits (117), Expect = 2e-05 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD--- 255 +++VGN+ P T +E+ +F +G + + + +AF+ + DA +AIR LD Sbjct: 79 KLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD---YAFVHMERAEDAVEAIRGLDNTE 135 Query: 256 --GKNGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 GK V+LST CY CG+ GH+++EC Sbjct: 136 FQGKR-MHVQLSTSRLRTAPGMGDQSG-----CYRCGKEGHWSKEC 175
>Q64LC9:RBM4B_RAT RNA-binding protein 4B - Rattus norvegicus (Rat)| Length = 357 Score = 49.7 bits (117), Expect = 2e-05 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD--- 255 +++VGN+ P T +E+ +F +G + + + +AF+ + DA +AIR LD Sbjct: 79 KLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD---YAFVHMERAEDAVEAIRGLDNTE 135 Query: 256 --GKNGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 GK V+LST CY CG+ GH+++EC Sbjct: 136 FQGKR-MHVQLSTSRLRTAPGMGDQSG-----CYRCGKEGHWSKEC 175
>Q06AT9:RBM4B_PIG RNA-binding protein 4B - Sus scrofa (Pig)| Length = 359 Score = 49.7 bits (117), Expect = 2e-05 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD--- 255 +++VGN+ P T +E+ +F +G + + + +AF+ + DA +AIR LD Sbjct: 79 KLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD---YAFVHMERAEDAVEAIRGLDNTE 135 Query: 256 --GKNGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 GK V+LST CY CG+ GH+++EC Sbjct: 136 FQGKR-MHVQLSTSRLRTAPGMGDQSG-----CYRCGKEGHWSKEC 175
>Q8VE92:RBM4B_MOUSE RNA-binding protein 4B - Mus musculus (Mouse)| Length = 357 Score = 49.7 bits (117), Expect = 2e-05 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD--- 255 +++VGN+ P T +E+ +F +G + + + +AF+ + DA +AIR LD Sbjct: 79 KLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD---YAFVHMERAEDAVEAIRGLDNTE 135 Query: 256 --GKNGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 GK V+LST CY CG+ GH+++EC Sbjct: 136 FQGKR-MHVQLSTSRLRTAPGMGDQSG-----CYRCGKEGHWSKEC 175
>Q9BQ04:RBM4B_HUMAN RNA-binding protein 4B - Homo sapiens (Human)| Length = 359 Score = 49.7 bits (117), Expect = 2e-05 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD--- 255 +++VGN+ P T +E+ +F +G + + + +AF+ + DA +AIR LD Sbjct: 79 KLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD---YAFVHMERAEDAVEAIRGLDNTE 135 Query: 256 --GKNGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 GK V+LST CY CG+ GH+++EC Sbjct: 136 FQGKR-MHVQLSTSRLRTAPGMGDQSG-----CYRCGKEGHWSKEC 175
>Q01484:ANK2_HUMAN Ankyrin-2 - Homo sapiens (Human)| Length = 3924 Score = 46.2 bits (108), Expect = 3e-04 Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 1/100 (1%) Frame = +3 Query: 519 PTGSVSQEAKLQQITTASPRAEHHQVSAACPRT-KHQQVTTACPWAKHQQVTTAYPCTKH 695 P S S +++ + SP+ E H ++ +T +H V+ + KH V+ + +H Sbjct: 1774 PAASPSLKSERHAPGSPSPKTERHSTLSSSAKTERHPPVSPSSKTEKHSPVSPSAKTERH 1833 Query: 696 QQVTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVT 815 +S+S +KH V+ ++ ++H V++T + ++H V+ Sbjct: 1834 SPASSSSKTEKHSPVSPSTKTERHSPVSSTKT-ERHPPVS 1872 Score = 46.2 bits (108), Expect = 3e-04 Identities = 21/88 (23%), Positives = 49/88 (55%), Gaps = 3/88 (3%) Frame = +3 Query: 567 ASP--RAEHHQVSAACPRT-KHQQVTTACPWAKHQQVTTAYPCTKHQQVTSASSRQKHQQ 737 ASP ++E H + P+T +H ++++ +H V+ + KH V+ ++ ++H Sbjct: 1776 ASPSLKSERHAPGSPSPKTERHSTLSSSAKTERHPPVSPSSKTEKHSPVSPSAKTERHSP 1835 Query: 738 VTTASSCQKHQQVTTTSSCQKHEQVTTT 821 +++S +KH V+ ++ ++H V++T Sbjct: 1836 ASSSSKTEKHSPVSPSTKTERHSPVSST 1863 Score = 38.9 bits (89), Expect = 0.041 Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Frame = +3 Query: 576 RAEHHQVSAACPRTKHQQVTTACPWAK---HQQVTTAYPCTKHQQVTSASSRQKHQQVTT 746 + H AA P K ++ P K H ++++ +H V+ +S +KH V+ Sbjct: 1767 KTTHRPHPAASPSLKSERHAPGSPSPKTERHSTLSSSAKTERHPPVSPSSKTEKHSPVSP 1826 Query: 747 ASSCQKHQQVTTTSSCQKHEQVT 815 ++ ++H +++S +KH V+ Sbjct: 1827 SAKTERHSPASSSSKTEKHSPVS 1849 Score = 37.4 bits (85), Expect = 0.12 Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Frame = +3 Query: 528 SVSQEAKLQQITTASPRAE---HHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQ 698 ++S AK ++ SP ++ H VS + +H +++ KH V+ + +H Sbjct: 1799 TLSSSAKTERHPPVSPSSKTEKHSPVSPSAKTERHSPASSSSKTEKHSPVSPSTKTERHS 1858 Query: 699 QVTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVT 815 V+S + ++H V+ + K V+ + +KH V+ Sbjct: 1859 PVSSTKT-ERHPPVSPSGKTDKRPPVSPSGRTEKHPPVS 1896 Score = 34.7 bits (78), Expect = 0.78 Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Frame = +3 Query: 612 RTKHQQVTTACPWAKHQQVTTAYPCTK---HQQVTSASSRQKHQQVTTASSCQKHQQVTT 782 +T H+ A P K ++ P K H ++S++ ++H V+ +S +KH V+ Sbjct: 1767 KTTHRPHPAASPSLKSERHAPGSPSPKTERHSTLSSSAKTERHPPVSPSSKTEKHSPVSP 1826 Query: 783 TSSCQKHEQVTTT 821 ++ ++H +++ Sbjct: 1827 SAKTERHSPASSS 1839 Score = 34.3 bits (77), Expect = 1.0 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 13/109 (11%) Frame = +3 Query: 534 SQEAKLQQITTASP--RAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQVT 707 S +K ++ + SP + E H ++ +H V+ + K V+ + KH V+ Sbjct: 1837 SSSSKTEKHSPVSPSTKTERHSPVSSTKTERHPPVSPSGKTDKRPPVSPSGRTEKHPPVS 1896 Query: 708 ----------SASSR-QKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTT 821 S S R KHQ V+TA +KH V+ + +K V+ T Sbjct: 1897 PGRTEKRLPVSPSGRTDKHQPVSTAGKTEKHLPVSPSGKTEKQPPVSPT 1945 Score = 31.2 bits (69), Expect = 8.6 Identities = 23/97 (23%), Positives = 39/97 (40%) Frame = +3 Query: 510 ELQPTGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCT 689 E P S S + + + S R E H + K V+ + KHQ V+TA Sbjct: 1866 ERHPPVSPSGKTDKRPPVSPSGRTEKHPPVSPGRTEKRLPVSPSGRTDKHQPVSTAGKTE 1925 Query: 690 KHQQVTSASSRQKHQQVTTASSCQKHQQVTTTSSCQK 800 KH V+ + +K V+ S ++ ++ + K Sbjct: 1926 KHLPVSPSGKTEKQPPVSPTSKTERIEETMSVRELMK 1962
>P26686:SRR55_DROME Serine-arginine protein 55 - Drosophila melanogaster (Fruit fly)| Length = 376 Score = 46.2 bits (108), Expect = 3e-04 Identities = 23/62 (37%), Positives = 38/62 (61%) Frame = +1 Query: 76 VMARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD 255 V +RVYVG L R++E F+ +G + + + G+ F++F++ RDA DA+ EL+ Sbjct: 2 VGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELN 58 Query: 256 GK 261 GK Sbjct: 59 GK 60
>Q13247:SFRS6_HUMAN Splicing factor, arginine/serine-rich 6 - Homo sapiens (Human)| Length = 344 Score = 45.4 bits (106), Expect = 4e-04 Identities = 23/61 (37%), Positives = 37/61 (60%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 M RVY+G L ++I+ F +G L V + G+ F++F+++RDA DA+ EL+G Sbjct: 1 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSRDADDAVYELNG 57 Query: 259 K 261 K Sbjct: 58 K 58
>Q6IQ97:RBM4_DANRE RNA-binding protein 4 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 419 Score = 45.4 bits (106), Expect = 4e-04 Identities = 25/103 (24%), Positives = 48/103 (46%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGKN 264 +++VGN+ T +E+ +F +G + + + +AF+ + DA +AI LD Sbjct: 79 KLHVGNISSSCTNQELRAKFEEYGPVVECDIVKD---YAFVHMERVEDAMEAISGLDN-T 134 Query: 265 GWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFARECRL 393 ++ +L + CY CG+ GH+++EC L Sbjct: 135 AFQGKLMSVKLSTSRLRTAPGMGERTGCYRCGQEGHWSKECPL 177
>Q3B7L6:SFRS6_BOVIN Splicing factor, arginine/serine-rich 6 - Bos taurus (Bovine)| Length = 345 Score = 45.1 bits (105), Expect = 6e-04 Identities = 22/61 (36%), Positives = 37/61 (60%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 M RVY+G L ++I+ F +G L + + G+ F++F+++RDA DA+ EL+G Sbjct: 1 MPRVYIGRLSYNVREKDIQRFFSGYGRLLGIDLKN---GYGFVEFEDSRDADDAVYELNG 57 Query: 259 K 261 K Sbjct: 58 K 58
>P04930:HRP_PLAFF Small histidine-alanine-rich protein precursor - Plasmodium| falciparum (isolate FC27 / Papua New Guinea) Length = 221 Score = 43.9 bits (102), Expect = 0.001 Identities = 28/103 (27%), Positives = 35/103 (33%) Frame = +2 Query: 560 HHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAG 739 HH A AH A+ HH A+ HH H A+ H A A+ Sbjct: 58 HHAHHVADAHHAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANA 117 Query: 740 HHRLLVPEASAGHHHLLVPEA*ASHHHLLVNRAIAGPLHSHPS 868 HH A+ HH A +HH N LH + S Sbjct: 118 HHAANAHHAANAHHAANAHHAANAHHAADANHGFHFNLHDNNS 160 Score = 40.8 bits (94), Expect = 0.011 Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 2/83 (2%) Frame = +2 Query: 575 ARGASPGLRRLPAHEASAG--HHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAGHHR 748 A+G + R L +A AG HH V +A HH H A+ H A A+ HH Sbjct: 37 AKGLNSNKRLLHESQAHAGDAHHAHHVADAHHAHHAANAHHAANAHHAANAHHAANAHHA 96 Query: 749 LLVPEASAGHHHLLVPEA*ASHH 817 A+ HH A +HH Sbjct: 97 ANAHHAANAHHAANAHHAANAHH 119
>Q9R0U0:FUSIP_MOUSE FUS-interacting serine-arginine-rich protein 1 - Mus musculus| (Mouse) Length = 262 Score = 43.9 bits (102), Expect = 0.001 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 5/63 (7%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 ++V N+ + ++ EF +G + V+V R+P GFA++ F++ RDA+DA+ L Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNL 71 Query: 253 DGK 261 D K Sbjct: 72 DRK 74
>O75494:FUSIP_HUMAN FUS-interacting serine-arginine-rich protein 1 - Homo sapiens| (Human) Length = 262 Score = 43.9 bits (102), Expect = 0.001 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 5/63 (7%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 ++V N+ + ++ EF +G + V+V R+P GFA++ F++ RDA+DA+ L Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNL 71 Query: 253 DGK 261 D K Sbjct: 72 DRK 74
>P05228:HRP2_PLAFA Histidine-rich protein precursor - Plasmodium falciparum| Length = 241 Score = 43.5 bits (101), Expect = 0.002 Identities = 30/105 (28%), Positives = 38/105 (36%) Frame = +2 Query: 554 ADHHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEAS 733 AD H A A+ AH A+ HH A+ HH H A+ H A A+ Sbjct: 73 ADAHH--AHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAA 130 Query: 734 AGHHRLLVPEASAGHHHLLVPEA*ASHHHLLVNRAIAGPLHSHPS 868 HH A+ HH A +HH N LH + S Sbjct: 131 NAHHAANAHHAANAHHAANAHHAANAHHAADANHGFHFNLHDNNS 175 Score = 41.2 bits (95), Expect = 0.008 Identities = 25/86 (29%), Positives = 31/86 (36%) Frame = +2 Query: 560 HHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAG 739 HH A A AH A+ HH A+ HH H A+ H A A+ Sbjct: 61 HHVADAHHAHHVADAHHAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANA 120 Query: 740 HHRLLVPEASAGHHHLLVPEA*ASHH 817 HH A+ HH A +HH Sbjct: 121 HHAANAHHAANAHHAANAHHAANAHH 146 Score = 41.2 bits (95), Expect = 0.008 Identities = 24/86 (27%), Positives = 30/86 (34%) Frame = +2 Query: 560 HHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAG 739 HH A AH A+ HH A+ HH H A+ H A A+ Sbjct: 67 HHAHHVADAHHAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANA 126 Query: 740 HHRLLVPEASAGHHHLLVPEA*ASHH 817 HH A+ HH A +HH Sbjct: 127 HHAANAHHAANAHHAANAHHAANAHH 152 Score = 39.7 bits (91), Expect = 0.024 Identities = 21/69 (30%), Positives = 27/69 (39%) Frame = +2 Query: 611 AHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAGHHRLLVPEASAGHHHLL 790 AH + HH V +A HH H A+ H A A+ HH A+ HH Sbjct: 60 AHHVADAHHAHHVADAHHAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAAN 119 Query: 791 VPEA*ASHH 817 A +HH Sbjct: 120 AHHAANAHH 128 Score = 35.4 bits (80), Expect = 0.46 Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Frame = +2 Query: 575 ARGASPGLRRLPAHEASAG--HHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAGHHR 748 A+G + R L +A AG HH V +A HH H A H A A+ HH Sbjct: 37 AKGLNSNKRLLHESQAHAGDAHHAHHVADAHHAHHVADAHHA---HHAANAHHAANAHHA 93 Query: 749 LLVPEASAGHHHLLVPEA*ASHH 817 A+ HH A +HH Sbjct: 94 ANAHHAANAHHAANAHHAANAHH 116
>P05227:HRP1_PLAFA Histidine-rich protein precursor - Plasmodium falciparum| Length = 332 Score = 43.1 bits (100), Expect = 0.002 Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 1/96 (1%) Frame = +2 Query: 560 HHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAG 739 HH A A+ AH A+ HH A+ HH H A+ H A A+ Sbjct: 226 HHAADAHHATDAHHAADAHHAADAHHATDAHHAADAHHATDAHHAADAHHAADAHHATDS 285 Query: 740 HHRLLVPEA-SAGHHHLLVPEA*ASHHHLLVNRAIA 844 HH +A A HH A+HH + A A Sbjct: 286 HHAHHAADAHHAAAHHATDAHHAAAHHATDAHHAAA 321 Score = 41.6 bits (96), Expect = 0.006 Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 2/91 (2%) Frame = +2 Query: 551 TADHHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEA 730 T HH A A+ AH A+ HH A+ HH H A+ H A +A Sbjct: 235 TDAHHAADAHHAADAHHATDAHHAADAHHATDAHHAADAHHAADAHHATDSHHAHHAADA 294 Query: 731 --SAGHHRLLVPEASAGHHHLLVPEA*ASHH 817 +A HH A+A HH A+HH Sbjct: 295 HHAAAHHATDAHHAAA--HHATDAHHAAAHH 323 Score = 40.8 bits (94), Expect = 0.011 Identities = 26/86 (30%), Positives = 31/86 (36%) Frame = +2 Query: 560 HHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAG 739 HH A A+ AH A HH A+ HH H A+ H A A+ Sbjct: 205 HHAADAHHAADAHHATDAHHA---HHAADAHHATDAHHAADAHHAADAHHATDAHHAADA 261 Query: 740 HHRLLVPEASAGHHHLLVPEA*ASHH 817 HH A+ HH A SHH Sbjct: 262 HHATDAHHAADAHHAADAHHATDSHH 287 Score = 37.0 bits (84), Expect = 0.16 Identities = 28/101 (27%), Positives = 33/101 (32%) Frame = +2 Query: 560 HHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAG 739 HH A A AH A+ HH +A HH H A A AS Sbjct: 109 HHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAAYAHHAHHASDA 168 Query: 740 HHRLLVPEASAGHHHLLVPEA*ASHHHLLVNRAIAGPLHSH 862 HH A+ HH +A HH A H+H Sbjct: 169 HHAADAHHAAYAHHAHHAADA----HHAADAHHAAYAHHAH 205 Score = 35.0 bits (79), Expect = 0.60 Identities = 25/93 (26%), Positives = 32/93 (34%) Frame = +2 Query: 560 HHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAG 739 HH A A AH A+ HH +A HH H A A A+ Sbjct: 73 HHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADA 132 Query: 740 HHRLLVPEASAGHHHLLVPEA*ASHHHLLVNRA 838 HH +A HH +A +HH + A Sbjct: 133 HHAHHAADAHHAHH---AADAHHAHHAAYAHHA 162 Score = 34.3 bits (77), Expect = 1.0 Identities = 25/86 (29%), Positives = 29/86 (33%) Frame = +2 Query: 560 HHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAG 739 HH A A AH A+ HH +A HH H A A A+ Sbjct: 100 HHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAAYA 159 Query: 740 HHRLLVPEASAGHHHLLVPEA*ASHH 817 HH AS HH A +HH Sbjct: 160 HH---AHHASDAHHAADAHHAAYAHH 182 Score = 33.9 bits (76), Expect = 1.3 Identities = 25/86 (29%), Positives = 30/86 (34%) Frame = +2 Query: 560 HHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAG 739 HH A A+ AH A HH A+ HH H A H A A+ Sbjct: 184 HHAADAHHAADAHHAAYAHHA---HHAADAHHAADAHHATDAHHA---HHAADAHHATDA 237 Query: 740 HHRLLVPEASAGHHHLLVPEA*ASHH 817 HH A+ HH A +HH Sbjct: 238 HHAADAHHAADAHHATDAHHAADAHH 263 Score = 32.0 bits (71), Expect = 5.0 Identities = 20/69 (28%), Positives = 26/69 (37%) Frame = +2 Query: 611 AHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRLLAPEASAGHHRLLVPEASAGHHHLL 790 AH A+ HH +A HH H A A A+ HH +A HH Sbjct: 72 AHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHH--- 128 Query: 791 VPEA*ASHH 817 +A +HH Sbjct: 129 AADAHHAHH 137
>Q5PPI1:SFRS9_RAT Splicing factor, arginine/serine-rich 9 - Rattus norvegicus (Rat)| Length = 221 Score = 43.1 bits (100), Expect = 0.002 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKP--PGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL +++ED F +G ++ + + + FAF+ F++ RDA+DAI G Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---G 71 Query: 259 KNGW 270 +NG+ Sbjct: 72 RNGY 75
>Q9D0B0:SFRS9_MOUSE Splicing factor, arginine/serine-rich 9 - Mus musculus (Mouse)| Length = 222 Score = 43.1 bits (100), Expect = 0.002 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKP--PGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL +++ED F +G ++ + + + FAF+ F++ RDA+DAI G Sbjct: 16 RIYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---G 72 Query: 259 KNGW 270 +NG+ Sbjct: 73 RNGY 76
>Q13242:SFRS9_HUMAN Splicing factor, arginine/serine-rich 9 - Homo sapiens (Human)| Length = 221 Score = 43.1 bits (100), Expect = 0.002 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKP--PGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL +++ED F +G ++ + + + FAF+ F++ RDA+DAI G Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---G 71 Query: 259 KNGW 270 +NG+ Sbjct: 72 RNGY 75
>P78814:SRP2_SCHPO Pre-mRNA-splicing factor srp2 - Schizosaccharomyces pombe (Fission| yeast) Length = 365 Score = 42.4 bits (98), Expect = 0.004 Identities = 18/59 (30%), Positives = 35/59 (59%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK 261 R++VG + P+AT ++ D F+ +G + + GF F++ ++ RDA+D + + GK Sbjct: 5 RLFVGRIPPQATREDMMDFFKGYGQILDCKLMN---GFGFVEVEDARDARDIVNDFQGK 60
>P38159:HNRPG_HUMAN Heterogeneous nuclear ribonucleoprotein G - Homo sapiens (Human)| Length = 391 Score = 42.4 bits (98), Expect = 0.004 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 9/78 (11%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 ++++G L+ + +E F +G + V + + K GFAF+ F+ DAKDA R+ Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68 Query: 250 LDGKN----GWRVELSTK 291 ++GK+ +VE +TK Sbjct: 69 MNGKSLDGKAIKVEQATK 86
>Q5AJS6:MRD1_CANAL Multiple RNA-binding domain-containing protein 1 - Candida albicans| (Yeast) Length = 841 Score = 42.0 bits (97), Expect = 0.005 Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 4/63 (6%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARK----PPGFAFIDFDETRDAKDAIRE 249 +++ + NL AT +++ + F FG LKSV V +K GFAF++F+ ++A+ A+ + Sbjct: 717 SKIIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLMKEAETAMSQ 776 Query: 250 LDG 258 L+G Sbjct: 777 LEG 779
>Q8TBF4:ZCRB1_HUMAN Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Homo sapiens (Human) Length = 217 Score = 41.6 bits (96), Expect = 0.006 Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 VYV NL T ++ F +G + V + RK G AFI F + A++ R + Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRAI 71 Query: 253 DGKNGW----RVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 + K + + ++ KCYECGESGH + C Sbjct: 72 NNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYAC 120
>Q42404:RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa - Arabidopsis thaliana| (Mouse-ear cress) Length = 427 Score = 41.6 bits (96), Expect = 0.006 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 5/63 (7%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVA-----RKPPGFAFIDFDETRDAKDAIREL 252 ++V L+ ++ +I+ EF +G +K V + KP G+AFI++ TRD K A ++ Sbjct: 140 LFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQA 199 Query: 253 DGK 261 DG+ Sbjct: 200 DGQ 202
>P92966:RSP41_ARATH Arginine/serine-rich-splicing factor RSP41 - Arabidopsis thaliana| (Mouse-ear cress) Length = 356 Score = 41.6 bits (96), Expect = 0.006 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD- 255 M V+ GN + A ++E FR +G ++ V + GFAF+ ++ RDA+DAIR LD Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKA---GFAFVYMEDERDAEDAIRALDR 57 Query: 256 ---GKNGWRVEL 282 G+ G R+ + Sbjct: 58 FEYGRTGRRLRV 69
>P92965:RSP40_ARATH Arginine/serine-rich-splicing factor RSP40 - Arabidopsis thaliana| (Mouse-ear cress) Length = 350 Score = 41.2 bits (95), Expect = 0.008 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD- 255 M V+ GN + A ++E FR +G ++ V + GFAF+ ++ RDA+DAIR LD Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKA---GFAFVYMEDERDAEDAIRALDR 57 Query: 256 ---GKNGWRVEL 282 G+ G R+ + Sbjct: 58 FEFGRKGRRLRV 69
>O65001:TE1_MAIZE Protein terminal ear1 - Zea mays (Maize)| Length = 656 Score = 40.8 bits (94), Expect = 0.011 Identities = 19/51 (37%), Positives = 30/51 (58%) Frame = +1 Query: 109 PRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK 261 P + ++ F+ FG LK V + + P F+DF +TRDA A+ EL+G+ Sbjct: 219 PGVSVADLRQVFQAFGDLKDVRESAQRPSHKFVDFFDTRDAARALAELNGQ 269
>Q29RT0:HNRPG_BOVIN Heterogeneous nuclear ribonucleoprotein G - Bos taurus (Bovine)| Length = 396 Score = 40.8 bits (94), Expect = 0.011 Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 5/65 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 ++++G L+ + +E F +G + V + + K GFAFI F+ DAK A+R+ Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68 Query: 250 LDGKN 264 ++GK+ Sbjct: 69 MNGKS 73
>Q6DJI9:ZCRB1_XENLA Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Xenopus laevis (African clawed frog) Length = 218 Score = 40.4 bits (93), Expect = 0.014 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 9/109 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 VYV NL T ++ F +G + V + +RK G +F+ F + A++ +R L Sbjct: 12 VYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRKSKGVSFVLFLDKESAQNCVRGL 71 Query: 253 DGKNGW----RVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 + K + + ++ +CYECG++GH + C Sbjct: 72 NNKQLFGRAIKASIAKDNGRATEFIRRRNYTDKSRCYECGDTGHLSYAC 120
>Q499V6:ZCRB1_RAT Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Rattus norvegicus (Rat) Length = 217 Score = 40.4 bits (93), Expect = 0.014 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 9/109 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 VYV NL T ++ F +G + V + RK G AFI F + A + R + Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71 Query: 253 DGKNGW----RVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 + K + + ++ KCYECGESGH + C Sbjct: 72 NNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYAC 120
>Q9CZ96:ZCRB1_MOUSE Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Mus musculus (Mouse) Length = 217 Score = 40.4 bits (93), Expect = 0.014 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 9/109 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 VYV NL T ++ F +G + V + RK G AFI F + A + R + Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71 Query: 253 DGKNGW----RVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 + K + + ++ KCYECGESGH + C Sbjct: 72 NNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYAC 120
>Q56JZ7:ZCRB1_BOVIN Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Bos taurus (Bovine) Length = 217 Score = 40.4 bits (93), Expect = 0.014 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 VYV NL T ++ F +G + V + R+ G AFI F + A++ R + Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNCTRAI 71 Query: 253 DGKNGW----RVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 + K + + ++ KCYECGESGH + C Sbjct: 72 NNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYAC 120
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 40.4 bits (93), Expect = 0.014 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVAR----KPPGFAFIDFDETRDAKDAIRELD 255 VY+ NLD T +E D F FG + S+ + + KP GF F+++ A+ A+ EL+ Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELN 322 Query: 256 GK 261 K Sbjct: 323 DK 324 Score = 37.4 bits (85), Expect = 0.12 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVA----RKPPGFAFIDFDETRDAKDAIRELD 255 V++ NLDP + + D F FG + S VA G+ F+ FD A AI ++ Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVN 229 Query: 256 G 258 G Sbjct: 230 G 230 Score = 36.6 bits (83), Expect = 0.21 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSV-----WVARKPPGFAFIDFDETRDAKDAIR 246 A +YVG LDP T + + F G + S+ V R+ G+A+++F D + A+ Sbjct: 80 ASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALD 139 Query: 247 ELD 255 EL+ Sbjct: 140 ELN 142
>P84586:HNRPG_RAT Heterogeneous nuclear ribonucleoprotein G - Rattus norvegicus (Rat)| Length = 388 Score = 40.4 bits (93), Expect = 0.014 Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 9/78 (11%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 ++++G L+ + +E F +G + + + + K GFAF+ F+ DAKD R+ Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68 Query: 250 LDGKN----GWRVELSTK 291 ++GK+ +VE +TK Sbjct: 69 MNGKSLDGKAIKVEQATK 86
>Q24762:ZEST_DROVI Regulatory protein zeste - Drosophila virilis (Fruit fly)| Length = 618 Score = 40.0 bits (92), Expect = 0.019 Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 4/97 (4%) Frame = +3 Query: 531 VSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQVTS 710 + E K QQIT A +A+ HQ + A R Q A QQ HQQ S Sbjct: 356 IISEIKPQQITLAQYQAQQHQQAQARLRPGQAQQLAQQQLAAQQQQLAVAAAAAHQQQNS 415 Query: 711 ASSR----QKHQQVTTASSCQKHQQVTTTSSCQKHEQ 809 +S+ Q+HQQ Q+ QQ Q+ +Q Sbjct: 416 SSAAAVVVQQHQQQQQQQQHQQQQQQQQVQQQQQQQQ 452
>Q8WXF0:SRR35_HUMAN 35 kDa SR repressor protein - Homo sapiens (Human)| Length = 261 Score = 40.0 bits (92), Expect = 0.019 Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 5/63 (7%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 +++ N+ ++ EF +G + V++ R+P GFA++ F++ RDA+DA+ L Sbjct: 12 LFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNL 71 Query: 253 DGK 261 + K Sbjct: 72 NRK 74
>O75526:HNRGT_HUMAN Testis-specific heterogeneous nuclear ribonucleoprotein G-T - Homo| sapiens (Human) Length = 392 Score = 40.0 bits (92), Expect = 0.019 Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 5/65 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 ++++G L+ + +E EF +G + V + + K GFAF+ F+ DAK A R+ Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARD 68 Query: 250 LDGKN 264 ++GK+ Sbjct: 69 MNGKS 73
>P23023:DSX_DROME Protein doublesex - Drosophila melanogaster (Fruit fly)| Length = 549 Score = 39.7 bits (91), Expect = 0.024 Identities = 32/111 (28%), Positives = 38/111 (34%) Frame = +2 Query: 536 PGSEVTADHHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAGHLRL 715 P + HH A A + AH A GHH HH +H A Sbjct: 111 PAATTLLSHHHHVAAPAHVHAHHVHAHHAHGGHH---------SHHGHVLHHQQAAAAAA 161 Query: 716 LAPEASAGHHRLLVPEASAGHHHLLVPEA*ASHHHLLVNRAIAGPLHSHPS 868 AP A A H AS+ H H A A H H+ A + H H S Sbjct: 162 AAPSAPASHLGGSSTAASSIHGH-----AHAHHVHMAAAAAASVAQHQHQS 207
>Q66II8:RU17_XENTR U1 small nuclear ribonucleoprotein 70 kDa - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 471 Score = 39.7 bits (91), Expect = 0.024 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 5/63 (7%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 ++V ++ T ++ EF V+G +K + + + KP G+AFI+++ RD A + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 253 DGK 261 DGK Sbjct: 165 DGK 167
>Q62376:RU17_MOUSE U1 small nuclear ribonucleoprotein 70 kDa - Mus musculus (Mouse)| Length = 448 Score = 39.7 bits (91), Expect = 0.024 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 5/63 (7%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 ++V ++ T ++ EF V+G +K + + + KP G+AFI+++ RD A + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 253 DGK 261 DGK Sbjct: 165 DGK 167
>P08621:RU17_HUMAN U1 small nuclear ribonucleoprotein 70 kDa - Homo sapiens (Human)| Length = 437 Score = 39.7 bits (91), Expect = 0.024 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 5/63 (7%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 ++V ++ T ++ EF V+G +K + + + KP G+AFI+++ RD A + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 253 DGK 261 DGK Sbjct: 165 DGK 167
>Q1RMR2:RU17_BOVIN U1 small nuclear ribonucleoprotein 70 kDa - Bos taurus (Bovine)| Length = 439 Score = 39.7 bits (91), Expect = 0.024 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 5/63 (7%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 ++V ++ T ++ EF V+G +K + + + KP G+AFI+++ RD A + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 253 DGK 261 DGK Sbjct: 165 DGK 167
>P92964:RSP31_ARATH Arginine/serine-rich-splicing factor RSP31 - Arabidopsis thaliana| (Mouse-ear cress) Length = 264 Score = 39.7 bits (91), Expect = 0.024 Identities = 22/59 (37%), Positives = 35/59 (59%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD 255 M V+VGN + ++E F +G + V + G+AF+ F++ RDA+DAIR+LD Sbjct: 1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKS---GYAFVYFEDERDAEDAIRKLD 56
>Q44556:RBPD_ANASP Putative RNA-binding protein rbpD - Anabaena sp. (strain PCC 7120)| Length = 94 Score = 39.7 bits (91), Expect = 0.024 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 +YVGNL RAT +++ F +G +K V + + GFAF++ +E AI EL Sbjct: 3 IYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITEL 62 Query: 253 DG 258 DG Sbjct: 63 DG 64
>Q3ZCC5:RBM18_BOVIN Probable RNA-binding protein 18 - Bos taurus (Bovine)| Length = 190 Score = 39.7 bits (91), Expect = 0.024 Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 8/67 (11%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVL--------KSVWVARKPPGFAFIDFDETRDAKDA 240 R+++GNLDP+ T + + FG + KS + +P G+ F++F+ ++A+ A Sbjct: 26 RLWIGNLDPKITEYHLLRLLQKFGTVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85 Query: 241 IRELDGK 261 I+ L+GK Sbjct: 86 IQCLNGK 92
>P09406:RU17_XENLA U1 small nuclear ribonucleoprotein 70 kDa - Xenopus laevis (African| clawed frog) Length = 471 Score = 39.3 bits (90), Expect = 0.032 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 8/66 (12%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV--------ARKPPGFAFIDFDETRDAKDAI 243 ++V ++ T ++ EF V+G +K + + + KP G+AFI+++ RD A Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAY 164 Query: 244 RELDGK 261 + DGK Sbjct: 165 KHADGK 170
>Q8R3C6:RBM19_MOUSE Probable RNA-binding protein 19 - Mus musculus (Mouse)| Length = 952 Score = 39.3 bits (90), Expect = 0.032 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 6/63 (9%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPP------GFAFIDFDETRDAKDAI 243 +++ V N+ +A REI + F FG LK+V + +K GF F+DF +DAK A Sbjct: 824 SKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAF 883 Query: 244 REL 252 L Sbjct: 884 NAL 886 Score = 35.4 bits (80), Expect = 0.46 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVW-----VARKPPGFAFIDFDETRDAKDAIRE 249 R++V NL ++ ++E F +G L + + +KP GFAF+ F A A E Sbjct: 401 RLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 460 Query: 250 LDGK 261 +DG+ Sbjct: 461 VDGQ 464
>Q5R6W3:RBM18_PONPY Probable RNA-binding protein 18 - Pongo pygmaeus (Orangutan)| Length = 190 Score = 39.3 bits (90), Expect = 0.032 Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 8/67 (11%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVL--------KSVWVARKPPGFAFIDFDETRDAKDA 240 R+++GNLDP+ T + + FG + KS + +P G+ F++F+ ++A+ A Sbjct: 26 RLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85 Query: 241 IRELDGK 261 I+ L+GK Sbjct: 86 IQCLNGK 92
>Q9CR83:RBM18_MOUSE Probable RNA-binding protein 18 - Mus musculus (Mouse)| Length = 190 Score = 39.3 bits (90), Expect = 0.032 Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 8/67 (11%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVL--------KSVWVARKPPGFAFIDFDETRDAKDA 240 R+++GNLDP+ T + + FG + KS + +P G+ F++F+ ++A+ A Sbjct: 26 RLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85 Query: 241 IRELDGK 261 I+ L+GK Sbjct: 86 IQCLNGK 92
>Q96H35:RBM18_HUMAN Probable RNA-binding protein 18 - Homo sapiens (Human)| Length = 190 Score = 39.3 bits (90), Expect = 0.032 Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 8/67 (11%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVL--------KSVWVARKPPGFAFIDFDETRDAKDA 240 R+++GNLDP+ T + + FG + KS + +P G+ F++F+ ++A+ A Sbjct: 26 RLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85 Query: 241 IRELDGK 261 I+ L+GK Sbjct: 86 IQCLNGK 92
>O35479:HNRPG_MOUSE Heterogeneous nuclear ribonucleoprotein G - Mus musculus (Mouse)| Length = 388 Score = 39.3 bits (90), Expect = 0.032 Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 9/78 (11%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 ++++G L+ + +E F +G + + + + K GFAF+ + DAKDA R+ Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARD 68 Query: 250 LDGKN----GWRVELSTK 291 ++GK+ +VE +TK Sbjct: 69 MNGKSLDGKAIKVEQATK 86
>Q9VRV7:PM14_DROME Pre-mRNA branch site p14-like protein - Drosophila melanogaster| (Fruit fly) Length = 121 Score = 38.9 bits (89), Expect = 0.041 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPP--GFAFIDFDETRDAKDAIRELDGK 261 +YV NL + T+ E+ D F FG ++ + V P G AF+ +++ DAK+A L G Sbjct: 17 LYVRNLPYKITSDEMYDIFGKFGAIRQIRVGNTPETRGTAFVVYEDIFDAKNACDHLSGF 76 Query: 262 N 264 N Sbjct: 77 N 77
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 38.9 bits (89), Expect = 0.041 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVAR----KPPGFAFIDFDETRDAKDAIRELD 255 +++ NL P + + D F VFG + S +A K GF F+ F+E AK+AI L+ Sbjct: 128 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALN 187 Query: 256 G 258 G Sbjct: 188 G 188 Score = 35.4 bits (80), Expect = 0.46 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVAR----KPPGFAFIDFDETRDAKDAIRE 249 ++V NLD ++E+EF +G + S V R K GF F+ F +A AI E Sbjct: 324 LFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITE 381 Score = 34.3 bits (77), Expect = 1.0 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 5/63 (7%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIR 246 A +YVG+L+P + + D F G + S+ V R G+A+++F++ + AI Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIE 97 Query: 247 ELD 255 +L+ Sbjct: 98 QLN 100
>Q9Y4C8:RBM19_HUMAN Probable RNA-binding protein 19 - Homo sapiens (Human)| Length = 960 Score = 38.5 bits (88), Expect = 0.054 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPP------GFAFIDFDETRDAKDAI 243 +++ V N+ +A +REI + F FG LK+V + +K GF F+DF +DAK A Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891 Query: 244 REL 252 L Sbjct: 892 NAL 894 Score = 36.2 bits (82), Expect = 0.27 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVW-----VARKPPGFAFIDFDETRDAKDAIRE 249 R++V NL +T ++E F +G L + + +KP GFAFI F A A E Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 462 Query: 250 LDGK 261 +DG+ Sbjct: 463 VDGQ 466
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 38.5 bits (88), Expect = 0.054 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARKP----PGFAFIDFDETRDAKDAIRELD 255 VY+ N +++ F FG SV V R P GF F+ +++ DA A+ E++ Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252 Query: 256 GK 261 GK Sbjct: 253 GK 254 Score = 31.6 bits (70), Expect = 6.6 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVA---RKPPGFAFIDFDETRDAKDAIRE 249 + V++ NLD + + D F FG + S V G+AF+ F+ A AI + Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEK 157 Query: 250 LDG 258 ++G Sbjct: 158 MNG 160
>Q5BGA9:MRD1_EMENI Multiple RNA-binding domain-containing protein 1 - Emericella| nidulans (Aspergillus nidulans) Length = 819 Score = 38.5 bits (88), Expect = 0.054 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Frame = +1 Query: 76 VMARVYVGNLDPRATAREIEDEFRVFGVLKSVWVA-----RKPPGFAFIDFDETRDAKDA 240 + AR++V NL E+E F FG ++ + VA GFA++ + + A +A Sbjct: 293 ISARLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEA 352 Query: 241 IRELDGK 261 R LDGK Sbjct: 353 YRNLDGK 359
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 38.1 bits (87), Expect = 0.071 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 6/68 (8%) Frame = +1 Query: 76 VMARVYVGNLDPRATAREIEDEFRVFGV-LKSVWVARKP-----PGFAFIDFDETRDAKD 237 V A +++GNLDP + + D F FGV L++ + R P G+AFI+F + Sbjct: 98 VGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDA 157 Query: 238 AIRELDGK 261 AI ++G+ Sbjct: 158 AIEAMNGQ 165
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 38.1 bits (87), Expect = 0.071 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Frame = +1 Query: 76 VMARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARK------PPGFAFIDFDETRDAKD 237 V A ++VGNLDP + + D F FGV+ V + GFAFI+F + Sbjct: 98 VGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDT 157 Query: 238 AIRELDGK 261 A+ ++G+ Sbjct: 158 ALEAMNGQ 165
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 38.1 bits (87), Expect = 0.071 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 +++VG L+ + +ED F FG + V V + + GF FI F A DA+R Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66 Query: 250 LDGKN 264 ++G++ Sbjct: 67 MNGES 71
>Q8T6B9:PUF68_DROME Poly U-binding-splicing factor half pint - Drosophila melanogaster| (Fruit fly) Length = 637 Score = 38.1 bits (87), Expect = 0.071 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 5/66 (7%) Frame = +1 Query: 76 VMARVYVGNLDPRATAREIEDEFRVFGVLKSV---W--VARKPPGFAFIDFDETRDAKDA 240 +M RVYVG++ I F FG +KS+ W + +K GFAF++++ A+ A Sbjct: 128 LMCRVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLA 187 Query: 241 IRELDG 258 + +++G Sbjct: 188 LEQMNG 193
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 38.1 bits (87), Expect = 0.071 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKP----PGFAFIDFDETRDAKDAIRE 249 + +YV NLDP + ++++ F FG + S V R P G F+ F +A +A+ + Sbjct: 318 SNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQ 377 Query: 250 LDGK 261 L GK Sbjct: 378 LSGK 381
>Q4R813:HNRGT_MACFA Testis-specific heterogeneous nuclear ribonucleoprotein G-T -| Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 394 Score = 38.1 bits (87), Expect = 0.071 Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 5/65 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 ++++G L+ + +E EF +G + V + + K GFAF+ F+ +AK A R+ Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARD 68 Query: 250 LDGKN 264 ++GK+ Sbjct: 69 MNGKS 73
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 37.7 bits (86), Expect = 0.092 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVW-----VARKPPGFAFIDFDETRDAKDAIRE 249 R+YVGNL T+ ++ + F G + +V V + GFAF+ +AK+AIR Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174 Query: 250 LDG 258 DG Sbjct: 175 FDG 177
>Q27K34:PLA2_ORYSA Protein terminal ear1 homolog - Oryza sativa (Rice)| Length = 683 Score = 37.7 bits (86), Expect = 0.092 Identities = 18/51 (35%), Positives = 30/51 (58%) Frame = +1 Query: 109 PRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK 261 P + E+ + F+ +G +K V + P F++F +TRDA A+ EL+GK Sbjct: 231 PAMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGK 281
>Q4WJT7:MRD1_ASPFU Multiple RNA-binding domain-containing protein 1 - Aspergillus| fumigatus (Sartorya fumigata) Length = 825 Score = 37.7 bits (86), Expect = 0.092 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVWVA-----RKPPGFAFIDFDETRDAKDAIR 246 +R++V NL A+ ++E F FG ++ + VA GFA++ + E A A + Sbjct: 301 SRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYK 360 Query: 247 ELDGKN 264 ELDGK+ Sbjct: 361 ELDGKH 366
>Q9U1N0:HRP65_CHITE Hrp65 protein - Chironomus tentans (Midge)| Length = 535 Score = 37.7 bits (86), Expect = 0.092 Identities = 18/59 (30%), Positives = 33/59 (55%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK 261 R+Y+GNL T E+++ F +G + ++ FAF+ D +A+ A ++LDG+ Sbjct: 114 RLYIGNLTSDVTEEELKELFSPYGEISEAFI-NAEKNFAFLKIDYRANAERAKKDLDGR 171
>Q7TP47:HNRPQ_RAT Heterogeneous nuclear ribonucleoprotein Q - Rattus norvegicus (Rat)| Length = 533 Score = 37.7 bits (86), Expect = 0.092 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Frame = +1 Query: 76 VMARV---YVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIR 246 VMA+V +V NL T +E F FG L+ V +K +AFI FDE A A+ Sbjct: 243 VMAKVKVLFVRNLANTVTEEILEKSFSQFGKLERV---KKLKDYAFIHFDERDGAVKAME 299 Query: 247 ELDGKN 264 E++GK+ Sbjct: 300 EMNGKD 305
>Q7TMK9:HNRPQ_MOUSE Heterogeneous nuclear ribonucleoprotein Q - Mus musculus (Mouse)| Length = 623 Score = 37.7 bits (86), Expect = 0.092 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Frame = +1 Query: 76 VMARV---YVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIR 246 VMA+V +V NL T +E F FG L+ V +K +AFI FDE A A+ Sbjct: 333 VMAKVKVLFVRNLANTVTEEILEKSFSQFGKLERV---KKLKDYAFIHFDERDGAVKAME 389 Query: 247 ELDGKN 264 E++GK+ Sbjct: 390 EMNGKD 395
>P32588:PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 453 Score = 37.4 bits (85), Expect = 0.12 Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVA----RKPPGFAFIDFDETRDAKDAIRELD 255 +YVGNLD T ++ F+V G + ++ + K +AF+++ ++ DA A++ L+ Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLN 136 Query: 256 GK 261 GK Sbjct: 137 GK 138
>Q8CCS6:PABP2_MOUSE Polyadenylate-binding protein 2 - Mus musculus (Mouse)| Length = 302 Score = 37.4 bits (85), Expect = 0.12 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAI 243 +YVGN+D ATA E+E F G + V + + P GFA+I+F + + ++ Sbjct: 170 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL 226
>Q86U42:PABP2_HUMAN Polyadenylate-binding protein 2 - Homo sapiens (Human)| Length = 306 Score = 37.4 bits (85), Expect = 0.12 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAI 243 +YVGN+D ATA E+E F G + V + + P GFA+I+F + + ++ Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL 230
>Q28165:PABP2_BOVIN Polyadenylate-binding protein 2 - Bos taurus (Bovine)| Length = 306 Score = 37.4 bits (85), Expect = 0.12 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAI 243 +YVGN+D ATA E+E F G + V + + P GFA+I+F + + ++ Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL 230
>O60506:HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q - Homo sapiens (Human)| Length = 623 Score = 37.4 bits (85), Expect = 0.12 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Frame = +1 Query: 76 VMARV---YVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIR 246 VMA+V +V NL T +E F FG L+ V +K +AFI FDE A A+ Sbjct: 333 VMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV---KKLKDYAFIHFDERDGAVKAME 389 Query: 247 ELDGKN 264 E++GK+ Sbjct: 390 EMNGKD 395
>Q04832:HEXP_LEIMA DNA-binding protein HEXBP - Leishmania major| Length = 271 Score = 37.4 bits (85), Expect = 0.12 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = +1 Query: 337 DMKCYECGESGHFAREC 387 D KCY+CGESGH +REC Sbjct: 195 DRKCYKCGESGHMSREC 211 Score = 32.7 bits (73), Expect = 3.0 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = +1 Query: 337 DMKCYECGESGHFAREC 387 D CY+CGE+GH +R+C Sbjct: 252 DRTCYKCGEAGHISRDC 268 Score = 31.6 bits (70), Expect = 6.6 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = +1 Query: 337 DMKCYECGESGHFAREC 387 D CY+CG++GH +R+C Sbjct: 139 DRTCYKCGDAGHISRDC 155 Score = 31.6 bits (70), Expect = 6.6 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = +1 Query: 337 DMKCYECGESGHFAREC 387 D CY+CG++GH +R+C Sbjct: 167 DRTCYKCGDAGHISRDC 183 Score = 31.6 bits (70), Expect = 6.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +1 Query: 337 DMKCYECGESGHFAREC 387 D CY+CG+ GH +REC Sbjct: 221 DRACYKCGKPGHISREC 237
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 37.4 bits (85), Expect = 0.12 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 +++VG L + +E F +G + V V + + GF F+ F+ DAKDA+ Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 250 LDGKN 264 ++GK+ Sbjct: 67 MNGKS 71
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 37.4 bits (85), Expect = 0.12 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 +++VG L + +E F +G + V V + + GF F+ F+ DAKDA+ Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 250 LDGKN 264 ++GK+ Sbjct: 67 MNGKS 71
>Q27294:CAZ_DROME RNA-binding protein cabeza - Drosophila melanogaster (Fruit fly)| Length = 399 Score = 37.4 bits (85), Expect = 0.12 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 15/81 (18%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKS--------VWVARKPP-----GFAFIDFDETRD 228 ++V +DP T ++IE F G++K +W+ + G A + +D+T Sbjct: 122 IFVSGMDPSTTEQDIETHFGAIGIIKKDKRTMKPKIWLYKNKETGASKGEATVTYDDTNA 181 Query: 229 AKDAIRELDGK--NGWRVELS 285 A+ AI DG+ NG +++S Sbjct: 182 AQSAIEWFDGRDFNGNAIKVS 202
>Q5RC41:RBM14_PONPY RNA-binding protein 14 - Pongo pygmaeus (Orangutan)| Length = 669 Score = 37.0 bits (84), Expect = 0.16 Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK- 261 +++VGN+ T++E+ F G + V + +AF+ ++ DAK AI +L+GK Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVVKD---YAFVHMEKEADAKAAIAQLNGKE 136 Query: 262 -NGWR--VELSTK 291 G R VELSTK Sbjct: 137 VKGKRINVELSTK 149
>Q8C2Q3:RBM14_MOUSE RNA-binding protein 14 - Mus musculus (Mouse)| Length = 669 Score = 37.0 bits (84), Expect = 0.16 Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK- 261 +++VGN+ T++E+ F G + V + +AF+ ++ DAK AI +L+GK Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVVKD---YAFVHMEKEADAKAAIAQLNGKE 136 Query: 262 -NGWR--VELSTK 291 G R VELSTK Sbjct: 137 VKGKRINVELSTK 149
>Q96PK6:RBM14_HUMAN RNA-binding protein 14 - Homo sapiens (Human)| Length = 669 Score = 37.0 bits (84), Expect = 0.16 Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK- 261 +++VGN+ T++E+ F G + V + +AF+ ++ DAK AI +L+GK Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVVKD---YAFVHMEKEADAKAAIAQLNGKE 136 Query: 262 -NGWR--VELSTK 291 G R VELSTK Sbjct: 137 VKGKRINVELSTK 149
>Q5EA36:RBM14_BOVIN RNA-binding protein 14 - Bos taurus (Bovine)| Length = 669 Score = 37.0 bits (84), Expect = 0.16 Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGK- 261 +++VGN+ T++E+ F G + V + +AF+ ++ DAK AI +L+GK Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVVKD---YAFVHMEKEADAKAAIAQLNGKE 136 Query: 262 -NGWR--VELSTK 291 G R VELSTK Sbjct: 137 VKGKRINVELSTK 149
>Q6NVP7:PABP2_XENTR Polyadenylate-binding protein 2 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 296 Score = 37.0 bits (84), Expect = 0.16 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAI 243 +YVGN+D ATA E+E F G + V + P GFA+I+F + + ++ Sbjct: 165 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSL 221
>Q7ZXB8:PAB2B_XENLA Polyadenylate-binding protein 2-B - Xenopus laevis (African clawed| frog) Length = 295 Score = 37.0 bits (84), Expect = 0.16 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAI 243 +YVGN+D ATA E+E F G + V + P GFA+I+F + + ++ Sbjct: 164 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSL 220
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 37.0 bits (84), Expect = 0.16 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 +++VG L + +E F +G + V V + + GF F+ F+ DAKDA+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 250 LDGKN 264 ++GK+ Sbjct: 67 MNGKS 71
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 37.0 bits (84), Expect = 0.16 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 +++VG L + +E F +G + V V + + GF F+ F+ DAKDA+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 250 LDGKN 264 ++GK+ Sbjct: 67 MNGKS 71
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 37.0 bits (84), Expect = 0.16 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 +++VG L + +E F +G + V V + + GF F+ F+ DAKDA+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 250 LDGKN 264 ++GK+ Sbjct: 67 MNGKS 71
>Q8CHI8:EP400_MOUSE E1A-binding protein p400 - Mus musculus (Mouse)| Length = 3072 Score = 36.6 bits (83), Expect = 0.20 Identities = 42/131 (32%), Positives = 53/131 (40%), Gaps = 27/131 (20%) Frame = +3 Query: 516 QPTGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKH----QQVTTAY- 680 Q +V Q+ QQITT P+ + AA P K Q +TT A+ QQV T Sbjct: 2899 QGQAAVQQKLTTQQITTQGPQQK--VAYAAQPALKTQFLTTPISQAQKLAGTQQVQTQIQ 2956 Query: 681 ------------PCTKHQQVTSASSRQKHQQVTTASSCQKHQQV----TTTSSCQK---- 800 P QQV SAS + Q VT + QQV T T++ Q Sbjct: 2957 VAKLPQVVQQQTPVASIQQVASASQQASPQTVTLTQATAAGQQVQMIPTVTATAQLVQQK 3016 Query: 801 --HEQVTTTCS 827 +QV TT S Sbjct: 3017 LIQQQVVTTAS 3027
>Q09295:YQO4_CAEEL Putative RNA-binding protein EEED8.4 - Caenorhabditis elegans| Length = 191 Score = 36.6 bits (83), Expect = 0.21 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAI 243 V++GN+D +T EIE+ F+ G + + +K FA+I+FD++ ++A+ Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>Q6PDU1:SFRS2_RAT Splicing factor, arginine/serine-rich 2 - Rattus norvegicus (Rat)| Length = 221 Score = 36.6 bits (83), Expect = 0.21 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAI 243 M + V NL R + + F +G + V++ R + GFAF+ F + RDA+DA+ Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 72 Query: 244 RELDG 258 +DG Sbjct: 73 DAMDG 77
>Q06A98:SFRS2_PIG Splicing factor, arginine/serine-rich 2 - Sus scrofa (Pig)| Length = 221 Score = 36.6 bits (83), Expect = 0.21 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAI 243 M + V NL R + + F +G + V++ R + GFAF+ F + RDA+DA+ Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 72 Query: 244 RELDG 258 +DG Sbjct: 73 DAMDG 77
>Q5R1W5:SFRS2_PANTR Splicing factor, arginine/serine-rich 2 - Pan troglodytes| (Chimpanzee) Length = 221 Score = 36.6 bits (83), Expect = 0.21 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAI 243 M + V NL R + + F +G + V++ R + GFAF+ F + RDA+DA+ Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 72 Query: 244 RELDG 258 +DG Sbjct: 73 DAMDG 77
>Q62093:SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 - Mus musculus (Mouse)| Length = 221 Score = 36.6 bits (83), Expect = 0.21 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAI 243 M + V NL R + + F +G + V++ R + GFAF+ F + RDA+DA+ Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 72 Query: 244 RELDG 258 +DG Sbjct: 73 DAMDG 77
>Q01130:SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 - Homo sapiens (Human)| Length = 221 Score = 36.6 bits (83), Expect = 0.21 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAI 243 M + V NL R + + F +G + V++ R + GFAF+ F + RDA+DA+ Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 72 Query: 244 RELDG 258 +DG Sbjct: 73 DAMDG 77
>P30352:SFRS2_CHICK Splicing factor, arginine/serine-rich 2 - Gallus gallus (Chicken)| Length = 221 Score = 36.6 bits (83), Expect = 0.21 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAI 243 M + V NL R + + F +G + V++ R + GFAF+ F + RDA+DA+ Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 72 Query: 244 RELDG 258 +DG Sbjct: 73 DAMDG 77
>Q3MHR5:SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 - Bos taurus (Bovine)| Length = 221 Score = 36.6 bits (83), Expect = 0.21 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAI 243 M + V NL R + + F +G + V++ R + GFAF+ F + RDA+DA+ Sbjct: 13 MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 72 Query: 244 RELDG 258 +DG Sbjct: 73 DAMDG 77
>Q15414:RBY1A_HUMAN RNA-binding motif protein, Y chromosome, family 1 member A1 - Homo| sapiens (Human) Length = 496 Score = 36.6 bits (83), Expect = 0.21 Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR----KPPGFAFIDFDETRDAKDAIREL 252 ++++G L+ + ++ F G + V + + K GFAFI F+ DAK+A +++ Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDM 68 Query: 253 DGKN 264 +GK+ Sbjct: 69 NGKS 72
>Q9FMP4:PM14_ARATH Pre-mRNA branch site p14-like protein - Arabidopsis thaliana| (Mouse-ear cress) Length = 124 Score = 36.6 bits (83), Expect = 0.21 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVA--RKPPGFAFIDFDETRDAKDAIRELDGK 261 +YV NL T+ E+ D F +G ++ + + + G AF+ +++ DAK+A+ L G Sbjct: 21 LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGCDKATKGTAFVVYEDIYDAKNAVDHLSGF 80 Query: 262 N 264 N Sbjct: 81 N 81
>O13620:MRD1_SCHPO Multiple RNA-binding domain-containing protein 1 -| Schizosaccharomyces pombe (Fission yeast) Length = 833 Score = 36.6 bits (83), Expect = 0.21 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIRE 249 R+++ NL +++ F FG L+ V + P GFA+IDF + DA A E Sbjct: 324 RLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAYLE 383 Query: 250 LDGK 261 LD K Sbjct: 384 LDAK 387
>P22808:VND_DROME Homeobox protein vnd - Drosophila melanogaster (Fruit fly)| Length = 723 Score = 36.2 bits (82), Expect = 0.27 Identities = 37/131 (28%), Positives = 46/131 (35%), Gaps = 14/131 (10%) Frame = +2 Query: 512 ATAHGIGLP---GSEVTADHHRLPARGASPGLRRLPAHEASAGHHR---LPVGEASTGHH 673 A HG L SE T+ H + + L PA ++ HH G HH Sbjct: 223 AAHHGSDLSHHSASESTSGHRGQGSHTSPSALSPTPAGVSADEHHNGSGTGGGAGEADHH 282 Query: 674 RLPVHEASAGHLRLLAPEASAGHH-RLLVPEASAGHHHLLVPEA*ASHH-------HLLV 829 H A H + P HH LL+P+ HH V +HH H Sbjct: 283 STTEHHAPPSHPQQQHPHHQQHHHPHLLLPQQ---HHQQAVAPLPLAHHQSGEAQSHAHA 339 Query: 830 NRAIAGPLHSH 862 N A A L SH Sbjct: 340 NAAAAHLLASH 350
>P40561:SGN1_YEAST RNA-binding protein SGN1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 250 Score = 36.2 bits (82), Expect = 0.27 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 9/67 (13%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIR-- 246 ++VGN+ P T +IED F+ G +K + + P G+ +I+F+ + A++ Sbjct: 66 IFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQLN 125 Query: 247 --ELDGK 261 EL GK Sbjct: 126 GGELKGK 132
>O14102:SAP49_SCHPO Spliceosome-associated protein 49 - Schizosaccharomyces pombe| (Fission yeast) Length = 335 Score = 36.2 bits (82), Expect = 0.27 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFG-VLKSVWVAR----KPPGFAFIDFDETRDAKDAIR 246 A ++VGNLDP R + D F G ++K+ VAR + G+ F+ +D A AI Sbjct: 99 ANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIE 158 Query: 247 ELDGK 261 ++ + Sbjct: 159 AMNNQ 163
>Q9QYK2:PRGC1_RAT Peroxisome proliferator-activated receptor gamma coactivator| 1-alpha - Rattus norvegicus (Rat) Length = 796 Score = 36.2 bits (82), Expect = 0.27 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 2/98 (2%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPG--FAFIDFDETRDAKDAIRELDGK 261 +YVG + P T E+ D F VFG ++ V + G + FI + T DA A+ + Sbjct: 677 IYVGKIRPDTTRTELRDRFEVFGEIEECTVNLRDDGDSYGFITYRYTCDAFAAL-----E 731 Query: 262 NGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHF 375 NG+ + S + D + Y CG F Sbjct: 732 NGYTLRRSNE--------------TDFELYFCGRKQFF 755
>Q865B6:PRGC1_PIG Peroxisome proliferator-activated receptor gamma coactivator| 1-alpha - Sus scrofa (Pig) Length = 796 Score = 36.2 bits (82), Expect = 0.27 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 2/98 (2%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPG--FAFIDFDETRDAKDAIRELDGK 261 +YVG + P T E+ D F VFG ++ V + G + FI + T DA A+ + Sbjct: 677 IYVGKIRPDTTRTELRDRFEVFGEIEECTVNLRDDGDSYGFITYRYTCDAFAAL-----E 731 Query: 262 NGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHF 375 NG+ + S + D + Y CG F Sbjct: 732 NGYTLRRSNE--------------TDFELYFCGRKQFF 755
>O70343:PRGC1_MOUSE Peroxisome proliferator-activated receptor gamma coactivator| 1-alpha - Mus musculus (Mouse) Length = 797 Score = 36.2 bits (82), Expect = 0.27 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 2/98 (2%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPG--FAFIDFDETRDAKDAIRELDGK 261 +YVG + P T E+ D F VFG ++ V + G + FI + T DA A+ + Sbjct: 678 IYVGKIRPDTTRTELRDRFEVFGEIEECTVNLRDDGDSYGFITYRYTCDAFAAL-----E 732 Query: 262 NGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHF 375 NG+ + S + D + Y CG F Sbjct: 733 NGYTLRRSNE--------------TDFELYFCGRKQFF 756
>Q9UBK2:PRGC1_HUMAN Peroxisome proliferator-activated receptor gamma coactivator| 1-alpha - Homo sapiens (Human) Length = 798 Score = 36.2 bits (82), Expect = 0.27 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 2/98 (2%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPG--FAFIDFDETRDAKDAIRELDGK 261 +YVG + P T E+ D F VFG ++ V + G + FI + T DA A+ + Sbjct: 679 IYVGKIRPDTTRTELRDRFEVFGEIEECTVNLRDDGDSYGFITYRYTCDAFAAL-----E 733 Query: 262 NGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHF 375 NG+ + S + D + Y CG F Sbjct: 734 NGYTLRRSNE--------------TDFELYFCGRKQFF 757
>Q865B7:PRGC1_BOVIN Peroxisome proliferator-activated receptor gamma coactivator| 1-alpha - Bos taurus (Bovine) Length = 796 Score = 36.2 bits (82), Expect = 0.27 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 2/98 (2%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPG--FAFIDFDETRDAKDAIRELDGK 261 +YVG + P T E+ D F VFG ++ V + G + FI + T DA A+ + Sbjct: 677 IYVGKIRPDTTRTELRDRFEVFGEIEECTVNLRDDGDSYGFITYRYTCDAFAAL-----E 731 Query: 262 NGWRVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHF 375 NG+ + S + D + Y CG F Sbjct: 732 NGYTLRRSNE--------------TDFELYFCGRKQFF 755
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 36.2 bits (82), Expect = 0.27 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV----ARKPPGFAFIDFDETRDAKDAIRELD 255 VY+ N ++D F FG SV V + K GF F+ F+ DA+ A+ E++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 256 GK 261 GK Sbjct: 253 GK 254 Score = 33.1 bits (74), Expect = 2.3 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWV---ARKPPGFAFIDFDETRDAKDAIRE 249 + +YV NLD + F FG + S V + GF F+ F +A A+ E Sbjct: 293 VVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 352 Query: 250 LDGK 261 ++G+ Sbjct: 353 MNGR 356
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 36.2 bits (82), Expect = 0.27 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV----ARKPPGFAFIDFDETRDAKDAIRELD 255 VY+ N ++D F FG SV V + K GF F+ F+ DA+ A+ E++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 256 GK 261 GK Sbjct: 253 GK 254 Score = 35.0 bits (79), Expect = 0.60 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV---ARKPPGFAFIDFDETRDAKDAIRELDG 258 +YV NLD + EF FG + S V + GF F+ F +A A+ E++G Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 259 K 261 + Sbjct: 356 R 356
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 36.2 bits (82), Expect = 0.27 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV----ARKPPGFAFIDFDETRDAKDAIRELD 255 VY+ N ++D F FG SV V + K GF F+ F+ DA+ A+ E++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 256 GK 261 GK Sbjct: 253 GK 254 Score = 35.0 bits (79), Expect = 0.60 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV---ARKPPGFAFIDFDETRDAKDAIRELDG 258 +YV NLD + EF FG + S V + GF F+ F +A A+ E++G Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 259 K 261 + Sbjct: 356 R 356
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 36.2 bits (82), Expect = 0.27 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV----ARKPPGFAFIDFDETRDAKDAIRELD 255 VY+ N ++D F FG SV V + K GF F+ F+ DA+ A+ E++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 256 GK 261 GK Sbjct: 253 GK 254 Score = 35.0 bits (79), Expect = 0.60 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV---ARKPPGFAFIDFDETRDAKDAIRELDG 258 +YV NLD + EF FG + S V + GF F+ F +A A+ E++G Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 259 K 261 + Sbjct: 356 R 356
>O13674:MUG24_SCHPO Meiotically up-regulated gene 24 protein - Schizosaccharomyces| pombe (Fission yeast) Length = 654 Score = 36.2 bits (82), Expect = 0.27 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 3/93 (3%) Frame = +1 Query: 7 LAARFANPQSXXXXXXXXXXXXXVMARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARK 186 L FA P V++GNL +EIE+ F FG ++ + + K Sbjct: 274 LKLTFARPSPLPESIQNFCSNTAASRNVFIGNLPSSYHEKEIEEAFGKFGKIEHIKILSK 333 Query: 187 PPGFAFIDFDETRDAKDAIRELD---GKNGWRV 276 AF+ F RDA +R L + WR+ Sbjct: 334 -KNIAFVHFLNIRDAIKVVRTLSCDPDYHSWRI 365
>Q38896:GRP2B_ARATH Glycine-rich protein 2b - Arabidopsis thaliana (Mouse-ear cress)| Length = 201 Score = 36.2 bits (82), Expect = 0.27 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +1 Query: 340 MKCYECGESGHFAREC 387 + CY CGESGHFAR+C Sbjct: 180 LSCYSCGESGHFARDC 195 Score = 32.7 bits (73), Expect = 3.0 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +1 Query: 337 DMKCYECGESGHFAREC 387 D C++CGE GH AREC Sbjct: 135 DNSCFKCGEPGHMAREC 151
>Q6TY21:EPA2B_XENLA Embryonic polyadenylate-binding protein 2-B - Xenopus laevis| (African clawed frog) Length = 218 Score = 36.2 bits (82), Expect = 0.27 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 5/61 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 VYVGN+D +TA+++E F G + + + + P G+A+I+F E R++ DA + Sbjct: 95 VYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAE-RNSVDAAVAM 153 Query: 253 D 255 D Sbjct: 154 D 154
>O13559:YRF14_YEAST Y' element ATP-dependent helicase protein 1 copy 4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 1382 Score = 35.8 bits (81), Expect = 0.35 Identities = 25/102 (24%), Positives = 37/102 (36%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + ITT S + + + A + TTA + TT + Sbjct: 867 TTTASINVRTSAITTESTNSSTNATTTASTNVRTSATTTASINVR-TSATTTESTNSNTS 925 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT+S TTT S Sbjct: 926 ATTTESTDSNTSATTTESTDSNTSATTTASTNSSTNATTTAS 967 Score = 35.0 bits (79), Expect = 0.60 Identities = 25/102 (24%), Positives = 35/102 (34%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TTAS ++ + TTA + TTA Sbjct: 855 TTTASTNVRTSATTTASINVRTSAITTESTNSSTNATTTASTNVRTSATTTA-SINVRTS 913 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT S + TTT S Sbjct: 914 ATTTESTNSNTSATTTESTDSNTSATTTESTDSNTSATTTAS 955
>P24088:YRF11_YEAST Y' element ATP-dependent helicase protein 1 copies 1/5/8 -| Saccharomyces cerevisiae (Baker's yeast) Length = 1796 Score = 35.8 bits (81), Expect = 0.35 Identities = 25/102 (24%), Positives = 37/102 (36%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + ITT S + + + A + TTA + TT + Sbjct: 1281 TTTASINVRTSAITTESTNSSTNATTTASTNVRTSATTTASINVR-TSATTTESTNSNTS 1339 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT+S TTT S Sbjct: 1340 ATTTESTDSNTSATTTESTDSNTSATTTASTNSSTNATTTAS 1381 Score = 35.0 bits (79), Expect = 0.60 Identities = 25/102 (24%), Positives = 35/102 (34%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TTAS ++ + TTA + TTA Sbjct: 1269 TTTASTNVRTSATTTASINVRTSAITTESTNSSTNATTTASTNVRTSATTTA-SINVRTS 1327 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT S + TTT S Sbjct: 1328 ATTTESTNSNTSATTTESTDSNTSATTTESTDSNTSATTTAS 1369
>Q9HEQ9:TCG1_SCHPO Single-stranded TG1-3 DNA-binding protein - Schizosaccharomyces| pombe (Fission yeast) Length = 348 Score = 35.8 bits (81), Expect = 0.35 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 9/68 (13%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARK---------PPGFAFIDFDETRDAKD 237 RV+VG L EI F G ++ V + + P G AF+ F+ D Sbjct: 45 RVFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVDK 104 Query: 238 AIRELDGK 261 AI L+GK Sbjct: 105 AIETLNGK 112
>Q10193:SRP1_SCHPO Pre-mRNA-splicing factor srp1 - Schizosaccharomyces pombe (Fission| yeast) Length = 275 Score = 35.8 bits (81), Expect = 0.35 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV----ARKPPGFAFIDFDETRDAKDAIRELD 255 +YV ARE+ EF FG L + R FAF++++++RDA+DA E+ Sbjct: 9 LYVTGFRDGMRARELAYEFEPFGPLIRCDIPIPRTRTSRPFAFVEYEDSRDAEDAYYEVH 68 Query: 256 GK 261 G+ Sbjct: 69 GR 70
>P17133:RU17_DROME U1 small nuclear ribonucleoprotein 70 kDa - Drosophila melanogaster| (Fruit fly) Length = 448 Score = 35.8 bits (81), Expect = 0.35 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIREL 252 +++ ++ + ++ EF +G +K + + KP G+AFI+++ RD A + Sbjct: 104 LFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHA 163 Query: 253 DGK 261 DGK Sbjct: 164 DGK 166
>Q66J99:RBM18_XENLA Probable RNA-binding protein 18 - Xenopus laevis (African clawed| frog) Length = 190 Score = 35.8 bits (81), Expect = 0.35 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 8/67 (11%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVL--------KSVWVARKPPGFAFIDFDETRDAKDA 240 R+++GN+DP+ T + + FG + KS + +P G+ F++F+ +A+ A Sbjct: 26 RLWIGNVDPKITEYHLLKLLQKFGKVKQFDFLFHKSGPLEGQPRGYCFVNFETKAEAERA 85 Query: 241 IRELDGK 261 I L+GK Sbjct: 86 IHCLNGK 92
>Q6PBM8:RBM18_DANRE Probable RNA-binding protein 18 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 188 Score = 35.8 bits (81), Expect = 0.35 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 8/67 (11%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVL--------KSVWVARKPPGFAFIDFDETRDAKDA 240 R+++GN+DP+ T + FG + KS + +P G+ F++F +A+ A Sbjct: 24 RLWIGNIDPKITEYHLVKLLEKFGKVKQFDFLFHKSGPLEGQPRGYCFVNFHTKEEAERA 83 Query: 241 IRELDGK 261 I+ L+GK Sbjct: 84 IQCLNGK 90
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 35.8 bits (81), Expect = 0.35 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPG----FAFIDFDETRDAKDAIRELD 255 +YV NL + ++D F FG + SV V R G F F++F++ +A+ A+ ++ Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252 Query: 256 GK 261 GK Sbjct: 253 GK 254 Score = 35.0 bits (79), Expect = 0.60 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARK---PPGFAFIDFDETRDAKDAIRELDG 258 +YV NLD ++ EF +GV+ S V + GF F+ F +A A+ E++G Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 259 K 261 + Sbjct: 356 R 356
>Q9DDY9:PAB2A_XENLA Polyadenylate-binding protein 2-A - Xenopus laevis (African clawed| frog) Length = 296 Score = 35.8 bits (81), Expect = 0.35 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAI 243 +YVGN+D ATA E+E F G + V + P GFA+I+F + + ++ Sbjct: 165 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSL 221
>Q01560:NOP3_YEAST Nucleolar protein 3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 414 Score = 35.8 bits (81), Expect = 0.35 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +1 Query: 127 EIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDGKN 264 E+ + F FG +K V + GFAF++F+E A AI E+ GK+ Sbjct: 140 ELNEIFGPFGPMKEVKILN---GFAFVEFEEAESAAKAIEEVHGKS 182
>O04425:FCA_ARATH Flowering time control protein FCA - Arabidopsis thaliana| (Mouse-ear cress) Length = 747 Score = 35.8 bits (81), Expect = 0.35 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 4/65 (6%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVA----RKPPGFAFIDFDETRDAKDAIREL 252 +++VG+L+ +AT +E+E+ F FG ++ V++ R+ G F+ + A AI Sbjct: 212 KLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAI--- 268 Query: 253 DGKNG 267 DG NG Sbjct: 269 DGLNG 273
>Q804A5:EPA2A_XENLA Embryonic polyadenylate-binding protein 2-A - Xenopus laevis| (African clawed frog) Length = 218 Score = 35.8 bits (81), Expect = 0.35 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 VYVGN+D TA+++E F G + + + + P G+A+I+F E R++ DA + Sbjct: 95 VYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAE-RNSVDAAVTM 153 Query: 253 D 255 D Sbjct: 154 D 154
>P62634:CNBP_RAT Cellular nucleic acid-binding protein - Rattus norvegicus (Rat)| Length = 177 Score = 35.8 bits (81), Expect = 0.35 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 Query: 337 DMKCYECGESGHFARECRL 393 ++ CY CGESGH AREC + Sbjct: 155 EVNCYRCGESGHLARECTI 173 Score = 32.7 bits (73), Expect = 3.0 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 346 CYECGESGHFARECRL 393 CY CGESGH A++C L Sbjct: 54 CYRCGESGHLAKDCDL 69 Score = 32.0 bits (71), Expect = 5.1 Identities = 10/15 (66%), Positives = 14/15 (93%) Frame = +1 Query: 343 KCYECGESGHFAREC 387 +C++CG SGH+AREC Sbjct: 5 ECFKCGRSGHWAREC 19
>Q5R5R5:CNBP_PONPY Cellular nucleic acid-binding protein - Pongo pygmaeus (Orangutan)| Length = 177 Score = 35.8 bits (81), Expect = 0.35 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 Query: 337 DMKCYECGESGHFARECRL 393 ++ CY CGESGH AREC + Sbjct: 155 EVNCYRCGESGHLARECTI 173 Score = 32.7 bits (73), Expect = 3.0 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 346 CYECGESGHFARECRL 393 CY CGESGH A++C L Sbjct: 54 CYRCGESGHLAKDCDL 69 Score = 32.0 bits (71), Expect = 5.1 Identities = 10/15 (66%), Positives = 14/15 (93%) Frame = +1 Query: 343 KCYECGESGHFAREC 387 +C++CG SGH+AREC Sbjct: 5 ECFKCGRSGHWAREC 19
>P53996:CNBP_MOUSE Cellular nucleic acid-binding protein - Mus musculus (Mouse)| Length = 178 Score = 35.8 bits (81), Expect = 0.35 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 Query: 337 DMKCYECGESGHFARECRL 393 ++ CY CGESGH AREC + Sbjct: 156 EVNCYRCGESGHLARECTI 174 Score = 32.7 bits (73), Expect = 3.0 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 346 CYECGESGHFARECRL 393 CY CGESGH A++C L Sbjct: 54 CYRCGESGHLAKDCDL 69 Score = 32.0 bits (71), Expect = 5.1 Identities = 10/15 (66%), Positives = 14/15 (93%) Frame = +1 Query: 343 KCYECGESGHFAREC 387 +C++CG SGH+AREC Sbjct: 5 ECFKCGRSGHWAREC 19
>P62633:CNBP_HUMAN Cellular nucleic acid-binding protein - Homo sapiens (Human)| Length = 177 Score = 35.8 bits (81), Expect = 0.35 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 Query: 337 DMKCYECGESGHFARECRL 393 ++ CY CGESGH AREC + Sbjct: 155 EVNCYRCGESGHLARECTI 173 Score = 32.7 bits (73), Expect = 3.0 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 346 CYECGESGHFARECRL 393 CY CGESGH A++C L Sbjct: 54 CYRCGESGHLAKDCDL 69 Score = 32.0 bits (71), Expect = 5.1 Identities = 10/15 (66%), Positives = 14/15 (93%) Frame = +1 Query: 343 KCYECGESGHFAREC 387 +C++CG SGH+AREC Sbjct: 5 ECFKCGRSGHWAREC 19
>O42395:CNBP_CHICK Cellular nucleic acid-binding protein - Gallus gallus (Chicken)| Length = 172 Score = 35.8 bits (81), Expect = 0.35 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 Query: 337 DMKCYECGESGHFARECRL 393 ++ CY CGESGH AREC + Sbjct: 150 EVNCYRCGESGHLARECTI 168 Score = 32.7 bits (73), Expect = 3.0 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 346 CYECGESGHFARECRL 393 CY CGESGH A++C L Sbjct: 48 CYRCGESGHLAKDCDL 63
>Q3T0Q6:CNBP_BOVIN Cellular nucleic acid-binding protein - Bos taurus (Bovine)| Length = 170 Score = 35.8 bits (81), Expect = 0.35 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +1 Query: 337 DMKCYECGESGHFARECRL 393 ++ CY CGESGH AREC + Sbjct: 148 EVNCYRCGESGHLARECTI 166 Score = 32.7 bits (73), Expect = 3.0 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 346 CYECGESGHFARECRL 393 CY CGESGH A++C L Sbjct: 47 CYRCGESGHLAKDCDL 62 Score = 32.0 bits (71), Expect = 5.1 Identities = 10/15 (66%), Positives = 14/15 (93%) Frame = +1 Query: 343 KCYECGESGHFAREC 387 +C++CG SGH+AREC Sbjct: 5 ECFKCGRSGHWAREC 19
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 35.8 bits (81), Expect = 0.35 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 ++++G L+ +E F +G + V V + + GF F+ F+ DAKDA+ Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65 Query: 250 LDGKN 264 ++GK+ Sbjct: 66 MNGKS 70
>P47179:DAN4_YEAST Cell wall protein DAN4 precursor - Saccharomyces cerevisiae| (Baker's yeast) Length = 1161 Score = 35.4 bits (80), Expect = 0.46 Identities = 23/104 (22%), Positives = 51/104 (49%) Frame = +3 Query: 555 QITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQVTSASSRQKHQ 734 Q+T+++ +V+++ T+ QVT++ + T++ T+ QVTS++ Sbjct: 368 QVTSSAEPTTVSEVTSSVEPTRSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVS 427 Query: 735 QVTTASSCQKHQQVTTTSSCQKHEQVTTTCS*TEL*QVPCTATP 866 + T++ + QVT+++ + T++ T QV +A P Sbjct: 428 EFTSSVEPTRSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEP 471 Score = 35.0 bits (79), Expect = 0.60 Identities = 28/115 (24%), Positives = 51/115 (44%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T SV Q ++A P S+ P T+ QVT++ + T++ T+ Q Sbjct: 382 TSSVEPTRSSQVTSSAEPTTVSEFTSSVEP-TRSSQVTSSAEPTTVSEFTSSVEPTRSSQ 440 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS*TEL*QVPCTATP 866 VTS++ + T++ + QVT+++ + T++ T QV +A P Sbjct: 441 VTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEP 495 Score = 33.1 bits (74), Expect = 2.3 Identities = 22/98 (22%), Positives = 47/98 (47%) Frame = +3 Query: 528 SVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQVT 707 S ++ + + T++ QV+++ T + T++ + QVT++ T + T Sbjct: 443 SSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFT 502 Query: 708 SASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTT 821 S+ + QVT+++ +VT++ + QVTTT Sbjct: 503 SSVEPIRSSQVTSSAEPTTVSEVTSSVEPIRSSQVTTT 540 Score = 32.7 bits (73), Expect = 3.0 Identities = 27/115 (23%), Positives = 50/115 (43%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T SV Q ++A P S+ P T+ QVT++ + T++ T+ Q Sbjct: 406 TSSVEPTRSSQVTSSAEPTTVSEFTSSVEP-TRSSQVTSSAEPTTVSEFTSSVEPTRSSQ 464 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS*TEL*QVPCTATP 866 VTS++ + T++ + QVT+++ + T++ QV +A P Sbjct: 465 VTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFTSSVEPIRSSQVTSSAEP 519 Score = 32.0 bits (71), Expect = 5.0 Identities = 21/113 (18%), Positives = 52/113 (46%) Frame = +3 Query: 528 SVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQVT 707 S ++ + ++T++ QV+++ T + T++ + QVT++ T + T Sbjct: 371 SSAEPTTVSEVTSSVEPTRSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFT 430 Query: 708 SASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS*TEL*QVPCTATP 866 S+ + QVT+++ + T++ + QVT++ T + + + P Sbjct: 431 SSVEPTRSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFTSSVEP 483 Score = 32.0 bits (71), Expect = 5.0 Identities = 22/113 (19%), Positives = 52/113 (46%) Frame = +3 Query: 528 SVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQVT 707 S ++ + + T++ QV+++ T + T++ + QVT++ T + T Sbjct: 419 SSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFT 478 Query: 708 SASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS*TEL*QVPCTATP 866 S+ + QVT+++ + T++ + QVT++ T + +V + P Sbjct: 479 SSVEPTRSSQVTSSAEPTTVSEFTSSVEPIRSSQVTSSAEPTTVSEVTSSVEP 531
>Q09301:YQOC_CAEEL Putative RNA-binding protein EEED8.12 - Caenorhabditis elegans| Length = 197 Score = 35.4 bits (80), Expect = 0.46 Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAI 243 V++GN+D +T E+E+ F+ G + + +K FA+I+FD++ ++A+ Sbjct: 63 VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 119
>Q9JLI8:SART3_MOUSE Squamous cell carcinoma antigen recognized by T-cells 3 - Mus| musculus (Mouse) Length = 962 Score = 35.4 bits (80), Expect = 0.46 Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV----ARKPPGFAFIDFDETRDAKDAIREL 252 ++++ L T E+ED + G +K + + A KP G A+++++ A A+ ++ Sbjct: 802 KLFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKM 861 Query: 253 DG 258 DG Sbjct: 862 DG 863
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 35.4 bits (80), Expect = 0.46 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPG----FAFIDFDETRDAKDAIRELD 255 VYV NL E+ F FGV+ S V R G F F++F+ T A A+ +++ Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMN 290 Query: 256 G 258 G Sbjct: 291 G 291 Score = 34.3 bits (77), Expect = 1.0 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 4/60 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVA----RKPPGFAFIDFDETRDAKDAIRELD 255 +Y G+LDP+ T + D F+ + SV V R+ G+A+I+F DA A+ L+ Sbjct: 51 LYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEALN 110 Score = 32.7 bits (73), Expect = 3.0 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPP----GFAFIDFDETRDAKDAIRE 249 A +Y+ NLD ++++ F +G + S V P GF F+ + +A A+ E Sbjct: 332 ANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSE 391 Query: 250 LDGK 261 ++GK Sbjct: 392 MNGK 395 Score = 32.3 bits (72), Expect = 3.9 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVAR----KPPGFAFIDFDETRDAKDAIRELD 255 +++ NLD + + + F FG + S VA + G+ F+ F++ A+ AI +L+ Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197 Query: 256 G 258 G Sbjct: 198 G 198
>P27484:GRP2_NICSY Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco)| Length = 214 Score = 35.4 bits (80), Expect = 0.46 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = +1 Query: 346 CYECGESGHFAREC 387 CY+CGE GHFAREC Sbjct: 196 CYKCGEDGHFAREC 209 Score = 34.3 bits (77), Expect = 1.0 Identities = 11/14 (78%), Positives = 14/14 (100%) Frame = +1 Query: 346 CYECGESGHFAREC 387 C++CGESGHFAR+C Sbjct: 159 CFKCGESGHFARDC 172
>Q09511:RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4 - Caenorhabditis| elegans Length = 196 Score = 35.0 bits (79), Expect = 0.60 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Frame = +1 Query: 94 VGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIRELDG 258 + NL + T ++ F +G + V + +R+ GF F+ F E RDA+ A+ DG Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82 Query: 259 K 261 K Sbjct: 83 K 83
>Q99020:ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B - Mus musculus (Mouse)| Length = 285 Score = 35.0 bits (79), Expect = 0.60 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPP-----GFAFIDFDETRDAKDAIRE 249 +++VG L+P AT +I + F FG ++++ + P GF FI F E K + + Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK 219
>Q09100:RNP24_SCHPO RNA-binding protein rnp24 - Schizosaccharomyces pombe (Fission| yeast) Length = 369 Score = 35.0 bits (79), Expect = 0.60 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 ++VGNLD T ++++ F G ++ V + K GF F+DF + A+ EL Sbjct: 230 LFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAM-EL 288 Query: 253 DGKNGWRVE 279 G N WR+E Sbjct: 289 -GHNSWRLE 296
>Q9V3G3:PPIE_DROME Peptidyl-prolyl cis-trans isomerase E - Drosophila melanogaster| (Fruit fly) Length = 300 Score = 35.0 bits (79), Expect = 0.60 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSV-----WVARKPPGFAFIDFDETRDAKDAIREL 252 +YVG L T R + + F FG + + + +++ GFAFI+++++ DA AI + Sbjct: 8 IYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNM 67 Query: 253 D 255 + Sbjct: 68 N 68
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 35.0 bits (79), Expect = 0.60 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPP----GFAFIDFDETRDAKDAIRELD 255 +Y+ NLD + + ++F FG + S+ +A+ G+AF++FD DA+ A ++ Sbjct: 203 LYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVN 262 Query: 256 G 258 G Sbjct: 263 G 263 Score = 31.2 bits (69), Expect = 8.6 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVA----RKPPGFAFIDFDETRDAKDAIR 246 ++ +YV N++ T E+ F G + S + K GF F+ F +A DA++ Sbjct: 303 VSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVK 362 Query: 247 ELDGK 261 G+ Sbjct: 363 TFHGQ 367
>Q28ZX3:PABP2_DROPS Polyadenylate-binding protein 2 - Drosophila pseudoobscura (Fruit| fly) Length = 225 Score = 35.0 bits (79), Expect = 0.60 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVA-----RKPPGFAFIDFDETRDAKDAI 243 VYVGN+D A+A E+E F G + V + P GFA+I+F + A+ Sbjct: 98 VYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154
>Q7KNF2:PABP2_DROME Polyadenylate-binding protein 2 - Drosophila melanogaster (Fruit| fly) Length = 224 Score = 35.0 bits (79), Expect = 0.60 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVA-----RKPPGFAFIDFDETRDAKDAI 243 VYVGN+D A+A E+E F G + V + P GFA+I+F + A+ Sbjct: 98 VYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 35.0 bits (79), Expect = 0.60 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV---ARKPPGFAFIDFDETRDAKDAIRELDG 258 +YV NLD + EF FG + S V + GF F+ F +A A+ E++G Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 259 K 261 + Sbjct: 356 R 356 Score = 34.7 bits (78), Expect = 0.78 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV----ARKPPGFAFIDFDETRDAKDAIRELD 255 VY+ N +++ F FG SV V + K GF F+ F+ DA+ A+ E++ Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 256 GK 261 GK Sbjct: 253 GK 254
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 35.0 bits (79), Expect = 0.60 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV---ARKPPGFAFIDFDETRDAKDAIRELDG 258 +YV NLD + EF FG + S V + GF F+ F +A A+ E++G Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 259 K 261 + Sbjct: 356 R 356 Score = 34.7 bits (78), Expect = 0.78 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV----ARKPPGFAFIDFDETRDAKDAIRELD 255 VY+ N +++ F FG SV V + K GF F+ F+ DA+ A+ E++ Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 256 GK 261 GK Sbjct: 253 GK 254
>Q99181:HSH49_YEAST Protein HSH49 - Saccharomyces cerevisiae (Baker's yeast)| Length = 213 Score = 35.0 bits (79), Expect = 0.60 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 5/58 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEF-RVFGVLKSVW----VARKPPGFAFIDFDETRDAKDAIR 246 VYVGN+DPR T ++ + F ++ VL+ + V + G+AFI+F DA+ AI+ Sbjct: 11 VYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIK 68
>P08674:CSP_PLACG Circumsporozoite protein precursor - Plasmodium cynomolgi (strain| Gombak) Length = 401 Score = 34.7 bits (78), Expect = 0.78 Identities = 31/77 (40%), Positives = 34/77 (44%) Frame = -2 Query: 824 AGGGDLLMLLARGGGGDLLMLLARGGGGDLLMLLARGGGGDLLMLRARVGGGDLLMLRPR 645 AGGG A GGGG+ A GGG D A GGGG+ A GG D Sbjct: 103 AGGGGNDGAAAAGGGGNDGAAAAGGGGND--GAAAAGGGGNDGAAAAGGGGND---GAAA 157 Query: 644 AGGGDLLMLRARAGGGD 594 AGGG A GGG+ Sbjct: 158 AGGGGNDGAAAAGGGGN 174 Score = 34.7 bits (78), Expect = 0.78 Identities = 31/77 (40%), Positives = 34/77 (44%) Frame = -2 Query: 824 AGGGDLLMLLARGGGGDLLMLLARGGGGDLLMLLARGGGGDLLMLRARVGGGDLLMLRPR 645 AGGG A GGGG+ A GGG D A GGGG+ A GG D Sbjct: 147 AGGGGNDGAAAAGGGGNDGAAAAGGGGND--GAAAAGGGGNDGAAAAGGGGND---GAAA 201 Query: 644 AGGGDLLMLRARAGGGD 594 AGGG A GGG+ Sbjct: 202 AGGGGNDGAAAAGGGGN 218 Score = 33.5 bits (75), Expect = 1.7 Identities = 31/77 (40%), Positives = 34/77 (44%) Frame = -2 Query: 824 AGGGDLLMLLARGGGGDLLMLLARGGGGDLLMLLARGGGGDLLMLRARVGGGDLLMLRPR 645 AGGG A GGGG+ A GGG D A GGGG+ A GG D Sbjct: 180 AGGGGNDGAAAAGGGGNDGAAAAGGGGND--GAAAAGGGGNGGAAAAGGGGND----GAA 233 Query: 644 AGGGDLLMLRARAGGGD 594 A GG A AGGG+ Sbjct: 234 AAGGGGNDGAAAAGGGN 250 Score = 33.1 bits (74), Expect = 2.3 Identities = 29/76 (38%), Positives = 32/76 (42%) Frame = -2 Query: 821 GGGDLLMLLARGGGGDLLMLLARGGGGDLLMLLARGGGGDLLMLRARVGGGDLLMLRPRA 642 GGG+ A GGG D A GGGG+ A GGG D A GGG Sbjct: 138 GGGNDGAAAAGGGGND--GAAAAGGGGNDGAAAAGGGGND---GAAAAGGGGNDGAAAAG 192 Query: 641 GGGDLLMLRARAGGGD 594 GGG+ A GG D Sbjct: 193 GGGNDGAAAAGGGGND 208 Score = 31.2 bits (69), Expect = 8.6 Identities = 27/67 (40%), Positives = 30/67 (44%) Frame = -2 Query: 794 ARGGGGDLLMLLARGGGGDLLMLLARGGGGDLLMLRARVGGGDLLMLRPRAGGGDLLMLR 615 A GGGG+ A GGG D A GGGG+ A GG D AGGG Sbjct: 102 AAGGGGNDGAAAAGGGGND--GAAAAGGGGNDGAAAAGGGGND---GAAAAGGGGNDGAA 156 Query: 614 ARAGGGD 594 A GGG+ Sbjct: 157 AAGGGGN 163 Score = 31.2 bits (69), Expect = 8.6 Identities = 30/77 (38%), Positives = 33/77 (42%) Frame = -2 Query: 824 AGGGDLLMLLARGGGGDLLMLLARGGGGDLLMLLARGGGGDLLMLRARVGGGDLLMLRPR 645 AGGG A GGGG+ A GGG D G GG A GGG Sbjct: 213 AGGGGNGGAAAAGGGGNDGAAAAGGGGNDGAAAAGGGNGG------AAAGGGG--NGGAA 264 Query: 644 AGGGDLLMLRARAGGGD 594 AGGG+ A AGGG+ Sbjct: 265 AGGGN---GGAAAGGGN 278
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 34.7 bits (78), Expect = 0.78 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIRE 249 +++VG L+ + +ED F FG + V V + + GF FI F A A+R Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66 Query: 250 LDGKN 264 ++G++ Sbjct: 67 MNGES 71
>Q8ITY4:PM14_CAEEL Pre-mRNA branch site p14-like protein - Caenorhabditis elegans| Length = 138 Score = 34.7 bits (78), Expect = 0.78 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVAR--KPPGFAFIDFDETRDAKDAIRELDGK 261 +Y+ NL + T E+ + F FG ++ + V + G AF+ +++ DAK A L G Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAKTACEHLSGY 80 Query: 262 N 264 N Sbjct: 81 N 81
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 34.7 bits (78), Expect = 0.78 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV---ARKPPGFAFIDFDETRDAKDAIRELDG 258 +YV NLD + EF FG + S V + GF F+ F +A A+ E++G Sbjct: 296 LYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 259 K 261 + Sbjct: 356 R 356 Score = 34.3 bits (77), Expect = 1.0 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVAR----KPPGFAFIDFDETRDAKDAIRELD 255 VY+ N +++ F +G SV V K GF F+ F+ DA+ A+ E++ Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 256 GKN 264 GK+ Sbjct: 253 GKD 255
>P06916:FIRA_PLAFF 300 kDa antigen AG231 - Plasmodium falciparum (isolate FC27 / Papua| New Guinea) Length = 310 Score = 34.3 bits (77), Expect = 1.0 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 4/79 (5%) Frame = +3 Query: 594 VSAACPRTK----HQQVTTACPWAKHQQVTTAYPCTKHQQVTSASSRQKHQQVTTASSCQ 761 V+ +C T+ + VTT P + VTT P T + VT+ + VTT Sbjct: 19 VTGSCGNTRTVTTQESVTTQEPVTIEEPVTTQEPVTIEEPVTTQEPVTIEEPVTTQEPVT 78 Query: 762 KHQQVTTTSSCQKHEQVTT 818 + VTT E VTT Sbjct: 79 TQEPVTTQEPVTTQEPVTT 97 Score = 32.3 bits (72), Expect = 3.9 Identities = 20/65 (30%), Positives = 28/65 (43%) Frame = +3 Query: 552 QQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQVTSASSRQKH 731 + +TT P V+ P T + VTT P + VTT P T + VT+ Sbjct: 33 ESVTTQEPVTIEEPVTTQEPVTIEEPVTTQEPVTIEEPVTTQEPVTTQEPVTTQEPVTTQ 92 Query: 732 QQVTT 746 + VTT Sbjct: 93 EPVTT 97
>Q5SP50:ZCRB1_DANRE Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Danio rerio (Zebrafish) (Brachydanio rerio) Length = 218 Score = 34.3 bits (77), Expect = 1.0 Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 9/109 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVA-----RKPPGFAFIDFDETRDAKDAIREL 252 VYV N+ T ++ +G + V + R G AF+ F + A + R L Sbjct: 12 VYVSNIPFSLTNSDMHKLCSKYGKVVKVTIVKDKHTRMSKGVAFVLFLDRESAYNCSRSL 71 Query: 253 DGKNGW----RVELSTKXXXXXXXXXXXXXXXDMKCYECGESGHFAREC 387 + K + + ++ KCYECGE GH + C Sbjct: 72 NNKQLFGRMVKASIAIDNGRAAEFIRKRNYTDKSKCYECGEEGHLSYAC 120
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 34.3 bits (77), Expect = 1.0 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIRE 249 RVYVGNL +E F G + V + + GF F+ +D +++ ++AI+ Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264 Query: 250 LDG 258 LDG Sbjct: 265 LDG 267
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 34.3 bits (77), Expect = 1.0 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV---ARKPPGFAFIDFDETRDAKDAIRELDG 258 +YV NLD + EF FG + S V + GF F+ F +A A+ E++G Sbjct: 296 LYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 259 K 261 + Sbjct: 356 R 356 Score = 32.7 bits (73), Expect = 3.0 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVAR----KPPGFAFIDFDETRDAKDAIRELD 255 VY+ N +++ F +G SV V K GF F+ F+ DA+ A+ +++ Sbjct: 193 VYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMN 252 Query: 256 GKN 264 GK+ Sbjct: 253 GKD 255
>Q04047:NONA_DROME Protein no-on-transient A - Drosophila melanogaster (Fruit fly)| Length = 700 Score = 34.3 bits (77), Expect = 1.0 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL T E+ + F+ +G + ++ + F F+ D +A+ A R LDG Sbjct: 303 RLYVGNLTNDITDDELREMFKPYGEISEIF-SNLDKNFTFLKVDYHPNAEKAKRALDG 359
>Q6FXP4:MRD1_CANGA Multiple RNA-binding domain-containing protein 1 - Candida glabrata| (Yeast) (Torulopsis glabrata) Length = 861 Score = 34.3 bits (77), Expect = 1.0 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 12/77 (15%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPP----------GFAFIDFDETRDAKD 237 +++ NL+ + T++++ D F+VF V KP GF F++F A Sbjct: 642 IFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLSMGFGFVEFRTKEQATA 701 Query: 238 AIRELDGK--NGWRVEL 282 I +DG +G +++L Sbjct: 702 VISAMDGTVIDGHKIQL 718
>O60812:HNRCL_HUMAN Heterogeneous nuclear ribonucleoprotein C-like 1 - Homo sapiens| (Human) Length = 293 Score = 34.3 bits (77), Expect = 1.0 Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Frame = +1 Query: 82 ARVYVGNLDPRATAR-EIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 +RV++GNL+ + ++E F +G + V + GFAF+ +D+ ++A+ A+ DG Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHK---GFAFVQYDKEKNARAAVAGEDG 72 Query: 259 K 261 + Sbjct: 73 R 73
>P53819:YRF16_YEAST Y' element ATP-dependent helicase protein 1 copy 6 - Saccharomyces| cerevisiae (Baker's yeast) Length = 1859 Score = 33.9 bits (76), Expect = 1.3 Identities = 25/102 (24%), Positives = 34/102 (33%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TTAS + + TTA + TTA Sbjct: 1333 TTTASTNVRTSATTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTA-SINVRTS 1391 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT S + TTT S Sbjct: 1392 ATTTESTNSNTSATTTESTDSNTSATTTESTDSNTSATTTAS 1433 Score = 33.9 bits (76), Expect = 1.3 Identities = 24/102 (23%), Positives = 36/102 (35%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TT S + + + A + TTA + TT + Sbjct: 1345 TTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTASINVR-TSATTTESTNSNTS 1403 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT+S TTT S Sbjct: 1404 ATTTESTDSNTSATTTESTDSNTSATTTASTNSSTNATTTAS 1445
>P53345:YRF13_YEAST Y' element ATP-dependent helicase protein 1 copies 3/7 -| Saccharomyces cerevisiae (Baker's yeast) Length = 1859 Score = 33.9 bits (76), Expect = 1.3 Identities = 25/102 (24%), Positives = 34/102 (33%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TTAS + + TTA + TTA Sbjct: 1333 TTTASTNVRTSATTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTA-SINVRTS 1391 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT S + TTT S Sbjct: 1392 ATTTESTNSNTSATTTESTDSNTSATTTESTDSNTSATTTAS 1433 Score = 33.9 bits (76), Expect = 1.3 Identities = 24/102 (23%), Positives = 36/102 (35%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TT S + + + A + TTA + TT + Sbjct: 1345 TTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTASINVR-TSATTTESTNSNTS 1403 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT+S TTT S Sbjct: 1404 ATTTESTDSNTSATTTESTDSNTSATTTASTNSSTNATTTAS 1445
>P40105:YRF12_YEAST Y' element ATP-dependent helicase protein 1 copy 2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 1681 Score = 33.9 bits (76), Expect = 1.3 Identities = 25/102 (24%), Positives = 34/102 (33%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TTAS + + TTA + TTA Sbjct: 1155 TTTASTNVRTSATTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTA-SINVRTS 1213 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT S + TTT S Sbjct: 1214 ATTTESTNSNTSATTTESTDSNTSATTTESTDSNTSATTTAS 1255 Score = 33.9 bits (76), Expect = 1.3 Identities = 24/102 (23%), Positives = 36/102 (35%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TT S + + + A + TTA + TT + Sbjct: 1167 TTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTASINVR-TSATTTESTNSNTS 1225 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT+S TTT S Sbjct: 1226 ATTTESTDSNTSATTTESTDSNTSATTTASTNSSTNATTTAS 1267
>Q03099:YMN3_YEAST Y' element ATP-dependent helicase YML133C - Saccharomyces cerevisiae| (Baker's yeast) Length = 1374 Score = 33.9 bits (76), Expect = 1.3 Identities = 25/102 (24%), Positives = 34/102 (33%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TTAS + + TTA + TTA Sbjct: 847 TTTASTNVRTSATTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTA-SINVRTS 905 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT S + TTT S Sbjct: 906 ATTTESTNSNTSATTTESTDSNTSATTTESTDSNTSATTTAS 947 Score = 33.9 bits (76), Expect = 1.3 Identities = 24/102 (23%), Positives = 36/102 (35%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TT S + + + A + TTA + TT + Sbjct: 859 TTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTASINVR-TSATTTESTNSNTS 917 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT+S TTT S Sbjct: 918 ATTTESTDSNTSATTTESTDSNTSATTTASTNSSTNATTTAS 959
>Q99208:YL066_YEAST Y' element ATP-dependent helicase YLL066C - Saccharomyces| cerevisiae (Baker's yeast) Length = 1205 Score = 33.9 bits (76), Expect = 1.3 Identities = 25/102 (24%), Positives = 34/102 (33%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TTAS + + TTA + TTA Sbjct: 678 TTTASTNVRTSATTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTA-SINVRTS 736 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT S + TTT S Sbjct: 737 ATTTESTNSNTSATTTESTDSNTSATTTESTDSNTSATTTAS 778 Score = 33.9 bits (76), Expect = 1.3 Identities = 24/102 (23%), Positives = 36/102 (35%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TT S + + + A + TTA + TT + Sbjct: 690 TTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTASINVR-TSATTTESTNSNTS 748 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT+S TTT S Sbjct: 749 ATTTESTDSNTSATTTESTDSNTSATTTASTNSSTNATTTAS 790
>P10863:TIR1_YEAST Cold shock-induced protein TIR1 precursor - Saccharomyces| cerevisiae (Baker's yeast) Length = 254 Score = 33.9 bits (76), Expect = 1.3 Identities = 19/96 (19%), Positives = 45/96 (46%) Frame = +3 Query: 519 PTGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQ 698 PT S + + + ++A+P + + S+A P + + ++A P + + ++A P + Sbjct: 137 PTSSAASSSSEAKSSSAAPSSSEAKSSSAAPSSSEAKSSSAAPSSSEAKSSSAAPSSTEA 196 Query: 699 QVTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHE 806 ++TSA+ + + S Q T + ++ E Sbjct: 197 KITSAAPSSTGAKTSAISQITDGQIQATKAVSEQTE 232
>Q22053:FBRL_CAEEL rRNA 2'-O-methyltransferase fibrillarin - Caenorhabditis elegans| Length = 352 Score = 33.9 bits (76), Expect = 1.3 Identities = 34/82 (41%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Frame = -2 Query: 830 SRAGGGDLLMLLARGG-GGDLLMLLARGGGGDLLMLLARGG--GGDLLMLRARVGGGDLL 660 +R GGG RGG GGD GGG RGG GGD R GGGD Sbjct: 7 NRGGGGGGF----RGGRGGDRGGSRGGFGGG------GRGGYGGGD----RGSFGGGDRG 52 Query: 659 MLRPRAGGGDLLMLRARAGGGD 594 R GGGD R GGGD Sbjct: 53 GFRGGRGGGDRGGFRGGRGGGD 74
>Q96L91:EP400_HUMAN E1A-binding protein p400 - Homo sapiens (Human)| Length = 3160 Score = 33.9 bits (76), Expect = 1.3 Identities = 41/131 (31%), Positives = 51/131 (38%), Gaps = 27/131 (20%) Frame = +3 Query: 516 QPTGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKH----QQVTTAY- 680 Q +V Q+ QQITT P A+ AA P K Q +TT A+ QQV T Sbjct: 2987 QGPAAVQQKITAQQITT--PGAQQKVAYAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQ 3044 Query: 681 ------------PCTKHQQVTSASSRQKHQQVTTASSCQKHQQV----TTTSSCQK---- 800 P QQV SAS + Q V + QQV T++ Q Sbjct: 3045 VAKLPQVVQQQTPVASIQQVASASQQASPQTVALTQATAAGQQVQMIPAVTATAQVVQQK 3104 Query: 801 --HEQVTTTCS 827 +QV TT S Sbjct: 3105 LIQQQVVTTAS 3115
>Q5R7X2:SR140_PONPY U2-associated protein SR140 - Pongo pygmaeus (Orangutan)| Length = 1028 Score = 33.9 bits (76), Expect = 1.3 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVA--------RKPPGFAFIDFDETRDAKDAI 243 +Y+GN++P+ + EF FG L SV + + F+ F RDA+ A+ Sbjct: 275 LYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERAL 334 Query: 244 RELDGK 261 + L+GK Sbjct: 335 KNLNGK 340
>Q6NV83:SR140_MOUSE U2-associated protein SR140 - Mus musculus (Mouse)| Length = 1029 Score = 33.9 bits (76), Expect = 1.3 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVA--------RKPPGFAFIDFDETRDAKDAI 243 +Y+GN++P+ + EF FG L SV + + F+ F RDA+ A+ Sbjct: 276 LYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMSRRDAERAL 335 Query: 244 RELDGK 261 + L+GK Sbjct: 336 KNLNGK 341
>O15042:SR140_HUMAN U2-associated protein SR140 - Homo sapiens (Human)| Length = 1029 Score = 33.9 bits (76), Expect = 1.3 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVA--------RKPPGFAFIDFDETRDAKDAI 243 +Y+GN++P+ + EF FG L SV + + F+ F RDA+ A+ Sbjct: 276 LYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERAL 335 Query: 244 RELDGK 261 + L+GK Sbjct: 336 KNLNGK 341
>Q08473:SQD_DROME RNA-binding protein squid - Drosophila melanogaster (Fruit fly)| Length = 344 Score = 33.9 bits (76), Expect = 1.3 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPP-----GFAFIDFDETRDAKDAIRE 249 +++VG L T +E+ D F +G ++S+ V P GFAFI F T +A D + Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNT-EAIDKVSA 115 Query: 250 LD 255 D Sbjct: 116 AD 117
>Q5REG1:SART3_PONPY Squamous cell carcinoma antigen recognized by T-cells 3 - Pongo| pygmaeus (Orangutan) Length = 981 Score = 33.9 bits (76), Expect = 1.3 Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV----ARKPPGFAFIDFDETRDAKDAIREL 252 ++++ L T E+E+ + G +K + + A KP G A+++++ A A+ ++ Sbjct: 820 KLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKM 879 Query: 253 DG 258 DG Sbjct: 880 DG 881
>Q15020:SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 - Homo| sapiens (Human) Length = 963 Score = 33.9 bits (76), Expect = 1.3 Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWV----ARKPPGFAFIDFDETRDAKDAIREL 252 ++++ L T E+E+ + G +K + + A KP G A+++++ A A+ ++ Sbjct: 802 KLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKM 861 Query: 253 DG 258 DG Sbjct: 862 DG 863
>Q6AYK1:RNPS1_RAT RNA-binding protein with serine-rich domain 1 - Rattus norvegicus| (Rat) Length = 305 Score = 33.9 bits (76), Expect = 1.3 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 6/64 (9%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVW--VARKPP----GFAFIDFDETRDAKDAIR 246 +V++G L T I + F +G +K + V R P G+A+++F+ +A+ A++ Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALK 221 Query: 247 ELDG 258 +DG Sbjct: 222 HMDG 225
>Q5NVM8:RNPS1_PONPY RNA-binding protein with serine-rich domain 1 - Pongo pygmaeus| (Orangutan) Length = 305 Score = 33.9 bits (76), Expect = 1.3 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 6/64 (9%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVW--VARKPP----GFAFIDFDETRDAKDAIR 246 +V++G L T I + F +G +K + V R P G+A+++F+ +A+ A++ Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALK 221 Query: 247 ELDG 258 +DG Sbjct: 222 HMDG 225
>Q99M28:RNPS1_MOUSE RNA-binding protein with serine-rich domain 1 - Mus musculus| (Mouse) Length = 305 Score = 33.9 bits (76), Expect = 1.3 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 6/64 (9%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVW--VARKPP----GFAFIDFDETRDAKDAIR 246 +V++G L T I + F +G +K + V R P G+A+++F+ +A+ A++ Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALK 221 Query: 247 ELDG 258 +DG Sbjct: 222 HMDG 225
>Q4R5N1:RNPS1_MACFA RNA-binding protein with serine-rich domain 1 - Macaca fascicularis| (Crab eating macaque) (Cynomolgus monkey) Length = 305 Score = 33.9 bits (76), Expect = 1.3 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 6/64 (9%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVW--VARKPP----GFAFIDFDETRDAKDAIR 246 +V++G L T I + F +G +K + V R P G+A+++F+ +A+ A++ Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALK 221 Query: 247 ELDG 258 +DG Sbjct: 222 HMDG 225
>Q15287:RNPS1_HUMAN RNA-binding protein with serine-rich domain 1 - Homo sapiens| (Human) Length = 305 Score = 33.9 bits (76), Expect = 1.3 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 6/64 (9%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVW--VARKPP----GFAFIDFDETRDAKDAIR 246 +V++G L T I + F +G +K + V R P G+A+++F+ +A+ A++ Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALK 221 Query: 247 ELDG 258 +DG Sbjct: 222 HMDG 225
>Q9WX39:RBPF_ANASP Putative RNA-binding protein rbpF - Anabaena sp. (strain PCC 7120)| Length = 105 Score = 33.9 bits (76), Expect = 1.3 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 +YVGNL T +I + F +G +K V + + GFAF++ + AI L Sbjct: 3 IYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEGL 62 Query: 253 DG 258 DG Sbjct: 63 DG 64
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 33.9 bits (76), Expect = 1.3 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVW-----VARKPPGFAFIDFDETRDAKDAIR 246 A +YVG+LDP T + +FR G L+ V R P G+ +++F DA+ A+ Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 247 ELD 255 ++ Sbjct: 78 TMN 80 Score = 32.0 bits (71), Expect = 5.1 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVL---KSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 +Y+ NLD ++++EF FG + K + + GF + F +A A+ E++G Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363 Query: 259 K 261 + Sbjct: 364 R 364
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 33.9 bits (76), Expect = 1.3 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVW-----VARKPPGFAFIDFDETRDAKDAIR 246 A +YVG+LDP T + +FR G L+ V R P G+ +++F DA+ A+ Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 247 ELD 255 ++ Sbjct: 78 TMN 80 Score = 32.0 bits (71), Expect = 5.1 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVL---KSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 +Y+ NLD ++++EF FG + K + + GF + F +A A+ E++G Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363 Query: 259 K 261 + Sbjct: 364 R 364
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 33.9 bits (76), Expect = 1.3 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVW-----VARKPPGFAFIDFDETRDAKDAIR 246 A +YVG+LDP T + +FR G L+ V R P G+ +++F DA+ A+ Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 247 ELD 255 ++ Sbjct: 78 TMN 80 Score = 32.0 bits (71), Expect = 5.1 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVL---KSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 +Y+ NLD ++++EF FG + K + + GF + F +A A+ E++G Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363 Query: 259 K 261 + Sbjct: 364 R 364
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 33.9 bits (76), Expect = 1.3 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVW-----VARKPPGFAFIDFDETRDAKDAIR 246 A +YVG+LDP T + +FR G L+ V R P G+ +++F DA+ A+ Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 247 ELD 255 ++ Sbjct: 78 TMN 80 Score = 32.0 bits (71), Expect = 5.1 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVL---KSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 +Y+ NLD ++++EF FG + K + + GF + F +A A+ E++G Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363 Query: 259 K 261 + Sbjct: 364 R 364
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 33.9 bits (76), Expect = 1.3 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVW-----VARKPPGFAFIDFDETRDAKDAIR 246 A +YVG+LDP T + +FR G L+ V R P G+ +++F DA+ A+ Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 247 ELD 255 ++ Sbjct: 78 TMN 80 Score = 32.0 bits (71), Expect = 5.1 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVL---KSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 +Y+ NLD ++++EF FG + K + + GF + F +A A+ E++G Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363 Query: 259 K 261 + Sbjct: 364 R 364
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 33.9 bits (76), Expect = 1.3 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVW-----VARKPPGFAFIDFDETRDAKDAIR 246 A +YVG+LDP T + +FR G L+ V R P G+ +++F DA+ A+ Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 247 ELD 255 ++ Sbjct: 78 TMN 80 Score = 32.0 bits (71), Expect = 5.1 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVL---KSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 +Y+ NLD ++++EF FG + K + + GF + F +A A+ E++G Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363 Query: 259 K 261 + Sbjct: 364 R 364
>O14327:PAB2_SCHPO Polyadenylate-binding protein 2 - Schizosaccharomyces pombe| (Fission yeast) Length = 166 Score = 33.9 bits (76), Expect = 1.3 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDE 219 VYVGN+D T E++ F G + V + P GFA+I+F E Sbjct: 57 VYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSE 105
>Q9GRW7:NONA_DROVI Protein no-on-transient A - Drosophila virilis (Fruit fly)| Length = 697 Score = 33.9 bits (76), Expect = 1.3 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL T E+ + F+ +G + ++ + F F+ D +A+ A R LDG Sbjct: 286 RLYVGNLTNDITDEELREMFKPYGEIGEIF-SNLEKNFTFLKVDYHINAEKAKRPLDG 342
>Q9GRX4:NONA_DROLR Protein no-on-transient A - Drosophila littoralis (Fruit fly)| Length = 698 Score = 33.9 bits (76), Expect = 1.3 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 R+YVGNL T E+ + F+ +G + ++ + F F+ D +A+ A R LDG Sbjct: 282 RLYVGNLTNDITDEELREMFKPYGEIGEIF-SNLEKNFTFLKVDYHINAEKAKRALDG 338
>Q19706:IF34_CAEEL Probable eukaryotic translation initiation factor 3 subunit 4 -| Caenorhabditis elegans Length = 256 Score = 33.9 bits (76), Expect = 1.3 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 5/59 (8%) Frame = +1 Query: 94 VGNLDPRATAREIEDEFRVFGVLKSVWVARK-----PPGFAFIDFDETRDAKDAIRELD 255 V NL E+ D F G + +++AR P GFAF+ F+ DA AI EL+ Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>Q5SF07:IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 - Mus musculus| (Mouse) Length = 592 Score = 33.9 bits (76), Expect = 1.3 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 76 VMARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD 255 +M ++Y+GNL P TA ++ F + + V K G+AF+D+ + A AI L Sbjct: 1 MMNKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLKS-GYAFVDYPDQNWAIRAIETLS 59 Query: 256 GK 261 GK Sbjct: 60 GK 61
>Q9Y6M1:IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 - Homo sapiens| (Human) Length = 556 Score = 33.9 bits (76), Expect = 1.3 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 76 VMARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELD 255 +M ++Y+GNL P TA ++ F + + V K G+AF+D+ + A AI L Sbjct: 1 MMNKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLKS-GYAFVDYPDQNWAIRAIETLS 59 Query: 256 GK 261 GK Sbjct: 60 GK 61
>P35955:GAG_VILVK Gag polyprotein [Contains: Core protein p16; Core protein p25; Core| protein p14] - Maedi visna virus (strain KV1772) (MVV) (Visna lentivirus) Length = 442 Score = 33.9 bits (76), Expect = 1.3 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 337 DMKCYECGESGHFARECR 390 + KCY CG+ GH AR+CR Sbjct: 384 NQKCYNCGKPGHLARQCR 401
>P23425:GAG_VILV2 Gag polyprotein [Contains: Core protein p16; Core protein p25; Core| protein p14] - Maedi visna virus (strain 1514 / clone LV1-1KS2) (MVV) (Visna lentivirus) Length = 442 Score = 33.9 bits (76), Expect = 1.3 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 337 DMKCYECGESGHFARECR 390 + KCY CG+ GH AR+CR Sbjct: 384 NQKCYNCGKPGHLARQCR 401
>P23424:GAG_VILV1 Gag polyprotein [Contains: Core protein p16; Core protein p25; Core| protein p14] - Maedi visna virus (strain 1514 / clone LV1-1KS1) (MVV) (Visna lentivirus) Length = 442 Score = 33.9 bits (76), Expect = 1.3 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 337 DMKCYECGESGHFARECR 390 + KCY CG+ GH AR+CR Sbjct: 384 NQKCYNCGKPGHLARQCR 401
>P03352:GAG_VILV Gag polyprotein [Contains: Core protein p16; Core protein p25; Core| protein p14] - Maedi visna virus (strain 1514) (MVV) (Visna lentivirus) Length = 442 Score = 33.9 bits (76), Expect = 1.3 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 337 DMKCYECGESGHFARECR 390 + KCY CG+ GH AR+CR Sbjct: 384 NQKCYNCGKPGHLARQCR 401
>A0JM51:CELF5_XENTR CUG-BP- and ETR-3-like factor 5 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 486 Score = 33.9 bits (76), Expect = 1.3 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKP----PGFAFIDFDETRDAKDAIREL 252 +++VG L + + E+ F+ FG ++ V R P G AF+ F +A+ AI+ L Sbjct: 136 KLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQAL 195 Query: 253 DG 258 G Sbjct: 196 HG 197
>P40889:YJW5_YEAST Y' element ATP-dependent helicase YJL225C - Saccharomyces cerevisiae| (Baker's yeast) Length = 1758 Score = 33.5 bits (75), Expect = 1.7 Identities = 27/102 (26%), Positives = 34/102 (33%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S A T AS A + + A + TTA + TTA Sbjct: 1148 TTNASTNATTNASTNASTNATTNASTNATTNSSTNATTTASTNVRTSATTTA-SINVRTS 1206 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S TT S TTT S + TTT S Sbjct: 1207 ATTTESTNSSTNATTTESTNSSTNATTTESTNSNTSATTTAS 1248
>P40434:YIR7_YEAST Y' element ATP-dependent helicase YIL177C - Saccharomyces cerevisiae| (Baker's yeast) Length = 1758 Score = 33.5 bits (75), Expect = 1.7 Identities = 27/102 (26%), Positives = 34/102 (33%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S A T AS A + + A + TTA + TTA Sbjct: 1148 TTNASTNATTNASTNASTNATTNASTNATTNSSTNATTTASTNVRTSATTTA-SINVRTS 1206 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S TT S TTT S + TTT S Sbjct: 1207 ATTTESTNSSTNATTTESTNSSTNATTTESTNSNTSATTTAS 1248
>Q7M4S9:YB113_YEAST Uncharacterized protein YBL113C - Saccharomyces cerevisiae (Baker's| yeast) Length = 792 Score = 33.5 bits (75), Expect = 1.7 Identities = 24/102 (23%), Positives = 35/102 (34%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + T A+ + + + A + TTA + TTA Sbjct: 229 TTTASTNVRTSATTNATTNSSTNATTTASTNVRTSATTTASTNVRTSATTTA-SINVRTS 287 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S TT S + TTT S + TTT S Sbjct: 288 ATTTESINSSTNATTTESTNSNTSATTTESTDSNTNATTTAS 329 Score = 31.2 bits (69), Expect = 8.6 Identities = 23/100 (23%), Positives = 33/100 (33%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + + + TTAS + A + TTA + TT Sbjct: 241 TTNATTNSSTNATTTASTNVRTSATTTASTNVRTSATTTASINVR-TSATTTESINSSTN 299 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTT 821 T+ S + TT S + TTT+S TTT Sbjct: 300 ATTTESTNSNTSATTTESTDSNTNATTTASINVRTSATTT 339
>Q9W4E2:NBEA_DROME Protein neurobeachin - Drosophila melanogaster (Fruit fly)| Length = 3584 Score = 33.5 bits (75), Expect = 1.7 Identities = 25/86 (29%), Positives = 35/86 (40%) Frame = +3 Query: 552 QQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQVTSASSRQKH 731 QQ + HH +A + +HQQV A QQ + P H +SASS Sbjct: 2032 QQQQVVHNHSHHHMTAAYYQQQQHQQV------AAGQQQHSPTPLATHSTSSSASSTATS 2085 Query: 732 QQVTTASSCQKHQQVTTTSSCQKHEQ 809 Q +++S Q S Q H+Q Sbjct: 2086 QPASSSSLSSLASQSQQQSHRQLHKQ 2111
>Q8SX83:SPEN_DROME Protein split ends - Drosophila melanogaster (Fruit fly)| Length = 5560 Score = 33.5 bits (75), Expect = 1.7 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARKP-PGFAFIDFDETRDAKDAIRELDGKN 264 +++GNL+ TA E+ F FG + + + ++ +AF + + A+R++DG++ Sbjct: 658 LFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 717
>Q44560:RBPA_ANASP Putative RNA-binding protein rbpA - Anabaena sp. (strain PCC 7120)| Length = 102 Score = 33.5 bits (75), Expect = 1.7 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAIREL 252 +YVGNL T + F +G +K V + +P GF F++ + AI L Sbjct: 3 IYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEAL 62 Query: 253 DG 258 DG Sbjct: 63 DG 64
>P40565:IST3_YEAST U2 snRNP component IST3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 148 Score = 33.5 bits (75), Expect = 1.7 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 5/70 (7%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVWVAR-----KPPGFAFIDFDETRDAKDAIR 246 A +Y+GNL+ T +I F +GV V ++R + GFA++ ++ D + I Sbjct: 31 AYIYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYE---DQRSTIL 87 Query: 247 ELDGKNGWRV 276 +D NG+++ Sbjct: 88 AVDNLNGFKI 97
>Q9PW80:IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 - Danio rerio| (Zebrafish) (Brachydanio rerio) Length = 582 Score = 33.5 bits (75), Expect = 1.7 Identities = 20/61 (32%), Positives = 34/61 (55%) Frame = +1 Query: 79 MARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 M ++Y+GN+ +A+A ++E F + + S K G+AF+D + + A AI L G Sbjct: 1 MNKLYIGNVSEQASALDLESIFEQWKIPFSAPFLVKS-GYAFVDCPDEKVAMRAIDTLSG 59 Query: 259 K 261 K Sbjct: 60 K 60
>Q5RB68:IF2B2_PONPY Insulin-like growth factor 2 mRNA-binding protein 2 - Pongo| pygmaeus (Orangutan) Length = 556 Score = 33.5 bits (75), Expect = 1.7 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Frame = +1 Query: 76 VMARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARK--PPGFAFIDFDETRDAKDAIRE 249 +M ++Y+GNL P T ++D ++FG K + G+AF+D+ + A AI Sbjct: 1 MMNKLYIGNLSPAVT---VDDLRQLFGDRKLPLAGQVLLKSGYAFVDYPDQNWAIRAIET 57 Query: 250 LDGK 261 L GK Sbjct: 58 LSGK 61
>O43390:HNRPR_HUMAN Heterogeneous nuclear ribonucleoprotein R - Homo sapiens (Human)| Length = 633 Score = 33.5 bits (75), Expect = 1.7 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +1 Query: 76 VMARV---YVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIR 246 VMA+V +V NL T +E F FG L+ V +K +AF+ F++ A A+ Sbjct: 336 VMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERV---KKLKDYAFVHFEDRGAAVKAMD 392 Query: 247 ELDGK 261 E++GK Sbjct: 393 EMNGK 397
>Q08995:YP204_YEAST Y' element ATP-dependent helicase YPR204W - Saccharomyces| cerevisiae (Baker's yeast) Length = 1032 Score = 33.1 bits (74), Expect = 2.3 Identities = 25/102 (24%), Positives = 33/102 (32%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TTAS + + TTA + TTA Sbjct: 470 TTTASTNVRTSATTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTA-SINVRTS 528 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT S TTT S Sbjct: 529 ATTTESTNSNTSATTTESTDSNTSATTTESTNSSTNATTTAS 570 Score = 31.2 bits (69), Expect = 8.6 Identities = 23/100 (23%), Positives = 34/100 (34%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TT S + + + A + TTA + TT + Sbjct: 482 TTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTASINVR-TSATTTESTNSNTS 540 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTT 821 T+ S + TT S TTT+S TTT Sbjct: 541 ATTTESTDSNTSATTTESTNSSTNATTTASINVRTSATTT 580
>Q07888:YL067_YEAST Y' element ATP-dependent helicase YLL067C - Saccharomyces| cerevisiae (Baker's yeast) Length = 1205 Score = 33.1 bits (74), Expect = 2.3 Identities = 25/102 (24%), Positives = 33/102 (32%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TTAS + + TTA + TTA Sbjct: 678 TTTASTNVRTSATTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTA-SINVRTS 736 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S + TT S + TTT S TTT S Sbjct: 737 ATTTESTNSNTSATTTESTDSNTSATTTESTDSSTNATTTAS 778 Score = 31.2 bits (69), Expect = 8.6 Identities = 23/100 (23%), Positives = 34/100 (34%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TT S + + + A + TTA + TT + Sbjct: 690 TTTASINVRTSATTTESTNSSTNATTTASTNVRTSATTTASINVR-TSATTTESTNSNTS 748 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTT 821 T+ S + TT S TTT+S TTT Sbjct: 749 ATTTESTDSNTSATTTESTDSSTNATTTASINVRTSATTT 788
>Q3E7X8:YE077_YEAST Y' element ATP-dependent helicase YEL077C - Saccharomyces cerevisiae| (Baker's yeast) Length = 1277 Score = 33.1 bits (74), Expect = 2.3 Identities = 26/102 (25%), Positives = 38/102 (37%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 T + S + TT S + + + TT +K TTA + Sbjct: 762 TTTASINVRTSATTTKSINSSTNATITESTNSNTNATTTESTNSKTSATTTASTNSNTSA 821 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+ S+ K TTAS+ + TTT S + TTT S Sbjct: 822 TTTESTNSKTSATTTAST-NSNTSATTTESTNSNTSATTTAS 862 Score = 32.0 bits (71), Expect = 5.0 Identities = 27/102 (26%), Positives = 36/102 (35%) Frame = +3 Query: 522 TGSVSQEAKLQQITTASPRAEHHQVSAACPRTKHQQVTTACPWAKHQQVTTAYPCTKHQQ 701 + + S A ITTAS + + A T A + TTA + Sbjct: 678 SANASTNASTNAITTASTNVRTNATTNASTNATTNASTNATTNSSTNATTTASTNVRTSA 737 Query: 702 VTSASSRQKHQQVTTASSCQKHQQVTTTSSCQKHEQVTTTCS 827 T+AS + TT S TTT+S TTT S Sbjct: 738 TTTASINVR-TSATTTESTNSSTNATTTASINVRTSATTTKS 778
>Q5XG24:RNPS1_XENLA RNA-binding protein with serine-rich domain 1 - Xenopus laevis| (African clawed frog) Length = 283 Score = 33.1 bits (74), Expect = 2.3 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 6/64 (9%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFGVLKSVW--VARKPP----GFAFIDFDETRDAKDAIR 246 +V++G L T I + F +G +K + V R P G+A+++F+ +A+ A++ Sbjct: 139 KVHIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALK 198 Query: 247 ELDG 258 +DG Sbjct: 199 HMDG 202
>P38996:NAB3_YEAST Nuclear polyadenylated RNA-binding protein 3 - Saccharomyces| cerevisiae (Baker's yeast) Length = 802 Score = 33.1 bits (74), Expect = 2.3 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAI 243 +R+++GNL + ++E D FR+F + F FI FD + +DAI Sbjct: 330 SRLFIGNLPLKNVSKE--DLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAI 381
>P19600:HNRPC_XENLA Heterogeneous nuclear ribonucleoprotein C - Xenopus laevis (African| clawed frog) Length = 282 Score = 33.1 bits (74), Expect = 2.3 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +1 Query: 82 ARVYVGNLDPRATAR-EIEDEFRVFGVLKSVWVARKPPGFAFIDFDETRDAKDAIRELDG 258 +RV++GNL+ + ++E F +G + V + GFAF+ F R A+ A+ DG Sbjct: 17 SRVFIGNLNTLVVKKTDVEAIFSKYGKIVGCSVHK---GFAFVQFSNERTARTAVAGEDG 73 Query: 259 K 261 + Sbjct: 74 R 74
>Q5XFR0:EPAB2_MOUSE Embryonic polyadenylate-binding protein 2 - Mus musculus (Mouse)| Length = 273 Score = 33.1 bits (74), Expect = 2.3 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWV-----ARKPPGFAFIDFDETRDAKDAI 243 V+VGN+D +A E+E F G + V + + P G+A+I+F R K A+ Sbjct: 145 VFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVKAAV 201
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 33.1 bits (74), Expect = 2.3 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Frame = +1 Query: 82 ARVYVGNLDPRATAREIEDEFRVFG-VLKSVWVARKPPGF----AFIDFDETRDAKDAIR 246 A +Y+ L T +++ED F FG ++ S + + G AFI FD+ +A++AI Sbjct: 106 ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAIT 165 Query: 247 ELDG 258 +G Sbjct: 166 SFNG 169
>Q9WU42:NCOR2_MOUSE Nuclear receptor corepressor 2 - Mus musculus (Mouse)| Length = 2472 Score = 32.7 bits (73), Expect = 3.0 Identities = 31/125 (24%), Positives = 48/125 (38%) Frame = +2 Query: 524 GIGLPGSEVTADHHRLPARGASPGLRRLPAHEASAGHHRLPVGEASTGHHRLPVHEASAG 703 G+ P E+ H R PG +L A A H R LP + S+ Sbjct: 2024 GLSKPLEELEKSHLEGELRHKQPGPMKLSAEAAHLPHLR-----------PLPESQPSSS 2072 Query: 704 HLRLLAPEASAGHHRLLVPEASAGHHHLLVPEA*ASHHHLLVNRAIAGPLHSHPSVRSPL 883 L AP GH R++ A H ++ + HH ++ + PL+S P P+ Sbjct: 2073 PLLQTAPGIK-GHQRVVT---LAQHISEVITQDYTRHHPQQLSGPLPAPLYSFPGASCPV 2128 Query: 884 MLITR 898 + + R Sbjct: 2129 LDLRR 2133
>Q05196:PABP5_ARATH Polyadenylate-binding protein 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 668 Score = 32.7 bits (73), Expect = 3.0 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVAR----KPPGFAFIDFDETRDAKDAIRELD 255 V++ NLD + + + F FG + S VA + G+ F+ F++ A+ AI +L+ Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 193 Query: 256 G 258 G Sbjct: 194 G 194
>Q05966:GRP10_BRANA Glycine-rich RNA-binding protein 10 - Brassica napus (Rape)| Length = 169 Score = 32.7 bits (73), Expect = 3.0 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = +1 Query: 85 RVYVGNLDPRATAREIEDEFRVFG-VLKSVWV----ARKPPGFAFIDFDETRDAKDAIRE 249 R +VG L E+E F FG V+ S + + GF F+ F + + KDAI E Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66 Query: 250 LDGK 261 ++GK Sbjct: 67 MNGK 70
>P16900:GAG_OMVVS Gag polyprotein [Contains: Core protein p16; Core protein p25; Core| protein p14] - Ovine maedi visna related virus (strain South Africa) (SA-OMVV) (Ovine lentivirus) Length = 446 Score = 32.7 bits (73), Expect = 3.0 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 343 KCYECGESGHFARECR 390 KCY CG+ GH AR+CR Sbjct: 385 KCYYCGKPGHLARQCR 400
>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 629 Score = 32.7 bits (73), Expect = 3.0 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Frame = +1 Query: 88 VYVGNLDPRATAREIEDEFRVFGVLKSVWVARK---PPGFAFIDFDETRDAKDAIRELDG 258 +YV NLD + EF +G + S V + GF F+ F +A A+ E++G Sbjct: 296 LYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 259 K 261 + Sbjct: 356 R 356 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 202,357,440 Number of extensions: 4868739 Number of successful extensions: 17459 Number of sequences better than 10.0: 368 Number of HSP's gapped: 16834 Number of HSP's successfully gapped: 457 Length of query: 390 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 275 Effective length of database: 69,142,514 Effective search space: 19014191350 Effective search space used: 19014191350 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
