Clone Name | FLbaf89m14 |
---|---|
Clone Library Name | barley_pub |
>gb|AY104880.1| Zea mays PCO074406 mRNA sequence Length = 1306 Score = 333 bits (168), Expect = 8e-88 Identities = 362/425 (85%), Gaps = 10/425 (2%) Strand = Plus / Plus Query: 77 tcatggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgagg 136 ||||||||||||||||||| ||||| ||||||||||| | ||| ||||| |||||||||| Sbjct: 207 tcatggctcgcgtctacgttgggaacctggatccgcgtgtcacggcgcgggagatcgagg 266 Query: 137 acgagttccgcgtgtttggggttctcaagagtgtgtgggttgctagaaagccaccaggat 196 |||||||||| ||||||||||||| | |||||| ||||||||||| || |||||||| | Sbjct: 267 acgagttccggatgtttggggttctgaggagtgtatgggttgctaggaaaccaccagggt 326 Query: 197 ttgctttcatcgacttcgatgagaccagggacgcaaaggatgcaattcgtgaattggatg 256 |||| ||||| ||||| ||||| |||| | ||| | ||||| |||||||||||||||| Sbjct: 327 ttgccttcattgactttgatgaccgcagg-atgcacaagatgccattcgtgaattggatg 385 Query: 257 gtaagaatgggtggagagttgagctgtcaaccaaatctggcagtggccgtggccgagaac 316 |||||||||| ||||| |||||||||||||| ||| ||| |||||||||||||||| | Sbjct: 386 gtaagaatggttggagggttgagctgtcaactaaagttggtggtggccgtggccgagacc 445 Query: 317 gtgaacgctctggaggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttg 376 || |||| |||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 446 gt-aacg--------gttctgatatgaagtgctatgagtgtggtgaagctggccactttg 496 Query: 377 cacgagaatgtcgcctacggattggttctgggggcctgggtagcggaagacgccgcagcc 436 |||| ||||| ||| ||||||||||||| || ||| ||||||| ||||| || ||||||| Sbjct: 497 cacgtgaatgccgcttacggattggttcaggaggcttgggtagtggaaggcgtcgcagcc 556 Query: 437 gaagcccgaggcaccgcagccgcagccgtagccgtagcccaagataccgcaggagcccaa 496 |||| || || | |||||||||||||| ||||| ||||||||||| || |||||||||| Sbjct: 557 gaagtcctagatatcgcagccgcagccgcagccgcagcccaagatatcgaaggagcccaa 616 Query: 497 gctat 501 ||||| Sbjct: 617 gctat 621
>emb|CT833412.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA025N11, full insert sequence Length = 992 Score = 315 bits (159), Expect = 2e-82 Identities = 314/366 (85%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 77 tcatggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgagg 136 ||||||||||||| ||||||||||| ||||||||||||| || ||||| |||||||||| Sbjct: 123 tcatggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgagg 182 Query: 137 acgagttccgcgtgtttggggttctcaagagtgtgtgggttgctagaaagccaccaggat 196 ||||||||||||||||||||||||| | |||||| |||||||||||||| |||||||| | Sbjct: 183 acgagttccgcgtgtttggggttctgaggagtgtatgggttgctagaaaaccaccaggtt 242 Query: 197 ttgctttcatcgacttcgatgagaccagggacgcaaaggatgcaattcgtgaattggatg 256 |||| || || ||||| ||||| |||||| ||| | |||||||||||||| || |||| Sbjct: 243 ttgcctttattgactttgatgaccgcagggatgcagaagatgcaattcgtgatttagatg 302 Query: 257 gtaagaatgggtggagagttgagctgtcaaccaaatctggcagtggccgtggccgagaac 316 | |||||||| ||||| |||||||||||||||||| |||| ||||| ||||||||||| | Sbjct: 303 gcaagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatc 362 Query: 317 gtgaacgctctggaggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttg 376 || || || |||||||| |||||||||||||| ||||| ||| |||||| |||| Sbjct: 363 gt------tccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttg 416 Query: 377 cacgagaatgtcgcctacggattggttctgggggcctgggtagcggaagacgccgcagcc 436 |||| ||||| ||| |||||||||||||||| ||||| || || |||||||||||||||| Sbjct: 417 cacgtgaatgccgcttacggattggttctggaggccttggcagtggaagacgccgcagcc 476 Query: 437 gaagcc 442 | |||| Sbjct: 477 gcagcc 482 Score = 113 bits (57), Expect = 1e-21 Identities = 90/101 (89%) Strand = Plus / Plus Query: 466 agccgtagcccaagataccgcaggagcccaagctatggtagaaggagctacagcccacgg 525 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 518 agccgcagcccaagataccggaggagcccaagctatggtagaaggagttacagcccacgg 577 Query: 526 gatcggtctcccaggaagcgaagttacagcagatcaccacc 566 ||||| ||||| | || ||| || |||||||| || ||||| Sbjct: 578 gatcgttctccaaagaggcgcagctacagcaggtcgccacc 618 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Plus Query: 450 ccgcagccgcagccgtagccgtagcccaagataccgc 486 ||||||||||||||||||||| || ||||| |||||| Sbjct: 469 ccgcagccgcagccgtagccggagtccaaggtaccgc 505 Score = 48.1 bits (24), Expect = 0.072 Identities = 72/88 (81%) Strand = Plus / Plus Query: 811 tcaccaccacctgctcgtgaacagagctatagcaggtcccctgcacagccaccccagcgt 870 ||||| |||||| ||||||| | ||||| ||||| || || ||||||||| || | || Sbjct: 647 tcacctccacctcctcgtgagcgaagctacagcagatcaccagcacagccagccaaccgc 706 Query: 871 gaggagtccccttatgctaataacgcgt 898 ||||||||||| || || |||||||||| Sbjct: 707 gaggagtccccctacgcaaataacgcgt 734
>ref|NM_001053935.1| Oryza sativa (japonica cultivar-group) Os02g0610600 (Os02g0610600) mRNA, complete cds Length = 1039 Score = 315 bits (159), Expect = 2e-82 Identities = 314/366 (85%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 77 tcatggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgagg 136 ||||||||||||| ||||||||||| ||||||||||||| || ||||| |||||||||| Sbjct: 121 tcatggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgagg 180 Query: 137 acgagttccgcgtgtttggggttctcaagagtgtgtgggttgctagaaagccaccaggat 196 ||||||||||||||||||||||||| | |||||| |||||||||||||| |||||||| | Sbjct: 181 acgagttccgcgtgtttggggttctgaggagtgtatgggttgctagaaaaccaccaggtt 240 Query: 197 ttgctttcatcgacttcgatgagaccagggacgcaaaggatgcaattcgtgaattggatg 256 |||| || || ||||| ||||| |||||| ||| | |||||||||||||| || |||| Sbjct: 241 ttgcctttattgactttgatgaccgcagggatgcagaagatgcaattcgtgatttagatg 300 Query: 257 gtaagaatgggtggagagttgagctgtcaaccaaatctggcagtggccgtggccgagaac 316 | |||||||| ||||| |||||||||||||||||| |||| ||||| ||||||||||| | Sbjct: 301 gcaagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatc 360 Query: 317 gtgaacgctctggaggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttg 376 || || || |||||||| |||||||||||||| ||||| ||| |||||| |||| Sbjct: 361 gt------tccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttg 414 Query: 377 cacgagaatgtcgcctacggattggttctgggggcctgggtagcggaagacgccgcagcc 436 |||| ||||| ||| |||||||||||||||| ||||| || || |||||||||||||||| Sbjct: 415 cacgtgaatgccgcttacggattggttctggaggccttggcagtggaagacgccgcagcc 474 Query: 437 gaagcc 442 | |||| Sbjct: 475 gcagcc 480 Score = 71.9 bits (36), Expect = 5e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 466 agccgtagcccaagataccgcaggagcccaagctatggtagaag 509 ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 516 agccgcagcccaagataccggaggagcccaagctatggtagaag 559 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Plus Query: 450 ccgcagccgcagccgtagccgtagcccaagataccgc 486 ||||||||||||||||||||| || ||||| |||||| Sbjct: 467 ccgcagccgcagccgtagccggagtccaaggtaccgc 503 Score = 48.1 bits (24), Expect = 0.072 Identities = 72/88 (81%) Strand = Plus / Plus Query: 811 tcaccaccacctgctcgtgaacagagctatagcaggtcccctgcacagccaccccagcgt 870 ||||| |||||| ||||||| | ||||| ||||| || || ||||||||| || | || Sbjct: 636 tcacctccacctcctcgtgagcgaagctacagcagatcaccagcacagccagccaaccgc 695 Query: 871 gaggagtccccttatgctaataacgcgt 898 ||||||||||| || || |||||||||| Sbjct: 696 gaggagtccccctacgcaaataacgcgt 723
>dbj|AK104726.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B09, full insert sequence Length = 1036 Score = 315 bits (159), Expect = 2e-82 Identities = 314/366 (85%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 77 tcatggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgagg 136 ||||||||||||| ||||||||||| ||||||||||||| || ||||| |||||||||| Sbjct: 123 tcatggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgagg 182 Query: 137 acgagttccgcgtgtttggggttctcaagagtgtgtgggttgctagaaagccaccaggat 196 ||||||||||||||||||||||||| | |||||| |||||||||||||| |||||||| | Sbjct: 183 acgagttccgcgtgtttggggttctgaggagtgtatgggttgctagaaaaccaccaggtt 242 Query: 197 ttgctttcatcgacttcgatgagaccagggacgcaaaggatgcaattcgtgaattggatg 256 |||| || || ||||| ||||| |||||| ||| | |||||||||||||| || |||| Sbjct: 243 ttgcctttattgactttgatgaccgcagggatgcagaagatgcaattcgtgatttagatg 302 Query: 257 gtaagaatgggtggagagttgagctgtcaaccaaatctggcagtggccgtggccgagaac 316 | |||||||| ||||| |||||||||||||||||| |||| ||||| ||||||||||| | Sbjct: 303 gcaagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatc 362 Query: 317 gtgaacgctctggaggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttg 376 || || || |||||||| |||||||||||||| ||||| ||| |||||| |||| Sbjct: 363 gt------tccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttg 416 Query: 377 cacgagaatgtcgcctacggattggttctgggggcctgggtagcggaagacgccgcagcc 436 |||| ||||| ||| |||||||||||||||| ||||| || || |||||||||||||||| Sbjct: 417 cacgtgaatgccgcttacggattggttctggaggccttggcagtggaagacgccgcagcc 476 Query: 437 gaagcc 442 | |||| Sbjct: 477 gcagcc 482 Score = 71.9 bits (36), Expect = 5e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 466 agccgtagcccaagataccgcaggagcccaagctatggtagaag 509 ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 518 agccgcagcccaagataccggaggagcccaagctatggtagaag 561 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Plus Query: 450 ccgcagccgcagccgtagccgtagcccaagataccgc 486 ||||||||||||||||||||| || ||||| |||||| Sbjct: 469 ccgcagccgcagccgtagccggagtccaaggtaccgc 505 Score = 48.1 bits (24), Expect = 0.072 Identities = 72/88 (81%) Strand = Plus / Plus Query: 811 tcaccaccacctgctcgtgaacagagctatagcaggtcccctgcacagccaccccagcgt 870 ||||| |||||| ||||||| | ||||| ||||| || || ||||||||| || | || Sbjct: 638 tcacctccacctcctcgtgagcgaagctacagcagatcaccagcacagccagccaaccgc 697 Query: 871 gaggagtccccttatgctaataacgcgt 898 ||||||||||| || || |||||||||| Sbjct: 698 gaggagtccccctacgcaaataacgcgt 725
>dbj|AK099572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035H21, full insert sequence Length = 1040 Score = 315 bits (159), Expect = 2e-82 Identities = 314/366 (85%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 77 tcatggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgagg 136 ||||||||||||| ||||||||||| ||||||||||||| || ||||| |||||||||| Sbjct: 122 tcatggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgagg 181 Query: 137 acgagttccgcgtgtttggggttctcaagagtgtgtgggttgctagaaagccaccaggat 196 ||||||||||||||||||||||||| | |||||| |||||||||||||| |||||||| | Sbjct: 182 acgagttccgcgtgtttggggttctgaggagtgtatgggttgctagaaaaccaccaggtt 241 Query: 197 ttgctttcatcgacttcgatgagaccagggacgcaaaggatgcaattcgtgaattggatg 256 |||| || || ||||| ||||| |||||| ||| | |||||||||||||| || |||| Sbjct: 242 ttgcctttattgactttgatgaccgcagggatgcagaagatgcaattcgtgatttagatg 301 Query: 257 gtaagaatgggtggagagttgagctgtcaaccaaatctggcagtggccgtggccgagaac 316 | |||||||| ||||| |||||||||||||||||| |||| ||||| ||||||||||| | Sbjct: 302 gcaagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatc 361 Query: 317 gtgaacgctctggaggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttg 376 || || || |||||||| |||||||||||||| ||||| ||| |||||| |||| Sbjct: 362 gt------tccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttg 415 Query: 377 cacgagaatgtcgcctacggattggttctgggggcctgggtagcggaagacgccgcagcc 436 |||| ||||| ||| |||||||||||||||| ||||| || || |||||||||||||||| Sbjct: 416 cacgtgaatgccgcttacggattggttctggaggccttggcagtggaagacgccgcagcc 475 Query: 437 gaagcc 442 | |||| Sbjct: 476 gcagcc 481 Score = 71.9 bits (36), Expect = 5e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 466 agccgtagcccaagataccgcaggagcccaagctatggtagaag 509 ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 517 agccgcagcccaagataccggaggagcccaagctatggtagaag 560 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Plus Query: 450 ccgcagccgcagccgtagccgtagcccaagataccgc 486 ||||||||||||||||||||| || ||||| |||||| Sbjct: 468 ccgcagccgcagccgtagccggagtccaaggtaccgc 504 Score = 48.1 bits (24), Expect = 0.072 Identities = 72/88 (81%) Strand = Plus / Plus Query: 811 tcaccaccacctgctcgtgaacagagctatagcaggtcccctgcacagccaccccagcgt 870 ||||| |||||| ||||||| | ||||| ||||| || || ||||||||| || | || Sbjct: 637 tcacctccacctcctcgtgagcgaagctacagcagatcaccagcacagccagccaaccgc 696 Query: 871 gaggagtccccttatgctaataacgcgt 898 ||||||||||| || || |||||||||| Sbjct: 697 gaggagtccccctacgcaaataacgcgt 724
>dbj|AK060088.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G11, full insert sequence Length = 1036 Score = 315 bits (159), Expect = 2e-82 Identities = 314/366 (85%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 77 tcatggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgagg 136 ||||||||||||| ||||||||||| ||||||||||||| || ||||| |||||||||| Sbjct: 123 tcatggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgagg 182 Query: 137 acgagttccgcgtgtttggggttctcaagagtgtgtgggttgctagaaagccaccaggat 196 ||||||||||||||||||||||||| | |||||| |||||||||||||| |||||||| | Sbjct: 183 acgagttccgcgtgtttggggttctgaggagtgtatgggttgctagaaaaccaccaggtt 242 Query: 197 ttgctttcatcgacttcgatgagaccagggacgcaaaggatgcaattcgtgaattggatg 256 |||| || || ||||| ||||| |||||| ||| | |||||||||||||| || |||| Sbjct: 243 ttgcctttattgactttgatgaccgcagggatgcagaagatgcaattcgtgatttagatg 302 Query: 257 gtaagaatgggtggagagttgagctgtcaaccaaatctggcagtggccgtggccgagaac 316 | |||||||| ||||| |||||||||||||||||| |||| ||||| ||||||||||| | Sbjct: 303 gcaagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatc 362 Query: 317 gtgaacgctctggaggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttg 376 || || || |||||||| |||||||||||||| ||||| ||| |||||| |||| Sbjct: 363 gt------tccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttg 416 Query: 377 cacgagaatgtcgcctacggattggttctgggggcctgggtagcggaagacgccgcagcc 436 |||| ||||| ||| |||||||||||||||| ||||| || || |||||||||||||||| Sbjct: 417 cacgtgaatgccgcttacggattggttctggaggccttggcagtggaagacgccgcagcc 476 Query: 437 gaagcc 442 | |||| Sbjct: 477 gcagcc 482 Score = 71.9 bits (36), Expect = 5e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 466 agccgtagcccaagataccgcaggagcccaagctatggtagaag 509 ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 518 agccgcagcccaagataccggaggagcccaagctatggtagaag 561 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Plus Query: 450 ccgcagccgcagccgtagccgtagcccaagataccgc 486 ||||||||||||||||||||| || ||||| |||||| Sbjct: 469 ccgcagccgcagccgtagccggagtccaaggtaccgc 505 Score = 48.1 bits (24), Expect = 0.072 Identities = 72/88 (81%) Strand = Plus / Plus Query: 811 tcaccaccacctgctcgtgaacagagctatagcaggtcccctgcacagccaccccagcgt 870 ||||| |||||| ||||||| | ||||| ||||| || || ||||||||| || | || Sbjct: 638 tcacctccacctcctcgtgagcgaagctacagcagatcaccagcacagccagccaaccgc 697 Query: 871 gaggagtccccttatgctaataacgcgt 898 ||||||||||| || || |||||||||| Sbjct: 698 gaggagtccccctacgcaaataacgcgt 725
>emb|CT831822.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA003M11, full insert sequence Length = 882 Score = 145 bits (73), Expect = 4e-31 Identities = 156/184 (84%), Gaps = 6/184 (3%) Strand = Plus / Plus Query: 259 aagaatgggtggagagttgagctgtcaaccaaatctggcagtggccgtggccgagaacgt 318 |||||||| ||||| |||||||||||||||||| |||| ||||| ||||||||||| ||| Sbjct: 212 aagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatcgt 271 Query: 319 gaacgctctggaggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgca 378 || || |||||||| |||||||||||||| ||||| ||| |||||| |||||| Sbjct: 272 ------tccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttgca 325 Query: 379 cgagaatgtcgcctacggattggttctgggggcctgggtagcggaagacgccgcagccga 438 || ||||| ||| |||||||||||||||| ||||| || || ||||||||||||||||| Sbjct: 326 cgtgaatgccgcttacggattggttctggaggccttggcagtggaagacgccgcagccgc 385 Query: 439 agcc 442 |||| Sbjct: 386 agcc 389 Score = 121 bits (61), Expect = 6e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 77 tcatggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgagg 136 ||||||||||||| ||||||||||| ||||||||||||| || ||||| |||||||||| Sbjct: 119 tcatggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgagg 178 Query: 137 acgagttccgcgtgtttggggttct 161 ||||||||||||||||||||||||| Sbjct: 179 acgagttccgcgtgtttggggttct 203 Score = 71.9 bits (36), Expect = 5e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 466 agccgtagcccaagataccgcaggagcccaagctatggtagaag 509 ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 425 agccgcagcccaagataccggaggagcccaagctatggtagaag 468 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Plus Query: 450 ccgcagccgcagccgtagccgtagcccaagataccgc 486 ||||||||||||||||||||| || ||||| |||||| Sbjct: 376 ccgcagccgcagccgtagccggagtccaaggtaccgc 412 Score = 48.1 bits (24), Expect = 0.072 Identities = 72/88 (81%) Strand = Plus / Plus Query: 811 tcaccaccacctgctcgtgaacagagctatagcaggtcccctgcacagccaccccagcgt 870 ||||| |||||| ||||||| | ||||| ||||| || || ||||||||| || | || Sbjct: 545 tcacctccacctcctcgtgagcgaagctacagcagatcaccagcacagccagccaaccgc 604 Query: 871 gaggagtccccttatgctaataacgcgt 898 ||||||||||| || || |||||||||| Sbjct: 605 gaggagtccccctacgcaaataacgcgt 632
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 145 bits (73), Expect = 4e-31 Identities = 156/184 (84%), Gaps = 6/184 (3%) Strand = Plus / Minus Query: 259 aagaatgggtggagagttgagctgtcaaccaaatctggcagtggccgtggccgagaacgt 318 |||||||| ||||| |||||||||||||||||| |||| ||||| ||||||||||| ||| Sbjct: 24013285 aagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatcgt 24013226 Query: 319 gaacgctctggaggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgca 378 || || |||||||| |||||||||||||| ||||| ||| |||||| |||||| Sbjct: 24013225 ------tccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttgca 24013172 Query: 379 cgagaatgtcgcctacggattggttctgggggcctgggtagcggaagacgccgcagccga 438 || ||||| ||| |||||||||||||||| ||||| || || ||||||||||||||||| Sbjct: 24013171 cgtgaatgccgcttacggattggttctggaggccttggcagtggaagacgccgcagccgc 24013112 Query: 439 agcc 442 |||| Sbjct: 24013111 agcc 24013108 Score = 121 bits (61), Expect = 6e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 77 tcatggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgagg 136 ||||||||||||| ||||||||||| ||||||||||||| || ||||| |||||||||| Sbjct: 24015421 tcatggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgagg 24015362 Query: 137 acgagttccgcgtgtttggggttct 161 ||||||||||||||||||||||||| Sbjct: 24015361 acgagttccgcgtgtttggggttct 24015337 Score = 77.8 bits (39), Expect = 8e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 334 tctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcgccta 393 ||||| ||||||||||||||||||||||||| ||| |||||||| || |||||||| | Sbjct: 33561999 tctgagatgaagtgctatgagtgtggtgaaactgggcactttgctcgtgaatgtcgtttg 33561940 Query: 394 cggattggttctgggggcctgggtagcggaa 424 || |||||| |||| || |||||||| |||| Sbjct: 33561939 cgtattggtcctggaggtctgggtagtggaa 33561909 Score = 73.8 bits (37), Expect = 1e-09 Identities = 43/45 (95%) Strand = Plus / Minus Query: 466 agccgtagcccaagataccgcaggagcccaagctatggtagaagg 510 ||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 24013072 agccgcagcccaagataccggaggagcccaagctatggtagaagg 24013028 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgctttcatcgacttcgatgagaccagg 225 ||||| |||||||||||||| |||||||| ||||| || || ||||| ||||| |||| Sbjct: 24014266 agtgtatgggttgctagaaaaccaccaggttttgcctttattgactttgatgaccgcagg 24014207 Query: 226 gacgcaaaggatgcaattcgtgaattggatggtaa 260 || ||| | |||||||||||||| || |||||||| Sbjct: 24014206 gatgcagaagatgcaattcgtgatttagatggtaa 24014172 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Minus Query: 450 ccgcagccgcagccgtagccgtagcccaagataccgc 486 ||||||||||||||||||||| || ||||| |||||| Sbjct: 24013121 ccgcagccgcagccgtagccggagtccaaggtaccgc 24013085 Score = 48.1 bits (24), Expect = 0.072 Identities = 72/88 (81%) Strand = Plus / Minus Query: 811 tcaccaccacctgctcgtgaacagagctatagcaggtcccctgcacagccaccccagcgt 870 ||||| |||||| ||||||| | ||||| ||||| || || ||||||||| || | || Sbjct: 24012300 tcacctccacctcctcgtgagcgaagctacagcagatcaccagcacagccagccaaccgc 24012241 Query: 871 gaggagtccccttatgctaataacgcgt 898 ||||||||||| || || |||||||||| Sbjct: 24012240 gaggagtccccctacgcaaataacgcgt 24012213 Score = 46.1 bits (23), Expect = 0.28 Identities = 50/59 (84%) Strand = Plus / Minus Query: 508 aggagctacagcccacgggatcggtctcccaggaagcgaagttacagcagatcaccacc 566 ||||| ||||||||||||||||| ||||| | || ||| || |||||||| || ||||| Sbjct: 24012387 aggagttacagcccacgggatcgttctccaaagaggcgcagctacagcaggtcgccacc 24012329 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 450 ccgcagccgcagccgtagccgtagcc 475 ||||||||| |||||||||||||||| Sbjct: 30604645 ccgcagccgtagccgtagccgtagcc 30604620 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 455 gccgcagccgtagccgtagcc 475 ||||||||||||||||||||| Sbjct: 30604646 gccgcagccgtagccgtagcc 30604626
>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1476_F05 Length = 125426 Score = 145 bits (73), Expect = 4e-31 Identities = 156/184 (84%), Gaps = 6/184 (3%) Strand = Plus / Minus Query: 259 aagaatgggtggagagttgagctgtcaaccaaatctggcagtggccgtggccgagaacgt 318 |||||||| ||||| |||||||||||||||||| |||| ||||| ||||||||||| ||| Sbjct: 48323 aagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatcgt 48264 Query: 319 gaacgctctggaggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgca 378 || || |||||||| |||||||||||||| ||||| ||| |||||| |||||| Sbjct: 48263 ------tccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttgca 48210 Query: 379 cgagaatgtcgcctacggattggttctgggggcctgggtagcggaagacgccgcagccga 438 || ||||| ||| |||||||||||||||| ||||| || || ||||||||||||||||| Sbjct: 48209 cgtgaatgccgcttacggattggttctggaggccttggcagtggaagacgccgcagccgc 48150 Query: 439 agcc 442 |||| Sbjct: 48149 agcc 48146 Score = 121 bits (61), Expect = 6e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 77 tcatggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgagg 136 ||||||||||||| ||||||||||| ||||||||||||| || ||||| |||||||||| Sbjct: 50459 tcatggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgagg 50400 Query: 137 acgagttccgcgtgtttggggttct 161 ||||||||||||||||||||||||| Sbjct: 50399 acgagttccgcgtgtttggggttct 50375 Score = 73.8 bits (37), Expect = 1e-09 Identities = 43/45 (95%) Strand = Plus / Minus Query: 466 agccgtagcccaagataccgcaggagcccaagctatggtagaagg 510 ||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 48110 agccgcagcccaagataccggaggagcccaagctatggtagaagg 48066 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgctttcatcgacttcgatgagaccagg 225 ||||| |||||||||||||| |||||||| ||||| || || ||||| ||||| |||| Sbjct: 49304 agtgtatgggttgctagaaaaccaccaggttttgcctttattgactttgatgaccgcagg 49245 Query: 226 gacgcaaaggatgcaattcgtgaattggatggtaa 260 || ||| | |||||||||||||| || |||||||| Sbjct: 49244 gatgcagaagatgcaattcgtgatttagatggtaa 49210 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Minus Query: 450 ccgcagccgcagccgtagccgtagcccaagataccgc 486 ||||||||||||||||||||| || ||||| |||||| Sbjct: 48159 ccgcagccgcagccgtagccggagtccaaggtaccgc 48123 Score = 48.1 bits (24), Expect = 0.072 Identities = 72/88 (81%) Strand = Plus / Minus Query: 811 tcaccaccacctgctcgtgaacagagctatagcaggtcccctgcacagccaccccagcgt 870 ||||| |||||| ||||||| | ||||| ||||| || || ||||||||| || | || Sbjct: 47338 tcacctccacctcctcgtgagcgaagctacagcagatcaccagcacagccagccaaccgc 47279 Query: 871 gaggagtccccttatgctaataacgcgt 898 ||||||||||| || || |||||||||| Sbjct: 47278 gaggagtccccctacgcaaataacgcgt 47251 Score = 46.1 bits (23), Expect = 0.28 Identities = 50/59 (84%) Strand = Plus / Minus Query: 508 aggagctacagcccacgggatcggtctcccaggaagcgaagttacagcagatcaccacc 566 ||||| ||||||||||||||||| ||||| | || ||| || |||||||| || ||||| Sbjct: 47425 aggagttacagcccacgggatcgttctccaaagaggcgcagctacagcaggtcgccacc 47367
>ref|NM_001063553.1| Oryza sativa (japonica cultivar-group) Os06g0187900 (Os06g0187900) mRNA, complete cds Length = 1424 Score = 131 bits (66), Expect = 6e-27 Identities = 171/206 (83%) Strand = Plus / Plus Query: 79 atggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgaggac 138 ||||| ||||| ||||| || || |||||||| |||| || ||||| ||| |||||||| Sbjct: 129 atggcccgcgtgtacgtcggaaacctggatccccgcgtgacggcgcgggagctcgaggac 188 Query: 139 gagttccgcgtgtttggggttctcaagagtgtgtgggttgctagaaagccaccaggattt 198 ||||||||||| ||||| ||||| |||||| ||||| || |||||||||||||| ||| Sbjct: 189 gagttccgcgtctttggagttcttcggagtgtatgggtcgcaagaaagccaccaggtttt 248 Query: 199 gctttcatcgacttcgatgagaccagggacgcaaaggatgcaattcgtgaattggatggt 258 || ||||| || || ||||| | ||||| || |||||||||||||||| | ||||| Sbjct: 249 gcattcattgattttgatgacaggagggatgctcaggatgcaattcgtgatatagatggc 308 Query: 259 aagaatgggtggagagttgagctgtc 284 |||||||| ||||||||||||||||| Sbjct: 309 aagaatggatggagagttgagctgtc 334 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 454 agccgcagccgtagccgtagcccaagataccgcaggagcccaagctatggtagaaggagc 513 ||||||||||| ||||| || || || ||||||||||| ||||||||||| ||||| || Sbjct: 486 agccgcagccgcagccgaagtcccaggtaccgcaggagtccaagctatggcagaagaagt 545 Query: 514 tacagccc 521 |||||||| Sbjct: 546 tacagccc 553
>dbj|AK071765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112N11, full insert sequence Length = 1425 Score = 131 bits (66), Expect = 6e-27 Identities = 171/206 (83%) Strand = Plus / Plus Query: 79 atggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgaggac 138 ||||| ||||| ||||| || || |||||||| |||| || ||||| ||| |||||||| Sbjct: 130 atggcccgcgtgtacgtcggaaacctggatccccgcgtgacggcgcgggagctcgaggac 189 Query: 139 gagttccgcgtgtttggggttctcaagagtgtgtgggttgctagaaagccaccaggattt 198 ||||||||||| ||||| ||||| |||||| ||||| || |||||||||||||| ||| Sbjct: 190 gagttccgcgtctttggagttcttcggagtgtatgggtcgcaagaaagccaccaggtttt 249 Query: 199 gctttcatcgacttcgatgagaccagggacgcaaaggatgcaattcgtgaattggatggt 258 || ||||| || || ||||| | ||||| || |||||||||||||||| | ||||| Sbjct: 250 gcattcattgattttgatgacaggagggatgctcaggatgcaattcgtgatatagatggc 309 Query: 259 aagaatgggtggagagttgagctgtc 284 |||||||| ||||||||||||||||| Sbjct: 310 aagaatggatggagagttgagctgtc 335 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 454 agccgcagccgtagccgtagcccaagataccgcaggagcccaagctatggtagaaggagc 513 ||||||||||| ||||| || || || ||||||||||| ||||||||||| ||||| || Sbjct: 487 agccgcagccgcagccgaagtcccaggtaccgcaggagtccaagctatggcagaagaagt 546 Query: 514 tacagccc 521 |||||||| Sbjct: 547 tacagccc 554
>dbj|AK063879.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-F06, full insert sequence Length = 894 Score = 131 bits (66), Expect = 6e-27 Identities = 171/206 (83%) Strand = Plus / Plus Query: 79 atggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgaggac 138 ||||| ||||| ||||| || || |||||||| |||| || ||||| ||| |||||||| Sbjct: 143 atggcccgcgtgtacgtcggaaacctggatccccgcgtgacggcgcgggagctcgaggac 202 Query: 139 gagttccgcgtgtttggggttctcaagagtgtgtgggttgctagaaagccaccaggattt 198 ||||||||||| ||||| ||||| |||||| ||||| || |||||||||||||| ||| Sbjct: 203 gagttccgcgtctttggagttcttcggagtgtatgggtcgcaagaaagccaccaggtttt 262 Query: 199 gctttcatcgacttcgatgagaccagggacgcaaaggatgcaattcgtgaattggatggt 258 || ||||| || || ||||| | ||||| || |||||||||||||||| | ||||| Sbjct: 263 gcattcattgattttgatgacaggagggatgctcaggatgcaattcgtgatatagatggc 322 Query: 259 aagaatgggtggagagttgagctgtc 284 |||||||| ||||||||||||||||| Sbjct: 323 aagaatggatggagagttgagctgtc 348 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 454 agccgcagccgtagccgtagcccaagataccgcaggagcccaagctatggtagaaggagc 513 ||||||||||| ||||| || || || ||||||||||| ||||||||||| ||||| || Sbjct: 500 agccgcagccgcagccgaagtcccaggtaccgcaggagtccaagctatggcagaagaagt 559 Query: 514 tacagccc 521 |||||||| Sbjct: 560 tacagccc 567
>gb|AY108448.1| Zea mays PCO118433 mRNA sequence Length = 927 Score = 111 bits (56), Expect = 6e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 466 agccgtagcccaagataccgcaggagcccaagctatggtagaaggagctacagcccacgg 525 ||||| ||||||||| | || ||||||||||||||||| |||||||||||||||||||| Sbjct: 107 agccggagcccaagacatcgaaggagcccaagctatggcagaaggagctacagcccacga 166 Query: 526 gatcggtctcccaggaagcgaagttacagcag 557 ||||| ||||| |||| ||||||||||||||| Sbjct: 167 gatcgttctcctaggaggcgaagttacagcag 198
>emb|CT987457.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 695 Score = 109 bits (55), Expect = 2e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 450 ccgcagccgcagccgtagccgtagcccaagataccgcaggagcccaagctatggtagaag 509 ||||||||||||||| || || || |||||||||||||||||||||||||||||| |||| Sbjct: 189 ccgcagccgcagccgcagtcgcagtccaagataccgcaggagcccaagctatggtcgaag 248 Query: 510 gagctacagcccacg 524 ||||||||||||||| Sbjct: 249 gagctacagcccacg 263 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 325 tctggaggttctgatatgaagtgctatgagtgtggtga 362 ||||| ||||||||| ||||||||||||| |||||||| Sbjct: 82 tctggtggttctgatttgaagtgctatgaatgtggtga 119 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 253 gatggtaagaatgggtggagagttgagct 281 |||||||| ||||| |||||||||||||| Sbjct: 10 gatggtaaaaatggctggagagttgagct 38
>emb|CT984104.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 695 Score = 109 bits (55), Expect = 2e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 450 ccgcagccgcagccgtagccgtagcccaagataccgcaggagcccaagctatggtagaag 509 ||||||||||||||| || || || |||||||||||||||||||||||||||||| |||| Sbjct: 189 ccgcagccgcagccgcagtcgcagtccaagataccgcaggagcccaagctatggtcgaag 248 Query: 510 gagctacagcccacg 524 ||||||||||||||| Sbjct: 249 gagctacagcccacg 263 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 325 tctggaggttctgatatgaagtgctatgagtgtggtga 362 ||||| ||||||||| ||||||||||||| |||||||| Sbjct: 82 tctggtggttctgatttgaagtgctatgaatgtggtga 119 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 253 gatggtaagaatgggtggagagttgagct 281 |||||||| ||||| |||||||||||||| Sbjct: 10 gatggtaaaaatggctggagagttgagct 38
>gb|DQ019627.1| Triticum aestivum pre-mRNA processing factor mRNA, complete cds Length = 780 Score = 83.8 bits (42), Expect = 1e-12 Identities = 126/154 (81%) Strand = Plus / Plus Query: 131 tcgaggacgagttccgcgtgtttggggttctcaagagtgtgtgggttgctagaaagccac 190 |||||||||||||||||||||| ||||||||| |||||| |||||||| || ||||||| Sbjct: 153 tcgaggacgagttccgcgtgttcggggttctccggagtgtatgggttgcaaggaagccac 212 Query: 191 caggatttgctttcatcgacttcgatgagaccagggacgcaaaggatgcaattcgtgaat 250 | || ||||| || | || || ||||| | ||||| || ||||||||||| || | Sbjct: 213 ctggttttgcatttgttgattttgatgacaggagggatgctcaggatgcaattaaagatt 272 Query: 251 tggatggtaagaatgggtggagagttgagctgtc 284 | ||||| |||||||| |||||||||||| |||| Sbjct: 273 tagatggcaagaatggttggagagttgagttgtc 306 Score = 79.8 bits (40), Expect = 2e-11 Identities = 100/120 (83%) Strand = Plus / Plus Query: 316 cgtgaacgctctggaggttctgatatgaagtgctatgagtgtggtgaaagtggtcacttt 375 ||||| || ||||| || ||||| |||||||| |||||||||||||| |||||||||| Sbjct: 335 cgtgatcgatctggtggatctgagatgaagtgttatgagtgtggtgagtctggtcacttt 394 Query: 376 gcacgagaatgtcgcctacggattggttctgggggcctgggtagcggaagacgccgcagc 435 || || ||||| || || ||||||||||||||||||| || || ||||| || |||||| Sbjct: 395 gcccgtgaatgccgtctgaggattggttctgggggcctaggcagtggaaggcgtcgcagc 454 Score = 61.9 bits (31), Expect = 5e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 454 agccgcagccgtagccgtagcccaagataccgcaggagcccaagctatggtagaaggagc 513 ||||| ||||| || || ||||| |||||||||||||| ||||||||| | ||||| ||| Sbjct: 464 agccgtagccgcagtcggagccctagataccgcaggagtccaagctatagcagaagaagc 523 Query: 514 tacagcc 520 ||||||| Sbjct: 524 tacagcc 530
>gb|DQ019626.1| Triticum aestivum pre-mRNA processing factor (RSZ22) mRNA, complete cds Length = 940 Score = 81.8 bits (41), Expect = 5e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 331 ggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcgc 390 |||||||||||||| |||||||| ||||||||| ||| |||||||| || |||||||| Sbjct: 405 ggttctgatatgaaatgctatgaatgtggtgaatctgggcactttgctcgtgaatgtcgt 464 Query: 391 ctacggattggttctgggggcctgggtagcggaagacgccgcagc 435 || || |||||| ||||||| ||||| || ||||| || |||||| Sbjct: 465 ctgcgtattggtgctgggggtctgggcagtggaaggcgtcgcagc 509 Score = 61.9 bits (31), Expect = 5e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 454 agccgcagccgtagccgtagcccaagataccgcaggagcccaagctatggtagaaggagc 513 ||||||||||| ||||| || || || ||||||||||| || |||||||| ||||| || Sbjct: 513 agccgcagccgcagccgcagtcctaggtaccgcaggagtccgagctatggcagaagaagt 572 Query: 514 tacagcccacgggatcggtctcc 536 |||||||| || ||||| ||||| Sbjct: 573 tacagccctcgtgatcgctctcc 595 Score = 48.1 bits (24), Expect = 0.072 Identities = 45/52 (86%) Strand = Plus / Plus Query: 233 aggatgcaattcgtgaattggatggtaagaatgggtggagagttgagctgtc 284 |||||||| ||||||| | ||||| |||||||| ||||| ||||||||||| Sbjct: 280 aggatgcacttcgtgatctagatggcaagaatggatggagggttgagctgtc 331
>ref|NM_001054887.1| Oryza sativa (japonica cultivar-group) Os02g0789400 (Os02g0789400) mRNA, complete cds Length = 1393 Score = 77.8 bits (39), Expect = 8e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 334 tctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcgccta 393 ||||| ||||||||||||||||||||||||| ||| |||||||| || |||||||| | Sbjct: 413 tctgagatgaagtgctatgagtgtggtgaaactgggcactttgctcgtgaatgtcgtttg 472 Query: 394 cggattggttctgggggcctgggtagcggaa 424 || |||||| |||| || |||||||| |||| Sbjct: 473 cgtattggtcctggaggtctgggtagtggaa 503 Score = 50.1 bits (25), Expect = 0.018 Identities = 43/49 (87%) Strand = Plus / Plus Query: 233 aggatgcaattcgtgaattggatggtaagaatgggtggagagttgagct 281 |||||||| | ||||| || ||||| |||||||| |||||||||||||| Sbjct: 318 aggatgcactccgtgatttagatggcaagaatggatggagagttgagct 366 Score = 50.1 bits (25), Expect = 0.018 Identities = 49/57 (85%) Strand = Plus / Plus Query: 480 ataccgcaggagcccaagctatggtagaaggagctacagcccacgggatcggtctcc 536 |||||||| |||||| | |||||||||||| |||||||| || || ||||| ||||| Sbjct: 544 ataccgcaagagcccgacctatggtagaagaagctacagtcctcgtgatcgctctcc 600
>ref|NM_128020.3| Arabidopsis thaliana nucleic acid binding (AT2G24590) mRNA, complete cds Length = 976 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 331 ggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcg 389 ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 361 ggttctgatttgaagtgctatgagtgtggtgagtctggtcactttgcacgtgaatgtcg 419
>gb|AC006954.8| Arabidopsis thaliana chromosome 2 clone F25P17 map mi238, complete sequence Length = 93701 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 331 ggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcg 389 ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 55411 ggttctgatttgaagtgctatgagtgtggtgagtctggtcactttgcacgtgaatgtcg 55353
>gb|BT005216.1| Arabidopsis thaliana At2g24590 mRNA, complete cds Length = 591 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 331 ggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcg 389 ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 277 ggttctgatttgaagtgctatgagtgtggtgagtctggtcactttgcacgtgaatgtcg 335
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 77.8 bits (39), Expect = 8e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 334 tctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcgccta 393 ||||| ||||||||||||||||||||||||| ||| |||||||| || |||||||| | Sbjct: 136874 tctgagatgaagtgctatgagtgtggtgaaactgggcactttgctcgtgaatgtcgtttg 136815 Query: 394 cggattggttctgggggcctgggtagcggaa 424 || |||||| |||| || |||||||| |||| Sbjct: 136814 cgtattggtcctggaggtctgggtagtggaa 136784
>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1046_F07 Length = 114184 Score = 77.8 bits (39), Expect = 8e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 334 tctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcgccta 393 ||||| ||||||||||||||||||||||||| ||| |||||||| || |||||||| | Sbjct: 32670 tctgagatgaagtgctatgagtgtggtgaaactgggcactttgctcgtgaatgtcgtttg 32611 Query: 394 cggattggttctgggggcctgggtagcggaa 424 || |||||| |||| || |||||||| |||| Sbjct: 32610 cgtattggtcctggaggtctgggtagtggaa 32580
>dbj|AK117883.1| Arabidopsis thaliana At2g24590 mRNA for putative RSZp22 splicing factor, complete cds, clone: RAFL19-06-A15 Length = 967 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 331 ggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcg 389 ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 361 ggttctgatttgaagtgctatgagtgtggtgagtctggtcactttgcacgtgaatgtcg 419
>dbj|AK073359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027A21, full insert sequence Length = 1390 Score = 77.8 bits (39), Expect = 8e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 334 tctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcgccta 393 ||||| ||||||||||||||||||||||||| ||| |||||||| || |||||||| | Sbjct: 411 tctgagatgaagtgctatgagtgtggtgaaactgggcactttgctcgtgaatgtcgtttg 470 Query: 394 cggattggttctgggggcctgggtagcggaa 424 || |||||| |||| || |||||||| |||| Sbjct: 471 cgtattggtcctggaggtctgggtagtggaa 501 Score = 50.1 bits (25), Expect = 0.018 Identities = 43/49 (87%) Strand = Plus / Plus Query: 233 aggatgcaattcgtgaattggatggtaagaatgggtggagagttgagct 281 |||||||| | ||||| || ||||| |||||||| |||||||||||||| Sbjct: 316 aggatgcactccgtgatttagatggcaagaatggatggagagttgagct 364 Score = 50.1 bits (25), Expect = 0.018 Identities = 49/57 (85%) Strand = Plus / Plus Query: 480 ataccgcaggagcccaagctatggtagaaggagctacagcccacgggatcggtctcc 536 |||||||| |||||| | |||||||||||| |||||||| || || ||||| ||||| Sbjct: 542 ataccgcaagagcccgacctatggtagaagaagctacagtcctcgtgatcgctctcc 598
>dbj|AK073210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005C22, full insert sequence Length = 909 Score = 77.8 bits (39), Expect = 8e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 334 tctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcgccta 393 ||||| ||||||||||||||||||||||||| ||| |||||||| || |||||||| | Sbjct: 409 tctgagatgaagtgctatgagtgtggtgaaactgggcactttgctcgtgaatgtcgtttg 468 Query: 394 cggattggttctgggggcctgggtagcggaa 424 || |||||| |||| || |||||||| |||| Sbjct: 469 cgtattggtcctggaggtctgggtagtggaa 499 Score = 50.1 bits (25), Expect = 0.018 Identities = 43/49 (87%) Strand = Plus / Plus Query: 233 aggatgcaattcgtgaattggatggtaagaatgggtggagagttgagct 281 |||||||| | ||||| || ||||| |||||||| |||||||||||||| Sbjct: 314 aggatgcactccgtgatttagatggcaagaatggatggagagttgagct 362 Score = 50.1 bits (25), Expect = 0.018 Identities = 49/57 (85%) Strand = Plus / Plus Query: 480 ataccgcaggagcccaagctatggtagaaggagctacagcccacgggatcggtctcc 536 |||||||| |||||| | |||||||||||| |||||||| || || ||||| ||||| Sbjct: 540 ataccgcaagagcccgacctatggtagaagaagctacagtcctcgtgatcgctctcc 596
>emb|BX821317.1|CNS0A88V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZF09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 906 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 331 ggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcg 389 ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 290 ggttctgatttgaagtgctatgagtgtggtgagtctggtcactttgcacgtgaatgtcg 348
>emb|BX821309.1|CNS0A86V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 837 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 331 ggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcg 389 ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 339 ggttctgatttgaagtgctatgagtgtggtgagtctggtcactttgcacgtgaatgtcg 397
>gb|M37778.1|ATHCOLR A.thaliana middle repetative sequence Length = 1098 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 331 ggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcg 389 ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 580 ggttctgatttgaagtgctatgagtgtggtgagtctggtcactttgcacgtgaatgtcg 522
>gb|BT018240.1| Zea mays clone EL01N0563B09.c mRNA sequence Length = 825 Score = 73.8 bits (37), Expect = 1e-09 Identities = 79/93 (84%) Strand = Plus / Plus Query: 343 aagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcgcctacggattggt 402 |||||||||||||||||||| | ||| ||||||||||| |||||||| || || ||||| Sbjct: 265 aagtgctatgagtgtggtgagactgggcactttgcacgtgaatgtcgtctgcgcattggc 324 Query: 403 tctgggggcctgggtagcggaagacgccgcagc 435 ||||| || || || || |||||||| |||||| Sbjct: 325 tctggaggtctaggcagtggaagacgtcgcagc 357 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 472 agcccaagataccgcaggagcccaagctatggtagaaggagctacagccc 521 ||||| |||||||||||||| || |||||| |||||||||||| ||||| Sbjct: 379 agccctagataccgcaggagtccgagctataatagaaggagctatagccc 428 Score = 48.1 bits (24), Expect = 0.072 Identities = 48/56 (85%) Strand = Plus / Plus Query: 223 agggacgcaaaggatgcaattcgtgaattggatggtaagaatgggtggagagttga 278 ||||| ||| ||||||| |||||||| | |||||||||||||| |||| |||||| Sbjct: 151 agggatgcagaggatgctattcgtgatctagatggtaagaatggatggaaagttga 206
>gb|AY103797.1| Zea mays PCO118328 mRNA sequence Length = 1464 Score = 73.8 bits (37), Expect = 1e-09 Identities = 79/93 (84%) Strand = Plus / Plus Query: 343 aagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcgcctacggattggt 402 |||||||||||||||||||| | ||| ||||||||||| |||||||| || || ||||| Sbjct: 432 aagtgctatgagtgtggtgagactgggcactttgcacgtgaatgtcgtctgcgcattggc 491 Query: 403 tctgggggcctgggtagcggaagacgccgcagc 435 ||||| || || || || |||||||| |||||| Sbjct: 492 tctggaggtctaggcagtggaagacgtcgcagc 524 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Plus Query: 233 aggatgcaattcgtgaattggatggtaagaatgggtggagagttga 278 ||||||| |||||||| | |||||||||||||| ||||||||||| Sbjct: 328 aggatgctattcgtgatctagatggtaagaatggatggagagttga 373 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 472 agcccaagataccgcaggagcccaagctatggtagaaggagctacagccc 521 ||||| |||||||||||||| || |||||| |||||||||||| ||||| Sbjct: 546 agccctagataccgcaggagtccgagctataatagaaggagctatagccc 595
>gb|AY104860.1| Zea mays PCO131393 mRNA sequence Length = 1093 Score = 69.9 bits (35), Expect = 2e-08 Identities = 119/147 (80%) Strand = Plus / Plus Query: 133 gaggacgagttccgcgtgtttggggttctcaagagtgtgtgggttgctagaaagccacca 192 ||||||||||||||| ||| |||||||| ||||| ||||||||| | || ||||| Sbjct: 232 gaggacgagttccgcacgttcggggttcttcgcagtgtctgggttgctcggaaaccacct 291 Query: 193 ggatttgctttcatcgacttcgatgagaccagggacgcaaaggatgcaattcgtgaattg 252 || ||||| || || || || ||||| | ||||||||| |||||||||| ||||| | Sbjct: 292 ggctttgcgtttattgattttgatgataagagggacgcagaggatgcaatccgtgaccta 351 Query: 253 gatggtaagaatgggtggagagttgag 279 ||||| |||||||| |||||||||||| Sbjct: 352 gatggcaagaatggatggagagttgag 378
>gb|BT013207.1| Lycopersicon esculentum clone 134417F, mRNA sequence Length = 899 Score = 67.9 bits (34), Expect = 8e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 325 tctggaggttctgatatgaagtgctatgagtgtggtga 362 ||||||||||||||| |||||||||||||||||||||| Sbjct: 307 tctggaggttctgatttgaagtgctatgagtgtggtga 344 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 251 tggatggtaagaatgggtggagagttgagct 281 |||||||||||||||| |||||||| ||||| Sbjct: 221 tggatggtaagaatggatggagagtggagct 251
>gb|DQ245839.1| Zea mays clone 20765 mRNA sequence Length = 1036 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 343 aagtgctatgagtgtggtgaaagtggtcactttgcacgagaatgtcg 389 |||||||||||||||||||| | ||| ||||||||||| |||||||| Sbjct: 367 aagtgctatgagtgtggtgagactgggcactttgcacgtgaatgtcg 413 Score = 52.0 bits (26), Expect = 0.005 Identities = 44/50 (88%) Strand = Plus / Plus Query: 472 agcccaagataccgcaggagcccaagctatggtagaaggagctacagccc 521 ||||| |||||||||||||| || |||||| |||||||||||| ||||| Sbjct: 481 agccctagataccgcaggagtccgagctataatagaaggagctatagccc 530 Score = 48.1 bits (24), Expect = 0.072 Identities = 48/56 (85%) Strand = Plus / Plus Query: 223 agggacgcaaaggatgcaattcgtgaattggatggtaagaatgggtggagagttga 278 ||||| ||| ||||||| |||||||| | |||||||||||||| |||| |||||| Sbjct: 253 agggatgcagaggatgctattcgtgatctagatggtaagaatggatggaaagttga 308
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 61.9 bits (31), Expect = 5e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 79 atggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgaggac 138 ||||| ||||| ||||| || || |||||||| |||| || ||||| ||| |||||||| Sbjct: 4439829 atggcccgcgtgtacgtcggaaacctggatccccgcgtgacggcgcgggagctcgaggac 4439888 Query: 139 gagttccgcgtgtttggggttct 161 ||||||||||| ||||| ||||| Sbjct: 4439889 gagttccgcgtctttggagttct 4439911 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 454 agccgcagccgtagccgtagcccaagataccgcaggagcccaagctatggtagaagg 510 ||||||||||| ||||| || || || ||||||||||| ||||||||||| |||||| Sbjct: 4441398 agccgcagccgcagccgaagtcccaggtaccgcaggagtccaagctatggcagaagg 4441454 Score = 54.0 bits (27), Expect = 0.001 Identities = 69/83 (83%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgctttcatcgacttcgatgagaccagg 225 ||||| ||||| || |||||||||||||| ||||| ||||| || || ||||| | ||| Sbjct: 4440648 agtgtatgggtcgcaagaaagccaccaggttttgcattcattgattttgatgacaggagg 4440707 Query: 226 gacgcaaaggatgcaattcgtga 248 || || |||||||||||||||| Sbjct: 4440708 gatgctcaggatgcaattcgtga 4440730 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 259 aagaatgggtggagagttgagctgtc 284 |||||||| ||||||||||||||||| Sbjct: 4441221 aagaatggatggagagttgagctgtc 4441246
>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005A05 Length = 162520 Score = 61.9 bits (31), Expect = 5e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 79 atggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgaggac 138 ||||| ||||| ||||| || || |||||||| |||| || ||||| ||| |||||||| Sbjct: 34559 atggcccgcgtgtacgtcggaaacctggatccccgcgtgacggcgcgggagctcgaggac 34618 Query: 139 gagttccgcgtgtttggggttct 161 ||||||||||| ||||| ||||| Sbjct: 34619 gagttccgcgtctttggagttct 34641 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 454 agccgcagccgtagccgtagcccaagataccgcaggagcccaagctatggtagaagg 510 ||||||||||| ||||| || || || ||||||||||| ||||||||||| |||||| Sbjct: 36128 agccgcagccgcagccgaagtcccaggtaccgcaggagtccaagctatggcagaagg 36184 Score = 54.0 bits (27), Expect = 0.001 Identities = 69/83 (83%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgctttcatcgacttcgatgagaccagg 225 ||||| ||||| || |||||||||||||| ||||| ||||| || || ||||| | ||| Sbjct: 35378 agtgtatgggtcgcaagaaagccaccaggttttgcattcattgattttgatgacaggagg 35437 Query: 226 gacgcaaaggatgcaattcgtga 248 || || |||||||||||||||| Sbjct: 35438 gatgctcaggatgcaattcgtga 35460 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 259 aagaatgggtggagagttgagctgtc 284 |||||||| ||||||||||||||||| Sbjct: 35951 aagaatggatggagagttgagctgtc 35976
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 61.9 bits (31), Expect = 5e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 79 atggctcgcgtctacgtggggaatctggatccgcgcgccactgcgcgcgagatcgaggac 138 ||||| ||||| ||||| || || |||||||| |||| || ||||| ||| |||||||| Sbjct: 87510 atggcccgcgtgtacgtcggaaacctggatccccgcgtgacggcgcgggagctcgaggac 87569 Query: 139 gagttccgcgtgtttggggttct 161 ||||||||||| ||||| ||||| Sbjct: 87570 gagttccgcgtctttggagttct 87592 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 454 agccgcagccgtagccgtagcccaagataccgcaggagcccaagctatggtagaagg 510 ||||||||||| ||||| || || || ||||||||||| ||||||||||| |||||| Sbjct: 89079 agccgcagccgcagccgaagtcccaggtaccgcaggagtccaagctatggcagaagg 89135 Score = 54.0 bits (27), Expect = 0.001 Identities = 69/83 (83%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgctttcatcgacttcgatgagaccagg 225 ||||| ||||| || |||||||||||||| ||||| ||||| || || ||||| | ||| Sbjct: 88329 agtgtatgggtcgcaagaaagccaccaggttttgcattcattgattttgatgacaggagg 88388 Query: 226 gacgcaaaggatgcaattcgtga 248 || || |||||||||||||||| Sbjct: 88389 gatgctcaggatgcaattcgtga 88411 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 259 aagaatgggtggagagttgagctgtc 284 |||||||| ||||||||||||||||| Sbjct: 88902 aagaatggatggagagttgagctgtc 88927
>gb|DQ246010.1| Zea mays clone 94573 mRNA sequence Length = 918 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 331 ggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgcacg 380 ||||||||| ||||||||||||||||||| || ||||||||||||||| Sbjct: 309 ggttctgatttgaagtgctatgagtgtggcgagcctggtcactttgcacg 358
>gb|AC159804.18| Glycine max clone gmp1-34b24, complete sequence Length = 136901 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 236 atgcaattcgtgaattggatggtaagaatgggtggagagttgagct 281 |||| ||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 120912 atgctattcgtgaattggatggcaagaatggttggagggttgagct 120957
>ref|NM_001058257.1| Oryza sativa (japonica cultivar-group) Os03g0820700 (Os03g0820700) mRNA, complete cds Length = 1606 Score = 58.0 bits (29), Expect = 7e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 450 ccgcagccgcagccgtagccgtagcccaa 478 ||||||||||||||||||||||||||||| Sbjct: 630 ccgcagccgcagccgtagccgtagcccaa 658 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 451 cgcagccgcagccgtagccgtagcc 475 |||||||||||||| |||||||||| Sbjct: 625 cgcagccgcagccgcagccgtagcc 649
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 58.0 bits (29), Expect = 7e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 450 ccgcagccgcagccgtagccgtagcccaa 478 ||||||||||||||||||||||||||||| Sbjct: 34224234 ccgcagccgcagccgtagccgtagcccaa 34224206 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 451 cgcagccgcagccgtagccgtagcc 475 |||||||||||||| |||||||||| Sbjct: 34224239 cgcagccgcagccgcagccgtagcc 34224215
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 58.0 bits (29), Expect = 7e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 450 ccgcagccgcagccgtagccgtagcccaa 478 ||||||||||||||||||||||||||||| Sbjct: 97574 ccgcagccgcagccgtagccgtagcccaa 97546 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 451 cgcagccgcagccgtagccgtagcc 475 |||||||||||||| |||||||||| Sbjct: 97579 cgcagccgcagccgcagccgtagcc 97555
>ref|XM_001123058.1| PREDICTED: Apis mellifera similar to Rbp1-like CG1987-PA (LOC727349), partial mRNA Length = 499 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 168 tgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||| ||||| ||||||||||| Sbjct: 314 tgtgtgggttgctagaaatccaccgggatttgcttt 349
>ref|XM_001173207.1| PREDICTED: Pan troglodytes similar to MGC89287 protein, transcript variant 4 (LOC747921), mRNA Length = 4344 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 923 agtgtgtgggttgctagaaacccacccggctttgcttt 960
>ref|XM_001173177.1| PREDICTED: Pan troglodytes similar to MGC89287 protein, transcript variant 1 (LOC747921), mRNA Length = 3474 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 263 agtgtgtgggttgctagaaacccacccggctttgcttt 300
>ref|XM_001173191.1| PREDICTED: Pan troglodytes similar to MGC89287 protein, transcript variant 3 (LOC747921), mRNA Length = 3685 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 417 agtgtgtgggttgctagaaacccacccggctttgcttt 454
>ref|XM_001173216.1| PREDICTED: Pan troglodytes similar to MGC89287 protein, transcript variant 5 (LOC747921), mRNA Length = 4191 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 923 agtgtgtgggttgctagaaacccacccggctttgcttt 960
>ref|XM_001173185.1| PREDICTED: Pan troglodytes similar to MGC89287 protein, transcript variant 2 (LOC747921), mRNA Length = 3830 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 562 agtgtgtgggttgctagaaacccacccggctttgcttt 599
>ref|XM_001112817.1| PREDICTED: Macaca mulatta similar to Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing factor SRP20) (X16 protein) (LOC719123), mRNA Length = 2482 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 496 agtgtgtgggttgctagaaacccacccggctttgcttt 533
>gb|BC051276.1| Homo sapiens mRNA similar to splicing factor, arginine/serine-rich 3 (cDNA clone IMAGE:6249759) Length = 2318 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 1157 agtgtgtgggttgctagaaacccacccggctttgcttt 1194
>gb|BC000914.1| Homo sapiens splicing factor, arginine/serine-rich 3, mRNA (cDNA clone MGC:5205 IMAGE:3049167), complete cds Length = 1403 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 217 agtgtgtgggttgctagaaacccacccggctttgcttt 254
>gb|BT007726.1| Synthetic construct Homo sapiens splicing factor, arginine/serine-rich 3 mRNA, partial cds Length = 495 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 112 agtgtgtgggttgctagaaacccacccggctttgcttt 149
>gb|BT007017.1| Homo sapiens splicing factor, arginine/serine-rich 3 mRNA, complete cds Length = 495 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 112 agtgtgtgggttgctagaaacccacccggctttgcttt 149
>gb|BC069018.1| Homo sapiens splicing factor, arginine/serine-rich 3, mRNA (cDNA clone MGC:78599 IMAGE:3507371), complete cds Length = 1568 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 213 agtgtgtgggttgctagaaacccacccggctttgcttt 250
>emb|Z85986.1|HS108K11 Human DNA sequence from clone RP1-108K11 on chromosome 6p21 Contains the SFRS3 for splicing factor arginine/serine-rich (SRP20), the STK38 gene for serine/threonine protein kinase (NDR), the 3' end of a gene for a novel protein (2410004NRIK) and a CpG island, complete sequence Length = 145616 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Minus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 26465 agtgtgtgggttgctagaaacccacccggctttgcttt 26428
>emb|CR624897.1| full-length cDNA clone CL0BB019ZF07 of Neuroblastoma of Homo sapiens (human) Length = 1566 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 237 agtgtgtgggttgctagaaacccacccggctttgcttt 274
>emb|CR621558.1| full-length cDNA clone CS0DM008YG16 of Fetal liver of Homo sapiens (human) Length = 1548 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 237 agtgtgtgggttgctagaaacccacccggctttgcttt 274
>emb|CR624175.1| full-length cDNA clone CS0DM002YE08 of Fetal liver of Homo sapiens (human) Length = 886 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 205 agtgtgtgggttgctagaaacccacccggctttgcttt 242
>emb|CR622471.1| full-length cDNA clone CS0DI085YL20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1512 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 217 agtgtgtgggttgctagaaacccacccggctttgcttt 254
>emb|CR622370.1| full-length cDNA clone CS0DJ010YP13 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1380 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 217 agtgtgtgggttgctagaaacccacccggctttgcttt 254
>emb|CR621528.1| full-length cDNA clone CS0DI081YL02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1538 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 237 agtgtgtgggttgctagaaacccacccggctttgcttt 274
>emb|CR599518.1| full-length cDNA clone CS0DA003YF09 of Neuroblastoma of Homo sapiens (human) Length = 1368 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 237 agtgtgtgggttgctagaaacccacccggctttgcttt 274
>emb|CR617752.1| full-length cDNA clone CL0BB003ZG07 of Neuroblastoma of Homo sapiens (human) Length = 1386 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 201 agtgtgtgggttgctagaaacccacccggctttgcttt 238
>emb|CR617139.1| full-length cDNA clone CS0DH005YL05 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1382 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 213 agtgtgtgggttgctagaaacccacccggctttgcttt 250
>emb|CR613674.1| full-length cDNA clone CS0DI041YM08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1482 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 205 agtgtgtgggttgctagaaacccacccggctttgcttt 242
>emb|CR612662.1| full-length cDNA clone CL0BB026ZE07 of Neuroblastoma of Homo sapiens (human) Length = 1389 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 217 agtgtgtgggttgctagaaacccacccggctttgcttt 254
>emb|CR612246.1| full-length cDNA clone CS0DH005YG20 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1381 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 237 agtgtgtgggttgctagaaacccacccggctttgcttt 274
>emb|CR611557.1| full-length cDNA clone CS0DI053YC06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1989 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 237 agtgtgtgggttgctagaaacccacccggctttgcttt 274
>emb|CR608185.1| full-length cDNA clone CS0CAP001YK24 of Thymus of Homo sapiens (human) Length = 1336 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 201 agtgtgtgggttgctagaaacccacccggctttgcttt 238
>emb|CR599324.1| full-length cDNA clone CS0DI006YI16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1538 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 237 agtgtgtgggttgctagaaacccacccggctttgcttt 274
>emb|CR601962.1| full-length cDNA clone CS0DG003YC16 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1358 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 237 agtgtgtgggttgctagaaacccacccggctttgcttt 274
>emb|CR595256.1| full-length cDNA clone CS0DE011YO18 of Placenta of Homo sapiens (human) Length = 1538 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 237 agtgtgtgggttgctagaaacccacccggctttgcttt 274
>gb|AY891770.1| Synthetic construct Homo sapiens clone FLH023810.01L splicing factor arginine/serine-rich 3 (SFRS3) mRNA, partial cds Length = 495 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 112 agtgtgtgggttgctagaaacccacccggctttgcttt 149
>gb|AY891769.1| Synthetic construct Homo sapiens clone FLH023809.01L splicing factor arginine/serine-rich 3 (SFRS3) mRNA, partial cds Length = 495 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 112 agtgtgtgggttgctagaaacccacccggctttgcttt 149
>gb|AY889278.1| Synthetic construct Homo sapiens clone FLH023814.01X splicing factor arginine/serine-rich 3 (SFRS3) mRNA, complete cds Length = 495 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 112 agtgtgtgggttgctagaaacccacccggctttgcttt 149
>gb|AY889277.1| Synthetic construct Homo sapiens clone FLH023813.01X splicing factor arginine/serine-rich 3 (SFRS3) mRNA, complete cds Length = 495 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 112 agtgtgtgggttgctagaaacccacccggctttgcttt 149
>ref|NM_003017.3| Homo sapiens splicing factor, arginine/serine-rich 3 (SFRS3), mRNA gb|AF107405.1|AF107405 Homo sapiens pre-mRNA splicing factor (SFRS3) mRNA, complete cds Length = 2060 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 207 agtgtgtgggttgctagaaacccacccggctttgcttt 244
>gb|L10838.1|HUMSRP20 Homo sapiens SR protein family, pre-mRNA splicing factor (SRp20) mRNA, complete cds Length = 528 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||||| || |||||||| Sbjct: 112 agtgtgtgggttgctagaaacccacccggctttgcttt 149
>ref|XM_397274.3| PREDICTED: Apis mellifera similar to Rbp1-like CG1987-PA (LOC413835), mRNA Length = 583 Score = 48.1 bits (24), Expect = 0.072 Identities = 33/36 (91%) Strand = Plus / Plus Query: 168 tgtgtgggttgctagaaagccaccaggatttgcttt 203 ||||||||| |||||||| ||||| ||||||||||| Sbjct: 208 tgtgtgggtagctagaaatccacctggatttgcttt 243
>ref|NM_119307.2| Arabidopsis thaliana SRZ-22 (SRZ-22) mRNA, complete cds Length = 982 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 475 ccaagataccgcaggagcccaagctatggtagaaggagctacagccc 521 ||||||||| | ||||||||||||||||| | ||||| |||||||| Sbjct: 498 ccaagatacagaaggagcccaagctatggacggaggagttacagccc 544
>gb|AY117206.1| Arabidopsis thaliana putative RSZp22 splicing factor (At4g31580) mRNA, complete cds Length = 634 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 475 ccaagataccgcaggagcccaagctatggtagaaggagctacagccc 521 ||||||||| | ||||||||||||||||| | ||||| |||||||| Sbjct: 397 ccaagatacagaaggagcccaagctatggacggaggagttacagccc 443
>gb|AY065387.1| Arabidopsis thaliana putative RSZp22 splicing factor (At4g31580) mRNA, complete cds Length = 983 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 475 ccaagataccgcaggagcccaagctatggtagaaggagctacagccc 521 ||||||||| | ||||||||||||||||| | ||||| |||||||| Sbjct: 473 ccaagatacagaaggagcccaagctatggacggaggagttacagccc 519
>emb|CR936368.12| M.truncatula DNA sequence from clone MTH2-4O11 on chromosome 3, complete sequence Length = 140262 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Minus Query: 331 ggttctgatatgaagtgctatgagtgtggtgaaagtggtcactttgc 377 ||||||||| |||| || ||||||||||||||| |||||| ||||| Sbjct: 29339 ggttctgatttgaaatgttatgagtgtggtgaacctggtcattttgc 29293
>gb|AY086525.1| Arabidopsis thaliana clone 25581 mRNA, complete sequence Length = 913 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 475 ccaagataccgcaggagcccaagctatggtagaaggagctacagccc 521 ||||||||| | ||||||||||||||||| | ||||| |||||||| Sbjct: 498 ccaagatacagaaggagcccaagctatggacggaggagttacagccc 544
>emb|AJ002378.1|ATRSZP22 Arabidopsis thaliana mRNA for RSZp22 splicing factor Length = 894 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 475 ccaagataccgcaggagcccaagctatggtagaaggagctacagccc 521 ||||||||| | ||||||||||||||||| | ||||| |||||||| Sbjct: 475 ccaagatacagaaggagcccaagctatggacggaggagttacagccc 521
>gb|AF033586.1|AF033586 Arabidopsis thaliana 9G8-like SR protein (SRZ22) mRNA, complete cds Length = 709 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 475 ccaagataccgcaggagcccaagctatggtagaaggagctacagccc 521 ||||||||| | ||||||||||||||||| | ||||| |||||||| Sbjct: 446 ccaagatacagaaggagcccaagctatggacggaggagttacagccc 492
>ref|XR_022443.1| PREDICTED: Pan troglodytes hypothetical protein LOC748894 (LOC748894), mRNA Length = 1433 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||| | || |||||||| Sbjct: 112 agtgtgtgggttgctagaaacccatctggctttgcttt 149
>ref|XM_001128761.1| PREDICTED: Homo sapiens similar to PDZ domain containing 7 (LOC731187), mRNA Length = 1653 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 450 ccgcagccgcagccgtagccgtagcc 475 ||||||||||||||||||||| |||| Sbjct: 867 ccgcagccgcagccgtagccgcagcc 892
>ref|XM_532124.2| PREDICTED: Canis familiaris splicing factor (SRP20), mRNA Length = 3035 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| || || || |||||||| Sbjct: 643 agtgtgtgggttgctagaaaccctcccggctttgcttt 680
>ref|NM_001034700.1| Bos taurus similar to Splicing factor, arginine/serine-rich 3 (Pre-mRNA splicing factor SRP20) (X16 protein) (MGC127913), mRNA gb|BC102735.1| Bos taurus similar to Splicing factor, arginine/serine-rich 3 (Pre-mRNA splicing factor SRP20) (X16 protein), mRNA (cDNA clone MGC:127913 IMAGE:30957672), complete cds Length = 986 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| || || || |||||||| Sbjct: 238 agtgtgtgggttgctagaaaccctcccggctttgcttt 275
>emb|AL138638.2|ATF23N14 Arabidopsis thaliana DNA chromosome 3, BAC clone F23N14 Length = 83442 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 gatatgaagtgctatgagtgtg 358 |||||||||||||||||||||| Sbjct: 60394 gatatgaagtgctatgagtgtg 60415
>emb|AJ388517.1|CFA388517 Canis familiaris mRNA for partial splicing factor SRp20 (srp20 gene) Length = 511 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| || || || |||||||| Sbjct: 223 agtgtgtgggttgctagaaaccctcccggctttgcttt 260
>gb|AC109815.5| Homo sapiens BAC clone CTD-2192H8 from 2, complete sequence Length = 165158 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Minus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| || || || |||||||| Sbjct: 137886 agtgtgtgggttgctagaaaccctcctggctttgcttt 137849
>gb|AC011753.6| Homo sapiens BAC clone RP11-537E18 from 2, complete sequence Length = 192802 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| || || || |||||||| Sbjct: 187902 agtgtgtgggttgctagaaaccctcctggctttgcttt 187939
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 450 ccgcagccgcagccgtagccgtagcc 475 ||||||||| |||||||||||||||| Sbjct: 116653 ccgcagccgtagccgtagccgtagcc 116628 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 455 gccgcagccgtagccgtagcc 475 ||||||||||||||||||||| Sbjct: 116654 gccgcagccgtagccgtagcc 116634
>dbj|AB046434.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F28L21 Length = 35187 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 gatatgaagtgctatgagtgtg 358 |||||||||||||||||||||| Sbjct: 24880 gatatgaagtgctatgagtgtg 24901
>gb|AF296829.1|F3D18 Arabidopsis thaliana BAC F3D18 Length = 88126 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 gatatgaagtgctatgagtgtg 358 |||||||||||||||||||||| Sbjct: 79620 gatatgaagtgctatgagtgtg 79641
>dbj|AP006296.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-137N23, complete sequence Length = 57462 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 166 agtgtgtgggttgctagaaagccaccaggatttgcttt 203 |||||||||||||||||||| ||| | || |||||||| Sbjct: 27778 agtgtgtgggttgctagaaacccatctggctttgcttt 27815
>dbj|AP001152.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-856F16, complete sequence Length = 91200 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 845 ggtcccctgcacagccacccca 866 |||||||||||||||||||||| Sbjct: 73121 ggtcccctgcacagccacccca 73100
>ref|XM_001232825.1| PREDICTED: Gallus gallus similar to Sh2d5 protein (LOC769539), mRNA Length = 981 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 560 caccaccgcctccccgcgcgcggagcatc 588 |||||||||| |||||||||||| ||||| Sbjct: 44 caccaccgcccccccgcgcgcggggcatc 72
>gb|BC018369.1| Mus musculus cDNA clone IMAGE:3963960, **** WARNING: chimeric clone **** Length = 3002 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctgctgctgcctgtcatggct 84 ||||||||||||||||||||| Sbjct: 2440 ctgctgctgcctgtcatggct 2460
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 cagccgtagccgtagcccaag 479 ||||||||||||||||||||| Sbjct: 852379 cagccgtagccgtagcccaag 852399
>ref|XM_876766.1| PREDICTED: Bos taurus similar to Band 4.1-like protein 3 (4.1B) (Differentially expressed in adenocarcinoma of the lung protein 1) (DAL-1) (DAL1P) (mDAL-1), transcript variant 7 (LOC532616), mRNA Length = 3905 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 719 gcgccagaagcatcagcaggt 739 ||||||||||||||||||||| Sbjct: 2180 gcgccagaagcatcagcaggt 2160
>ref|XM_865681.1| PREDICTED: Bos taurus similar to Band 4.1-like protein 3 (4.1B) (Differentially expressed in adenocarcinoma of the lung protein 1) (DAL-1) (DAL1P) (mDAL-1), transcript variant 2 (LOC532616), mRNA Length = 4469 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 719 gcgccagaagcatcagcaggt 739 ||||||||||||||||||||| Sbjct: 2744 gcgccagaagcatcagcaggt 2724
>ref|XM_876654.1| PREDICTED: Bos taurus similar to Band 4.1-like protein 3 (4.1B) (Differentially expressed in adenocarcinoma of the lung protein 1) (DAL-1) (DAL1P) (mDAL-1), transcript variant 6 (LOC532616), mRNA Length = 4025 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 719 gcgccagaagcatcagcaggt 739 ||||||||||||||||||||| Sbjct: 2300 gcgccagaagcatcagcaggt 2280
>ref|XM_611747.2| PREDICTED: Bos taurus similar to Band 4.1-like protein 3 (4.1B) (Differentially expressed in adenocarcinoma of the lung protein 1) (DAL-1) (DAL1P) (mDAL-1), transcript variant 1 (LOC532616), mRNA Length = 3500 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 719 gcgccagaagcatcagcaggt 739 ||||||||||||||||||||| Sbjct: 1775 gcgccagaagcatcagcaggt 1755
>ref|XM_876464.1| PREDICTED: Bos taurus similar to Band 4.1-like protein 3 (4.1B) (Differentially expressed in adenocarcinoma of the lung protein 1) (DAL-1) (DAL1P) (mDAL-1), transcript variant 4 (LOC532616), mRNA Length = 3629 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 719 gcgccagaagcatcagcaggt 739 ||||||||||||||||||||| Sbjct: 2021 gcgccagaagcatcagcaggt 2001
>ref|XM_876411.1| PREDICTED: Bos taurus similar to Band 4.1-like protein 3 (4.1B) (Differentially expressed in adenocarcinoma of the lung protein 1) (DAL-1) (DAL1P) (mDAL-1), transcript variant 3 (LOC532616), mRNA Length = 3746 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 719 gcgccagaagcatcagcaggt 739 ||||||||||||||||||||| Sbjct: 2021 gcgccagaagcatcagcaggt 2001
>gb|AC079443.48| Mus musculus strain C57BL/6J clone rp23-381f7 map 6, complete sequence Length = 207091 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 843 caggtcccctgcacagccacc 863 ||||||||||||||||||||| Sbjct: 3523 caggtcccctgcacagccacc 3543
>gb|AC006945.17| Mus musculus strain 129/Sv clone ct7-453l13 map 6, complete sequence Length = 120311 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 843 caggtcccctgcacagccacc 863 ||||||||||||||||||||| Sbjct: 57554 caggtcccctgcacagccacc 57574
>ref|XM_390565.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10389.1) partial mRNA Length = 3186 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 451 cgcagccgcagccgtagccgtagcc 475 |||||||||||||| |||||||||| Sbjct: 1591 cgcagccgcagccgaagccgtagcc 1615
>ref|NM_011596.2| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A2 (Atp6v0a2), mRNA dbj|AK155055.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630118L08 product:ATPase, H+ transporting, lysosomal V0 subunit a isoform 2, full insert sequence Length = 3515 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctgctgctgcctgtcatggct 84 ||||||||||||||||||||| Sbjct: 2464 ctgctgctgcctgtcatggct 2484
>dbj|AK170122.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630019L12 product:ATPase, H+ transporting, lysosomal V0 subunit a isoform 2, full insert sequence Length = 3526 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctgctgctgcctgtcatggct 84 ||||||||||||||||||||| Sbjct: 2984 ctgctgctgcctgtcatggct 3004
>dbj|AK032909.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720470P11 product:T-cell expressing clone j6, full insert sequence Length = 3244 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctgctgctgcctgtcatggct 84 ||||||||||||||||||||| Sbjct: 1241 ctgctgctgcctgtcatggct 1261
>gb|AE011759.1| Xanthomonas axonopodis pv. citri str. 306, section 137 of 469 of the complete genome Length = 10210 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cccgattcgccaatccccaatcccc 38 ||||| ||||||||||||||||||| Sbjct: 4211 cccgactcgccaatccccaatcccc 4187
>gb|AC008602.8| Homo sapiens chromosome 5 clone CTB-107J24, complete sequence Length = 106301 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 921 ggaagtgttgtggggtggggg 941 ||||||||||||||||||||| Sbjct: 43075 ggaagtgttgtggggtggggg 43055
>gb|AE012176.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 84 of 460 of the complete genome Length = 12556 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cccgattcgccaatccccaatcccc 38 |||||||| |||||||||||||||| Sbjct: 7641 cccgattccccaatccccaatcccc 7665
>gb|BC108991.1| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A2, mRNA (cDNA clone MGC:124341 IMAGE:40047832), complete cds Length = 2642 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctgctgctgcctgtcatggct 84 ||||||||||||||||||||| Sbjct: 2384 ctgctgctgcctgtcatggct 2404
>gb|BC108992.1| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A2, mRNA (cDNA clone MGC:124342 IMAGE:40047833), complete cds Length = 2642 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctgctgctgcctgtcatggct 84 ||||||||||||||||||||| Sbjct: 2384 ctgctgctgcctgtcatggct 2404
>dbj|AK017467.1| Mus musculus 6 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5630400L08 product:T-cell expressing clone j6, full insert sequence Length = 1561 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctgctgctgcctgtcatggct 84 ||||||||||||||||||||| Sbjct: 511 ctgctgctgcctgtcatggct 531
>gb|AF388674.1|AF388674 Mus musculus SHIF protein mRNA, complete cds Length = 1223 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctgctgctgcctgtcatggct 84 ||||||||||||||||||||| Sbjct: 661 ctgctgctgcctgtcatggct 681
>gb|AC093529.2| Homo sapiens chromosome 5 clone RP11-29K14, complete sequence Length = 109306 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1112 ttctgtaacatttgtactgat 1132 ||||||||||||||||||||| Sbjct: 94642 ttctgtaacatttgtactgat 94662
>gb|AC093208.2| Homo sapiens chromosome 5 clone CTC-493D22, complete sequence Length = 112115 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 921 ggaagtgttgtggggtggggg 941 ||||||||||||||||||||| Sbjct: 89690 ggaagtgttgtggggtggggg 89710
>emb|BX071410.1|CNS09R9I Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC8DG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 959 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 gccgcagccgtagccgtagcc 475 ||||||||||||||||||||| Sbjct: 434 gccgcagccgtagccgtagcc 454
>emb|BX063465.1|CNS09L4T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC45BB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 936 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 455 gccgcagccgtagccgtagcc 475 ||||||||||||||||||||| Sbjct: 801 gccgcagccgtagccgtagcc 781
>emb|BX063464.1|CNS09L4S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC45BB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 943 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 gccgcagccgtagccgtagcc 475 ||||||||||||||||||||| Sbjct: 751 gccgcagccgtagccgtagcc 771
>gb|AC027323.5| Homo sapiens chromosome 5 clone CTD-2034A10, complete sequence Length = 140016 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1112 ttctgtaacatttgtactgat 1132 ||||||||||||||||||||| Sbjct: 489 ttctgtaacatttgtactgat 509
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cccgattcgccaatccccaatcccc 38 |||||||| |||||||||||||||| Sbjct: 4116403 cccgattccccaatccccaatcccc 4116379
>gb|AC002056.1| Homo sapiens Chromosome 22q13 Cosmid Clone n94h12, complete sequence Length = 43454 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 tccccccttggaggcgctccc 54 ||||||||||||||||||||| Sbjct: 16826 tccccccttggaggcgctccc 16806
>gb|AC000036.5| Homo sapiens Chromosome 22q13 Cosmid Clone n85a3, complete sequence Length = 43847 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 tccccccttggaggcgctccc 54 ||||||||||||||||||||| Sbjct: 42256 tccccccttggaggcgctccc 42236
>gb|AC010431.7|AC010431 Homo sapiens chromosome 5 clone CTD-2201G3, complete sequence Length = 126750 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 921 ggaagtgttgtggggtggggg 941 ||||||||||||||||||||| Sbjct: 46054 ggaagtgttgtggggtggggg 46074
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 475 ccaagataccgcaggagcccaagctatgg 503 ||||||||| | ||||||||||||||||| Sbjct: 73600 ccaagatacagaaggagcccaagctatgg 73628
>emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BAC clone F3L17 (ESSA project) Length = 94319 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 475 ccaagataccgcaggagcccaagctatgg 503 ||||||||| | ||||||||||||||||| Sbjct: 85535 ccaagatacagaaggagcccaagctatgg 85563
>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII project) Length = 90902 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 475 ccaagataccgcaggagcccaagctatgg 503 ||||||||| | ||||||||||||||||| Sbjct: 79671 ccaagatacagaaggagcccaagctatgg 79643
>gb|AC008476.5|AC008476 Homo sapiens chromosome 5 clone CTC-380F16, complete sequence Length = 71549 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 921 ggaagtgttgtggggtggggg 941 ||||||||||||||||||||| Sbjct: 4745 ggaagtgttgtggggtggggg 4765
>dbj|AK100155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E12, full insert sequence Length = 1603 Score = 42.1 bits (21), Expect = 4.4 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 450 ccgcagccgcagccgtagccgtagcccaa 478 ||||||||||||||| ||||||||||||| Sbjct: 626 ccgcagccgcagccg-agccgtagcccaa 653
>gb|AF218252.1|AF218252 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit isoform a2 mRNA, complete cds Length = 3037 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctgctgctgcctgtcatggct 84 ||||||||||||||||||||| Sbjct: 2472 ctgctgctgcctgtcatggct 2492
>gb|AY815018.1| Schistosoma japonicum clone SJCHGC01413 unknown mRNA Length = 564 Score = 42.1 bits (21), Expect = 4.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 172 tgggttgctagaaagccaccaggatttgctttcatcg 208 |||||||| |||| ||||||||||||||||| |||| Sbjct: 146 tgggttgcccgaaatccaccaggatttgcttttatcg 182
>gb|AC083894.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-259j8, complete sequence Length = 167273 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 843 caggtcccctgcacagccacc 863 ||||||||||||||||||||| Sbjct: 22032 caggtcccctgcacagccacc 22012
>dbj|AB022323.1| Mus musculus mRNA for a2 subunit of vacuolar-adenosine triphosphatase, complete cds Length = 2903 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctgctgctgcctgtcatggct 84 ||||||||||||||||||||| Sbjct: 2453 ctgctgctgcctgtcatggct 2473 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 173,922,107 Number of extensions: 9472360 Number of successful extensions: 217076 Number of sequences better than 10.0: 140 Number of HSP's gapped: 217073 Number of HSP's successfully gapped: 222 Length of query: 1170 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1147 Effective length of database: 18,503,978,556 Effective search space: 21224063403732 Effective search space used: 21224063403732 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)