ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf92n23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001072310.1| Oryza sativa (japonica cultivar-group) Os11g0153400 (Os11g0153400) mRNA, complete cds Length = 2196 Score = 959 bits (484), Expect = 0.0 Identities = 680/744 (91%), Gaps = 1/744 (0%) Strand = Plus / Plus Query: 779 gcgggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgaca 838 ||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 756 gcgggatggagattgggtggccgacggatgtgcagcacgtggcacacgtcaccttcgaca 815 Query: 839 ggttccatggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctc 898 ||||||||||||||||||| || ||||| ||| ||||||||||||| |||||||| |||| Sbjct: 816 ggttccatggattcctcggcctccccgtggagctcgagcccgaggttccccgccgggctc 875 Query: 899 ccagtgccagtgctagtgtctttggcgtttcaacacaatcaatgcagtgttcatatgatt 958 ||||||| ||||| ||||||||||||||||||||| |||||||||| ||||| || |||| Sbjct: 876 ccagtgcgagtgcaagtgtctttggcgtttcaacagaatcaatgcaatgttcctacgatt 935 Query: 959 ccagaggaaacagtgttccaacgattctcttgatgatgcaaagacgtctttatgaacaag 1018 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 ccagaggaaacagtgtaccaacgattctcttgatgatgcaaagacgtctttatgaacaag 995 Query: 1019 gcggtcttcgggcagaaggtatttttcgtataaatgcggagaatagccaggaagag-ttg 1077 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 996 gcggtcttcgggcagaaggtatttttcgtataaatgcagagaatagccaggaggagtttg 1055 Query: 1078 tgcgagatcacttaaatagtggatctgtgccggatggcattgatgttcactgtttggcgg 1137 || ||||||| |||||||||||| ||||||||||||||||||| ||||||||||| | | Sbjct: 1056 tgagagatcagttaaatagtggaattgtgccggatggcattgatattcactgtttgtcag 1115 Query: 1138 gtctaatcaaagcctggtttagggaactgccgagtggggtgctggattctatcccacctg 1197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1116 gtctaatcaaagcctggtttagggaactgccgagtggggtgctggattctatcccacctg 1175 Query: 1198 aacaggtgatgcagtgccaatctgaagaggactgtgctcgggttgccaaatgccttccac 1257 ||||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 1176 aacaggtgatgcaatgccaatctgaagaggattgtgctcgagtcgccaaatgccttccac 1235 Query: 1258 caactgaatcagccttacttgactgggctgttaatttgatggctgatgttgtccaagaag 1317 || ||||| |||| |||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 1236 cagctgaagcagctttacttgagtgggcagttaatttaatggctgatgttgtccaagaag 1295 Query: 1318 aacagataaacaagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgaccc 1377 |||||||||||||||||| | ||| || ||||||||||||| |||||||||||||| | Sbjct: 1296 aacagataaacaagatgaatgctcgtaacattgctatggtttttgcaccaaatatgactc 1355 Query: 1378 agatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 ||||| |||| || ||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 1356 agatgtcagatccattgaccgcactgatgtatgcggtgcaagtgatgaattttctcaaga 1415 Query: 1438 tgctaatacagaagaccctcaaggatagagaggagtccaacctggaagaagcctctttgc 1497 |||||||||||||||||||||||| |||| | |||||||| ||||| || | ||| ||| Sbjct: 1416 tgctaatacagaagaccctcaagggtagacaagagtccaatctggaggacacatctctgc 1475 Query: 1498 cacagaaggacccatctgacgaaa 1521 | || |||||||||||||| |||| Sbjct: 1476 cccataaggacccatctgatgaaa 1499 Score = 87.7 bits (44), Expect = 2e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctggtccttcttggcgctgcttctcgagctgctaaggaagtc 731 |||||||||||||||| | ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 655 ggaggaggaggaggagaggtggtcgttcttggcgctgctgcttgagctgctgcggaagtc 714 Query: 732 gctgctccggtg 743 |||||||||||| Sbjct: 715 gctgctccggtg 726 Score = 71.9 bits (36), Expect = 9e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 1805 ccgaagcatgaatagcaggaggactagaaagggcaagcggcagtgcggaacgcccaccgc 1864 ||||||| ||||||| |||||||| ||||||||||| |||||| |||||| || | Sbjct: 1795 ccgaagcctgaatagtaggaggacaagaaagggcaaagggcagtctggaacgagtgccac 1854 Query: 1865 tcctccagctgagaaatcgaggggcgcgagcatcgtgagccggataaactccaaggtcga 1924 | | ||||||||||||| | ||| ||||||| || |||||||||||||||||| | || Sbjct: 1855 ttcctcagctgagaaatcaaaaggcacgagcattgtaagccggataaactccaagattga 1914 Query: 1925 acggatcgaagcgtggaggt 1944 ||| || ||||| ||||||| Sbjct: 1915 acgaattgaagcatggaggt 1934 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 495 gacggaggtggcgctgttccggggcccgaccaacctcgcttcgcccgcaagc 546 ||||||||||||||| |||| |||||||||||||||||||| ||| ||||| Sbjct: 502 gacggaggtggcgctcctccgtggcccgaccaacctcgcttcccccacaagc 553
>dbj|AK071807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110A09, full insert sequence Length = 2197 Score = 959 bits (484), Expect = 0.0 Identities = 680/744 (91%), Gaps = 1/744 (0%) Strand = Plus / Plus Query: 779 gcgggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgaca 838 ||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 758 gcgggatggagattgggtggccgacggatgtgcagcacgtggcacacgtcaccttcgaca 817 Query: 839 ggttccatggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctc 898 ||||||||||||||||||| || ||||| ||| ||||||||||||| |||||||| |||| Sbjct: 818 ggttccatggattcctcggcctccccgtggagctcgagcccgaggttccccgccgggctc 877 Query: 899 ccagtgccagtgctagtgtctttggcgtttcaacacaatcaatgcagtgttcatatgatt 958 ||||||| ||||| ||||||||||||||||||||| |||||||||| ||||| || |||| Sbjct: 878 ccagtgcgagtgcaagtgtctttggcgtttcaacagaatcaatgcaatgttcctacgatt 937 Query: 959 ccagaggaaacagtgttccaacgattctcttgatgatgcaaagacgtctttatgaacaag 1018 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 ccagaggaaacagtgtaccaacgattctcttgatgatgcaaagacgtctttatgaacaag 997 Query: 1019 gcggtcttcgggcagaaggtatttttcgtataaatgcggagaatagccaggaagag-ttg 1077 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| Sbjct: 998 gcggtcttcgggcagaaggtatttttcgtataaatgcagagaatagccaggaggagtttg 1057 Query: 1078 tgcgagatcacttaaatagtggatctgtgccggatggcattgatgttcactgtttggcgg 1137 || ||||||| |||||||||||| ||||||||||||||||||| ||||||||||| | | Sbjct: 1058 tgagagatcagttaaatagtggaattgtgccggatggcattgatattcactgtttgtcag 1117 Query: 1138 gtctaatcaaagcctggtttagggaactgccgagtggggtgctggattctatcccacctg 1197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1118 gtctaatcaaagcctggtttagggaactgccgagtggggtgctggattctatcccacctg 1177 Query: 1198 aacaggtgatgcagtgccaatctgaagaggactgtgctcgggttgccaaatgccttccac 1257 ||||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 1178 aacaggtgatgcaatgccaatctgaagaggattgtgctcgagtcgccaaatgccttccac 1237 Query: 1258 caactgaatcagccttacttgactgggctgttaatttgatggctgatgttgtccaagaag 1317 || ||||| |||| |||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 1238 cagctgaagcagctttacttgagtgggcagttaatttaatggctgatgttgtccaagaag 1297 Query: 1318 aacagataaacaagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgaccc 1377 |||||||||||||||||| | ||| || ||||||||||||| |||||||||||||| | Sbjct: 1298 aacagataaacaagatgaatgctcgtaacattgctatggtttttgcaccaaatatgactc 1357 Query: 1378 agatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 ||||| |||| || ||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 1358 agatgtcagatccattgaccgcactgatgtatgcggtgcaagtgatgaattttctcaaga 1417 Query: 1438 tgctaatacagaagaccctcaaggatagagaggagtccaacctggaagaagcctctttgc 1497 |||||||||||||||||||||||| |||| | |||||||| ||||| || | ||| ||| Sbjct: 1418 tgctaatacagaagaccctcaagggtagacaagagtccaatctggaggacacatctctgc 1477 Query: 1498 cacagaaggacccatctgacgaaa 1521 | || |||||||||||||| |||| Sbjct: 1478 cccataaggacccatctgatgaaa 1501 Score = 87.7 bits (44), Expect = 2e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctggtccttcttggcgctgcttctcgagctgctaaggaagtc 731 |||||||||||||||| | ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 657 ggaggaggaggaggagaggtggtcgttcttggcgctgctgcttgagctgctgcggaagtc 716 Query: 732 gctgctccggtg 743 |||||||||||| Sbjct: 717 gctgctccggtg 728 Score = 71.9 bits (36), Expect = 9e-09 Identities = 115/140 (82%), Gaps = 1/140 (0%) Strand = Plus / Plus Query: 1805 ccgaagcatgaatagcaggaggactagaaagggcaagcggcagtgcggaacgcccaccgc 1864 ||||||| ||||||| |||||||| |||||||||||| |||||| |||||| || | Sbjct: 1797 ccgaagcctgaatagtaggaggacaagaaagggcaag-ggcagtctggaacgagtgccac 1855 Query: 1865 tcctccagctgagaaatcgaggggcgcgagcatcgtgagccggataaactccaaggtcga 1924 | | ||||||||||||| | ||| ||||||| || |||||||||||||||||| | || Sbjct: 1856 ttcctcagctgagaaatcaaaaggcacgagcattgtaagccggataaactccaagattga 1915 Query: 1925 acggatcgaagcgtggaggt 1944 ||| || ||||| ||||||| Sbjct: 1916 acgaattgaagcatggaggt 1935 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 495 gacggaggtggcgctgttccggggcccgaccaacctcgcttcgcccgcaagc 546 ||||||||||||||| |||| |||||||||||||||||||| ||| ||||| Sbjct: 504 gacggaggtggcgctcctccgtggcccgaccaacctcgcttcccccacaagc 555
>ref|NM_001072725.1| Oryza sativa (japonica cultivar-group) Os12g0155200 (Os12g0155200) mRNA, partial cds Length = 1997 Score = 450 bits (227), Expect = e-122 Identities = 338/371 (91%), Gaps = 3/371 (0%) Strand = Plus / Plus Query: 781 gggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgacagg 840 ||||||||||| ||| ||| ||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 190 gggatggagatagggtggccgacggacgtgcagcacgtggcgcacgtcaccttcgatagg 249 Query: 841 ttccatggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctccc 900 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 250 ttccatggattcctcgggctccccgtggagttcgagcccgaggtgccccgccgcgctccc 309 Query: 901 agtgccagtgctagtgtctttggcgtttcaacacaatcaatgcagtgttcatatgattcc 960 ||||| ||||| ||||||||||| ||||||||| |||| |||||||| || ||||||||| Sbjct: 310 agtgcgagtgcaagtgtctttggagtttcaacagaatcgatgcagtgctcctatgattcc 369 Query: 961 agaggaaacagtgttccaacgattctcttgatgatgcaaagacgtctttatgaacaaggc 1020 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 370 agaggaaacagtgtcccaacaattctcttgatgatgcaaagacgtctttatgaacaaggc 429 Query: 1021 ggtcttcgggcagaaggtatttttcgtataaatgcggagaatagccaggaagag-ttgtg 1079 |||||||||||||||||||||||||| |||||||| ||||||||||| |||||| ||||| Sbjct: 430 ggtcttcgggcagaaggtatttttcgcataaatgcagagaatagccaagaagagcttgtg 489 Query: 1080 cgagatcacttaaatagt-ggatctgtgccggatggcattgatgttcactgtttggcggg 1138 |||| || |||||| || ||||| ||||| || || |||||||| ||||||||||| || Sbjct: 490 agagaccaattaaatggtgggatc-gtgccagagggtattgatgtccactgtttggcagg 548 Query: 1139 tctaatcaaag 1149 ||||||||||| Sbjct: 549 tctaatcaaag 559 Score = 448 bits (226), Expect = e-122 Identities = 409/470 (87%) Strand = Plus / Plus Query: 1149 gcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatg 1208 ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 924 gcctggtttagggaactcccgagtggggtgctggactcaatcccacctgaacaggtgatg 983 Query: 1209 cagtgccaatctgaagaggactgtgctcgggttgccaaatgccttccaccaactgaatca 1268 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 984 caatgccagtctgaagaggactgtgctcgtgttgccaaatgccttccaccaactgaagca 1043 Query: 1269 gccttacttgactgggctgttaatttgatggctgatgttgtccaagaagaacagataaac 1328 |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 1044 gccttactagactgggctgttaatttgatggctgatgttgtccaagaagagcaaataaac 1103 Query: 1329 aagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgacccagatggcagac 1388 ||||||| | |||||| |||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1104 aagatgaatgcgcgcaatattgccatggtttttgcaccaaatatgactcagatggcagat 1163 Query: 1389 cctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaagatgctaatacag 1448 || ||||||||| | |||||||| || |||||||||||||| || |||||||||||||| Sbjct: 1164 cccttgactgcattgatgtatgcagtacaagtgatgaattttcttaagatgctaatacaa 1223 Query: 1449 aagaccctcaaggatagagaggagtccaacctggaagaagcctctttgccacagaaggac 1508 || ||||||||||||||||| ||||| | ||||| || ||| | || ||||||||| Sbjct: 1224 aaaaccctcaaggatagagaagagtctgatctggatgatttgtctcttcctcagaaggac 1283 Query: 1509 ccatctgacgaaaacggccatcagaaccccagtctccccgttaatcctcaacctgaagaa 1568 || ||||| ||||| || || |||| | || | ||| | || || |||| ||||| ||| Sbjct: 1284 ccgtctgatgaaaatggacaccagaccaccggcctctcgcttgattctcaccctgacgaa 1343 Query: 1569 atatccaggcgcccctctttcgtcagcgaggagccccttgtgtacagtcc 1618 ||||||||| ||||||||||||||||||||||||||| || ||||||| Sbjct: 1344 ggatccaggcgtccctctttcgtcagcgaggagccccttctgaacagtcc 1393 Score = 101 bits (51), Expect = 1e-17 Identities = 84/95 (88%) Strand = Plus / Plus Query: 669 atcggaggaggaggaggagcgctggtccttcttggcgctgcttctcgagctgctaaggaa 728 ||||||||||||||||||| ||||| |||||||||||||| |||| |||||| |||| Sbjct: 87 atcggaggaggaggaggaggagtggtcgttcttggcgctgctgctcgcgctgctgcggaa 146 Query: 729 gtcgctgctccggtgtagggcggaggacggcggcg 763 |||||||||| |||| || |||||||||||||||| Sbjct: 147 gtcgctgctcgggtgcagcgcggaggacggcggcg 181 Score = 101 bits (51), Expect = 1e-17 Identities = 132/159 (83%) Strand = Plus / Plus Query: 1782 aacttacttccaagcagagggaaccgaagcatgaatagcaggaggactagaaagggcaag 1841 |||||||||| | ||| ||||| ||| ||| ||||||| ||||||||||||||||||||| Sbjct: 1566 aacttacttcaaggcaaagggagccgtagcctgaatagtaggaggactagaaagggcaag 1625 Query: 1842 cggcagtgcggaacgcccaccgctcctccagctgagaaatcgaggggcgcgagcatcgtg 1901 ||||| ||||| | | ||||| || |||||||||| | || |||||||| ||| Sbjct: 1626 gtgcagtttggaacacgtgctgctccagcatctgagaaatcaaaaggtgcgagcattgtg 1685 Query: 1902 agccggataaactccaaggtcgaacggatcgaagcgtgg 1940 ||| |||||||||| ||||| |||||||||||||||||| Sbjct: 1686 agcaggataaactcaaaggttgaacggatcgaagcgtgg 1724 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1967 ttgttgttgtgtaatagatgactgacccagtgtt 2000 ||||||||||| | ||||||||||||||| |||| Sbjct: 1750 ttgttgttgtgaagtagatgactgacccaatgtt 1783
>dbj|AK067300.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106C08, full insert sequence Length = 1998 Score = 448 bits (226), Expect = e-122 Identities = 409/470 (87%) Strand = Plus / Plus Query: 1149 gcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatg 1208 ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 925 gcctggtttagggaactcccgagtggggtgctggactcaatcccacctgaacaggtgatg 984 Query: 1209 cagtgccaatctgaagaggactgtgctcgggttgccaaatgccttccaccaactgaatca 1268 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 985 caatgccagtctgaagaggactgtgctcgtgttgccaaatgccttccaccaactgaagca 1044 Query: 1269 gccttacttgactgggctgttaatttgatggctgatgttgtccaagaagaacagataaac 1328 |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 1045 gccttactagactgggctgttaatttgatggctgatgttgtccaagaagagcaaataaac 1104 Query: 1329 aagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgacccagatggcagac 1388 ||||||| | |||||| |||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1105 aagatgaatgcgcgcaatattgccatggtttttgcaccaaatatgactcagatggcagat 1164 Query: 1389 cctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaagatgctaatacag 1448 || ||||||||| | |||||||| || |||||||||||||| || |||||||||||||| Sbjct: 1165 cccttgactgcattgatgtatgcagtacaagtgatgaattttcttaagatgctaatacaa 1224 Query: 1449 aagaccctcaaggatagagaggagtccaacctggaagaagcctctttgccacagaaggac 1508 || ||||||||||||||||| ||||| | ||||| || ||| | || ||||||||| Sbjct: 1225 aaaaccctcaaggatagagaagagtctgatctggatgatttgtctcttcctcagaaggac 1284 Query: 1509 ccatctgacgaaaacggccatcagaaccccagtctccccgttaatcctcaacctgaagaa 1568 || ||||| ||||| || || |||| | || | ||| | || || |||| ||||| ||| Sbjct: 1285 ccgtctgatgaaaatggacaccagaccaccggcctctcgcttgattctcaccctgacgaa 1344 Query: 1569 atatccaggcgcccctctttcgtcagcgaggagccccttgtgtacagtcc 1618 ||||||||| ||||||||||||||||||||||||||| || ||||||| Sbjct: 1345 ggatccaggcgtccctctttcgtcagcgaggagccccttctgaacagtcc 1394 Score = 442 bits (223), Expect = e-120 Identities = 337/371 (90%), Gaps = 3/371 (0%) Strand = Plus / Plus Query: 781 gggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgacagg 840 ||||||||||| ||| ||| ||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 191 gggatggagatagggtggccgacggacgtgcagcacgtggcgcacgtcaccttcgatagg 250 Query: 841 ttccatggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctccc 900 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 251 ttccatggattcctcgggctccccgtggagttcgagcccgaggtgccccgccgcgctccc 310 Query: 901 agtgccagtgctagtgtctttggcgtttcaacacaatcaatgcagtgttcatatgattcc 960 ||||| ||||| ||||||||||| ||||||||| |||| |||||||| || ||||||||| Sbjct: 311 agtgcgagtgcaagtgtctttggagtttcaacagaatcgatgcagtgctcctatgattcc 370 Query: 961 agaggaaacagtgttccaacgattctcttgatgatgcaaagacgtctttatgaacaaggc 1020 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 371 agaggaaacagtgtcccaacaattctcttgatgatgcaaagacgtctttatgaacaaggc 430 Query: 1021 ggtcttcgggcagaaggtatttttcgtataaatgcggagaatagccaggaagag-ttgtg 1079 |||||||||||||||||||||||||| |||| ||| ||||||||||| |||||| ||||| Sbjct: 431 ggtcttcgggcagaaggtatttttcgcataagtgcagagaatagccaagaagagcttgtg 490 Query: 1080 cgagatcacttaaatagt-ggatctgtgccggatggcattgatgttcactgtttggcggg 1138 |||| || |||||| || ||||| ||||| || || |||||||| ||||||||||| || Sbjct: 491 agagaccaattaaatggtgggatc-gtgccagagggtattgatgtccactgtttggcagg 549 Query: 1139 tctaatcaaag 1149 ||||||||||| Sbjct: 550 tctaatcaaag 560 Score = 101 bits (51), Expect = 1e-17 Identities = 84/95 (88%) Strand = Plus / Plus Query: 669 atcggaggaggaggaggagcgctggtccttcttggcgctgcttctcgagctgctaaggaa 728 ||||||||||||||||||| ||||| |||||||||||||| |||| |||||| |||| Sbjct: 88 atcggaggaggaggaggaggagtggtcgttcttggcgctgctgctcgcgctgctgcggaa 147 Query: 729 gtcgctgctccggtgtagggcggaggacggcggcg 763 |||||||||| |||| || |||||||||||||||| Sbjct: 148 gtcgctgctcgggtgcagcgcggaggacggcggcg 182 Score = 101 bits (51), Expect = 1e-17 Identities = 132/159 (83%) Strand = Plus / Plus Query: 1782 aacttacttccaagcagagggaaccgaagcatgaatagcaggaggactagaaagggcaag 1841 |||||||||| | ||| ||||| ||| ||| ||||||| ||||||||||||||||||||| Sbjct: 1567 aacttacttcaaggcaaagggagccgtagcctgaatagtaggaggactagaaagggcaag 1626 Query: 1842 cggcagtgcggaacgcccaccgctcctccagctgagaaatcgaggggcgcgagcatcgtg 1901 ||||| ||||| | | ||||| || |||||||||| | || |||||||| ||| Sbjct: 1627 gtgcagtttggaacacgtgctgctccagcatctgagaaatcaaaaggtgcgagcattgtg 1686 Query: 1902 agccggataaactccaaggtcgaacggatcgaagcgtgg 1940 ||| |||||||||| ||||| |||||||||||||||||| Sbjct: 1687 agcaggataaactcaaaggttgaacggatcgaagcgtgg 1725 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1967 ttgttgttgtgtaatagatgactgacccagtgtt 2000 ||||||||||| | ||||||||||||||| |||| Sbjct: 1751 ttgttgttgtgaagtagatgactgacccaatgtt 1784
>gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032M21 map C83B, complete sequence Length = 48636 Score = 315 bits (159), Expect = 4e-82 Identities = 210/227 (92%) Strand = Plus / Plus Query: 1149 gcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatg 1208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21337 gcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatg 21396 Query: 1209 cagtgccaatctgaagaggactgtgctcgggttgccaaatgccttccaccaactgaatca 1268 || ||||||||||||||||| |||||||| || |||||||||||||||||| ||||| || Sbjct: 21397 caatgccaatctgaagaggattgtgctcgagtcgccaaatgccttccaccagctgaagca 21456 Query: 1269 gccttacttgactgggctgttaatttgatggctgatgttgtccaagaagaacagataaac 1328 || |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 21457 gctttacttgagtgggcagttaatttaatggctgatgttgtccaagaagaacagataaac 21516 Query: 1329 aagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgac 1375 ||||||| | ||| || ||||||||||||| |||||||||||||| Sbjct: 21517 aagatgaatgctcgtaacattgctatggtttttgcaccaaatatgac 21563 Score = 200 bits (101), Expect = 2e-47 Identities = 119/125 (95%) Strand = Plus / Plus Query: 906 cagtgctagtgtctttggcgtttcaacacaatcaatgcagtgttcatatgattccagagg 965 |||||| ||||||||||||||||||||| |||||||||| ||||| || ||||||||||| Sbjct: 20499 cagtgcaagtgtctttggcgtttcaacagaatcaatgcaatgttcctacgattccagagg 20558 Query: 966 aaacagtgttccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtct 1025 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20559 aaacagtgtaccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtct 20618 Query: 1026 tcggg 1030 ||||| Sbjct: 20619 tcggg 20623 Score = 165 bits (83), Expect = 8e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 779 gcgggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgaca 838 ||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 18442 gcgggatggagattgggtggccgacggatgtgcagcacgtggcacacgtcaccttcgaca 18501 Query: 839 ggttccatggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctc 898 ||||||||||||||||||| || ||||| ||| ||||||||||||| |||||||| |||| Sbjct: 18502 ggttccatggattcctcggcctccccgtggagctcgagcccgaggttccccgccgggctc 18561 Query: 899 ccagtgc 905 ||||||| Sbjct: 18562 ccagtgc 18568 Score = 155 bits (78), Expect = 8e-34 Identities = 112/122 (91%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 1029 ggcagaaggtatttttcgtataaatgcggagaatagccaggaagagtt-gtgcgagatca 1087 ||||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||||| Sbjct: 20746 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagtttgtgagagatca 20805 Query: 1088 cttaaatagtggatctgtgccggatggcattgatgttcactgtttggcgggtctaatcaa 1147 |||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||| Sbjct: 20806 gttaaatagtggaattgtgccggatggcattgatattcactgtttgtcaggtctaatcaa 20865 Query: 1148 ag 1149 || Sbjct: 20866 ag 20867 Score = 145 bits (73), Expect = 8e-31 Identities = 127/145 (87%) Strand = Plus / Plus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 |||||| |||| || ||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 21642 cagatgtcagatccattgaccgcactgatgtatgcggtgcaagtgatgaattttctcaag 21701 Query: 1437 atgctaatacagaagaccctcaaggatagagaggagtccaacctggaagaagcctctttg 1496 ||||||||||||||||||||||||| |||| | |||||||| ||||| || | ||| || Sbjct: 21702 atgctaatacagaagaccctcaagggtagacaagagtccaatctggaggacacatctctg 21761 Query: 1497 ccacagaaggacccatctgacgaaa 1521 || || |||||||||||||| |||| Sbjct: 21762 ccccataaggacccatctgatgaaa 21786 Score = 87.7 bits (44), Expect = 2e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctggtccttcttggcgctgcttctcgagctgctaaggaagtc 731 |||||||||||||||| | ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 18341 ggaggaggaggaggagaggtggtcgttcttggcgctgctgcttgagctgctgcggaagtc 18400 Query: 732 gctgctccggtg 743 |||||||||||| Sbjct: 18401 gctgctccggtg 18412 Score = 71.9 bits (36), Expect = 9e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 1805 ccgaagcatgaatagcaggaggactagaaagggcaagcggcagtgcggaacgcccaccgc 1864 ||||||| ||||||| |||||||| ||||||||||| |||||| |||||| || | Sbjct: 22082 ccgaagcctgaatagtaggaggacaagaaagggcaaagggcagtctggaacgagtgccac 22141 Query: 1865 tcctccagctgagaaatcgaggggcgcgagcatcgtgagccggataaactccaaggtcga 1924 | | ||||||||||||| | ||| ||||||| || |||||||||||||||||| | || Sbjct: 22142 ttcctcagctgagaaatcaaaaggcacgagcattgtaagccggataaactccaagattga 22201 Query: 1925 acggatcgaagcgtggaggt 1944 ||| || ||||| ||||||| Sbjct: 22202 acgaattgaagcatggaggt 22221 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 495 gacggaggtggcgctgttccggggcccgaccaacctcgcttcgcccgcaagc 546 ||||||||||||||| |||| |||||||||||||||||||| ||| ||||| Sbjct: 18188 gacggaggtggcgctcctccgtggcccgaccaacctcgcttcccccacaagc 18239
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 315 bits (159), Expect = 4e-82 Identities = 210/227 (92%) Strand = Plus / Plus Query: 1149 gcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatg 1208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138994 gcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatg 139053 Query: 1209 cagtgccaatctgaagaggactgtgctcgggttgccaaatgccttccaccaactgaatca 1268 || ||||||||||||||||| |||||||| || |||||||||||||||||| ||||| || Sbjct: 139054 caatgccaatctgaagaggattgtgctcgagtcgccaaatgccttccaccagctgaagca 139113 Query: 1269 gccttacttgactgggctgttaatttgatggctgatgttgtccaagaagaacagataaac 1328 || |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 139114 gctttacttgagtgggcagttaatttaatggctgatgttgtccaagaagaacagataaac 139173 Query: 1329 aagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgac 1375 ||||||| | ||| || ||||||||||||| |||||||||||||| Sbjct: 139174 aagatgaatgctcgtaacattgctatggtttttgcaccaaatatgac 139220 Score = 200 bits (101), Expect = 2e-47 Identities = 119/125 (95%) Strand = Plus / Plus Query: 906 cagtgctagtgtctttggcgtttcaacacaatcaatgcagtgttcatatgattccagagg 965 |||||| ||||||||||||||||||||| |||||||||| ||||| || ||||||||||| Sbjct: 138156 cagtgcaagtgtctttggcgtttcaacagaatcaatgcaatgttcctacgattccagagg 138215 Query: 966 aaacagtgttccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtct 1025 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138216 aaacagtgtaccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtct 138275 Query: 1026 tcggg 1030 ||||| Sbjct: 138276 tcggg 138280 Score = 165 bits (83), Expect = 8e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 779 gcgggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgaca 838 ||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 136099 gcgggatggagattgggtggccgacggatgtgcagcacgtggcacacgtcaccttcgaca 136158 Query: 839 ggttccatggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctc 898 ||||||||||||||||||| || ||||| ||| ||||||||||||| |||||||| |||| Sbjct: 136159 ggttccatggattcctcggcctccccgtggagctcgagcccgaggttccccgccgggctc 136218 Query: 899 ccagtgc 905 ||||||| Sbjct: 136219 ccagtgc 136225 Score = 155 bits (78), Expect = 8e-34 Identities = 112/122 (91%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 1029 ggcagaaggtatttttcgtataaatgcggagaatagccaggaagagtt-gtgcgagatca 1087 ||||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||||| Sbjct: 138403 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagtttgtgagagatca 138462 Query: 1088 cttaaatagtggatctgtgccggatggcattgatgttcactgtttggcgggtctaatcaa 1147 |||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||| Sbjct: 138463 gttaaatagtggaattgtgccggatggcattgatattcactgtttgtcaggtctaatcaa 138522 Query: 1148 ag 1149 || Sbjct: 138523 ag 138524 Score = 145 bits (73), Expect = 8e-31 Identities = 127/145 (87%) Strand = Plus / Plus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 |||||| |||| || ||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 139299 cagatgtcagatccattgaccgcactgatgtatgcggtgcaagtgatgaattttctcaag 139358 Query: 1437 atgctaatacagaagaccctcaaggatagagaggagtccaacctggaagaagcctctttg 1496 ||||||||||||||||||||||||| |||| | |||||||| ||||| || | ||| || Sbjct: 139359 atgctaatacagaagaccctcaagggtagacaagagtccaatctggaggacacatctctg 139418 Query: 1497 ccacagaaggacccatctgacgaaa 1521 || || |||||||||||||| |||| Sbjct: 139419 ccccataaggacccatctgatgaaa 139443 Score = 87.7 bits (44), Expect = 2e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctggtccttcttggcgctgcttctcgagctgctaaggaagtc 731 |||||||||||||||| | ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 135998 ggaggaggaggaggagaggtggtcgttcttggcgctgctgcttgagctgctgcggaagtc 136057 Query: 732 gctgctccggtg 743 |||||||||||| Sbjct: 136058 gctgctccggtg 136069 Score = 71.9 bits (36), Expect = 9e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 1805 ccgaagcatgaatagcaggaggactagaaagggcaagcggcagtgcggaacgcccaccgc 1864 ||||||| ||||||| |||||||| ||||||||||| |||||| |||||| || | Sbjct: 139739 ccgaagcctgaatagtaggaggacaagaaagggcaaagggcagtctggaacgagtgccac 139798 Query: 1865 tcctccagctgagaaatcgaggggcgcgagcatcgtgagccggataaactccaaggtcga 1924 | | ||||||||||||| | ||| ||||||| || |||||||||||||||||| | || Sbjct: 139799 ttcctcagctgagaaatcaaaaggcacgagcattgtaagccggataaactccaagattga 139858 Query: 1925 acggatcgaagcgtggaggt 1944 ||| || ||||| ||||||| Sbjct: 139859 acgaattgaagcatggaggt 139878 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 495 gacggaggtggcgctgttccggggcccgaccaacctcgcttcgcccgcaagc 546 ||||||||||||||| |||| |||||||||||||||||||| ||| ||||| Sbjct: 135845 gacggaggtggcgctcctccgtggcccgaccaacctcgcttcccccacaagc 135896
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 315 bits (159), Expect = 4e-82 Identities = 210/227 (92%) Strand = Plus / Minus Query: 1149 gcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatg 1208 ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 2708705 gcctggtttagggaactcccgagtggggtgctggactcaatcccacctgaacaggtgatg 2708646 Query: 1209 cagtgccaatctgaagaggactgtgctcgggttgccaaatgccttccaccaactgaatca 1268 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 2708645 caatgccagtctgaagaggactgtgctcgtgttgccaaatgccttccaccaactgaagca 2708586 Query: 1269 gccttacttgactgggctgttaatttgatggctgatgttgtccaagaagaacagataaac 1328 |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 2708585 gccttactagactgggctgttaatttgatggctgatgttgtccaagaagagcaaataaac 2708526 Query: 1329 aagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgac 1375 ||||||| | |||||| |||| |||||||| |||||||||||||| Sbjct: 2708525 aagatgaatgcgcgcaatattgccatggtttttgcaccaaatatgac 2708479 Score = 184 bits (93), Expect = 9e-43 Identities = 117/125 (93%) Strand = Plus / Minus Query: 906 cagtgctagtgtctttggcgtttcaacacaatcaatgcagtgttcatatgattccagagg 965 |||||| ||||||||||| ||||||||| |||| |||||||| || |||||||||||||| Sbjct: 2709404 cagtgcaagtgtctttggagtttcaacagaatcgatgcagtgctcctatgattccagagg 2709345 Query: 966 aaacagtgttccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtct 1025 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2709344 aaacagtgtcccaacaattctcttgatgatgcaaagacgtctttatgaacaaggcggtct 2709285 Query: 1026 tcggg 1030 ||||| Sbjct: 2709284 tcggg 2709280 Score = 176 bits (89), Expect = 2e-40 Identities = 116/125 (92%) Strand = Plus / Minus Query: 781 gggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgacagg 840 ||||||||||| ||| ||| ||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 2711715 gggatggagatagggtggccgacggacgtgcagcacgtggcgcacgtcaccttcgatagg 2711656 Query: 841 ttccatggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctccc 900 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 2711655 ttccatggattcctcgggctccccgtggagttcgagcccgaggtgccccgccgcgctccc 2711596 Query: 901 agtgc 905 ||||| Sbjct: 2711595 agtgc 2711591 Score = 139 bits (70), Expect = 5e-29 Identities = 199/242 (82%) Strand = Plus / Minus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 ||||||||||| || ||||||||| | |||||||| || |||||||||||||| || ||| Sbjct: 2708398 cagatggcagatcccttgactgcattgatgtatgcagtacaagtgatgaattttcttaag 2708339 Query: 1437 atgctaatacagaagaccctcaaggatagagaggagtccaacctggaagaagcctctttg 1496 ||||||||||| || ||||||||||||||||| ||||| | ||||| || ||| | Sbjct: 2708338 atgctaatacaaaaaaccctcaaggatagagaagagtctgatctggatgatttgtctctt 2708279 Query: 1497 ccacagaaggacccatctgacgaaaacggccatcagaaccccagtctccccgttaatcct 1556 || ||||||||||| ||||| ||||| || || |||| | || | ||| | || || || Sbjct: 2708278 cctcagaaggacccgtctgatgaaaatggacaccagaccaccggcctctcgcttgattct 2708219 Query: 1557 caacctgaagaaatatccaggcgcccctctttcgtcagcgaggagccccttgtgtacagt 1616 || ||||| ||| ||||||||| ||||||||||||||||||||||||||| || ||||| Sbjct: 2708218 caccctgacgaaggatccaggcgtccctctttcgtcagcgaggagccccttctgaacagt 2708159 Query: 1617 cc 1618 || Sbjct: 2708158 cc 2708157 Score = 105 bits (53), Expect = 7e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 485 gaaaagcaatgacggaggtggcgctgttccggggcccgaccaacctcgcttcgcccgcaa 544 ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 2712035 gaaaagcaatggcggaggtggcgctcttccggggcccgaccaacctcgcttcacccgcaa 2711976 Query: 545 gccgc 549 ||||| Sbjct: 2711975 gccgc 2711971 Score = 101 bits (51), Expect = 1e-17 Identities = 132/159 (83%) Strand = Plus / Minus Query: 1782 aacttacttccaagcagagggaaccgaagcatgaatagcaggaggactagaaagggcaag 1841 |||||||||| | ||| ||||| ||| ||| ||||||| ||||||||||||||||||||| Sbjct: 2707984 aacttacttcaaggcaaagggagccgtagcctgaatagtaggaggactagaaagggcaag 2707925 Query: 1842 cggcagtgcggaacgcccaccgctcctccagctgagaaatcgaggggcgcgagcatcgtg 1901 ||||| ||||| | | ||||| || |||||||||| | || |||||||| ||| Sbjct: 2707924 gtgcagtttggaacacgtgctgctccagcatctgagaaatcaaaaggtgcgagcattgtg 2707865 Query: 1902 agccggataaactccaaggtcgaacggatcgaagcgtgg 1940 ||| |||||||||| ||||| |||||||||||||||||| Sbjct: 2707864 agcaggataaactcaaaggttgaacggatcgaagcgtgg 2707826 Score = 101 bits (51), Expect = 1e-17 Identities = 108/123 (87%), Gaps = 3/123 (2%) Strand = Plus / Minus Query: 1029 ggcagaaggtatttttcgtataaatgcggagaatagccaggaagag-ttgtgcgagatca 1087 |||||||||||||||||| |||||||| ||||||||||| |||||| ||||| |||| || Sbjct: 2709191 ggcagaaggtatttttcgcataaatgcagagaatagccaagaagagcttgtgagagacca 2709132 Query: 1088 cttaaatagt-ggatctgtgccggatggcattgatgttcactgtttggcgggtctaatca 1146 |||||| || ||||| ||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 2709131 attaaatggtgggatc-gtgccagagggtattgatgtccactgtttggcaggtctaatca 2709073 Query: 1147 aag 1149 ||| Sbjct: 2709072 aag 2709070 Score = 101 bits (51), Expect = 1e-17 Identities = 84/95 (88%) Strand = Plus / Minus Query: 669 atcggaggaggaggaggagcgctggtccttcttggcgctgcttctcgagctgctaaggaa 728 ||||||||||||||||||| ||||| |||||||||||||| |||| |||||| |||| Sbjct: 2711818 atcggaggaggaggaggaggagtggtcgttcttggcgctgctgctcgcgctgctgcggaa 2711759 Query: 729 gtcgctgctccggtgtagggcggaggacggcggcg 763 |||||||||| |||| || |||||||||||||||| Sbjct: 2711758 gtcgctgctcgggtgcagcgcggaggacggcggcg 2711724 Score = 83.8 bits (42), Expect = 2e-12 Identities = 81/94 (86%) Strand = Plus / Plus Query: 783 gatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgacaggtt 842 ||||||||| ||| ||| ||||| |||| ||||||||||||||||| |||||| | || Sbjct: 21243076 gatggagatcgggtggccgacggacgtgcgccacgtggcgcacgtcaccttcgaccgctt 21243135 Query: 843 ccatggattcctcgggcttcccgtcgagttcgag 876 |||||| |||||||| || ||||||||||||||| Sbjct: 21243136 ccatggcttcctcggcctccccgtcgagttcgag 21243169 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 accctcccttcaatccaactcca 32 ||||||||||||||||||||||| Sbjct: 2712472 accctcccttcaatccaactcca 2712450 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1967 ttgttgttgtgtaatagatgactgacccagtgtt 2000 ||||||||||| | ||||||||||||||| |||| Sbjct: 2707800 ttgttgttgtgaagtagatgactgacccaatgtt 2707767 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 307 cgccaccaagaactccactaccagga 332 |||||||||||||||||| ||||||| Sbjct: 2712186 cgccaccaagaactccaccaccagga 2712161 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1115 cattgatgttcactgtttggc 1135 ||||||||||||||||||||| Sbjct: 21244814 cattgatgttcactgtttggc 21244834
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 315 bits (159), Expect = 4e-82 Identities = 210/227 (92%) Strand = Plus / Plus Query: 1149 gcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatg 1208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2486897 gcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatg 2486956 Query: 1209 cagtgccaatctgaagaggactgtgctcgggttgccaaatgccttccaccaactgaatca 1268 || ||||||||||||||||| |||||||| || |||||||||||||||||| ||||| || Sbjct: 2486957 caatgccaatctgaagaggattgtgctcgagtcgccaaatgccttccaccagctgaagca 2487016 Query: 1269 gccttacttgactgggctgttaatttgatggctgatgttgtccaagaagaacagataaac 1328 || |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2487017 gctttacttgagtgggcagttaatttaatggctgatgttgtccaagaagaacagataaac 2487076 Query: 1329 aagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgac 1375 ||||||| | ||| || ||||||||||||| |||||||||||||| Sbjct: 2487077 aagatgaatgctcgtaacattgctatggtttttgcaccaaatatgac 2487123 Score = 200 bits (101), Expect = 2e-47 Identities = 119/125 (95%) Strand = Plus / Plus Query: 906 cagtgctagtgtctttggcgtttcaacacaatcaatgcagtgttcatatgattccagagg 965 |||||| ||||||||||||||||||||| |||||||||| ||||| || ||||||||||| Sbjct: 2486059 cagtgcaagtgtctttggcgtttcaacagaatcaatgcaatgttcctacgattccagagg 2486118 Query: 966 aaacagtgttccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtct 1025 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2486119 aaacagtgtaccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtct 2486178 Query: 1026 tcggg 1030 ||||| Sbjct: 2486179 tcggg 2486183 Score = 165 bits (83), Expect = 8e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 779 gcgggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgaca 838 ||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 2484002 gcgggatggagattgggtggccgacggatgtgcagcacgtggcacacgtcaccttcgaca 2484061 Query: 839 ggttccatggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctc 898 ||||||||||||||||||| || ||||| ||| ||||||||||||| |||||||| |||| Sbjct: 2484062 ggttccatggattcctcggcctccccgtggagctcgagcccgaggttccccgccgggctc 2484121 Query: 899 ccagtgc 905 ||||||| Sbjct: 2484122 ccagtgc 2484128 Score = 155 bits (78), Expect = 8e-34 Identities = 112/122 (91%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 1029 ggcagaaggtatttttcgtataaatgcggagaatagccaggaagagtt-gtgcgagatca 1087 ||||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||||| Sbjct: 2486306 ggcagaaggtatttttcgtataaatgcagagaatagccaggaggagtttgtgagagatca 2486365 Query: 1088 cttaaatagtggatctgtgccggatggcattgatgttcactgtttggcgggtctaatcaa 1147 |||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||| Sbjct: 2486366 gttaaatagtggaattgtgccggatggcattgatattcactgtttgtcaggtctaatcaa 2486425 Query: 1148 ag 1149 || Sbjct: 2486426 ag 2486427 Score = 145 bits (73), Expect = 8e-31 Identities = 127/145 (87%) Strand = Plus / Plus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 |||||| |||| || ||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 2487202 cagatgtcagatccattgaccgcactgatgtatgcggtgcaagtgatgaattttctcaag 2487261 Query: 1437 atgctaatacagaagaccctcaaggatagagaggagtccaacctggaagaagcctctttg 1496 ||||||||||||||||||||||||| |||| | |||||||| ||||| || | ||| || Sbjct: 2487262 atgctaatacagaagaccctcaagggtagacaagagtccaatctggaggacacatctctg 2487321 Query: 1497 ccacagaaggacccatctgacgaaa 1521 || || |||||||||||||| |||| Sbjct: 2487322 ccccataaggacccatctgatgaaa 2487346 Score = 87.7 bits (44), Expect = 2e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctggtccttcttggcgctgcttctcgagctgctaaggaagtc 731 |||||||||||||||| | ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 2483901 ggaggaggaggaggagaggtggtcgttcttggcgctgctgcttgagctgctgcggaagtc 2483960 Query: 732 gctgctccggtg 743 |||||||||||| Sbjct: 2483961 gctgctccggtg 2483972 Score = 71.9 bits (36), Expect = 9e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 1805 ccgaagcatgaatagcaggaggactagaaagggcaagcggcagtgcggaacgcccaccgc 1864 ||||||| ||||||| |||||||| ||||||||||| |||||| |||||| || | Sbjct: 2487642 ccgaagcctgaatagtaggaggacaagaaagggcaaagggcagtctggaacgagtgccac 2487701 Query: 1865 tcctccagctgagaaatcgaggggcgcgagcatcgtgagccggataaactccaaggtcga 1924 | | ||||||||||||| | ||| ||||||| || |||||||||||||||||| | || Sbjct: 2487702 ttcctcagctgagaaatcaaaaggcacgagcattgtaagccggataaactccaagattga 2487761 Query: 1925 acggatcgaagcgtggaggt 1944 ||| || ||||| ||||||| Sbjct: 2487762 acgaattgaagcatggaggt 2487781 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 495 gacggaggtggcgctgttccggggcccgaccaacctcgcttcgcccgcaagc 546 ||||||||||||||| |||| |||||||||||||||||||| ||| ||||| Sbjct: 2483748 gacggaggtggcgctcctccgtggcccgaccaacctcgcttcccccacaagc 2483799
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 315 bits (159), Expect = 4e-82 Identities = 210/227 (92%) Strand = Plus / Minus Query: 1149 gcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatg 1208 ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 77631 gcctggtttagggaactcccgagtggggtgctggactcaatcccacctgaacaggtgatg 77572 Query: 1209 cagtgccaatctgaagaggactgtgctcgggttgccaaatgccttccaccaactgaatca 1268 || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 77571 caatgccagtctgaagaggactgtgctcgtgttgccaaatgccttccaccaactgaagca 77512 Query: 1269 gccttacttgactgggctgttaatttgatggctgatgttgtccaagaagaacagataaac 1328 |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 77511 gccttactagactgggctgttaatttgatggctgatgttgtccaagaagagcaaataaac 77452 Query: 1329 aagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgac 1375 ||||||| | |||||| |||| |||||||| |||||||||||||| Sbjct: 77451 aagatgaatgcgcgcaatattgccatggtttttgcaccaaatatgac 77405 Score = 184 bits (93), Expect = 9e-43 Identities = 117/125 (93%) Strand = Plus / Minus Query: 906 cagtgctagtgtctttggcgtttcaacacaatcaatgcagtgttcatatgattccagagg 965 |||||| ||||||||||| ||||||||| |||| |||||||| || |||||||||||||| Sbjct: 78330 cagtgcaagtgtctttggagtttcaacagaatcgatgcagtgctcctatgattccagagg 78271 Query: 966 aaacagtgttccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtct 1025 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78270 aaacagtgtcccaacaattctcttgatgatgcaaagacgtctttatgaacaaggcggtct 78211 Query: 1026 tcggg 1030 ||||| Sbjct: 78210 tcggg 78206 Score = 176 bits (89), Expect = 2e-40 Identities = 116/125 (92%) Strand = Plus / Minus Query: 781 gggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgacagg 840 ||||||||||| ||| ||| ||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 80641 gggatggagatagggtggccgacggacgtgcagcacgtggcgcacgtcaccttcgatagg 80582 Query: 841 ttccatggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctccc 900 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 80581 ttccatggattcctcgggctccccgtggagttcgagcccgaggtgccccgccgcgctccc 80522 Query: 901 agtgc 905 ||||| Sbjct: 80521 agtgc 80517 Score = 139 bits (70), Expect = 5e-29 Identities = 199/242 (82%) Strand = Plus / Minus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 ||||||||||| || ||||||||| | |||||||| || |||||||||||||| || ||| Sbjct: 77324 cagatggcagatcccttgactgcattgatgtatgcagtacaagtgatgaattttcttaag 77265 Query: 1437 atgctaatacagaagaccctcaaggatagagaggagtccaacctggaagaagcctctttg 1496 ||||||||||| || ||||||||||||||||| ||||| | ||||| || ||| | Sbjct: 77264 atgctaatacaaaaaaccctcaaggatagagaagagtctgatctggatgatttgtctctt 77205 Query: 1497 ccacagaaggacccatctgacgaaaacggccatcagaaccccagtctccccgttaatcct 1556 || ||||||||||| ||||| ||||| || || |||| | || | ||| | || || || Sbjct: 77204 cctcagaaggacccgtctgatgaaaatggacaccagaccaccggcctctcgcttgattct 77145 Query: 1557 caacctgaagaaatatccaggcgcccctctttcgtcagcgaggagccccttgtgtacagt 1616 || ||||| ||| ||||||||| ||||||||||||||||||||||||||| || ||||| Sbjct: 77144 caccctgacgaaggatccaggcgtccctctttcgtcagcgaggagccccttctgaacagt 77085 Query: 1617 cc 1618 || Sbjct: 77084 cc 77083 Score = 105 bits (53), Expect = 7e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 485 gaaaagcaatgacggaggtggcgctgttccggggcccgaccaacctcgcttcgcccgcaa 544 ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 80961 gaaaagcaatggcggaggtggcgctcttccggggcccgaccaacctcgcttcacccgcaa 80902 Query: 545 gccgc 549 ||||| Sbjct: 80901 gccgc 80897 Score = 101 bits (51), Expect = 1e-17 Identities = 132/159 (83%) Strand = Plus / Minus Query: 1782 aacttacttccaagcagagggaaccgaagcatgaatagcaggaggactagaaagggcaag 1841 |||||||||| | ||| ||||| ||| ||| ||||||| ||||||||||||||||||||| Sbjct: 76910 aacttacttcaaggcaaagggagccgtagcctgaatagtaggaggactagaaagggcaag 76851 Query: 1842 cggcagtgcggaacgcccaccgctcctccagctgagaaatcgaggggcgcgagcatcgtg 1901 ||||| ||||| | | ||||| || |||||||||| | || |||||||| ||| Sbjct: 76850 gtgcagtttggaacacgtgctgctccagcatctgagaaatcaaaaggtgcgagcattgtg 76791 Query: 1902 agccggataaactccaaggtcgaacggatcgaagcgtgg 1940 ||| |||||||||| ||||| |||||||||||||||||| Sbjct: 76790 agcaggataaactcaaaggttgaacggatcgaagcgtgg 76752 Score = 101 bits (51), Expect = 1e-17 Identities = 108/123 (87%), Gaps = 3/123 (2%) Strand = Plus / Minus Query: 1029 ggcagaaggtatttttcgtataaatgcggagaatagccaggaagag-ttgtgcgagatca 1087 |||||||||||||||||| |||||||| ||||||||||| |||||| ||||| |||| || Sbjct: 78117 ggcagaaggtatttttcgcataaatgcagagaatagccaagaagagcttgtgagagacca 78058 Query: 1088 cttaaatagt-ggatctgtgccggatggcattgatgttcactgtttggcgggtctaatca 1146 |||||| || ||||| ||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 78057 attaaatggtgggatc-gtgccagagggtattgatgtccactgtttggcaggtctaatca 77999 Query: 1147 aag 1149 ||| Sbjct: 77998 aag 77996 Score = 101 bits (51), Expect = 1e-17 Identities = 84/95 (88%) Strand = Plus / Minus Query: 669 atcggaggaggaggaggagcgctggtccttcttggcgctgcttctcgagctgctaaggaa 728 ||||||||||||||||||| ||||| |||||||||||||| |||| |||||| |||| Sbjct: 80744 atcggaggaggaggaggaggagtggtcgttcttggcgctgctgctcgcgctgctgcggaa 80685 Query: 729 gtcgctgctccggtgtagggcggaggacggcggcg 763 |||||||||| |||| || |||||||||||||||| Sbjct: 80684 gtcgctgctcgggtgcagcgcggaggacggcggcg 80650 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 accctcccttcaatccaactcca 32 ||||||||||||||||||||||| Sbjct: 81398 accctcccttcaatccaactcca 81376 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1967 ttgttgttgtgtaatagatgactgacccagtgtt 2000 ||||||||||| | ||||||||||||||| |||| Sbjct: 76726 ttgttgttgtgaagtagatgactgacccaatgtt 76693 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 307 cgccaccaagaactccactaccagga 332 |||||||||||||||||| ||||||| Sbjct: 81112 cgccaccaagaactccaccaccagga 81087
>emb|CT828039.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN066G12, full insert sequence Length = 577 Score = 135 bits (68), Expect = 8e-28 Identities = 139/162 (85%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctggtccttcttggcgctgcttctcgagctgctaaggaagtc 731 |||||||||||||||| | ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 412 ggaggaggaggaggagaggtggtcgttcttggcgctgctgcttgagctgctgcggaagtc 471 Query: 732 gctgctccggtgtagggcgg---aggacggcggcgaaggccacggccagggcgggatgga 788 |||||||||||| || ||| |||| ||||||| ||| |||| || |||||||||| Sbjct: 472 gctgctccggtgcagtacggtgcaggagggcggcggcggcggcggcgagtgcgggatgga 531 Query: 789 gattgggctgcccacggatgtgcagcacgtggcgcacgtcac 830 ||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 532 gattgggtggccgacggatgtgcagcacgtggcgcacgtcac 573 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 495 gacggaggtggcgctgttccggggcccgaccaacctcgcttcgcccgcaagc 546 ||||||||||||||| |||| |||||||||||||||||||| ||| ||||| Sbjct: 262 gacggaggtggcgctcctccgtggcccgaccaacctcgcttcccccacaagc 313
>gb|AY022937.1| Oryza sativa microsatellite MRG5262 containing (CTC)X9, closest to marker R3351, genomic sequence Length = 227 Score = 105 bits (53), Expect = 7e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 485 gaaaagcaatgacggaggtggcgctgttccggggcccgaccaacctcgcttcgcccgcaa 544 ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 37 gaaaagcaatggcggaggtggcgctcttccggggcccgaccaacctcgcttcacccgcaa 96 Query: 545 gccgc 549 ||||| Sbjct: 97 gccgc 101
>ref|NM_001073455.1| Oryza sativa (japonica cultivar-group) Os12g0533400 (Os12g0533400) mRNA, complete cds Length = 1328 Score = 95.6 bits (48), Expect = 7e-16 Identities = 117/140 (83%) Strand = Plus / Plus Query: 784 atggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgacaggttc 843 |||||||| ||| ||| ||||| |||| ||||||||||||||||| |||||| | ||| Sbjct: 1 atggagatcgggtggccgacggacgtgcgccacgtggcgcacgtcaccttcgaccgcttc 60 Query: 844 catggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctcccagt 903 ||||| |||||||| || ||||||||||||||| |||| |||| |||||| ||||| Sbjct: 61 catggcttcctcggcctccccgtcgagttcgaggtcgagatgccatgccgcgtccccagc 120 Query: 904 gccagtgctagtgtctttgg 923 || ||||||||||| ||||| Sbjct: 121 gctagtgctagtgtttttgg 140 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1115 cattgatgttcactgtttggc 1135 ||||||||||||||||||||| Sbjct: 333 cattgatgttcactgtttggc 353
>gb|AY364310.1| Oryza sativa (japonica cultivar-group) Rho GTPase activating protein 1 mRNA, partial cds Length = 1350 Score = 95.6 bits (48), Expect = 7e-16 Identities = 117/140 (83%) Strand = Plus / Plus Query: 784 atggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgacaggttc 843 |||||||| ||| ||| ||||| |||| ||||||||||||||||| |||||| | ||| Sbjct: 1 atggagatcgggtggccgacggacgtgcgccacgtggcgcacgtcaccttcgaccgcttc 60 Query: 844 catggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctcccagt 903 ||||| |||||||| || ||||||||||||||| |||| |||| |||||| ||||| Sbjct: 61 catggcttcctcggcctccccgtcgagttcgaggtcgagatgccatgccgcgtccccagc 120 Query: 904 gccagtgctagtgtctttgg 923 || ||||||||||| ||||| Sbjct: 121 gctagtgctagtgtttttgg 140 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1115 cattgatgttcactgtttggc 1135 ||||||||||||||||||||| Sbjct: 333 cattgatgttcactgtttggc 353
>gb|BT026360.1| Arabidopsis thaliana At5g22400 mRNA, complete cds Length = 1401 Score = 87.7 bits (44), Expect = 2e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 1350 gctatggttttcgcaccaaatatgacccagatggcagaccctttgactgcactcatgtat 1409 |||||||||||||||||||||||||| ||||||| || || |||| ||||| |||||| Sbjct: 910 gctatggttttcgcaccaaatatgacacagatggatgatccactgacagcactgatgtat 969 Query: 1410 gcggtgcaagtgatgaatttcctcaaga 1437 ||||| ||||||||||| || ||||||| Sbjct: 970 gcggttcaagtgatgaactttctcaaga 997 Score = 67.9 bits (34), Expect = 1e-07 Identities = 91/110 (82%) Strand = Plus / Plus Query: 1119 gatgttcactgtttggcgggtctaatcaaagcctggtttagggaactgccgagtggggtg 1178 ||||||||||||||||| || || ||||| || |||||||| |||||||||| | || Sbjct: 679 gatgttcactgtttggcagggcttatcaaggcatggtttagagaactgccgacaagcgtt 738 Query: 1179 ctggattctatcccacctgaacaggtgatgcagtgccaatctgaagagga 1228 || ||||| | | |||||||||||||||||||||||| | |||||||| Sbjct: 739 cttgattcgttgtcgcctgaacaggtgatgcagtgccaaacagaagagga 788
>dbj|AK229223.1| Arabidopsis thaliana mRNA for rac GTPase activating protein, complete cds, clone: RAFL16-51-C08 Length = 1656 Score = 87.7 bits (44), Expect = 2e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 1350 gctatggttttcgcaccaaatatgacccagatggcagaccctttgactgcactcatgtat 1409 |||||||||||||||||||||||||| ||||||| || || |||| ||||| |||||| Sbjct: 963 gctatggttttcgcaccaaatatgacacagatggatgatccactgacagcactgatgtat 1022 Query: 1410 gcggtgcaagtgatgaatttcctcaaga 1437 ||||| ||||||||||| || ||||||| Sbjct: 1023 gcggttcaagtgatgaactttctcaaga 1050 Score = 67.9 bits (34), Expect = 1e-07 Identities = 91/110 (82%) Strand = Plus / Plus Query: 1119 gatgttcactgtttggcgggtctaatcaaagcctggtttagggaactgccgagtggggtg 1178 ||||||||||||||||| || || ||||| || |||||||| |||||||||| | || Sbjct: 732 gatgttcactgtttggcagggcttatcaaggcatggtttagagaactgccgacaagcgtt 791 Query: 1179 ctggattctatcccacctgaacaggtgatgcagtgccaatctgaagagga 1228 || ||||| | | |||||||||||||||||||||||| | |||||||| Sbjct: 792 cttgattcgttgtcgcctgaacaggtgatgcagtgccaaacagaagagga 841
>ref|NM_122145.3| Arabidopsis thaliana Rac GTPase activator (AT5G22400) mRNA, complete cds Length = 1865 Score = 87.7 bits (44), Expect = 2e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 1350 gctatggttttcgcaccaaatatgacccagatggcagaccctttgactgcactcatgtat 1409 |||||||||||||||||||||||||| ||||||| || || |||| ||||| |||||| Sbjct: 1040 gctatggttttcgcaccaaatatgacacagatggatgatccactgacagcactgatgtat 1099 Query: 1410 gcggtgcaagtgatgaatttcctcaaga 1437 ||||| ||||||||||| || ||||||| Sbjct: 1100 gcggttcaagtgatgaactttctcaaga 1127 Score = 67.9 bits (34), Expect = 1e-07 Identities = 91/110 (82%) Strand = Plus / Plus Query: 1119 gatgttcactgtttggcgggtctaatcaaagcctggtttagggaactgccgagtggggtg 1178 ||||||||||||||||| || || ||||| || |||||||| |||||||||| | || Sbjct: 809 gatgttcactgtttggcagggcttatcaaggcatggtttagagaactgccgacaagcgtt 868 Query: 1179 ctggattctatcccacctgaacaggtgatgcagtgccaatctgaagagga 1228 || ||||| | | |||||||||||||||||||||||| | |||||||| Sbjct: 869 cttgattcgttgtcgcctgaacaggtgatgcagtgccaaacagaagagga 918
>emb|BX832015.1|CNS0A147 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZE11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1674 Score = 87.7 bits (44), Expect = 2e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 1350 gctatggttttcgcaccaaatatgacccagatggcagaccctttgactgcactcatgtat 1409 |||||||||||||||||||||||||| ||||||| || || |||| ||||| |||||| Sbjct: 1035 gctatggttttcgcaccaaatatgacacagatggatgatccactgacagcactgatgtat 1094 Query: 1410 gcggtgcaagtgatgaatttcctcaaga 1437 ||||| ||||||||||| || ||||||| Sbjct: 1095 gcggttcaagtgatgaactttctcaaga 1122 Score = 67.9 bits (34), Expect = 1e-07 Identities = 91/110 (82%) Strand = Plus / Plus Query: 1119 gatgttcactgtttggcgggtctaatcaaagcctggtttagggaactgccgagtggggtg 1178 ||||||||||||||||| || || ||||| || |||||||| |||||||||| | || Sbjct: 804 gatgttcactgtttggcagggcttatcaaggcatggtttagagaactgccgacaagcgtt 863 Query: 1179 ctggattctatcccacctgaacaggtgatgcagtgccaatctgaagagga 1228 || ||||| | | |||||||||||||||||||||||| | |||||||| Sbjct: 864 cttgattcgttgtcgcctgaacaggtgatgcagtgccaaacagaagagga 913
>emb|BX832004.1|CNS09YVN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1840 Score = 87.7 bits (44), Expect = 2e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 1350 gctatggttttcgcaccaaatatgacccagatggcagaccctttgactgcactcatgtat 1409 |||||||||||||||||||||||||| ||||||| || || |||| ||||| |||||| Sbjct: 1041 gctatggttttcgcaccaaatatgacacagatggatgatccactgacagcactgatgtat 1100 Query: 1410 gcggtgcaagtgatgaatttcctcaaga 1437 ||||| ||||||||||| || ||||||| Sbjct: 1101 gcggttcaagtgatgaactttctcaaga 1128 Score = 67.9 bits (34), Expect = 1e-07 Identities = 91/110 (82%) Strand = Plus / Plus Query: 1119 gatgttcactgtttggcgggtctaatcaaagcctggtttagggaactgccgagtggggtg 1178 ||||||||||||||||| || || ||||| || |||||||| |||||||||| | || Sbjct: 810 gatgttcactgtttggcagggcttatcaaggcatggtttagagaactgccgacaagcgtt 869 Query: 1179 ctggattctatcccacctgaacaggtgatgcagtgccaatctgaagagga 1228 || ||||| | | |||||||||||||||||||||||| | |||||||| Sbjct: 870 cttgattcgttgtcgcctgaacaggtgatgcagtgccaaacagaagagga 919
>ref|NM_180127.1| Arabidopsis thaliana Rac GTPase activator (AT2G46710) mRNA, complete cds Length = 1731 Score = 83.8 bits (42), Expect = 2e-12 Identities = 84/98 (85%) Strand = Plus / Plus Query: 1340 tcgcaatgttgctatggttttcgcaccaaatatgacccagatggcagaccctttgactgc 1399 ||||||||| |||||||| || || ||||||||||| || |||||||| ||||| ||||| Sbjct: 1034 tcgcaatgtagctatggtctttgctccaaatatgactcaaatggcagatcctttaactgc 1093 Query: 1400 actcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 |||||| | || |||||||||||||| || ||||||| Sbjct: 1094 actcatccacgcagtgcaagtgatgaactttctcaaga 1131
>gb|BT005369.1| Arabidopsis thaliana At2g46710 mRNA, complete cds Length = 1368 Score = 83.8 bits (42), Expect = 2e-12 Identities = 84/98 (85%) Strand = Plus / Plus Query: 1340 tcgcaatgttgctatggttttcgcaccaaatatgacccagatggcagaccctttgactgc 1399 ||||||||| |||||||| || || ||||||||||| || |||||||| ||||| ||||| Sbjct: 864 tcgcaatgtagctatggtctttgctccaaatatgactcaaatggcagatcctttaactgc 923 Query: 1400 actcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 |||||| | || |||||||||||||| || ||||||| Sbjct: 924 actcatccacgcagtgcaagtgatgaactttctcaaga 961
>dbj|AK117311.1| Arabidopsis thaliana At2g46710 mRNA for putative rac GTPase activating protein, complete cds, clone: RAFL16-87-M24 Length = 1541 Score = 83.8 bits (42), Expect = 2e-12 Identities = 84/98 (85%) Strand = Plus / Plus Query: 1340 tcgcaatgttgctatggttttcgcaccaaatatgacccagatggcagaccctttgactgc 1399 ||||||||| |||||||| || || ||||||||||| || |||||||| ||||| ||||| Sbjct: 932 tcgcaatgtagctatggtctttgctccaaatatgactcaaatggcagatcctttaactgc 991 Query: 1400 actcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 |||||| | || |||||||||||||| || ||||||| Sbjct: 992 actcatccacgcagtgcaagtgatgaactttctcaaga 1029
>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137571 Score = 83.8 bits (42), Expect = 2e-12 Identities = 81/94 (86%) Strand = Plus / Minus Query: 783 gatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgacaggtt 842 ||||||||| ||| ||| ||||| |||| ||||||||||||||||| |||||| | || Sbjct: 47124 gatggagatcgggtggccgacggacgtgcgccacgtggcgcacgtcaccttcgaccgctt 47065 Query: 843 ccatggattcctcgggcttcccgtcgagttcgag 876 |||||| |||||||| || ||||||||||||||| Sbjct: 47064 ccatggcttcctcggcctccccgtcgagttcgag 47031 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1115 cattgatgttcactgtttggc 1135 ||||||||||||||||||||| Sbjct: 45386 cattgatgttcactgtttggc 45366
>gb|AF064788.1|AF064788 Lotus japonicus rac GTPase activating protein 2 mRNA, partial cds Length = 1555 Score = 81.8 bits (41), Expect = 1e-11 Identities = 134/165 (81%) Strand = Plus / Plus Query: 1273 tacttgactgggctgttaatttgatggctgatgttgtccaagaagaacagataaacaaga 1332 ||||||||||||| | ||||||||||| |||||||| | | |||||| | ||||| | Sbjct: 639 tacttgactgggcaatcaatttgatggcagatgttgttgagcatgaacagttcaacaaaa 698 Query: 1333 tgagcgatcgcaatgttgctatggttttcgcaccaaatatgacccagatggcagaccctt 1392 ||| | |||||| |||||||||||||||| || || ||||| ||||||| ||||||| Sbjct: 699 tgaatgcacgcaatattgctatggttttcgcccccaacatgacacagatggtcgaccctt 758 Query: 1393 tgactgcactcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 |||||||| | || | ||||||||||| ||||| ||||| |||| Sbjct: 759 tgactgcattgattcacgcggtgcaagtcatgaacttccttaaga 803 Score = 44.1 bits (22), Expect = 2.1 Identities = 67/82 (81%) Strand = Plus / Plus Query: 919 tttggcgtttcaacacaatcaatgcagtgttcatatgattccagaggaaacagtgttcca 978 ||||| |||||| || | ||||||||||| || |||||| || || |||||||| ||| Sbjct: 284 tttggagtttcagcaaagtcaatgcagtgctcttatgatgaaagggggaacagtgtccca 343 Query: 979 acgattctcttgatgatgcaaa 1000 || ||||| |||||||||||| Sbjct: 344 accattctgctgatgatgcaaa 365
>gb|AY364311.1| Oryza sativa (japonica cultivar-group) Rho GTPase activating protein 2 mRNA, complete cds Length = 1552 Score = 79.8 bits (40), Expect = 4e-11 Identities = 160/200 (80%) Strand = Plus / Plus Query: 781 gggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgacagg 840 |||||| ||||||| | |||||| || |||| |||||| |||||||||| |||||| | Sbjct: 199 gggatgcagattggccggcccaccgacgtgcggcacgtctcgcacgtcaccttcgaccgc 258 Query: 841 ttccatggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctccc 900 ||| || |||||||| || |||| ||| |||||||||| |||||||||| ||| || Sbjct: 259 ttcgtggggttcctcggcctccccgccgacctcgagcccgacgtgccccgccccgcgcct 318 Query: 901 agtgccagtgctagtgtctttggcgtttcaacacaatcaatgcagtgttcatatgattcc 960 || ||||||| ||||| ||||| |||||| || || ||||| || ||||| ||| | Sbjct: 319 agcgccagtgtgagtgtatttggagtttcaccaacgtccatgcaatgctcatacgataac 378 Query: 961 agaggaaacagtgttccaac 980 |||||||||||||| ||||| Sbjct: 379 agaggaaacagtgtgccaac 398 Score = 73.8 bits (37), Expect = 2e-09 Identities = 91/109 (83%) Strand = Plus / Plus Query: 1329 aagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgacccagatggcagac 1388 ||||||| || |||||| ||||||||||||| |||||||| ||||| |||||||| || Sbjct: 748 aagatgaacgctcgcaacattgctatggtttttgcaccaaacatgactcagatggccgat 807 Query: 1389 cctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 || |||||||| | || |||| || |||||||||||||| ||||||| Sbjct: 808 cccttgactgctttgatacatgcagttcaagtgatgaattttctcaaga 856
>ref|NM_001054272.1| Oryza sativa (japonica cultivar-group) Os02g0679500 (Os02g0679500) mRNA, partial cds Length = 1695 Score = 73.8 bits (37), Expect = 2e-09 Identities = 91/109 (83%) Strand = Plus / Plus Query: 1329 aagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgacccagatggcagac 1388 ||||||| || |||||| ||||||||||||| |||||||| ||||| |||||||| || Sbjct: 863 aagatgaacgctcgcaacattgctatggtttttgcaccaaacatgactcagatggccgat 922 Query: 1389 cctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 || |||||||| | || |||| || |||||||||||||| ||||||| Sbjct: 923 cccttgactgctttgatacatgcagttcaagtgatgaattttctcaaga 971 Score = 65.9 bits (33), Expect = 6e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 808 gtgcagcacgtggcgcacgtcacgttcgacaggttccatggattcctcgggcttcccgtc 867 |||| |||||| |||||||||| |||||| | ||| || |||||||| || |||| | Sbjct: 341 gtgcggcacgtctcgcacgtcaccttcgaccgcttcgtggggttcctcggcctccccgcc 400 Query: 868 gagttcgagcccgaggtgccccgccgcgctcccagtgccagtgctagtgtctttggcgtt 927 || |||||||||| |||||||||| ||| || || ||||||| ||||| ||||| ||| Sbjct: 401 gacctcgagcccgacgtgccccgccccgcgcctagcgccagtgtgagtgtatttggagtt 460 Query: 928 tcaacacaatcaatgcagtgttcatatgattccagaggaaacagtgttccaac 980 ||| || || ||||| || ||||| ||| ||||||||||||||| ||||| Sbjct: 461 tcaccaacgtccatgcaatgctcatacgataacagaggaaacagtgtgccaac 513
>gb|DQ813657.1| Nicotiana tabacum RhoGAP1 mRNA, complete cds Length = 1650 Score = 73.8 bits (37), Expect = 2e-09 Identities = 124/153 (81%) Strand = Plus / Plus Query: 1278 gactgggctgttaatttgatggctgatgttgtccaagaagaacagataaacaagatgagc 1337 ||||||||| | ||| | ||||||||||||||||| |||||||| | |||||||||| Sbjct: 813 gactgggctatcaatctcatggctgatgttgtccaggaagaacaccttaacaagatgaat 872 Query: 1338 gatcgcaatgttgctatggttttcgcaccaaatatgacccagatggcagaccctttgact 1397 ||||| | || ||||| || || || || ||||| ||||||||||| || |||||| Sbjct: 873 acgcgcaacatcgcaatggtgtttgctcctaacatgacacagatggcagatccgttgact 932 Query: 1398 gcactcatgtatgcggtgcaagtgatgaatttc 1430 ||||| |||||||| || ||||| ||||||||| Sbjct: 933 gcactgatgtatgctgttcaagtaatgaatttc 965 Score = 58.0 bits (29), Expect = 1e-04 Identities = 201/257 (78%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 970 agtgttccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtcttcgg 1029 ||||||||||| |||||| | | |||||||| ||| | |||| ||||| ||||| | | Sbjct: 504 agtgttccaactattctccttctaatgcaaaggcgtttgtatgctcaagggggtctacag 563 Query: 1030 gcagaaggtatttttcgtataaatgcggagaatagccaggaagag-ttgtgcgagatcac 1088 |||||||| |||||| | |||||||| || || ||| |||| ||| |||| | || || Sbjct: 564 gcagaagggatttttaggataaatgctgaaaacagcgaggaggagcttgttagggagcaa 623 Query: 1089 ttaaatagtggatctgtgccggatggcattgatgttcactgtttggcgggtctaatcaaa 1148 ||||| || ||| || |||||||| |||||||| || |||||||| || || || || Sbjct: 624 ttaaacaggggaatagttccggatgggattgatgtacattgtttggcaggcctcattaag 683 Query: 1149 gcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatg 1208 || ||||| ||||| ||||| ||||||||| ||||| | | | || || ||||| ||| Sbjct: 684 gcgtggttcagggagctgccaagtggggtgttggatacactttctcccgagcaggtcatg 743 Query: 1209 cagtgccaatctgaaga 1225 ||||||||||| ||||| Sbjct: 744 cagtgccaatcagaaga 760
>dbj|AK228173.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-62-P09 Length = 1455 Score = 73.8 bits (37), Expect = 2e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 ||||||||||||||||| |||||| | ||||||||||| ||||||||||| || |||||| Sbjct: 835 cagatggcagaccctttaactgcattgatgtatgcggtccaagtgatgaagttgctcaag 894 Query: 1437 a 1437 | Sbjct: 895 a 895
>ref|NM_100707.2| Arabidopsis thaliana Rac GTPase activator (AT1G08340) mRNA, complete cds Length = 1236 Score = 73.8 bits (37), Expect = 2e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 ||||||||||||||||| |||||| | ||||||||||| ||||||||||| || |||||| Sbjct: 835 cagatggcagaccctttaactgcattgatgtatgcggtccaagtgatgaagttgctcaag 894 Query: 1437 a 1437 | Sbjct: 895 a 895
>gb|BT014961.1| Arabidopsis thaliana At1g08340 gene, complete cds Length = 996 Score = 73.8 bits (37), Expect = 2e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 ||||||||||||||||| |||||| | ||||||||||| ||||||||||| || |||||| Sbjct: 595 cagatggcagaccctttaactgcattgatgtatgcggtccaagtgatgaagttgctcaag 654 Query: 1437 a 1437 | Sbjct: 655 a 655
>gb|BT012608.1| Arabidopsis thaliana At1g08340 gene, complete cds Length = 1329 Score = 73.8 bits (37), Expect = 2e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 ||||||||||||||||| |||||| | ||||||||||| ||||||||||| || |||||| Sbjct: 781 cagatggcagaccctttaactgcattgatgtatgcggtccaagtgatgaagttgctcaag 840 Query: 1437 a 1437 | Sbjct: 841 a 841
>dbj|AK067772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120L23, full insert sequence Length = 1695 Score = 73.8 bits (37), Expect = 2e-09 Identities = 91/109 (83%) Strand = Plus / Plus Query: 1329 aagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgacccagatggcagac 1388 ||||||| || |||||| ||||||||||||| |||||||| ||||| |||||||| || Sbjct: 863 aagatgaacgctcgcaacattgctatggtttttgcaccaaacatgactcagatggccgat 922 Query: 1389 cctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 || |||||||| | || |||| || |||||||||||||| ||||||| Sbjct: 923 cccttgactgctttgatacatgcagttcaagtgatgaattttctcaaga 971 Score = 58.0 bits (29), Expect = 1e-04 Identities = 138/173 (79%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 808 gtgcagcacgtggcgcacgtcacgttcgacaggttccatggattcctcgggcttcccgtc 867 |||| |||||| |||||||||| |||||| | ||| || |||||||| || |||| | Sbjct: 342 gtgcggcacgtctcgcacgtcaccttcgaccgcttcgtggggttcctcggcctccccgcc 401 Query: 868 gagttcgagcccgaggtgccccgccgcgctcccagtgccagtgctagtgtctttggcgtt 927 || |||||||||| |||||||||| ||| || || ||||||| ||||| ||||| ||| Sbjct: 402 gacctcgagcccgacgtgccccgccccgcgcctagcgccagtgtgagtgtatttggagtt 461 Query: 928 tcaacacaatcaatgcagtgttcatatgattccagaggaaacagtgttccaac 980 ||| || || ||||| || ||||| ||| ||||||||||||||| ||||| Sbjct: 462 tcaccaacgtccatgca-tgctcatacgataacagaggaaacagtgtgccaac 513
>gb|AC011438.3|AC011438 Genomic sequence for Arabidopsis thaliana BAC T23G18 from chromosome I, complete sequence Length = 91470 Score = 71.9 bits (36), Expect = 9e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 1378 agatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 |||||||||||||||| |||||| | ||||||||||| ||||||||||| || ||||||| Sbjct: 90187 agatggcagaccctttaactgcattgatgtatgcggtccaagtgatgaagttgctcaaga 90246
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 71.9 bits (36), Expect = 9e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 1378 agatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 |||||||||||||||| |||||| | ||||||||||| ||||||||||| || ||||||| Sbjct: 13103 agatggcagaccctttaactgcattgatgtatgcggtccaagtgatgaagttgctcaaga 13162
>ref|NM_001065972.1| Oryza sativa (japonica cultivar-group) Os07g0408500 (Os07g0408500) mRNA, complete cds Length = 1740 Score = 67.9 bits (34), Expect = 1e-07 Identities = 115/142 (80%) Strand = Plus / Plus Query: 1296 atggctgatgttgtccaagaagaacagataaacaagatgagcgatcgcaatgttgctatg 1355 ||||||||||||||| | ||||| || ||||||||||| | || ||||| |||||| Sbjct: 808 atggctgatgttgtcgaggaagaggagtcaaacaagatgaatgcccgaaatgtcgctatg 867 Query: 1356 gttttcgcaccaaatatgacccagatggcagaccctttgactgcactcatgtatgcggtg 1415 || || ||||| |||||||| |||||| |||| ||| | ||||| || ||| |||| || Sbjct: 868 gtctttgcacccaatatgacgcagatgtcagatcctcttactgctctgatgcatgctgtt 927 Query: 1416 caagtgatgaatttcctcaaga 1437 |||||||||||| | ||||||| Sbjct: 928 caagtgatgaatcttctcaaga 949
>dbj|AK103596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133E02, full insert sequence Length = 1740 Score = 67.9 bits (34), Expect = 1e-07 Identities = 115/142 (80%) Strand = Plus / Plus Query: 1296 atggctgatgttgtccaagaagaacagataaacaagatgagcgatcgcaatgttgctatg 1355 ||||||||||||||| | ||||| || ||||||||||| | || ||||| |||||| Sbjct: 808 atggctgatgttgtcgaggaagaggagtcaaacaagatgaatgcccgaaatgtcgctatg 867 Query: 1356 gttttcgcaccaaatatgacccagatggcagaccctttgactgcactcatgtatgcggtg 1415 || || ||||| |||||||| |||||| |||| ||| | ||||| || ||| |||| || Sbjct: 868 gtctttgcacccaatatgacacagatgtcagatcctcttactgctctgatgcatgctgtt 927 Query: 1416 caagtgatgaatttcctcaaga 1437 |||||||||||| | ||||||| Sbjct: 928 caagtgatgaatcttctcaaga 949
>gb|AF064787.1|AF064787 Lotus japonicus rac GTPase activating protein 1 mRNA, complete cds Length = 2102 Score = 67.9 bits (34), Expect = 1e-07 Identities = 76/90 (84%) Strand = Plus / Plus Query: 1348 ttgctatggttttcgcaccaaatatgacccagatggcagaccctttgactgcactcatgt 1407 |||| |||||||| |||||||| ||||| || ||||| || ||||||||||| | |||| Sbjct: 1076 ttgcaatggtttttgcaccaaacatgactcatatggccgatcctttgactgctttgatgt 1135 Query: 1408 atgcggtgcaagtgatgaatttcctcaaga 1437 |||| || ||||| |||||||| ||||||| Sbjct: 1136 atgcagtacaagtcatgaattttctcaaga 1165
>emb|CT987681.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 973 Score = 65.9 bits (33), Expect = 6e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 1348 ttgctatggttttcgcaccaaatatgacccagatggcagaccctttgactgcactcatgt 1407 |||| |||||||| || ||||||||||| ||||||||||| || |||||||| | |||| Sbjct: 458 ttgccatggtttttgccccaaatatgactcagatggcagatcccttgactgcgttaatgt 517 Query: 1408 atgcggtgcaagtgatgaatttcct 1432 |||| || ||||| ||||| ||||| Sbjct: 518 atgcagttcaagtaatgaacttcct 542
>emb|CT986046.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 901 Score = 65.9 bits (33), Expect = 6e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 1348 ttgctatggttttcgcaccaaatatgacccagatggcagaccctttgactgcactcatgt 1407 |||| |||||||| || ||||||||||| ||||||||||| || |||||||| | |||| Sbjct: 322 ttgccatggtttttgccccaaatatgactcagatggcagatcccttgactgcgttaatgt 381 Query: 1408 atgcggtgcaagtgatgaatttcct 1432 |||| || ||||| ||||| ||||| Sbjct: 382 atgcagttcaagtaatgaacttcct 406
>gb|AC150442.2| Medicago truncatula chromosome 7 BAC clone mth2-2o12, complete sequence Length = 89504 Score = 65.9 bits (33), Expect = 6e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 ||||||| ||| ||||||||||| || |||||||| || ||||| ||||||||||||||| Sbjct: 14587 cagatggtagatcctttgactgctctgatgtatgctgtacaagtcatgaatttcctcaag 14528 Query: 1437 a 1437 | Sbjct: 14527 a 14527
>gb|AC139854.21| Medicago truncatula clone mth2-16e16, complete sequence Length = 117864 Score = 65.9 bits (33), Expect = 6e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 ||||||| ||| ||||||||||| || |||||||| || ||||| ||||||||||||||| Sbjct: 114826 cagatggtagatcctttgactgctctgatgtatgctgtacaagtcatgaatttcctcaag 114767 Query: 1437 a 1437 | Sbjct: 114766 a 114766
>gb|AY110038.1| Zea mays CL10175_1 mRNA sequence Length = 961 Score = 60.0 bits (30), Expect = 4e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 1368 aatatgacccagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaat 1427 ||||||||| ||||||| ||||| |||||||| | || |||| || |||||||||||| Sbjct: 737 aatatgaccaagatggcggaccccttgactgctttgatacatgccgttcaagtgatgaat 678 Query: 1428 ttcctcaaga 1437 |||||||||| Sbjct: 677 ttcctcaaga 668
>gb|AF064789.1|AF064789 Lotus japonicus rac GTPase activating protein 3 mRNA, partial cds Length = 1663 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 897 tcccagtgccagtgctagtgtctttggcgtttcaacacaatcaatgcagtgttcatatga 956 ||||||||| |||| |||||| |||||||| ||| | |||||||||| ||||| ||||| Sbjct: 232 tcccagtgctagtgttagtgtgtttggcgtctcagctgaatcaatgcattgttcttatga 291 Query: 957 ttccagaggaaacagtgt 974 ||| | ||||||||||| Sbjct: 292 ttcaaagggaaacagtgt 309 Score = 52.0 bits (26), Expect = 0.009 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1257 ccaactgaatcagccttacttgactgggctgttaatttgatggctgatgttgtccaagaa 1316 |||||||| | |||||||||| |||||||| || || | |||||||||||||| ||||| Sbjct: 593 ccaactgagttagccttacttaactgggctcttgatctcatggctgatgttgtggaagaa 652 Query: 1317 ga 1318 || Sbjct: 653 ga 654
>ref|NM_128304.1| Arabidopsis thaliana Rac GTPase activator (AT2G27440) mRNA, complete cds Length = 1107 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1362 gcaccaaatatgacccagatggcagaccctttgactgcactcatgtatgcggtgcaagtg 1421 ||||| || ||| ||||||||||||| ||||| || ||| | |||||||| ||||||||| Sbjct: 766 gcacccaacatgtcccagatggcagatcctttaacagcattaatgtatgcagtgcaagtg 825 Query: 1422 atgaa 1426 ||||| Sbjct: 826 atgaa 830
>gb|AC144592.26| Medicago truncatula clone mth2-23m13, complete sequence Length = 139267 Score = 58.0 bits (29), Expect = 1e-04 Identities = 83/101 (82%) Strand = Plus / Minus Query: 1275 cttgactgggctgttaatttgatggctgatgttgtccaagaagaacagataaacaagatg 1334 ||||||||||| | |||||||||||||||||||| || | |||||| | || |||||| Sbjct: 927 cttgactgggcaatcaatttgatggctgatgttgttgaaaatgaacagttcaataagatg 868 Query: 1335 agcgatcgcaatgttgctatggttttcgcaccaaatatgac 1375 | | ||||| || ||||||||||||||||| || ||||| Sbjct: 867 aatgcgcgcaacgtagctatggttttcgcacccaacatgac 827 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Minus Query: 937 tcaatgcagtgttcatatgattccagaggaaacagtgttccaacgattct 986 |||||||||||||| |||||| ||||| |||||||||||||| ||||| Sbjct: 1501 tcaatgcagtgttcttatgatgatagagggaacagtgttccaacaattct 1452
>gb|AC005819.3| Arabidopsis thaliana chromosome 2 clone T3A4 map CIC06C03, complete sequence Length = 55870 Score = 56.0 bits (28), Expect = 6e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 1378 agatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 |||||||||| ||||| ||||||||||| | || |||||||||||||| || ||||||| Sbjct: 48753 agatggcagatcctttaactgcactcatccacgcagtgcaagtgatgaactttctcaaga 48812
>dbj|AB007651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD9 Length = 85421 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1194 cctgaacaggtgatgcagtgccaatctgaagagga 1228 |||||||||||||||||||||||| | |||||||| Sbjct: 62712 cctgaacaggtgatgcagtgccaaacagaagagga 62678 Score = 52.0 bits (26), Expect = 0.009 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1350 gctatggttttcgcaccaaatatgac 1375 |||||||||||||||||||||||||| Sbjct: 62556 gctatggttttcgcaccaaatatgac 62531 Score = 50.1 bits (25), Expect = 0.035 Identities = 40/45 (88%) Strand = Plus / Minus Query: 1393 tgactgcactcatgtatgcggtgcaagtgatgaatttcctcaaga 1437 |||| ||||| ||||||||||| ||||||||||| || ||||||| Sbjct: 62428 tgacagcactgatgtatgcggttcaagtgatgaactttctcaaga 62384
>ref|NM_001060165.1| Oryza sativa (japonica cultivar-group) Os04g0577200 (Os04g0577200) mRNA, complete cds Length = 1696 Score = 52.0 bits (26), Expect = 0.009 Identities = 104/130 (80%) Strand = Plus / Plus Query: 781 gggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgacagg 840 ||||||||||| |||| ||||||||| |||| |||||| | |||||||| |||||| | Sbjct: 331 gggatggagatcgggcggcccacggacgtgcggcacgtctcccacgtcaccttcgaccgc 390 Query: 841 ttccatggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctccc 900 ||| || |||||||| || |||| ||| |||||||||| || ||| ||| | | ||| Sbjct: 391 ttcggcggcttcctcggcctccccgccgacctcgagcccgaagttcccagccccacgccc 450 Query: 901 agtgccagtg 910 || ||||||| Sbjct: 451 agcgccagtg 460 Score = 48.1 bits (24), Expect = 0.14 Identities = 72/88 (81%) Strand = Plus / Plus Query: 1350 gctatggttttcgcaccaaatatgacccagatggcagaccctttgactgcactcatgtat 1409 |||||||| || || ||||| ||||| |||||||| || || |||||||| || || || Sbjct: 901 gctatggtctttgcgccaaacatgactcagatggccgatccattgactgccctgatacat 960 Query: 1410 gcggtgcaagtgatgaatttcctcaaga 1437 || || || || |||||||||||||||| Sbjct: 961 gcagttcaggtcatgaatttcctcaaga 988
>gb|AC006232.4| Arabidopsis thaliana chromosome 2 clone F10A12 map B68, complete sequence Length = 90341 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaa 1426 ||||||||||| ||||| || ||| | |||||||| |||||||||||||| Sbjct: 42006 cagatggcagatcctttaacagcattaatgtatgcagtgcaagtgatgaa 42055
>dbj|AK101984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033078K23, full insert sequence Length = 1698 Score = 52.0 bits (26), Expect = 0.009 Identities = 104/130 (80%) Strand = Plus / Plus Query: 781 gggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgacagg 840 ||||||||||| |||| ||||||||| |||| |||||| | |||||||| |||||| | Sbjct: 332 gggatggagatcgggcggcccacggacgtgcggcacgtctcccacgtcaccttcgaccgc 391 Query: 841 ttccatggattcctcgggcttcccgtcgagttcgagcccgaggtgccccgccgcgctccc 900 ||| || |||||||| || |||| ||| |||||||||| || ||| ||| | | ||| Sbjct: 392 ttcggcggcttcctcggcctccccgccgacctcgagcccgaagttcccagccccacgccc 451 Query: 901 agtgccagtg 910 || ||||||| Sbjct: 452 agcgccagtg 461 Score = 48.1 bits (24), Expect = 0.14 Identities = 72/88 (81%) Strand = Plus / Plus Query: 1350 gctatggttttcgcaccaaatatgacccagatggcagaccctttgactgcactcatgtat 1409 |||||||| || || ||||| ||||| |||||||| || || |||||||| || || || Sbjct: 902 gctatggtctttgcgccaaacatgactcagatggccgatccattgactgccctgatacat 961 Query: 1410 gcggtgcaagtgatgaatttcctcaaga 1437 || || || || |||||||||||||||| Sbjct: 962 gcagttcaggtcatgaatttcctcaaga 989
>emb|CR855139.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0404F02, complete sequence Length = 130181 Score = 50.1 bits (25), Expect = 0.035 Identities = 49/57 (85%) Strand = Plus / Plus Query: 781 gggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgac 837 ||||||||||| |||| ||||||||| |||| |||||| | |||||||| |||||| Sbjct: 24099 gggatggagatcgggcggcccacggacgtgcggcacgtctcccacgtcaccttcgac 24155
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 50.1 bits (25), Expect = 0.035 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 867 cgagttcgagcccgaggtgccccgccgcgctcc 899 ||||||||||||||||||| ||||||||||||| Sbjct: 429929 cgagttcgagcccgaggtg-cccgccgcgctcc 429960 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 755 acggcggcgaaggccacggcc 775 ||||||||||||||||||||| Sbjct: 397622 acggcggcgaaggccacggcc 397642
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 50.1 bits (25), Expect = 0.035 Identities = 49/57 (85%) Strand = Plus / Plus Query: 781 gggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgac 837 ||||||||||| |||| ||||||||| |||| |||||| | |||||||| |||||| Sbjct: 29079588 gggatggagatcgggcggcccacggacgtgcggcacgtctcccacgtcaccttcgac 29079644
>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04, complete sequence Length = 164567 Score = 50.1 bits (25), Expect = 0.035 Identities = 49/57 (85%) Strand = Plus / Plus Query: 781 gggatggagattgggctgcccacggatgtgcagcacgtggcgcacgtcacgttcgac 837 ||||||||||| |||| ||||||||| |||| |||||| | |||||||| |||||| Sbjct: 146242 gggatggagatcgggcggcccacggacgtgcggcacgtctcccacgtcaccttcgac 146298
>ref|XM_001190560.1| PREDICTED: Strongylocentrotus purpuratus similar to glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase (LOC580766), mRNA Length = 3225 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 764 aaggccacggccagggcgggatg 786 ||||||||||||||||||||||| Sbjct: 1576 aaggccacggccagggcgggatg 1598
>ref|XM_780804.2| PREDICTED: Strongylocentrotus purpuratus similar to glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase, transcript variant 2 (LOC580766), mRNA Length = 3225 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 764 aaggccacggccagggcgggatg 786 ||||||||||||||||||||||| Sbjct: 1576 aaggccacggccagggcgggatg 1598
>ref|XM_362295.1| Magnaporthe grisea 70-15 hypothetical protein (MG04740.4) partial mRNA Length = 510 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 700 ttggcgctgcttctcgagctgct 722 ||||||||||||||||||||||| Sbjct: 249 ttggcgctgcttctcgagctgct 227
>ref|XM_501118.1| Yarrowia lipolytica CLIB122, YALI0B19998g predicted mRNA Length = 6360 Score = 46.1 bits (23), Expect = 0.54 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1946 gaaaccccggtgccactgccgttgttg 1972 ||||| ||||||||||||||||||||| Sbjct: 4265 gaaactccggtgccactgccgttgttg 4291
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 46.1 bits (23), Expect = 0.54 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1329 aagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgac 1375 ||||||| || |||||| ||||||||||||| |||||||| ||||| Sbjct: 27764813 aagatgaacgctcgcaacattgctatggtttttgcaccaaacatgac 27764859
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 46.1 bits (23), Expect = 0.54 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1329 aagatgagcgatcgcaatgttgctatggttttcgcaccaaatatgac 1375 ||||||| || |||||| ||||||||||||| |||||||| ||||| Sbjct: 50146 aagatgaacgctcgcaacattgctatggtttttgcaccaaacatgac 50192
>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105, complete sequence Length = 127990 Score = 46.1 bits (23), Expect = 0.54 Identities = 74/91 (81%) Strand = Plus / Minus Query: 1273 tacttgactgggctgttaatttgatggctgatgttgtccaagaagaacagataaacaaga 1332 ||||||||||||| | ||||||||||| |||||||| | | |||||| | ||||| | Sbjct: 100446 tacttgactgggcaatcaatttgatggcagatgttgttgagcatgaacagttcaacaaaa 100387 Query: 1333 tgagcgatcgcaatgttgctatggttttcgc 1363 ||| | |||||| |||||||||||||||| Sbjct: 100386 tgaatgcacgcaatattgctatggttttcgc 100356 Score = 44.1 bits (22), Expect = 2.1 Identities = 67/82 (81%) Strand = Plus / Minus Query: 919 tttggcgtttcaacacaatcaatgcagtgttcatatgattccagaggaaacagtgttcca 978 ||||| |||||| || | ||||||||||| || |||||| || || |||||||| ||| Sbjct: 101565 tttggagtttcagcaaagtcaatgcagtgctcttatgatgaaagggggaacagtgtccca 101506 Query: 979 acgattctcttgatgatgcaaa 1000 || ||||| |||||||||||| Sbjct: 101505 accattctgctgatgatgcaaa 101484 Score = 42.1 bits (21), Expect = 8.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 ||||||| ||||||||||||||| | || | ||||||||||| ||||| ||||| ||| Sbjct: 99839 cagatggtcgaccctttgactgcattgattcacgcggtgcaagtcatgaacttccttaag 99780 Query: 1437 a 1437 | Sbjct: 99779 a 99779
>ref|XM_319788.2| Anopheles gambiae str. PEST ENSANGP00000005188 (ENSANGG00000004000), partial mRNA Length = 2847 Score = 46.1 bits (23), Expect = 0.54 Identities = 26/27 (96%) Strand = Plus / Minus Query: 659 aggtggaaggatcggaggaggaggagg 685 ||||||||||||||||||| ||||||| Sbjct: 2194 aggtggaaggatcggaggacgaggagg 2168
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.54 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1946 gaaaccccggtgccactgccgttgttg 1972 ||||| ||||||||||||||||||||| Sbjct: 2628382 gaaactccggtgccactgccgttgttg 2628356
>emb|AL929265.6| Mouse DNA sequence from clone RP23-316D8 on chromosome 2, complete sequence Length = 178882 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2130 cctttgtaagtacatgcattgct 2152 ||||||||||||||||||||||| Sbjct: 15513 cctttgtaagtacatgcattgct 15535
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 670 tcggaggaggaggaggagcgct 691 |||||||||||||||||||||| Sbjct: 25358158 tcggaggaggaggaggagcgct 25358137 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 667 ggatcggaggaggaggaggag 687 ||||||||||||||||||||| Sbjct: 15101773 ggatcggaggaggaggaggag 15101753
>emb|Z83245.4|CEZK131 Caenorhabditis elegans Cosmid ZK131, complete sequence Length = 32424 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 361 ccaccaccaccacccaggaaat 382 |||||||||||||||||||||| Sbjct: 5610 ccaccaccaccacccaggaaat 5589
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 672 ggaggaggaggaggagcgctgg 693 |||||||||||||||||||||| Sbjct: 27143025 ggaggaggaggaggagcgctgg 27143004 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 668 gatcggaggaggaggaggagc 688 ||||||||||||||||||||| Sbjct: 13349252 gatcggaggaggaggaggagc 13349272
>emb|BX119911.6| Mouse DNA sequence from clone RP23-207N15 on chromosome 11 Contains five novel genes, the gene for the ortholog of human PITPNM family member 3 PITPNM3 and three CpG islands, complete sequence Length = 194732 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1477 acctggaagaagcctctttgccacag 1502 ||||| |||||||||||||||||||| Sbjct: 152530 acctgcaagaagcctctttgccacag 152555
>gb|AC007856.7|AC007856 Drosophila melanogaster, chromosome 3R, region 99B-99B, BAC clone BACR05L03, complete sequence Length = 175124 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 670 tcggaggaggaggaggagcgct 691 |||||||||||||||||||||| Sbjct: 38639 tcggaggaggaggaggagcgct 38618
>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08 Length = 135014 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 672 ggaggaggaggaggagcgctgg 693 |||||||||||||||||||||| Sbjct: 50703 ggaggaggaggaggagcgctgg 50682
>gb|AC012493.9| Homo sapiens BAC clone RP11-292K15 from 2, complete sequence Length = 170404 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2116 tggggcctttccttcctttgta 2137 |||||||||||||||||||||| Sbjct: 41607 tggggcctttccttcctttgta 41628
>gb|AC009888.1|AC009888 Drosophila melanogaster, chromosome 3R, region 99A7-99B5, BAC clones BACR48K01 and BACR48O23, complete sequence Length = 311043 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 670 tcggaggaggaggaggagcgct 691 |||||||||||||||||||||| Sbjct: 247760 tcggaggaggaggaggagcgct 247739
>ref|XM_001234112.1| PREDICTED: Gallus gallus hypothetical protein LOC770786 (LOC770786), mRNA Length = 726 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 663 ggaaggatcggaggaggaggaggag 687 ||||||| ||||||||||||||||| Sbjct: 518 ggaaggagcggaggaggaggaggag 542
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 754 gacggcggcgaaggccacggccagggcgg 782 ||||||||||||| ||||||||| ||||| Sbjct: 3997185 gacggcggcgaagaccacggccaaggcgg 3997213
>gb|BT027325.1| Gasterosteus aculeatus clone CFW244-C12 mRNA sequence Length = 1797 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctggtcc 696 |||||||||||||||||||| |||| Sbjct: 852 ggaggaggaggaggagcgctcgtcc 876
>gb|AC189454.1| Brassica rapa subsp. pekinensis clone KBrB072L17, complete sequence Length = 62227 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 667 ggatcggaggaggaggaggag 687 ||||||||||||||||||||| Sbjct: 29923 ggatcggaggaggaggaggag 29943
>gb|AC189306.1| Brassica rapa subsp. pekinensis clone KBrB032C14, complete sequence Length = 104954 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 667 ggatcggaggaggaggaggag 687 ||||||||||||||||||||| Sbjct: 26900 ggatcggaggaggaggaggag 26920
>gb|AC112945.10| Mus musculus chromosome 15, clone RP23-382O21, complete sequence Length = 189737 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ccaccaccaccacccaggaaa 381 ||||||||||||||||||||| Sbjct: 7604 ccaccaccaccacccaggaaa 7624
>gb|DQ306447.1| Lepus granatensis isolate LgMad1 hypoxanthine phosphoribosyltransferase 1 (Hprt1) gene, intron 2 Length = 1951 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1172 tggggtgctggattctatccc 1192 ||||||||||||||||||||| Sbjct: 933 tggggtgctggattctatccc 913
>ref|XM_001075000.1| PREDICTED: Rattus norvegicus similar to Sspn protein (predicted) (RGD1559723_predicted), mRNA Length = 870 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 757 ggcggcgaaggccacggccag 777 ||||||||||||||||||||| Sbjct: 405 ggcggcgaaggccacggccag 385
>ref|XM_575721.2| PREDICTED: Rattus norvegicus similar to Sspn protein (predicted) (RGD1559723_predicted), mRNA Length = 902 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 757 ggcggcgaaggccacggccag 777 ||||||||||||||||||||| Sbjct: 405 ggcggcgaaggccacggccag 385
>emb|CU013414.1| Homo sapiens MYH9, mRNA (cDNA clone IMAGE:100000287), complete cds, without stop codon, in Gateway system Length = 5914 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2791 ggaggaggaggaggagcgctg 2811
>emb|CU013126.1| Homo sapiens MYH9, mRNA (cDNA clone IMAGE:100000383), complete cds, with stop codon, in Gateway system Length = 5917 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2791 ggaggaggaggaggagcgctg 2811
>ref|XM_001083662.1| PREDICTED: Macaca mulatta similar to myosin, heavy polypeptide 9, non-muscle (LOC695017), mRNA Length = 7393 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2511 ggaggaggaggaggagcgctg 2531
>ref|NM_122509.1| Arabidopsis thaliana nutrient reservoir/ rhodopsin-like receptor/ structural constituent of cell wall (AT5G26080) mRNA, complete cds Length = 426 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 659 aggtggaaggatcggaggaggaggaggag 687 ||||||| |||||||||||||||||||| Sbjct: 249 aggtggatagatcggaggaggaggaggag 221
>gb|AF067614.1| Caenorhabditis elegans cosmid T03A1, complete sequence Length = 35318 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 668 gatcggaggaggaggaggagc 688 ||||||||||||||||||||| Sbjct: 6468 gatcggaggaggaggaggagc 6448
>gb|AY729047.1| Crithidia fasciculata sequence-specific RNA-binding protein (RBP45) gene, complete cds Length = 3828 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1956 tgccactgccgttgttgttgt 1976 ||||||||||||||||||||| Sbjct: 2474 tgccactgccgttgttgttgt 2454
>gb|AC131778.3| Mus musculus BAC clone RP24-328C2 from chromosome 7, complete sequence Length = 175406 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 951 atatgattccagaggaaacag 971 ||||||||||||||||||||| Sbjct: 115439 atatgattccagaggaaacag 115459
>gb|BT013546.1| Lycopersicon esculentum clone 132267F, mRNA sequence Length = 2014 Score = 42.1 bits (21), Expect = 8.4 Identities = 63/77 (81%) Strand = Plus / Plus Query: 907 agtgctagtgtctttggcgtttcaacacaatcaatgcagtgttcatatgattccagagga 966 ||||| ||||| ||||| |||||| || |||||||| ||||||||||| |||||| Sbjct: 577 agtgcaagtgtttttggagtttcagtccagtcaatgcaatgttcatatgaccaaagagga 636 Query: 967 aacagtgttccaacgat 983 ||||| || |||||||| Sbjct: 637 aacagcgtgccaacgat 653 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1111 atggcattgatgttcactgtttggc 1135 |||||||||||||||| |||||||| Sbjct: 785 atggcattgatgttcattgtttggc 809
>gb|AC124833.1| Homo sapiens BAC clone RP11-324E12 from 7, complete sequence Length = 80050 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 664 gaaggatcggaggaggaggaggagc 688 |||||||||| |||||||||||||| Sbjct: 78218 gaaggatcgggggaggaggaggagc 78242
>gb|BC049849.1| Homo sapiens cDNA clone IMAGE:5563109, partial cds Length = 4271 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2921 ggaggaggaggaggagcgctg 2941
>ref|XM_544551.2| PREDICTED: Canis familiaris hypothetical LOC487426 (LOC487426), mRNA Length = 1041 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 761 gcgaaggccacggccagggcg 781 ||||||||||||||||||||| Sbjct: 638 gcgaaggccacggccagggcg 618
>gb|AC111140.11| Mus musculus chromosome 3, clone RP23-369L16, complete sequence Length = 236182 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2080 tcactaacttatatgtatcttgatt 2104 |||||||||| |||||||||||||| Sbjct: 217737 tcactaacttctatgtatcttgatt 217761
>ref|NM_002473.3| Homo sapiens myosin, heavy chain 9, non-muscle (MYH9), mRNA Length = 7474 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2956 ggaggaggaggaggagcgctg 2976
>dbj|AK147430.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M5C1040F03 product:myosin heavy chain IX, full insert sequence Length = 7372 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2951 ggaggaggaggaggagcgctg 2971
>dbj|AK147407.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M5C1034I06 product:myosin heavy chain IX, full insert sequence Length = 7365 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2944 ggaggaggaggaggagcgctg 2964
>dbj|AK147296.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1009M09 product:myosin heavy chain IX, full insert sequence Length = 7366 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2941 ggaggaggaggaggagcgctg 2961
>dbj|AK147235.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1000I08 product:myosin heavy chain IX, full insert sequence Length = 7366 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2941 ggaggaggaggaggagcgctg 2961
>dbj|AK147233.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1000D20 product:myosin heavy chain IX, full insert sequence Length = 7362 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2941 ggaggaggaggaggagcgctg 2961
>dbj|AK147223.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421019F08 product:myosin heavy chain IX, full insert sequence Length = 7359 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2934 ggaggaggaggaggagcgctg 2954
>dbj|AK147222.1| Mus musculus 15 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:M421013D17 product:myosin heavy chain IX, full insert sequence Length = 7350 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2929 ggaggaggaggaggagcgctg 2949
>dbj|AK147221.1| Mus musculus 16 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421012L14 product:myosin heavy chain IX, full insert sequence Length = 7309 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2888 ggaggaggaggaggagcgctg 2908
>dbj|AK147216.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M421007L07 product:myosin heavy chain IX, full insert sequence Length = 7304 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2883 ggaggaggaggaggagcgctg 2903
>dbj|AK147215.1| Mus musculus 15 days embryo liver cDNA, RIKEN full-length enriched library, clone:M421006M24 product:myosin heavy chain IX, full insert sequence Length = 7353 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2928 ggaggaggaggaggagcgctg 2948
>dbj|AK147211.1| Mus musculus 15 days embryo liver cDNA, RIKEN full-length enriched library, clone:M421003O18 product:myosin heavy chain IX, full insert sequence Length = 7410 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2985 ggaggaggaggaggagcgctg 3005
>dbj|AK147210.1| Mus musculus 15 days embryo liver cDNA, RIKEN full-length enriched library, clone:M421003H12 product:myosin heavy chain IX, full insert sequence Length = 7366 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2941 ggaggaggaggaggagcgctg 2961
>dbj|AK147209.1| Mus musculus 15 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M421002M21 product:myosin heavy chain IX, full insert sequence Length = 7362 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2941 ggaggaggaggaggagcgctg 2961
>ref|NM_022410.2| Mus musculus myosin, heavy polypeptide 9, non-muscle (Myh9), transcript variant 1, mRNA dbj|AK147208.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421002F11 product:myosin heavy chain IX, full insert sequence Length = 7371 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2950 ggaggaggaggaggagcgctg 2970
>dbj|AK147206.1| Mus musculus 15 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:M421002E03 product:myosin heavy chain IX, full insert sequence Length = 7363 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2942 ggaggaggaggaggagcgctg 2962
>dbj|AK147203.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:M421001K04 product:myosin heavy chain IX, full insert sequence Length = 7354 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2933 ggaggaggaggaggagcgctg 2953
>gb|AE005991.1| Caulobacter crescentus CB15 section 317 of 359 of the complete genome Length = 12490 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 753 ggacggcggcgaaggccacgg 773 ||||||||||||||||||||| Sbjct: 6944 ggacggcggcgaaggccacgg 6964
>tpg|BK002660.1| TPA_inf: Drosophila melanogaster HDC14456 (HDC14456) gene, complete cds Length = 192 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 667 ggatcggaggaggaggaggag 687 ||||||||||||||||||||| Sbjct: 59 ggatcggaggaggaggaggag 39
>dbj|AK041396.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630006O13 product:hypothetical protein, full insert sequence Length = 4524 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1478 cctggaagaagcctctttgccacag 1502 |||| |||||||||||||||||||| Sbjct: 1401 cctgcaagaagcctctttgccacag 1377
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 975 tccaacgattctcttgatgatgcaa 999 ||||| ||||||||||||||||||| Sbjct: 25349982 tccaatgattctcttgatgatgcaa 25350006 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 667 ggatcggaggaggaggaggag 687 ||||||||||||||||||||| Sbjct: 26983396 ggatcggaggaggaggaggag 26983376
>emb|Z82215.1|HS68O2 Human DNA sequence from clone RP1-68O2 on chromosome 22 Contains the 5' end of the APOL2 gene for apolipoprotein L 2, the APOL gene for apolipoprotein L, the MYH9 gene for nonmuscle type myosin heavy chain 9. ESTs, STSs and GSSs, complete sequence Length = 139389 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 69213 ggaggaggaggaggagcgctg 69193
>emb|CR456526.1| Homo sapiens MYH9 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.MYH9) Length = 5998 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2853 ggaggaggaggaggagcgctg 2873
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 756 cggcggcgaaggccacggccagggc 780 ||||||| ||||||||||||||||| Sbjct: 14870 cggcggcaaaggccacggccagggc 14894
>emb|BX571875.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 17/17 Length = 124056 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1955 gtgccactgccgttgttgttg 1975 ||||||||||||||||||||| Sbjct: 78141 gtgccactgccgttgttgttg 78161
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 359 ctccaccaccaccacccaggaaatc 383 |||||||||||||||||| |||||| Sbjct: 289921 ctccaccaccaccacccacgaaatc 289897
>emb|AL832639.2|HSM803949 Homo sapiens mRNA; cDNA DKFZp451J0218 (from clone DKFZp451J0218); complete cds Length = 5830 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2717 ggaggaggaggaggagcgctg 2737
>emb|AJ312390.1|MMU312390 Mus musculus mRNA for nonmuscle heavy chain myosin II-A (Myh9 gene) Length = 7355 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2934 ggaggaggaggaggagcgctg 2954
>gb|AC004863.5|AC004863 Homo sapiens PAC clone RP4-708P22 from 7, complete sequence Length = 133030 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 664 gaaggatcggaggaggaggaggagc 688 |||||||||| |||||||||||||| Sbjct: 168 gaaggatcgggggaggaggaggagc 192
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 667 ggatcggaggaggaggaggag 687 ||||||||||||||||||||| Sbjct: 47874 ggatcggaggaggaggaggag 47854
>gb|AC010679.6| Homo sapiens BAC clone RP11-128O11 from 2, complete sequence Length = 188937 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1744 cgtcggccattgctgatgctt 1764 ||||||||||||||||||||| Sbjct: 147654 cgtcggccattgctgatgctt 147674
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01 Length = 146144 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 668 gatcggaggaggaggaggagc 688 ||||||||||||||||||||| Sbjct: 89610 gatcggaggaggaggaggagc 89630
>dbj|AB191263.1| Homo sapiens MYH9 mRNA for non-muscle myosin heavy polypeptide 9, complete cds Length = 7450 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2952 ggaggaggaggaggagcgctg 2972
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 667 ggatcggaggaggaggaggag 687 ||||||||||||||||||||| Sbjct: 131987 ggatcggaggaggaggaggag 131967
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 975 tccaacgattctcttgatgatgcaa 999 ||||| ||||||||||||||||||| Sbjct: 43072 tccaatgattctcttgatgatgcaa 43096
>gb|AC101851.11| Mus musculus chromosome 7, clone RP23-276E14, complete sequence Length = 175088 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 951 atatgattccagaggaaacag 971 ||||||||||||||||||||| Sbjct: 34882 atatgattccagaggaaacag 34902
>dbj|AP004475.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT01I13, TM0010, complete sequence Length = 87900 Score = 42.1 bits (21), Expect = 8.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1377 cagatggcagaccctttgactgcactcatgtatgcggtgcaagtgatgaatttcctcaag 1436 |||||||| || ||||||||||| | |||||||| || ||||| |||| ||| |||||| Sbjct: 22654 cagatggccgatcctttgactgctttgatgtatgcagtacaagtcatgagttttctcaag 22713 Query: 1437 a 1437 | Sbjct: 22714 a 22714
>gb|AC116736.14| Mus musculus chromosome 3, clone RP23-370O17, complete sequence Length = 180168 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2080 tcactaacttatatgtatcttgatt 2104 |||||||||| |||||||||||||| Sbjct: 143459 tcactaacttctatgtatcttgatt 143435
>gb|AF120276.1|AF120276 Oryctolagus cuniculus sarcospan mRNA, complete cds Length = 2068 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 757 ggcggcgaaggccacggccag 777 ||||||||||||||||||||| Sbjct: 455 ggcggcgaaggccacggccag 435
>gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, region 92A1-92A2, BAC clone BACR48K23, complete sequence Length = 173564 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 667 ggatcggaggaggaggaggag 687 ||||||||||||||||||||| Sbjct: 32972 ggatcggaggaggaggaggag 32952
>gb|AF149413.1|T1N24 Arabidopsis thaliana BAC T1N24 Length = 127053 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 659 aggtggaaggatcggaggaggaggaggag 687 ||||||| |||||||||||||||||||| Sbjct: 37886 aggtggatagatcggaggaggaggaggag 37914
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2160 ctggactgagaagtttctgga 2180 ||||||||||||||||||||| Sbjct: 1731706 ctggactgagaagtttctgga 1731686
>emb|AL583886.11| Mouse DNA sequence from clone RP23-402G11 on chromosome 15, complete sequence Length = 198994 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 166840 ggaggaggaggaggagcgctg 166860
>gb|M81105.1|HUMMYH9 Homo sapiens MYH9 (cellular myosin heavy chain) mRNA, 5' end Length = 4152 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 2911 ggaggaggaggaggagcgctg 2931
>dbj|D11393.1|HUMHNM Homo sapiens mRNA for non-muscle myosin heavy chain Length = 716 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 ggaggaggaggaggagcgctg 692 ||||||||||||||||||||| Sbjct: 43 ggaggaggaggaggagcgctg 63
>emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC DP35C12 of chromosome 5 of Podospora anserina Length = 101256 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 359 ctccaccaccaccacccaggaaatc 383 |||||||||||||||||| |||||| Sbjct: 32274 ctccaccaccaccacccacgaaatc 32298 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 353,308,694 Number of extensions: 21243608 Number of successful extensions: 461197 Number of sequences better than 10.0: 138 Number of HSP's gapped: 461172 Number of HSP's successfully gapped: 242 Length of query: 2205 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2182 Effective length of database: 18,503,978,556 Effective search space: 40375681209192 Effective search space used: 40375681209192 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
