ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf89l13 |
|---|---|
| Clone Library Name | barley_pub |
>Q5YD48:ACF_MOUSE APOBEC1 complementation factor - Mus musculus (Mouse)| Length = 595 Score = 128 bits (322), Expect = 1e-28 Identities = 98/300 (32%), Positives = 152/300 (50%), Gaps = 4/300 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 +G E+F+G LPR E L + G+I ++R+M D NG ++G+ FV F+ ++ A A Sbjct: 54 RGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRLMMDFNGNNRGYAFVTFSNKQEAKNAI 113 Query: 277 RQKNGVELQ-GKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPN 453 +Q N E++ G+ L V S+D LF G + K EE + K + V VD+ + P Sbjct: 114 KQLNNYEIRTGRLLGVCASVDNCRLFRGGIPKTKKREEILSEMKKVTEGV--VDVIVYP- 170 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHP-AINWTERESNVDAD 630 S + + NRGFAFV + SH AAA R L G HP A++W E E VD D Sbjct: 171 ---SAADKTKNRGFAFVEYESHRAAAMARRRLLPGRIQLWG--HPIAVDWAEPEVEVDED 225 Query: 631 EMAKIRTAFVGNLPANANEDYLKKLFGRF--GEVIRVAVSRKGQYPVGFIHFGSRSELDN 804 M+ ++ +V NL + +E+ ++K F G V RV R F+HF +R + Sbjct: 226 TMSSVKILYVRNLMLSTSEEMIEKEFNSIKPGAVERVKKIR----DYAFVHFSNREDAVE 281 Query: 805 AIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGRY 984 A+K ++GK + G I+V++A+P V+ D+ R + +GG+ G Y Sbjct: 282 AMKALNGKVLDGS------PIEVTLAKP-VDKDS-------YVRYTRGTGGRNTMLQGEY 327
>Q923K9:ACF_RAT APOBEC1 complementation factor - Rattus norvegicus (Rat)| Length = 594 Score = 127 bits (320), Expect = 2e-28 Identities = 93/274 (33%), Positives = 144/274 (52%), Gaps = 4/274 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 +G E+F+G LPR E L + G+I ++R+M D NG ++G+ FV F+ ++ A A Sbjct: 54 RGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKQEAKNAI 113 Query: 277 RQKNGVELQ-GKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPN 453 +Q N E++ G+ L V S+D LF G + K EE + K + V VD+ + P Sbjct: 114 KQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGV--VDVIVYP- 170 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHP-AINWTERESNVDAD 630 S + + NRGFAFV + SH AAA R L G HP A++W E E VD D Sbjct: 171 ---SAADKTKNRGFAFVEYESHRAAAMARRRLLPGRIQLWG--HPIAVDWAEPEVEVDED 225 Query: 631 EMAKIRTAFVGNLPANANEDYLKKLFGRF--GEVIRVAVSRKGQYPVGFIHFGSRSELDN 804 M+ ++ +V NL + +E+ ++K F G V RV R F+HF +R + Sbjct: 226 TMSSVKILYVRNLMLSTSEEMIEKEFNSIKPGAVERVKKIR----DYAFVHFSNREDAVE 281 Query: 805 AIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN 906 A+K ++GK + G I+V++A+P V+ D+ Sbjct: 282 AMKALNGKVLDGS------PIEVTLAKP-VDKDS 308
>Q5R9H4:ACF_PONPY APOBEC1 complementation factor - Pongo pygmaeus (Orangutan)| Length = 587 Score = 127 bits (319), Expect = 2e-28 Identities = 98/299 (32%), Positives = 151/299 (50%), Gaps = 4/299 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 +G E+F+G LPR E L + G+I ++R+M D NG ++G+ FV F+ + A A Sbjct: 54 RGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKLEAKNAI 113 Query: 277 RQKNGVELQ-GKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPN 453 +Q N E++ G+ L V S+D LF G + K EE + K + V VD+ + P Sbjct: 114 KQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGV--VDVIVYP- 170 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHP-AINWTERESNVDAD 630 S + + NRGFAFV + SH AAA R L G HP A++W E E VD D Sbjct: 171 ---SAADKTKNRGFAFVEYESHRAAAMARRKLLPGRIQLWG--HPIAVDWAEPEVEVDED 225 Query: 631 EMAKIRTAFVGNLPANANEDYLKKLFGRF--GEVIRVAVSRKGQYPVGFIHFGSRSELDN 804 M+ ++ +V NL + +E+ ++K F G V RV R F+HF +R + Sbjct: 226 TMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIR----DYAFVHFSNREDAVE 281 Query: 805 AIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGR 981 A+K ++GK + G I+V++A+P V+ D+ R + G+ YS G+ Sbjct: 282 AMKALNGKVLDGS------PIEVTLAKP-VDKDSYVRYTRGTGGRGTMLQGEYTYSLGQ 333
>Q9NQ94:ACF_HUMAN APOBEC1 complementation factor - Homo sapiens (Human)| Length = 594 Score = 126 bits (317), Expect = 4e-28 Identities = 97/300 (32%), Positives = 151/300 (50%), Gaps = 5/300 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 +G E+F+G LPR E L + G+I ++R+M D NG ++G+ FV F+ + A A Sbjct: 54 RGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAI 113 Query: 277 RQKNGVELQ-GKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPN 453 +Q N E++ G+ L V S+D LF G + K EE + K + V VD+ + P Sbjct: 114 KQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGV--VDVIVYP- 170 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLR--IGSRTDFMLGGILHPAINWTERESNVDA 627 S + + NRGFAFV + SH AAA R + R GI A++W E E VD Sbjct: 171 ---SAADKTKNRGFAFVEYESHRAAAMARRKLLPGRIQLWGHGI---AVDWAEPEVEVDE 224 Query: 628 DEMAKIRTAFVGNLPANANEDYLKKLFGRF--GEVIRVAVSRKGQYPVGFIHFGSRSELD 801 D M+ ++ +V NL + +E+ ++K F G V RV R F+HF +R + Sbjct: 225 DTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIR----DYAFVHFSNREDAV 280 Query: 802 NAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGR 981 A+K ++GK + G I+V++A+P V+ D+ R + G+ YS G+ Sbjct: 281 EAMKALNGKVLDGS------PIEVTLAKP-VDKDSYVRYTRGTGGRGTMLQGEYTYSLGQ 333
>O43390:HNRPR_HUMAN Heterogeneous nuclear ribonucleoprotein R - Homo sapiens (Human)| Length = 633 Score = 125 bits (314), Expect = 9e-28 Identities = 89/293 (30%), Positives = 146/293 (49%), Gaps = 3/293 (1%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK 276 G EVFVG +PR E L +F G I DLR+M D +G ++G+ F+ F +E A A Sbjct: 164 GTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAV 223 Query: 277 RQKNGVELQ-GKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPN 453 + + E++ GK L V +S+ + LF G++ K + E E K + ++ V L P+ Sbjct: 224 KLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPD 283 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLR-IGSRTDFMLGGILHPAINWTERESNVDAD 630 ++ NRGF F+ + H +AA+ R + S + G ++ + W + D + Sbjct: 284 ------DKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVV--TVEWADPVEEPDPE 335 Query: 631 EMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYPVGFIHFGSRSELDNAI 810 MAK++ FV NL E+ L+K F FG++ RV K F+HF R A+ Sbjct: 336 VMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERV----KKLKDYAFVHFEDRGAAVKAM 391 Query: 811 KEMDGKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDY 969 EM+GK + G +I++ +A+P +K+ +E R+++ S DY Sbjct: 392 DEMNGKEIEGE------EIEIVLAKP----PDKKRKERQAARQASRSTAYEDY 434
>O60506:HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q - Homo sapiens (Human)| Length = 623 Score = 123 bits (308), Expect = 4e-27 Identities = 85/276 (30%), Positives = 136/276 (49%), Gaps = 2/276 (0%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK 276 G E+FVG +PR E L +F G I DLR+M D G+++G+ FV F +E A A Sbjct: 161 GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAV 220 Query: 277 RQKNGVELQ-GKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPN 453 + N E++ GK + V +S+ + LF G++ K + E+ E K + + V L P+ Sbjct: 221 KLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPD 280 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADE 633 ++ NRGF F+ + H AA+ R + G + + W + + D + Sbjct: 281 ------DKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVG-TVEWADPIEDPDPEV 333 Query: 634 MAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYPVGFIHFGSRSELDNAIK 813 MAK++ FV NL E+ L+K F +FG++ RV K FIHF R A++ Sbjct: 334 MAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV----KKLKDYAFIHFDERDGAVKAME 389 Query: 814 EMDGKTVSGPNRGPSFKIQVSVARPAVENDNKRSRE 921 EM+GK + G N I++ A+P + +R + Sbjct: 390 EMNGKDLEGEN------IEIVFAKPPDQKRKERKAQ 419
>Q7TP47:HNRPQ_RAT Heterogeneous nuclear ribonucleoprotein Q - Rattus norvegicus (Rat)| Length = 533 Score = 122 bits (307), Expect = 6e-27 Identities = 85/276 (30%), Positives = 136/276 (49%), Gaps = 2/276 (0%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK 276 G E+FVG +PR E L +F G I DLR+M D G+++G+ FV F +E A A Sbjct: 71 GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAV 130 Query: 277 RQKNGVELQ-GKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPN 453 + N E++ GK + V +S+ + LF G++ K + E+ E K + + V L P+ Sbjct: 131 KLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPD 190 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADE 633 ++ NRGF F+ + H AA+ R + G + + W + + D + Sbjct: 191 ------DKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVG-TVEWADPIEDPDPEV 243 Query: 634 MAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYPVGFIHFGSRSELDNAIK 813 MAK++ FV NL E+ L+K F +FG++ RV K FIHF R A++ Sbjct: 244 MAKVKVLFVRNLANTVTEEILEKSFSQFGKLERV----KKLKDYAFIHFDERDGAVKAME 299 Query: 814 EMDGKTVSGPNRGPSFKIQVSVARPAVENDNKRSRE 921 EM+GK + G N I++ A+P + +R + Sbjct: 300 EMNGKDLEGEN------IEIVFAKPPDQKRKERKAQ 329
>Q7TMK9:HNRPQ_MOUSE Heterogeneous nuclear ribonucleoprotein Q - Mus musculus (Mouse)| Length = 623 Score = 122 bits (307), Expect = 6e-27 Identities = 85/276 (30%), Positives = 136/276 (49%), Gaps = 2/276 (0%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK 276 G E+FVG +PR E L +F G I DLR+M D G+++G+ FV F +E A A Sbjct: 161 GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAV 220 Query: 277 RQKNGVELQ-GKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPN 453 + N E++ GK + V +S+ + LF G++ K + E+ E K + + V L P+ Sbjct: 221 KLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPD 280 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADE 633 ++ NRGF F+ + H AA+ R + G + + W + + D + Sbjct: 281 ------DKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVG-TVEWADPIEDPDPEV 333 Query: 634 MAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYPVGFIHFGSRSELDNAIK 813 MAK++ FV NL E+ L+K F +FG++ RV K FIHF R A++ Sbjct: 334 MAKVKVLFVRNLANTVTEEILEKSFSQFGKLERV----KKLKDYAFIHFDERDGAVKAME 389 Query: 814 EMDGKTVSGPNRGPSFKIQVSVARPAVENDNKRSRE 921 EM+GK + G N I++ A+P + +R + Sbjct: 390 EMNGKDLEGEN------IEIVFAKPPDQKRKERKAQ 419
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 77.0 bits (188), Expect = 4e-13 Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 20/271 (7%) Frame = +1 Query: 88 RRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAY 267 RR VFV LP S T L+++F G IV ++ ++G S+G+GFV+F + + A+ Sbjct: 107 RRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAH 166 Query: 268 IAKRQKNGVELQGKRLAVDLSLDQ------DTLFFGNLCKEWSAEEFEELIHKTFKDVIS 429 A + N + K + V + + + + K A+ E+L+ + F + Sbjct: 167 AAIQTLNSTIVADKEIYVGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKFAEFGK 226 Query: 430 -VDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDF-----MLGGILHPA 591 V LA+A + + RL RG+AFV F + A R + T F +G A Sbjct: 227 IVSLAIAKD------ENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKA 280 Query: 592 -----INWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEV--IRVAVSRK 750 + +E + + +AK+ +V N+ E+ L+K F + G + ++ K Sbjct: 281 EREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEK 340 Query: 751 GQYP-VGFIHFGSRSELDNAIKEMDGKTVSG 840 G+ GF+ F + E +A+K G+ G Sbjct: 341 GKSKGFGFVCFSTPEEAIDAVKTFHGQMFHG 371 Score = 67.4 bits (163), Expect = 3e-10 Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 17/258 (6%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKR 279 A ++VG L S TEG L + F+ + +R+ KD +G S +G+ F R+ A +A Sbjct: 24 ASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIE 83 Query: 280 QKNGVELQGKRLAVDLSL--------DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVD 435 +KN L GK + V S+ +F NL + + +++ K F +++S Sbjct: 84 KKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMF-KKFGNIVSCK 142 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRT-----DFMLGGILHPAINW 600 +A T + +RG+ FV+F AA ++ + T + +G + Sbjct: 143 VA--------TLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVG-------KF 187 Query: 601 TERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ---YPVGF 771 ++ V +E K ++ NL A+ +ED L++ F FG+++ +A+++ F Sbjct: 188 MKKTDRVKPEE--KYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAF 245 Query: 772 IHFGSRSELDNAIKEMDG 825 ++F + + A + ++G Sbjct: 246 VNFDNPEDARRAAETVNG 263 Score = 55.8 bits (133), Expect = 9e-07 Identities = 32/86 (37%), Positives = 48/86 (55%) Frame = +1 Query: 73 YDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAE 252 ++EQ K + ++V + + TE LR+ FS CG I ++M D+ G SKGFGFV F+ Sbjct: 294 HEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFST 353 Query: 253 RECAYIAKRQKNGVELQGKRLAVDLS 330 E A A + +G GK L V ++ Sbjct: 354 PEEAIDAVKTFHGQMFHGKPLYVAIA 379
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 74.7 bits (182), Expect = 2e-12 Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 24/277 (8%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D RR +F+ L S L + FS+ G IV ++ D +G SKG+GFV++A Sbjct: 115 DPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANE 174 Query: 256 ECAYIAKRQKNGVELQGKRLAVDLSLDQD--------TLFFGNLCKEWSAEEFEELIHKT 411 E A A + NG+ L K++ V L + T F K + ++ + Sbjct: 175 ESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNA 234 Query: 412 FKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI--GSRTD---FMLGG 576 F + + A+ SK GF FV F + AAR + G + D + +G Sbjct: 235 FGEYGKITSAVVMKDGEGKSK-----GFGFVNFENADDAARAVESLNGHKFDDKEWYVGR 289 Query: 577 ILHPAINWTE----RESNV-DADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAV 741 + TE E N+ +A + + +V NL + +++ LK++F FG V V Sbjct: 290 AQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKV 349 Query: 742 SR------KGQYPVGFIHFGSRSELDNAIKEMDGKTV 834 R KG GF+ F + E A+ ++ GK + Sbjct: 350 MRDPNGTSKGS---GFVAFATPEEATEAMSQLSGKMI 383 Score = 55.8 bits (133), Expect = 9e-07 Identities = 32/102 (31%), Positives = 54/102 (52%) Frame = +1 Query: 25 RREEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 ++ E + + R + E + + + ++V L S ++ L+EIFS G + ++M+ Sbjct: 292 KKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMR 351 Query: 205 DQNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 D NG SKG GFV FA E A A Q +G ++ K L V ++ Sbjct: 352 DPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIA 393
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 73.2 bits (178), Expect = 5e-12 Identities = 63/280 (22%), Positives = 125/280 (44%), Gaps = 15/280 (5%) Frame = +1 Query: 46 DRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVS 222 D++ A+ G + Q A ++VG L S +E L +IFS G + +R+ +D S Sbjct: 20 DQKQAATGS-ESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTS 78 Query: 223 KGFGFVRFAERECAYIAKRQKNGVELQGKRLAV-----DLSL---DQDTLFFGNLCKEWS 378 G+ +V F + E A Q N ++G+ + D SL +F NL + Sbjct: 79 LGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDID 138 Query: 379 AEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRT 558 + + F D++S +A T + ++GF FV F GAA I + Sbjct: 139 NKALYDTF-SVFGDILSSKIA--------TDENGKSKGFGFVHFEEEGAAKEA--IDALN 187 Query: 559 DFMLGG---ILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVI 729 +L G + P ++ ER+S ++ + A +V N+ + ++ ++LF +FG ++ Sbjct: 188 GMLLNGQEIYVAPHLSRKERDSQLE-ETKAHYTNLYVKNINSETTDEQFQELFAKFGPIV 246 Query: 730 RVAVSRKGQYPV---GFIHFGSRSELDNAIKEMDGKTVSG 840 ++ + + GF+++ + A++ ++ ++G Sbjct: 247 SASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNG 286 Score = 73.2 bits (178), Expect = 5e-12 Identities = 79/287 (27%), Positives = 124/287 (43%), Gaps = 32/287 (11%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R+ +F+ L L + FS G+I+ +I D+NG SKGFGFV F E Sbjct: 117 DPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEE 176 Query: 256 ECAYIAKRQKNGVELQGKRLAV---------DLSLDQ-----DTLFFGNLCKEWSAEEFE 393 A A NG+ L G+ + V D L++ L+ N+ E + E+F+ Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLG 573 EL K F ++S L + D +GF FV + H A + + + D L Sbjct: 237 ELFAK-FGPIVSASL--EKDADGKL------KGFGFVNYEKHEDAVKA--VEALNDSELN 285 Query: 574 G---ILHPAINWTER----ESNVDA---DEMAKIR--TAFVGNLPANANEDYLKKLFGRF 717 G + A ER + +A ++MAK + FV NL + +++ L++ F + Sbjct: 286 GEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPY 345 Query: 718 GEVIRVAVSR------KGQYPVGFIHFGSRSELDNAIKEMDGKTVSG 840 G + V R KG GF+ F + E AI E + + V+G Sbjct: 346 GTITSAKVMRTENGKSKG---FGFVCFSTPEEATKAITEKNQQIVAG 389 Score = 53.5 bits (127), Expect = 4e-06 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 4/109 (3%) Frame = +1 Query: 28 REEPKMDRRAASHGDYD----EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLR 195 R + K +R Y+ E+ + +G +FV L S + L E F+ G I + Sbjct: 293 RAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAK 352 Query: 196 IMKDQNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQD 342 +M+ +NG SKGFGFV F+ E A A +KN + GK L V ++ +D Sbjct: 353 VMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKD 401 Score = 49.7 bits (117), Expect = 6e-05 Identities = 39/143 (27%), Positives = 64/143 (44%) Frame = +1 Query: 70 DYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFA 249 D ++ + ++V + T+ +E+F+ G IV + KD +G KGFGFV + Sbjct: 208 DSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYE 267 Query: 250 ERECAYIAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVIS 429 + E A A N EL G++L V + ++ L K++ A E++ Sbjct: 268 KHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMH-VLKKQYEAYRLEKMAKYQ-----G 321 Query: 430 VDLAMAPNLDSSTSKRRLNRGFA 498 V+L NLD S +L FA Sbjct: 322 VNL-FVKNLDDSVDDEKLEEEFA 343
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 72.8 bits (177), Expect = 7e-12 Identities = 80/299 (26%), Positives = 133/299 (44%), Gaps = 20/299 (6%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKR 279 A ++VG L TE L E FS G I+ +RI +D S + +V F + A A Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70 Query: 280 QKNGVELQGKRLAV-----DLSLDQD---TLFFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N ++GK + + D SL + +F NL K + + + + F +++S + Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTV-SAFGNILSCN 129 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGG---ILHPAINWTE 606 + D + SK G+ FV F +H AA R ++ +L G + + E Sbjct: 130 VVC----DENGSK-----GYGFVHFETHEAAERAIK--KMNGMLLNGRKVFVGQFKSRKE 178 Query: 607 RESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAV------SRKGQYPVG 768 RE+ + A + ++ N + +++ LK LFG+FG + V V KG G Sbjct: 179 REAELGA-RAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKG---FG 234 Query: 769 FIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN--KRSREEVKTRR 939 F+ F + A+ EM+GK ++G +I V A+ VE KR+ E++K R Sbjct: 235 FVSFERHEDAQKAVDEMNGKELNGK------QIYVGRAQKKVERQTELKRTFEQMKQDR 287 Score = 70.9 bits (172), Expect = 3e-11 Identities = 73/278 (26%), Positives = 120/278 (43%), Gaps = 24/278 (8%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R+ +FV L +S L + S G I+ ++ D+NG SKG+GFV F Sbjct: 90 DPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETH 148 Query: 256 ECAYIAKRQKNGVELQGKRLAVD--LSLDQDTLFFGNLCKEWS---AEEF-EELIHKTFK 417 E A A ++ NG+ L G+++ V S + G KE+ + F E++ + K Sbjct: 149 EAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLK 208 Query: 418 DVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILH---- 585 D+ A ++ T + ++GF FV F H A + + D M G L+ Sbjct: 209 DLFG-KFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV------DEMNGKELNGKQI 261 Query: 586 ---PAINWTERESNV---------DADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVI 729 A ER++ + D ++ +V NL +++ L+K F FG + Sbjct: 262 YVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTIT 321 Query: 730 RVAVSRKG--QYPVGFIHFGSRSELDNAIKEMDGKTVS 837 V +G GF+ F S E A+ EM+G+ V+ Sbjct: 322 SAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 359 Score = 42.4 bits (98), Expect = 0.010 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 4/105 (3%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDE--QDR--RVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLR 195 R + K++R+ +++ QDR R + ++V L + LR+ FS G I + Sbjct: 265 RAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAK 324 Query: 196 IMKDQNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 +M + G SKGFGFV F+ E A A + NG + K L V L+ Sbjct: 325 VMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 72.0 bits (175), Expect = 1e-11 Identities = 80/300 (26%), Positives = 129/300 (43%), Gaps = 21/300 (7%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKR 279 A ++VG L TE L E FS G I+ +R+ +D S G+ ++ F + A A Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70 Query: 280 QKNGVELQGKRLAV-----DLSLDQD---TLFFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N L+G+ + + D L + +F NL + + TF +++S Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTF-STFGNILSCK 129 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWT---- 603 +A +RGF FV F +H AA + + M G +L+ + Sbjct: 130 VAC---------DEHGSRGFGFVHFETHEAAQQAINT------MNGMLLNDRKVFVGHFK 174 Query: 604 ---ERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKG---QYPV 765 ERE+ + A + + +V NLP + +E L+ LF +FG+++ V V R Sbjct: 175 SRREREAELGARAL-EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCF 233 Query: 766 GFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN--KRSREEVKTRR 939 GF++F E A+ M+GK VSG + A+ VE N KR E++K R Sbjct: 234 GFVNFEKHEEAQKAVVHMNGKEVSGR------LLYAGRAQKRVERQNELKRRFEQMKQDR 287 Score = 65.5 bits (158), Expect = 1e-09 Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 27/269 (10%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +F+ L S L + FST G I+ ++ D++G S+GFGFV F E A A N Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMN 159 Query: 289 GVELQGKRLAVD--------------LSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVI 426 G+ L +++ V +L+ ++ NL + + ++L + F ++ Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQ-FGKML 218 Query: 427 SVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHP--AINW 600 SV + M N S R F FV F H A + + + + G +L+ A Sbjct: 219 SVKV-MRDNSGHS-------RCFGFVNFEKHEEAQKAV-VHMNGKEVSGRLLYAGRAQKR 269 Query: 601 TERESNVDA--DEMAKIR-------TAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKG 753 ER++ + ++M + R +V NL + ++D L+K F +G + V +G Sbjct: 270 VERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEG 329 Query: 754 QYP--VGFIHFGSRSELDNAIKEMDGKTV 834 + GF+ F S E A+ EM+G+ V Sbjct: 330 GHSKGFGFVCFSSPEEATKAVTEMNGRIV 358 Score = 52.4 bits (124), Expect = 1e-05 Identities = 39/137 (28%), Positives = 67/137 (48%) Frame = +1 Query: 88 RRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAY 267 R ++ ++V LP E L+++FS G+++ +++M+D +G S+ FGFV F + E A Sbjct: 186 RALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQ 245 Query: 268 IAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 A NG E+ G+ L + Q + N K FE++ + V+L Sbjct: 246 KAVVHMNGKEVSGRLLYAGRA--QKRVERQNELK----RRFEQMKQDRLRRYQGVNL-YV 298 Query: 448 PNLDSSTSKRRLNRGFA 498 NLD S +L + F+ Sbjct: 299 KNLDDSIDDDKLRKEFS 315 Score = 44.7 bits (104), Expect = 0.002 Identities = 31/81 (38%), Positives = 43/81 (53%) Frame = +1 Query: 88 RRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAY 267 RR +G ++V L S + LR+ FS G I ++M + G SKGFGFV F+ E A Sbjct: 289 RRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEAT 347 Query: 268 IAKRQKNGVELQGKRLAVDLS 330 A + NG + K L V L+ Sbjct: 348 KAVTEMNGRIVGTKPLYVALA 368
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 72.0 bits (175), Expect = 1e-11 Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 24/277 (8%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D RR VF+ L R+ + + FS G I+ ++ D+ G SKG+GFV F Sbjct: 81 DPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETE 140 Query: 256 ECAYIAKRQKNGVELQGKRLAV---------DLSLDQDTLFFGNLCKEWSAEEF-EELIH 405 E A + + NG+ L GK++ V + L + F N+ + E+F +E + Sbjct: 141 EAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLK 200 Query: 406 KTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILH 585 + F+ + + + SK GF FV F + AA ++ + D G L+ Sbjct: 201 EFFEPYGKITSYKVMSKEDGKSK-----GFGFVAFETTEAAEAAVQALNGKDMGEGKSLY 255 Query: 586 PAINWTERESNVDA----DEMAKIR-------TAFVGNLPANANEDYLKKLFGRFGEV-- 726 A + E + +E+ + R +V NL ++D L+ F +G + Sbjct: 256 VARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITS 315 Query: 727 IRVAVSRKGQYP-VGFIHFGSRSELDNAIKEMDGKTV 834 +V +G+ GF+ F + SE A+ E++G+ V Sbjct: 316 AKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVV 352 Score = 56.2 bits (134), Expect = 7e-07 Identities = 62/286 (21%), Positives = 124/286 (43%), Gaps = 7/286 (2%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKR 279 A ++VG LP+ E L + FS+ G ++ +R+ +D S G+ +V F + A A Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61 Query: 280 QKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLD 459 N ++ K + + S +L + + + +K D S + Sbjct: 62 TMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSA-FGNILSCK 120 Query: 460 SSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFML--GGILHPAINWTERESNVDADE 633 +T ++ ++G+ FV F + AA + + + ML G ++ +E + E Sbjct: 121 VATDEKGNSKGYGFVHFETEEAANTSI---DKVNGMLLNGKKVYVGKFIPRKEREKELGE 177 Query: 634 MAKIRT-AFVGNLPANANEDYLKKLFGRFGEVIRVAVSRK---GQYPVGFIHFGSRSELD 801 AK+ T +V N + +++ LK+ F +G++ V K GF+ F + + Sbjct: 178 KAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAE 237 Query: 802 NAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRR 939 A++ ++GK + G S + + + + + KR EE+K +R Sbjct: 238 AAVQALNGKDM---GEGKSLYVARAQKKAERQQELKRKFEELKQKR 280 Score = 47.0 bits (110), Expect = 4e-04 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 4/105 (3%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDEQDRR----VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLR 195 R + K +R+ ++E ++ V G ++V L + + LR FS G I + Sbjct: 258 RAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAK 317 Query: 196 IMKDQNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 +M D+ G SKGFGFV F A A + NG + K L V L+ Sbjct: 318 VMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALA 362
>Q05196:PABP5_ARATH Polyadenylate-binding protein 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 668 Score = 70.5 bits (171), Expect = 3e-11 Identities = 73/280 (26%), Positives = 115/280 (41%), Gaps = 27/280 (9%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R VF+ L S L E FS+ G I+ ++ D G SKG+GFV+F + Sbjct: 123 DPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKE 182 Query: 256 ECAYIAKRQKNGVELQGKRLAVDLSLDQD--------------TLFFGNLCKEWSAEEFE 393 E A A + NG+ L K++ V + + ++ NL KE + +E Sbjct: 183 ETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDE-- 240 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAA----RVLRIGSRTD 561 + KTF + A+ S S R F FV F S AAA ++ I D Sbjct: 241 --LKKTFGKYGDISSAVVMKDQSGNS-----RSFGFVNFVSPEAAAVAVEKMNGISLGED 293 Query: 562 FMLGGILHPAINWTE------RESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGE 723 + G + E + + E + ++ NL + N++ LK++F +G Sbjct: 294 VLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGN 353 Query: 724 VIRVAVSRKGQ---YPVGFIHFGSRSELDNAIKEMDGKTV 834 V V Q GF+ + + E A+KEM+GK + Sbjct: 354 VTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMI 393 Score = 62.0 bits (149), Expect = 1e-08 Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 16/257 (6%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQ 282 + ++VG L S E L ++F+ + +LR+ +D S G+ +V FA E A A Sbjct: 45 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASRAMES 104 Query: 283 KNGVELQGKRLAVDLS-LDQDTLFFGN---LCKEWSAEEFEELIHKTFKD---VISVDLA 441 N ++ + + + LS D T G K A + +++TF ++S +A Sbjct: 105 LNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVA 164 Query: 442 MAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHP----AINWTER 609 M ++G+ FV+F A + D + G +L+ ++ R Sbjct: 165 M--------DVVGRSKGYGFVQFEKEETAQAAI------DKLNGMLLNDKQVFVGHFVRR 210 Query: 610 ESNVDADEMA--KIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRK---GQYPVGFI 774 + ++ A +V NLP +D LKK FG++G++ V + GF+ Sbjct: 211 QDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFV 270 Query: 775 HFGSRSELDNAIKEMDG 825 +F S A+++M+G Sbjct: 271 NFVSPEAAAVAVEKMNG 287 Score = 55.5 bits (132), Expect = 1e-06 Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 4/105 (3%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDEQD----RRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLR 195 R + K DR ++++ +++G+ +++ L S + L+E+FS G + + Sbjct: 299 RAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCK 358 Query: 196 IMKDQNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 +M + G+S+GFGFV ++ E A +A ++ NG + K L V L+ Sbjct: 359 VMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALA 403
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 70.5 bits (171), Expect = 3e-11 Identities = 73/286 (25%), Positives = 121/286 (42%), Gaps = 32/286 (11%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R+ +F+ L +S L + FS G I+ +++ D+NG SKG+GFV F + Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 148 Query: 256 ECAYIAKRQKNGVELQGKRLAVDLSLDQ--------------DTLFFGNLCKEWSAEEFE 393 E A A + NG+ L +++ V Q ++ N ++ E + Sbjct: 149 EAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLK 208 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLG 573 EL K F +SV + T + ++GF FV F H A + + D M G Sbjct: 209 ELFGK-FGPALSVKV--------MTDESGKSKGFGFVSFERHEDAQKAV------DEMNG 253 Query: 574 GILH-------PAINWTERESNVDA--DEMAKIR-------TAFVGNLPANANEDYLKKL 705 L+ A ER++ + ++M + R +V NL +++ L+K Sbjct: 254 KELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKE 313 Query: 706 FGRFGEVIRVAVSRKG--QYPVGFIHFGSRSELDNAIKEMDGKTVS 837 F FG + V +G GF+ F S E A+ EM+G+ V+ Sbjct: 314 FSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 359 Score = 67.0 bits (162), Expect = 4e-10 Identities = 80/303 (26%), Positives = 131/303 (43%), Gaps = 24/303 (7%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKR 279 A ++VG L TE L E FS G I+ +R+ +D S G+ +V F + A A Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 280 QKNGVELQGKRLAV-----DLSLDQD---TLFFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N ++GK + + D SL + +F NL K + + F +++S Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTF-SAFGNILSCK 129 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWT---- 603 + D + SK G+ FV F + AA R + + M G +L+ + Sbjct: 130 VVC----DENGSK-----GYGFVHFETQEAAERAI------EKMNGMLLNDRKVFVGRFK 174 Query: 604 ---ERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAV------SRKGQ 756 ERE+ + A + ++ N + +++ LK+LFG+FG + V V KG Sbjct: 175 SQKEREAELGA-RAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKG- 232 Query: 757 YPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN--KRSREEVK 930 GF+ F + A+ EM+GK ++G +I V A+ VE KR E++K Sbjct: 233 --FGFVSFERHEDAQKAVDEMNGKELNGK------QIYVGRAQKKVERQTELKRKFEQMK 284 Query: 931 TRR 939 R Sbjct: 285 QDR 287 Score = 45.1 bits (105), Expect = 0.002 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDE--QDR--RVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLR 195 R + K++R+ +++ QDR R +G ++V L + LR+ FS G I + Sbjct: 265 RAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324 Query: 196 IMKDQNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 +M + G SKGFGFV F+ E A A + NG + K L V L+ Sbjct: 325 VMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 70.1 bits (170), Expect = 4e-11 Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 24/278 (8%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R+ +F+ L +S L + FS G I+ +++ D+NG SKG+GFV F + Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 148 Query: 256 ECAYIAKRQKNGVELQGKRLAVD--LSLDQDTLFFGNLCKEWS---AEEF-EELIHKTFK 417 E A A + NG+ L +++ V S + G KE++ + F E++ + K Sbjct: 149 EAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLK 208 Query: 418 DVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILH---- 585 D+ A ++ T + ++GF FV F H A + + D M G L+ Sbjct: 209 DLFG-KFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV------DEMNGKELNGKQI 261 Query: 586 ---PAINWTERESNVDA--DEMAKIR-------TAFVGNLPANANEDYLKKLFGRFGEVI 729 A ER++ + ++M + R +V NL +++ L+K F FG + Sbjct: 262 YVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTIT 321 Query: 730 RVAVSRKG--QYPVGFIHFGSRSELDNAIKEMDGKTVS 837 V +G GF+ F S E A+ EM+G+ V+ Sbjct: 322 SAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 359 Score = 67.8 bits (164), Expect = 2e-10 Identities = 81/301 (26%), Positives = 132/301 (43%), Gaps = 22/301 (7%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKR 279 A ++VG L ATE L E FS G I+ +R+ +D S G+ +V F + A A Sbjct: 11 ASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 280 QKNGVELQGKRLAV-----DLSLDQD---TLFFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N ++GK + + D SL + +F NL K + + F +++S Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTF-SAFGNILSCK 129 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWT---- 603 + D + SK G+ FV F + AA R + + M G +L+ + Sbjct: 130 VV----CDENGSK-----GYGFVHFETQEAAERAI------EKMNGMLLNDRKVFVGRFK 174 Query: 604 ---ERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAV----SRKGQYP 762 ERE+ + A + ++ N + +++ LK LFG+FG + V V S K + Sbjct: 175 SRKEREAELGA-RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-G 232 Query: 763 VGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN--KRSREEVKTR 936 GF+ F + A+ EM+GK ++G +I V A+ VE KR E++K Sbjct: 233 FGFVSFERHEDAQKAVDEMNGKELNGK------QIYVGRAQKKVERQTELKRKFEQMKQD 286 Query: 937 R 939 R Sbjct: 287 R 287 Score = 45.1 bits (105), Expect = 0.002 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDE--QDR--RVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLR 195 R + K++R+ +++ QDR R +G ++V L + LR+ FS G I + Sbjct: 265 RAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324 Query: 196 IMKDQNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 +M + G SKGFGFV F+ E A A + NG + K L V L+ Sbjct: 325 VMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 70.1 bits (170), Expect = 4e-11 Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 24/278 (8%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R+ +F+ L +S L + FS G I+ +++ D+NG SKG+GFV F + Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 148 Query: 256 ECAYIAKRQKNGVELQGKRLAVD--LSLDQDTLFFGNLCKEWS---AEEF-EELIHKTFK 417 E A A + NG+ L +++ V S + G KE++ + F E++ + K Sbjct: 149 EAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLK 208 Query: 418 DVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILH---- 585 D+ A ++ T + ++GF FV F H A + + D M G L+ Sbjct: 209 DLFG-KFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV------DEMNGKELNGKQI 261 Query: 586 ---PAINWTERESNVDA--DEMAKIR-------TAFVGNLPANANEDYLKKLFGRFGEVI 729 A ER++ + ++M + R +V NL +++ L+K F FG + Sbjct: 262 YVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTIT 321 Query: 730 RVAVSRKG--QYPVGFIHFGSRSELDNAIKEMDGKTVS 837 V +G GF+ F S E A+ EM+G+ V+ Sbjct: 322 SAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 359 Score = 66.2 bits (160), Expect = 6e-10 Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 24/303 (7%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKR 279 A ++VG L TE L E FS G I+ +R+ +D S G+ +V F + A A Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 280 QKNGVELQGKRLAV-----DLSLDQD---TLFFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N ++GK + + D SL + +F NL K + + F +++S Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTF-SAFGNILSCK 129 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWT---- 603 + D + SK G+ FV F + AA R + + M G +L+ + Sbjct: 130 VVC----DENGSK-----GYGFVHFETQEAAERAI------EKMNGMLLNDRKVFVGRFK 174 Query: 604 ---ERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAV------SRKGQ 756 ERE+ + A + ++ N + +++ LK LFG+FG + V V KG Sbjct: 175 SRKEREAELGA-RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKG- 232 Query: 757 YPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN--KRSREEVK 930 GF+ F + A+ EM+GK ++G +I V A+ VE KR E++K Sbjct: 233 --FGFVSFERHEDAQKAVDEMNGKELNGK------QIYVGRAQKKVERQTELKRKFEQMK 284 Query: 931 TRR 939 R Sbjct: 285 QDR 287 Score = 45.1 bits (105), Expect = 0.002 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDE--QDR--RVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLR 195 R + K++R+ +++ QDR R +G ++V L + LR+ FS G I + Sbjct: 265 RAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324 Query: 196 IMKDQNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 +M + G SKGFGFV F+ E A A + NG + K L V L+ Sbjct: 325 VMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 70.1 bits (170), Expect = 4e-11 Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 24/278 (8%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R+ +F+ L +S L + FS G I+ +++ D+NG SKG+GFV F + Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 148 Query: 256 ECAYIAKRQKNGVELQGKRLAVD--LSLDQDTLFFGNLCKEWS---AEEF-EELIHKTFK 417 E A A + NG+ L +++ V S + G KE++ + F E++ + K Sbjct: 149 EAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLK 208 Query: 418 DVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILH---- 585 D+ A ++ T + ++GF FV F H A + + D M G L+ Sbjct: 209 DLFG-KFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV------DEMNGKELNGKQI 261 Query: 586 ---PAINWTERESNVDA--DEMAKIR-------TAFVGNLPANANEDYLKKLFGRFGEVI 729 A ER++ + ++M + R +V NL +++ L+K F FG + Sbjct: 262 YVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTIT 321 Query: 730 RVAVSRKG--QYPVGFIHFGSRSELDNAIKEMDGKTVS 837 V +G GF+ F S E A+ EM+G+ V+ Sbjct: 322 SAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 359 Score = 66.2 bits (160), Expect = 6e-10 Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 24/303 (7%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKR 279 A ++VG L TE L E FS G I+ +R+ +D S G+ +V F + A A Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 280 QKNGVELQGKRLAV-----DLSLDQD---TLFFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N ++GK + + D SL + +F NL K + + F +++S Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTF-SAFGNILSCK 129 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWT---- 603 + D + SK G+ FV F + AA R + + M G +L+ + Sbjct: 130 VVC----DENGSK-----GYGFVHFETQEAAERAI------EKMNGMLLNDRKVFVGRFK 174 Query: 604 ---ERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAV------SRKGQ 756 ERE+ + A + ++ N + +++ LK LFG+FG + V V KG Sbjct: 175 SRKEREAELGA-RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKG- 232 Query: 757 YPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN--KRSREEVK 930 GF+ F + A+ EM+GK ++G +I V A+ VE KR E++K Sbjct: 233 --FGFVSFERHEDAQKAVDEMNGKELNGK------QIYVGRAQKKVERQTELKRKFEQMK 284 Query: 931 TRR 939 R Sbjct: 285 QDR 287 Score = 45.1 bits (105), Expect = 0.002 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDE--QDR--RVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLR 195 R + K++R+ +++ QDR R +G ++V L + LR+ FS G I + Sbjct: 265 RAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324 Query: 196 IMKDQNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 +M + G SKGFGFV F+ E A A + NG + K L V L+ Sbjct: 325 VMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 69.3 bits (168), Expect = 8e-11 Identities = 72/286 (25%), Positives = 122/286 (42%), Gaps = 32/286 (11%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R+ +F+ L +S L + FS G I+ +++ D+NG SKG+GFV F + Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 148 Query: 256 ECAYIAKRQKNGVELQGKRLAVD--------------LSLDQDTLFFGNLCKEWSAEEFE 393 E A A + NG+ L +++ V + + ++ N ++ E + Sbjct: 149 EAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLK 208 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLG 573 EL K F +SV + T + ++GF FV F H A + + D M G Sbjct: 209 ELFGK-FGPALSVKV--------MTDESGKSKGFGFVSFERHEDAQKAV------DEMNG 253 Query: 574 GILH-------PAINWTERESNVDA--DEMAKIR-------TAFVGNLPANANEDYLKKL 705 L+ A ER++ + ++M + R +V NL +++ L+K Sbjct: 254 KELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKE 313 Query: 706 FGRFGEVIRVAVSRKG--QYPVGFIHFGSRSELDNAIKEMDGKTVS 837 F FG + V +G GF+ F S E A+ EM+G+ V+ Sbjct: 314 FSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 359 Score = 67.0 bits (162), Expect = 4e-10 Identities = 80/303 (26%), Positives = 131/303 (43%), Gaps = 24/303 (7%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKR 279 A ++VG L TE L E FS G I+ +R+ +D S G+ +V F + A A Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 280 QKNGVELQGKRLAV-----DLSLDQD---TLFFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N ++GK + + D SL + +F NL K + + F +++S Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTF-SAFGNILSCK 129 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWT---- 603 + D + SK G+ FV F + AA R + + M G +L+ + Sbjct: 130 VVC----DENGSK-----GYGFVHFETQEAAERAI------EKMNGMLLNDRKVFVGRFK 174 Query: 604 ---ERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAV------SRKGQ 756 ERE+ + A + ++ N + +++ LK+LFG+FG + V V KG Sbjct: 175 SRKEREAELGA-RAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKG- 232 Query: 757 YPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN--KRSREEVK 930 GF+ F + A+ EM+GK ++G +I V A+ VE KR E++K Sbjct: 233 --FGFVSFERHEDAQKAVDEMNGKELNGK------QIYVGRAQKKVERQTELKRKFEQMK 284 Query: 931 TRR 939 R Sbjct: 285 QDR 287 Score = 45.1 bits (105), Expect = 0.002 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDE--QDR--RVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLR 195 R + K++R+ +++ QDR R +G ++V L + LR+ FS G I + Sbjct: 265 RAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324 Query: 196 IMKDQNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 +M + G SKGFGFV F+ E A A + NG + K L V L+ Sbjct: 325 VMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 68.6 bits (166), Expect = 1e-10 Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 18/272 (6%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R+ +F+ L +S L + FS G I+ +++ D+NG SKG+GFV F + Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 148 Query: 256 ECAYIAKRQKNGVELQGKRLAVD--LSLDQDTLFFGNLCKEWS---AEEF-EELIHKTFK 417 E A A + NG+ L +++ V S + G KE++ + F E++ + K Sbjct: 149 EAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLK 208 Query: 418 DVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTD-----FMLGGIL 582 + A ++ T +RGF FV F H A + + + D +G Sbjct: 209 EWFG-QYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQ 267 Query: 583 HPAINWTERESNVDADEMAKIR-----TAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR 747 TE + + + +I +V NL +++ L+K F FG + V Sbjct: 268 KKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMM 327 Query: 748 KG--QYPVGFIHFGSRSELDNAIKEMDGKTVS 837 +G GF+ F S E A+ EM+G+ V+ Sbjct: 328 EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 359 Score = 51.2 bits (121), Expect = 2e-05 Identities = 73/319 (22%), Positives = 114/319 (35%), Gaps = 34/319 (10%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 V++ + L+E F G + +++M D +G S+GFGFV F E A A N Sbjct: 193 VYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMN 252 Query: 289 GVELQGKRLAVDLSLDQDTLFFGNLCKEWSAE-----EFEELIHKTFKDVISVDLAMAPN 453 G +L GK +F G K+ + +FE++ V+L N Sbjct: 253 GKDLNGK-----------AIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNL-YVKN 300 Query: 454 LDSSTSKRRL---------------------NRGFAFVRFSSHGAAAR-VLRIGSRTDFM 567 LD RL ++GF FV FSS A + V + R Sbjct: 301 LDDGIDDERLRKEFTPFGSITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360 Query: 568 LGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR 747 + A ER++++ M ++ + V N N Y F I A +R Sbjct: 361 KPLYVALAQRKEERQAHLTNQYMQRMASVRVPNPVIN---PYQPPPSSYFMAAIPPAQNR 417 Query: 748 KGQYPVGFI-------HFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN 906 YP G I + ++ + + M G R P+F S RP + Sbjct: 418 AAYYPPGQIAQLRPSPRWTAQGARPHPFQNMAGAIRPSAPRPPTF----STMRPTSQVPR 473 Query: 907 KRSREEVKTRRSNVSGGKP 963 S + V + G +P Sbjct: 474 VMSAQRVANTSTQTMGPRP 492
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 68.6 bits (166), Expect = 1e-10 Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 27/280 (9%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R +F+ L S L E FS+ G I+ ++ D G SKG+GFV+F + Sbjct: 127 DPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKE 186 Query: 256 ECAYIAKRQKNGVELQGKRLAV-------DLSLDQDT-------LFFGNLCKEWSAEEFE 393 E A A + NG+ + K++ V + + D++T ++ NL KE +E Sbjct: 187 ESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDE-- 244 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR----IGSRTD 561 + KTF + A+ S S R F FV F AAA + I D Sbjct: 245 --LRKTFGKFGVISSAVVMRDQSGNS-----RCFGFVNFECTEAAASAVEKMNGISLGDD 297 Query: 562 FMLGGILHPAINWTE------RESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGE 723 + G E + ++ E ++ ++ NL + +++ LK++F +G Sbjct: 298 VLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGN 357 Query: 724 VI--RVAVSRKG-QYPVGFIHFGSRSELDNAIKEMDGKTV 834 V +V ++ +G GF+ + + E A+ EM+GK + Sbjct: 358 VTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMI 397 Score = 48.5 bits (114), Expect = 1e-04 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%) Frame = +1 Query: 79 EQDR-----RVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVR 243 EQ+R + +GA +++ L S + L+E+FS G + ++M + G+S+GFGFV Sbjct: 319 EQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVA 378 Query: 244 FAERECAYIAKRQKNGVELQGKRLAVDLS 330 ++ E A A + NG + K L + L+ Sbjct: 379 YSNPEEALRALSEMNGKMIGRKPLYIALA 407
>Q98SP8:EPABA_XENLA Embryonic polyadenylate-binding protein-A - Xenopus laevis (African| clawed frog) Length = 629 Score = 68.2 bits (165), Expect = 2e-10 Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 26/269 (9%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 VF+ L S L + FS G I+ +++ D++G S+G+GFV F E A A + N Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMN 159 Query: 289 GVELQGKRLAV---------DLSLDQDTLFFGNLCKEWSAEEFEEL----IHKTFKDVIS 429 G+ L +++ V +L + F N+ + E+ ++ I F + +S Sbjct: 160 GMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLS 219 Query: 430 VDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL------RIGSRTDFMLGGILHPA 591 V + M DS S RGF FV + +H A + + + R ++ G Sbjct: 220 VKVMMD---DSGRS-----RGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYV-GRAQKRI 270 Query: 592 INWTERESNVDADEMAKIR-----TAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ 756 +E + + + +I +V NL ++D L+K F +G + V +G Sbjct: 271 ERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEGG 330 Query: 757 YP--VGFIHFGSRSELDNAIKEMDGKTVS 837 + GF+ F S E A+ EM+G+ VS Sbjct: 331 HSKGFGFVCFSSPEEATKAVTEMNGRIVS 359 Score = 66.2 bits (160), Expect = 6e-10 Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 16/297 (5%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKR 279 A +++G L TE L E FS G I+ +R+ +D S + ++ F + A A Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALD 70 Query: 280 QKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVD---LAMAP 450 N ++G+ + + S L + + E + +K D S L+ Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKV 130 Query: 451 NLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWT-------ER 609 D S RG+ FV F +H AA R ++ M G +L+ + ER Sbjct: 131 VCDEHGS-----RGYGFVHFETHEAANRAIQT------MNGMLLNDRKVFVGHFKSRRER 179 Query: 610 ESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ---YPVGFIHF 780 E A M + ++ N + ++ L+++F FG + V V GF+++ Sbjct: 180 ELEYGAKVM-EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNY 238 Query: 781 GSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN--KRSREEVKTRRSN 945 G+ E A+ EM+GK V+G I V A+ +E + KR E++K R N Sbjct: 239 GNHEEAQKAVSEMNGKEVNGR------MIYVGRAQKRIERQSELKRKFEQIKQERIN 289 Score = 41.2 bits (95), Expect = 0.022 Identities = 29/84 (34%), Positives = 42/84 (50%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERE 258 E+ R +G ++V L + LR+ F G I ++M + G SKGFGFV F+ E Sbjct: 286 ERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTE-GGHSKGFGFVCFSSPE 344 Query: 259 CAYIAKRQKNGVELQGKRLAVDLS 330 A A + NG + K L V L+ Sbjct: 345 EATKAVTEMNGRIVSTKPLYVALA 368
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 67.8 bits (164), Expect = 2e-10 Identities = 79/303 (26%), Positives = 135/303 (44%), Gaps = 24/303 (7%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKR 279 A ++VG L TE L E FS G ++ +R+ +D S G+ +V F + A A Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 280 QKNGVELQGKRLAV-----DLSLDQD---TLFFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N ++GK + + D SL + +F NL K + + F +++S Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTF-SAFGNILSCK 129 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWT---- 603 + D + SK G+AFV F + AA + + + M G +L+ + Sbjct: 130 VVC----DENGSK-----GYAFVHFETQEAADKAI------EKMNGMLLNDRKVFVGRFK 174 Query: 604 ---ERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR------KGQ 756 ERE+ + A + + ++ N +++ LK+LF +FG+ + V V R KG Sbjct: 175 SRKEREAELGA-KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKG- 232 Query: 757 YPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVEN--DNKRSREEVK 930 GF+ + + + A++EM+GK +SG I V A+ VE + KR E++K Sbjct: 233 --FGFVSYEKHEDANKAVEEMNGKEISGK------IIFVGRAQKKVERQAELKRKFEQLK 284 Query: 931 TRR 939 R Sbjct: 285 QER 287 Score = 64.3 bits (155), Expect = 2e-09 Identities = 68/280 (24%), Positives = 122/280 (43%), Gaps = 27/280 (9%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R+ VF+ L +S L + FS G I+ +++ D+NG SKG+ FV F + Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQ 148 Query: 256 ECAYIAKRQKNGVELQGKRLAVD--------------LSLDQDTLFFGNLCKEWSAEEFE 393 E A A + NG+ L +++ V + + ++ N +E E + Sbjct: 149 EAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLK 208 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLG 573 EL + F +SV + PN S +GF FV + H A + + + + + G Sbjct: 209 ELFSQ-FGKTLSVKVMRDPNGKS--------KGFGFVSYEKHEDANKAVEEMNGKE-ISG 258 Query: 574 GILH--PAINWTERESNVDA--DEMAKIRTA-------FVGNLPANANEDYLKKLFGRFG 720 I+ A ER++ + +++ + R + ++ NL +++ L+K F FG Sbjct: 259 KIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFG 318 Query: 721 EV--IRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTV 834 + +V + GF+ F S E A+ EM+G+ V Sbjct: 319 SITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 358 Score = 60.5 bits (145), Expect = 4e-08 Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 32/223 (14%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 V++ + +L+E+FS G+ + +++M+D NG SKGFGFV + + E A A + N Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252 Query: 289 GVELQGKRLAVDLSLDQDTLFFGNLCK--EWSAE---EFEELIHKTFKDVISVDLAMAPN 453 G E+ GK +F G K E AE +FE+L + V+L + N Sbjct: 253 GKEISGK-----------IIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYI-KN 300 Query: 454 LDSSTSKRRL---------------------NRGFAFVRFSSHGAAARVLR------IGS 552 LD + +L ++GF FV FSS A + + +GS Sbjct: 301 LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360 Query: 553 RTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANA 681 + L+ A+ + E R A + LPANA Sbjct: 361 KP-------LYVALAQRKEERKAHLTNQYMQRVAGMRALPANA 396
>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 629 Score = 67.8 bits (164), Expect = 2e-10 Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 26/269 (9%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 VF+ L S L + FS G I+ +++ D++G S+G+GFV F +E A A + N Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMN 159 Query: 289 GVELQGKRLAV---------DLSLDQDTLFFGNLCKEWSAEEFEEL----IHKTFKDVIS 429 G+ L +++ V +L + F N+ + E+ ++ I F + +S Sbjct: 160 GMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLS 219 Query: 430 VDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL------RIGSRTDFMLGGILHPA 591 V + M D+ S RGF FV + +H A + + + R ++ G Sbjct: 220 VKVMMD---DTGRS-----RGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYV-GRAQKRI 270 Query: 592 INWTERESNVDADEMAKIR-----TAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ 756 E + + + +I +V NL ++D L+K F +G + V +G Sbjct: 271 ERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEGG 330 Query: 757 YP--VGFIHFGSRSELDNAIKEMDGKTVS 837 + GF+ F S E A+ EM+G+ VS Sbjct: 331 HSKGFGFVCFSSPEEATKAVTEMNGRIVS 359 Score = 65.5 bits (158), Expect = 1e-09 Identities = 74/297 (24%), Positives = 122/297 (41%), Gaps = 16/297 (5%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKR 279 A ++VG L TE L E FS G I+ +R+ +D S G+ ++ F + A A Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70 Query: 280 QKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVD---LAMAP 450 N ++G+ + + S L + + E + +K D S L+ Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKV 130 Query: 451 NLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWT-------ER 609 D S RG+ FV F + AA R ++ M G +L+ + ER Sbjct: 131 VCDEHGS-----RGYGFVHFETQEAANRAIQT------MNGMLLNDRKVFVGHFKSRRER 179 Query: 610 ESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKG---QYPVGFIHF 780 E A M + ++ N + ++ L+++F FG + V V GF+++ Sbjct: 180 ELEYGAKVM-EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNY 238 Query: 781 GSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN--KRSREEVKTRRSN 945 G+ E A+ EM+GK V+G I V A+ +E KR E++K R N Sbjct: 239 GNHEEAQKAVSEMNGKEVNGR------MIYVGRAQKRIERQGELKRKFEQIKQERIN 289 Score = 43.5 bits (101), Expect = 0.004 Identities = 30/84 (35%), Positives = 43/84 (51%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERE 258 E+ R +G ++V L + LR+ FS G I ++M + G SKGFGFV F+ E Sbjct: 286 ERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPE 344 Query: 259 CAYIAKRQKNGVELQGKRLAVDLS 330 A A + NG + K L V L+ Sbjct: 345 EATKAVTEMNGRIVSTKPLYVALA 368
>Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - Xenopus laevis (African| clawed frog) Length = 629 Score = 67.8 bits (164), Expect = 2e-10 Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 22/265 (8%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 VF+ L S L + FS G+I+ +++ D+ G S+G+GFV F +E A A + N Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG-SRGYGFVHFETQEAANRAIQTMN 159 Query: 289 GVELQGKRLAVD--LSLDQDTLFFGNLCKEWS---AEEF-EELIHKTFKDVISV---DLA 441 G+ L +++ V S + L +G E++ + F E++ K K++ S L+ Sbjct: 160 GMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLS 219 Query: 442 MAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL------RIGSRTDFMLGGILHPAINWT 603 + +D+S +RGF FV + +H A + + + R ++ G Sbjct: 220 VKVMMDNSGR----SRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYV-GRAQKRIERQG 274 Query: 604 ERESNVDADEMAKIR-----TAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP-- 762 E + + + +I +V NL ++D L+K F +G + V +G + Sbjct: 275 ELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEGGHSKG 334 Query: 763 VGFIHFGSRSELDNAIKEMDGKTVS 837 GF+ F S E A+ EM+G+ VS Sbjct: 335 FGFVCFSSPEEATKAVTEMNGRIVS 359 Score = 64.7 bits (156), Expect = 2e-09 Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 15/296 (5%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKR 279 A +++G L TE L E FS G I+ +R+ +D S G+ ++ F + A A Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70 Query: 280 QKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISV--DLAMAPN 453 N ++G+ + + S L + + + + +K D S D+ Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKV 130 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWT-------ERE 612 + +RG+ FV F + AA R ++ M G +L+ + ERE Sbjct: 131 VCDEYG----SRGYGFVHFETQEAANRAIQT------MNGMLLNDRKVFVGHFKSRRERE 180 Query: 613 SNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ---YPVGFIHFG 783 A M + ++ N + ++ LK++F FG + V V GF+++G Sbjct: 181 LEYGAKVM-EFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYG 239 Query: 784 SRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN--KRSREEVKTRRSN 945 + E A+ EM+GK V+G + V A+ +E KR E++K R N Sbjct: 240 NHEEAQKAVTEMNGKEVNGR------MVYVGRAQKRIERQGELKRKFEQIKQERIN 289 Score = 43.5 bits (101), Expect = 0.004 Identities = 30/84 (35%), Positives = 43/84 (51%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERE 258 E+ R +G ++V L + LR+ FS G I ++M + G SKGFGFV F+ E Sbjct: 286 ERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTE-GGHSKGFGFVCFSSPE 344 Query: 259 CAYIAKRQKNGVELQGKRLAVDLS 330 A A + NG + K L V L+ Sbjct: 345 EATKAVTEMNGRIVSTKPLYVALA 368
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 67.4 bits (163), Expect = 3e-10 Identities = 75/332 (22%), Positives = 140/332 (42%), Gaps = 28/332 (8%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R++ VF+ L + L + FS G+I+ ++ D+ G +KG+GFV F Sbjct: 159 DPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSV 218 Query: 256 ECAYIAKRQKNGVELQGKRLAVD--------------LSLDQDTLFFGNLCKEWSAEEFE 393 E A A NG+ L K++ V L + ++ NL E + +EF Sbjct: 219 ESANAAIEHVNGMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFS 278 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLG 573 +L + F ++ S+ L N RGF FV +++H A + + + ++ G Sbjct: 279 DLFGQ-FGEITSLSLVKDQN--------DKPRGFGFVNYANHECAQKAVDELNDKEYK-G 328 Query: 574 GILH--PAINWTERE-------SNVDADEMAKIR--TAFVGNLPANANEDYLKKLFGRFG 720 L+ A ERE + ++M K + F+ NL +++ LK F FG Sbjct: 329 KKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFG 388 Query: 721 EV--IRVAVSRKGQYP-VGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPA 891 + ++ +G+ GF+ + + E + A+ EM+ + ++G + + V R Sbjct: 389 TITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQRKEVRRSQ 448 Query: 892 VENDNKRSREEVKTRRSNVSGGKPDYSHGRYG 987 +E + + ++ + G P +G G Sbjct: 449 LEAQIQARNQFRLQQQVAAAAGIPAVQYGATG 480 Score = 57.4 bits (137), Expect = 3e-07 Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 13/294 (4%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKR 279 A ++VG L S TE L E+F++ G + +R+ +D S G+ +V F E A Sbjct: 80 ASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALD 139 Query: 280 QKNGVELQGKRLAVDLSLDQDTL---FFGNL-CKEWSAEEFEELIHKTFKDVISVDLAMA 447 + N ++G+ + S +L GN+ K + +H TF A Sbjct: 140 ELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFS-------AFG 192 Query: 448 PNLDSSTSKRRLN--RGFAFVRFSS-HGAAARVLRIGSRTDFMLGGILHPAINWTERESN 618 L + L +G+ FV F S A A + + + ++ ER+S Sbjct: 193 KILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRERQSK 252 Query: 619 VDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVA-VSRKGQYP--VGFIHFGSR 789 V+A + A ++ NL E LFG+FGE+ ++ V + P GF+++ + Sbjct: 253 VEALK-ANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANH 311 Query: 790 SELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDN--KRSREEVKTRRSN 945 A+ E++ K G K+ V A+ E + ++ E++K + N Sbjct: 312 ECAQKAVDELNDKEYKGK------KLYVGRAQKKHEREEELRKRYEQMKLEKMN 359 Score = 48.9 bits (115), Expect = 1e-04 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%) Frame = +1 Query: 28 REEPKMDRRAASHGDYD----EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLR 195 R + K +R Y+ E+ + +G +F+ L + L+ FS G I + Sbjct: 335 RAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAK 394 Query: 196 IMKDQNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 IM D+ G SKGFGFV + E A A + N L GK L V L+ Sbjct: 395 IMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALA 439
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 67.0 bits (162), Expect = 4e-10 Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 26/280 (9%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D R+ +F+ L +S L + FS G I+ +++ D+NG SKG+GFV F + Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 148 Query: 256 ECAYIAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAE------EFEELIHKTFK 417 E A A + NG+ L +++ V + KE AE EF + K F Sbjct: 149 EAAERAIDKMNGMLLNDRKVFVGRFKSR---------KEREAELGARAKEFTNVYIKNFG 199 Query: 418 DVISVD--------LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTD---- 561 D ++ + A ++ T ++GF FV F H A + + + D Sbjct: 200 DDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGK 259 Query: 562 -FMLGGILHPAINWTERESNVDADEMAKIR-----TAFVGNLPANANEDYLKKLFGRFGE 723 +G TE + + + +I +V NL +++ L+K F FG Sbjct: 260 SMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGT 319 Query: 724 VIRVAVSRKG--QYPVGFIHFGSRSELDNAIKEMDGKTVS 837 + V +G GF+ F S E A+ EM+G+ V+ Sbjct: 320 ITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 359 Score = 52.8 bits (125), Expect = 7e-06 Identities = 75/320 (23%), Positives = 117/320 (36%), Gaps = 35/320 (10%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 V++ + L+E+F G + +++M D NG SKGFGFV F E A A + N Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 289 GVELQGKRLAVDLSLDQDTLFFGNLCKEWSAE-----EFEELIHKTFKDVISVDLAMAPN 453 G ++ GK ++F G K+ + +FE++ V+L N Sbjct: 253 GKDMNGK-----------SMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNL-YVKN 300 Query: 454 LDSSTSKRRL---------------------NRGFAFVRFSSHGAAAR-VLRIGSRTDFM 567 LD RL ++GF FV FSS A + V + R Sbjct: 301 LDDGIDDERLRKEFLPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360 Query: 568 LGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR 747 + A ER++++ M ++ + V N N Y F I A +R Sbjct: 361 KPLYVALAQRKEERQAHLTNQYMQRMASVRVPNPVIN---PYQPPPSSYFMAAIPPAQNR 417 Query: 748 KGQYPVGFI-------HFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVEN-D 903 YP G I + ++ + + M G R P+F S RPA Sbjct: 418 AAYYPPGQIAQLRPSPRWTAQGARPHPFQNMPGAIRPTAPRPPTF----STMRPASNQVP 473 Query: 904 NKRSREEVKTRRSNVSGGKP 963 S + V + G +P Sbjct: 474 RVMSAQRVANTSTQTMGPRP 493
>O97018:SXL_CHRRU Sex-lethal homolog - Chrysomya rufifacies (Hairy maggot blowfly)| Length = 307 Score = 64.7 bits (156), Expect = 2e-09 Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 8/176 (4%) Frame = +1 Query: 37 PKMDRRAASHGDYDEQDRR-VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-Q 210 P + + + G D D + G + V LP+ T+ L +F TCG I RIMKD + Sbjct: 62 PAISTNSVNSGGGDCGDNQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYK 121 Query: 211 NGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDL------SLDQDTLFFGNLCKE 372 G S G+ FV FA A A + NGV ++ KRL V S+ L+ NL + Sbjct: 122 TGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYARPGGESIKDTNLYVTNLPRT 181 Query: 373 WSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 + +E E++ K + +++ ++ D T K RG AFVRF+ A + Sbjct: 182 ITDDELEKIFGK-YGNIVQKNILR----DKLTGK---PRGVAFVRFNKREEAQEAI 229 Score = 39.3 bits (90), Expect = 0.084 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%) Frame = +1 Query: 631 EMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRK----GQYPVGFIHFGSRSEL 798 E K +V NLP +D L+K+FG++G +++ + R V F+ F R E Sbjct: 166 ESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEA 225 Query: 799 DNAIKEMDGKTVSGPNR 849 AI ++ G ++ Sbjct: 226 QEAISALNNVIPEGASQ 242
>Q6DCB7:DND1_XENLA Dead end protein homolog 1 - Xenopus laevis (African clawed frog)| Length = 371 Score = 63.9 bits (154), Expect = 3e-09 Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 1/174 (0%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIA 273 V G+EVF+G +P+ E L +F + G++ + R+M +G+++GF + R+ R A A Sbjct: 74 VSGSEVFIGKIPQDIYEDKLIPLFQSVGKLYEFRLMMTFSGLNRGFAYARYISRRQAISA 133 Query: 274 KRQKNGVEL-QGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAP 450 NG E+ +G + V S ++ L L + + ++ + V S+ L +P Sbjct: 134 IMSLNGFEITKGCCIVVCRSTEKSELALDGLPGNFDENMLKNVLDEVTSGVSSISLHPSP 193 Query: 451 NLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERE 612 +S A V++ SH AAA + +L G L +NW + + Sbjct: 194 TKESQV--------LAVVKYDSHRAAAMAKKTLCEGSPILPG-LPLTVNWLKTD 238
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 63.2 bits (152), Expect = 5e-09 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYI 270 V G + V LP+ T+ L +F TCG I RIMKD + G S G+ FV FA A Sbjct: 99 VNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQN 158 Query: 271 AKRQKNGVELQGKRLAVDL------SLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISV 432 A + NG+ ++ KRL V S+ L+ NL + + +E E++ K + +++ Sbjct: 159 AIKTVNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGK-YGNIVQK 217 Query: 433 DLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 ++ D T + RG AFVRF+ A + Sbjct: 218 NILR----DKLTGR---PRGVAFVRFNKREEAQEAI 246 Score = 39.3 bits (90), Expect = 0.084 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%) Frame = +1 Query: 631 EMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRK----GQYPVGFIHFGSRSEL 798 E K +V NLP +D L+K+FG++G +++ + R V F+ F R E Sbjct: 183 ESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEA 242 Query: 799 DNAIKEMDGKTVSGPNR 849 AI ++ G ++ Sbjct: 243 QEAISALNNVIPEGASQ 259
>Q8C7E9:CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant - Mus| musculus (Mouse) Length = 632 Score = 62.8 bits (151), Expect = 7e-09 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 VFVG +P ATE L++IFS G +V R++ D + G KG+GF + ++E A A R Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 286 NGVELQGKRLAVD 324 NG E G+ L VD Sbjct: 78 NGREFSGRALRVD 90 Score = 40.8 bits (94), Expect = 0.029 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Frame = +1 Query: 643 IRTAFVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VGFIHFGSRSELDNAI 810 +R+ FVGN+P A E+ LK +F G V+ R+ R+ P GF + + +A+ Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74 Query: 811 KEMDGKTVSG 840 + ++G+ SG Sbjct: 75 RNLNGREFSG 84
>Q9H0L4:CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit, tau variant - Homo| sapiens (Human) Length = 616 Score = 62.8 bits (151), Expect = 7e-09 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 VFVG +P ATE L++IFS G +V R++ D + G KG+GF + ++E A A R Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 286 NGVELQGKRLAVD 324 NG E G+ L VD Sbjct: 78 NGREFSGRALRVD 90 Score = 40.8 bits (94), Expect = 0.029 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Frame = +1 Query: 643 IRTAFVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VGFIHFGSRSELDNAI 810 +R+ FVGN+P A E+ LK +F G V+ R+ R+ P GF + + +A+ Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74 Query: 811 KEMDGKTVSG 840 + ++G+ SG Sbjct: 75 RNLNGREFSG 84
>Q5RDA3:CSTF2_PONPY Cleavage stimulation factor 64 kDa subunit - Pongo pygmaeus| (Orangutan) Length = 577 Score = 62.4 bits (150), Expect = 9e-09 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 VFVG +P ATE L++IFS G +V R++ D + G KG+GF + ++E A A R Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 286 NGVELQGKRLAVD 324 NG E G+ L VD Sbjct: 78 NGREFSGRALRVD 90 Score = 40.8 bits (94), Expect = 0.029 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Frame = +1 Query: 601 TERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VG 768 T R+ VD +R+ FVGN+P A E+ LK +F G V+ R+ R+ P G Sbjct: 5 TVRDPAVDRS----LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG 60 Query: 769 FIHFGSRSELDNAIKEMDGKTVSG 840 F + + +A++ ++G+ SG Sbjct: 61 FCEYQDQETALSAMRNLNGREFSG 84
>Q8BIQ5:CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit - Mus musculus (Mouse)| Length = 580 Score = 62.4 bits (150), Expect = 9e-09 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 VFVG +P ATE L++IFS G +V R++ D + G KG+GF + ++E A A R Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 286 NGVELQGKRLAVD 324 NG E G+ L VD Sbjct: 78 NGREFSGRALRVD 90 Score = 40.4 bits (93), Expect = 0.038 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Frame = +1 Query: 643 IRTAFVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VGFIHFGSRSELDNAI 810 +R+ FVGN+P A E+ LK +F G V+ R+ R+ P GF + + +A+ Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74 Query: 811 KEMDGKTVSG 840 + ++G+ SG Sbjct: 75 RNLNGREFSG 84
>P33240:CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit - Homo sapiens (Human)| Length = 577 Score = 62.4 bits (150), Expect = 9e-09 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 VFVG +P ATE L++IFS G +V R++ D + G KG+GF + ++E A A R Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 286 NGVELQGKRLAVD 324 NG E G+ L VD Sbjct: 78 NGREFSGRALRVD 90 Score = 40.8 bits (94), Expect = 0.029 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Frame = +1 Query: 601 TERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VG 768 T R+ VD +R+ FVGN+P A E+ LK +F G V+ R+ R+ P G Sbjct: 5 TVRDPAVDRS----LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG 60 Query: 769 FIHFGSRSELDNAIKEMDGKTVSG 840 F + + +A++ ++G+ SG Sbjct: 61 FCEYQDQETALSAMRNLNGREFSG 84
>Q8HXM1:CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit - Bos taurus (Bovine)| Length = 572 Score = 62.4 bits (150), Expect = 9e-09 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 VFVG +P ATE L++IFS G +V R++ D + G KG+GF + ++E A A R Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 286 NGVELQGKRLAVD 324 NG E G+ L VD Sbjct: 78 NGREFSGRALRVD 90 Score = 40.8 bits (94), Expect = 0.029 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Frame = +1 Query: 601 TERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VG 768 T R+ VD +R+ FVGN+P A E+ LK +F G V+ R+ R+ P G Sbjct: 5 TVRDPAVDRS----LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG 60 Query: 769 FIHFGSRSELDNAIKEMDGKTVSG 840 F + + +A++ ++G+ SG Sbjct: 61 FCEYQDQETALSAMRNLNGREFSG 84
>Q99383:HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 534 Score = 62.0 bits (149), Expect = 1e-08 Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 7/176 (3%) Frame = +1 Query: 31 EEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD- 207 + P + + + + D + ++F+GGL TE LRE F G + DL+IMKD Sbjct: 135 QSPPQQQVTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDP 194 Query: 208 QNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQD------TLFFGNLCK 369 G S+GFGF+ F + + + + K L GK + ++ +D +F G + Sbjct: 195 ATGRSRGFGFLSF--EKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGP 252 Query: 370 EWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARV 537 + +EFEE + + +I L LD T + +RGF FV + S A RV Sbjct: 253 DVRPKEFEEFFSQ-WGTIIDAQLM----LDKDTGQ---SRGFGFVTYDSADAVDRV 300 Score = 34.7 bits (78), Expect = 2.1 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%) Frame = +1 Query: 607 RESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRK----GQYPVGFI 774 +E AD + F+G L + ED L++ FG++G V + + + GF+ Sbjct: 146 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 205 Query: 775 HFGSRSELDNAIKE---MDGKTV 834 F S +D +K +DGK + Sbjct: 206 SFEKPSSVDEVVKTQHILDGKVI 228
>Q8CH84:ELAV2_RAT ELAV-like protein 2 - Rattus norvegicus (Rat)| Length = 359 Score = 62.0 bits (149), Expect = 1e-08 Identities = 78/278 (28%), Positives = 115/278 (41%), Gaps = 21/278 (7%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYI 270 ++ A ++V GLP++ T+ L ++FS G I+ RI+ DQ G+S+G GF+RF +R A Sbjct: 122 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEE 181 Query: 271 AKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAP 450 A + NG + G + + T+ F N + KT + ++S L +P Sbjct: 182 AIKGLNGQKPPG-------ATEPITVKFANNPSQ-----------KTNQAILS-QLYQSP 222 Query: 451 N------LDSSTSKRR----LNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGIL---HPA 591 N L + R LN + RFS + I T L GI HP Sbjct: 223 NRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSP-------MTIDGMTS--LAGINIPGHPG 273 Query: 592 INWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------K 750 W FV NL +A+E L ++FG FG V V V R K Sbjct: 274 TGW----------------CIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCK 317 Query: 751 GQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 G GF+ + E AI ++G + SFK Sbjct: 318 G---FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFK 352 Score = 52.8 bits (125), Expect = 7e-06 Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 7/147 (4%) Frame = +1 Query: 124 LPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQKNGVEL 300 LP++ T+ L+ +F + GEI ++++D+ G S G+GFV + + + A A NG+ L Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL 105 Query: 301 QGKRLAV------DLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDS 462 Q K + V S+ L+ L K + +E E+L + + + S L +D Sbjct: 106 QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL-----VDQ 160 Query: 463 STSKRRLNRGFAFVRFSSHGAAARVLR 543 T ++RG F+RF A ++ Sbjct: 161 VTG---ISRGVGFIRFDKRIEAEEAIK 184 Score = 39.3 bits (90), Expect = 0.084 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 14/106 (13%) Frame = +1 Query: 637 AKIRTA--FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VGFIHFGSRSEL 798 A IR A +V LP + L++LF ++G +I R+ V + VGFI F R E Sbjct: 120 ASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEA 179 Query: 799 DNAIKEMDGKTVSGPN--------RGPSFKIQVSVARPAVENDNKR 912 + AIK ++G+ G PS K ++ ++ N+R Sbjct: 180 EEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225 Score = 37.4 bits (85), Expect = 0.32 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 +FV L A E L ++F G + ++++++D N KGFGFV + A +A Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 286 NGVELQGKRLAVDLSLDQ 339 NG L + L V ++ Sbjct: 338 NGYRLGDRVLQVSFKTNK 355 Score = 35.4 bits (80), Expect = 1.2 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 5/98 (5%) Frame = +1 Query: 613 SNVDADEMAKIRTAFVGN-LPANANEDYLKKLFGRFGEVIRVAVSR---KGQ-YPVGFIH 777 S VD+ +T + N LP N ++ LK LFG GE+ + R GQ GF++ Sbjct: 27 SPVDSGNTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVN 86 Query: 778 FGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPA 891 + + + AI ++G R + I+VS ARP+ Sbjct: 87 YIDPKDAEKAINTLNGL------RLQTKTIKVSYARPS 118
>Q5R9Z6:ELAV2_PONPY ELAV-like protein 2 - Pongo pygmaeus (Orangutan)| Length = 359 Score = 62.0 bits (149), Expect = 1e-08 Identities = 78/278 (28%), Positives = 115/278 (41%), Gaps = 21/278 (7%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYI 270 ++ A ++V GLP++ T+ L ++FS G I+ RI+ DQ G+S+G GF+RF +R A Sbjct: 122 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEE 181 Query: 271 AKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAP 450 A + NG + G + + T+ F N + KT + ++S L +P Sbjct: 182 AIKGLNGQKPPG-------ATEPITVKFANNPSQ-----------KTNQAILS-QLYQSP 222 Query: 451 N------LDSSTSKRR----LNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGIL---HPA 591 N L + R LN + RFS + I T L GI HP Sbjct: 223 NRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSP-------MTIDGMTS--LAGINIPGHPG 273 Query: 592 INWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------K 750 W FV NL +A+E L ++FG FG V V V R K Sbjct: 274 TGW----------------CIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCK 317 Query: 751 GQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 G GF+ + E AI ++G + SFK Sbjct: 318 G---FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFK 352 Score = 53.5 bits (127), Expect = 4e-06 Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 + V LP++ T+ L+ +F + GEI ++++D+ G S G+GFV + + + A A Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 286 NGVELQGKRLAV------DLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 NG+ LQ K + V S+ L+ L K + +E E+L + + + S L Sbjct: 101 NGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL--- 157 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR 543 +D T ++RG F+RF A ++ Sbjct: 158 --VDQVTG---ISRGVGFIRFDKRIEAEEAIK 184 Score = 39.3 bits (90), Expect = 0.084 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 14/106 (13%) Frame = +1 Query: 637 AKIRTA--FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VGFIHFGSRSEL 798 A IR A +V LP + L++LF ++G +I R+ V + VGFI F R E Sbjct: 120 ASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEA 179 Query: 799 DNAIKEMDGKTVSGPN--------RGPSFKIQVSVARPAVENDNKR 912 + AIK ++G+ G PS K ++ ++ N+R Sbjct: 180 EEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225 Score = 37.4 bits (85), Expect = 0.32 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 +FV L A E L ++F G + ++++++D N KGFGFV + A +A Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 286 NGVELQGKRLAVDLSLDQ 339 NG L + L V ++ Sbjct: 338 NGYRLGDRVLQVSFKTNK 355 Score = 34.7 bits (78), Expect = 2.1 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 5/98 (5%) Frame = +1 Query: 613 SNVDADEMAKIRTAFVGN-LPANANEDYLKKLFGRFGEVIRVAVSR---KGQ-YPVGFIH 777 S VD+ +T + N LP N ++ LK LFG GE+ + R GQ GF++ Sbjct: 27 SPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVN 86 Query: 778 FGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPA 891 + + + AI ++G R + I+VS ARP+ Sbjct: 87 YIDPKDAEKAINTLNGL------RLQTKTIKVSYARPS 118
>Q12926:ELAV2_HUMAN ELAV-like protein 2 - Homo sapiens (Human)| Length = 359 Score = 62.0 bits (149), Expect = 1e-08 Identities = 78/278 (28%), Positives = 115/278 (41%), Gaps = 21/278 (7%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYI 270 ++ A ++V GLP++ T+ L ++FS G I+ RI+ DQ G+S+G GF+RF +R A Sbjct: 122 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEE 181 Query: 271 AKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAP 450 A + NG + G + + T+ F N + KT + ++S L +P Sbjct: 182 AIKGLNGQKPPG-------ATEPITVKFANNPSQ-----------KTNQAILS-QLYQSP 222 Query: 451 N------LDSSTSKRR----LNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGIL---HPA 591 N L + R LN + RFS + I T L GI HP Sbjct: 223 NRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSP-------MTIDGMTS--LAGINIPGHPG 273 Query: 592 INWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------K 750 W FV NL +A+E L ++FG FG V V V R K Sbjct: 274 TGW----------------CIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCK 317 Query: 751 GQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 G GF+ + E AI ++G + SFK Sbjct: 318 G---FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFK 352 Score = 53.5 bits (127), Expect = 4e-06 Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 + V LP++ T+ L+ +F + GEI ++++D+ G S G+GFV + + + A A Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 286 NGVELQGKRLAV------DLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 NG+ LQ K + V S+ L+ L K + +E E+L + + + S L Sbjct: 101 NGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL--- 157 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR 543 +D T ++RG F+RF A ++ Sbjct: 158 --VDQVTG---ISRGVGFIRFDKRIEAEEAIK 184 Score = 39.3 bits (90), Expect = 0.084 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 14/106 (13%) Frame = +1 Query: 637 AKIRTA--FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VGFIHFGSRSEL 798 A IR A +V LP + L++LF ++G +I R+ V + VGFI F R E Sbjct: 120 ASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEA 179 Query: 799 DNAIKEMDGKTVSGPN--------RGPSFKIQVSVARPAVENDNKR 912 + AIK ++G+ G PS K ++ ++ N+R Sbjct: 180 EEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225 Score = 37.4 bits (85), Expect = 0.32 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 +FV L A E L ++F G + ++++++D N KGFGFV + A +A Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 286 NGVELQGKRLAVDLSLDQ 339 NG L + L V ++ Sbjct: 338 NGYRLGDRVLQVSFKTNK 355 Score = 34.7 bits (78), Expect = 2.1 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 5/98 (5%) Frame = +1 Query: 613 SNVDADEMAKIRTAFVGN-LPANANEDYLKKLFGRFGEVIRVAVSR---KGQ-YPVGFIH 777 S VD+ +T + N LP N ++ LK LFG GE+ + R GQ GF++ Sbjct: 27 SPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVN 86 Query: 778 FGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPA 891 + + + AI ++G R + I+VS ARP+ Sbjct: 87 YIDPKDAEKAINTLNGL------RLQTKTIKVSYARPS 118
>Q99729:ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B - Homo sapiens (Human)| Length = 331 Score = 61.2 bits (147), Expect = 2e-08 Identities = 50/185 (27%), Positives = 75/185 (40%), Gaps = 5/185 (2%) Frame = +1 Query: 1 GCACRLG*RREEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGE 180 G A L R P+ R A + ++FVGGL ++ L++ F+ GE Sbjct: 34 GAAAGLEARPPRPRAGIRTAPRDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGE 93 Query: 181 IVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK----NGVELQGKRLAVDLSLDQDT 345 +VD I D N G S+GFGF+ F + QK +G + K+ Sbjct: 94 VVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKK 153 Query: 346 LFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGA 525 +F G L E EE F ++ +++L M P L+ RGF F+ F Sbjct: 154 IFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNK-------RRGFVFITFKEEEP 206 Query: 526 AARVL 540 +VL Sbjct: 207 VKKVL 211 Score = 49.3 bits (116), Expect = 8e-05 Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 4/222 (1%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G L + S ++ ++ K F +V+ + M PN S RGF F+ F Sbjct: 66 DAGKMFVGGLSWDTSKKDLKDYFTK-FGEVVDCTIKMDPNTGRS-------RGFGFILFK 117 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNL-PANANED 690 + +VL + + G ++ P ++ + D + KI FVG L P + E+ Sbjct: 118 DAASVEKVL--DQKEHRLDGRVIDP-----KKAMAMKKDPVKKI---FVGGLNPESPTEE 167 Query: 691 YLKKLFGRFGEV--IRVAVSRKGQYPVGFIHFGSRSELD-NAIKEMDGKTVSGPNRGPSF 861 +++ FG FGE+ I + + K GF+ + E + E TVSG Sbjct: 168 KIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGS------ 221 Query: 862 KIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGRYG 987 K ++ VA+P +EV ++ SGG+ + + G G Sbjct: 222 KCEIKVAQP----------KEVYQQQQYGSGGRGNRNRGNRG 253
>Q60668:HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 - Mus musculus (Mouse)| Length = 355 Score = 61.2 bits (147), Expect = 2e-08 Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 6/151 (3%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQ 282 ++F+GGL T+ L++ FS GE+VD + D G S+GFGFV F E E Q Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157 Query: 283 K----NGVELQGKRL-AVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 K NG + KR A+ +F G L + E+ E F +V S++L M Sbjct: 158 KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYF-GGFGEVESIELPM- 215 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 D+ T+KR RGF F+ F +++ Sbjct: 216 ---DNKTNKR---RGFCFITFKEEEPVKKIM 240 Score = 36.6 bits (83), Expect = 0.55 Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 15/232 (6%) Frame = +1 Query: 346 LFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGA 525 +F G L + + ++ ++ K F +V+ L + P S RGF FV F + Sbjct: 99 MFIGGLSWDTTKKDLKDYFSK-FGEVVDCTLKLDPITGRS-------RGFGFVLFKESES 150 Query: 526 AARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKL 705 +V+ + + G ++ P +R + E ++ FVG L + E+ +++ Sbjct: 151 VDKVM--DQKEHKLNGKVIDP-----KRAKAMKTKE--PVKKIFVGGLSPDTPEEKIREY 201 Query: 706 FGRFGEV--IRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPS-FKIQVS 876 FG FGEV I + + K GF + E +K++ K N G S +I+V+ Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEE--EPVKKIMEKKYH--NVGLSKCEIKVA 257 Query: 877 VARPAVENDNKRSREEVKTRRSNVSGGKP------------DYSHGRYGHDS 996 +++ + + R+ GG P + +G YG++S Sbjct: 258 MSKEQYQQQQQWGSRGGFAGRARGRGGGPSQNWNQGYSNYWNQGYGNYGYNS 309
>Q14103:HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 - Homo sapiens (Human)| Length = 355 Score = 61.2 bits (147), Expect = 2e-08 Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 6/151 (3%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQ 282 ++F+GGL T+ L++ FS GE+VD + D G S+GFGFV F E E Q Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157 Query: 283 K----NGVELQGKRL-AVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 K NG + KR A+ +F G L + E+ E F +V S++L M Sbjct: 158 KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYF-GGFGEVESIELPM- 215 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 D+ T+KR RGF F+ F +++ Sbjct: 216 ---DNKTNKR---RGFCFITFKEEEPVKKIM 240 Score = 36.6 bits (83), Expect = 0.55 Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 15/232 (6%) Frame = +1 Query: 346 LFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGA 525 +F G L + + ++ ++ K F +V+ L + P S RGF FV F + Sbjct: 99 MFIGGLSWDTTKKDLKDYFSK-FGEVVDCTLKLDPITGRS-------RGFGFVLFKESES 150 Query: 526 AARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKL 705 +V+ + + G ++ P +R + E ++ FVG L + E+ +++ Sbjct: 151 VDKVM--DQKEHKLNGKVIDP-----KRAKAMKTKE--PVKKIFVGGLSPDTPEEKIREY 201 Query: 706 FGRFGEV--IRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPS-FKIQVS 876 FG FGEV I + + K GF + E +K++ K N G S +I+V+ Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEE--EPVKKIMEKKYH--NVGLSKCEIKVA 257 Query: 877 VARPAVENDNKRSREEVKTRRSNVSGGKP------------DYSHGRYGHDS 996 +++ + + R+ GG P + +G YG++S Sbjct: 258 MSKEQYQQQQQWGSRGGFAGRARGRGGGPSQNWNQGYSNYWNQGYGNYGYNS 309
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 60.5 bits (145), Expect = 4e-08 Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 10/160 (6%) Frame = +1 Query: 91 RVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAY 267 R + A ++VGGL +E L E+ G +V + + KD+ +GFGFV F E A Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68 Query: 268 IAKRQKNGVELQGKRLAVDLSLDQD-------TLFFGNLCKEWSAEEFEELIHKTFK--D 420 A + N ++L GK + V+ + + +F GNL E E+L++ TF Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNL----DPEVDEKLLYDTFSAFG 124 Query: 421 VISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 VI + ++DS TSK GFAF+ F+S A+ L Sbjct: 125 VILQVPKIMRDVDSGTSK-----GFAFINFASFEASDTAL 159 Score = 48.9 bits (115), Expect = 1e-04 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 2/84 (2%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDL-RIMKD-QNGVSKGFGFVRFAERECAYIA 273 GA +FVG L E L + FS G I+ + +IM+D +G SKGF F+ FA E + A Sbjct: 99 GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 158 Query: 274 KRQKNGVELQGKRLAVDLSLDQDT 345 NG L + + V + +D+ Sbjct: 159 LEAMNGQFLCNRAITVSYAFKRDS 182
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 60.5 bits (145), Expect = 4e-08 Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 31/284 (10%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D++ R+ +F+ L +S L +FS G I+ +++ D NG SKG+ +V F Sbjct: 97 DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSL 155 Query: 256 ECAYIAKRQKNGVELQGKRL-----------AVDLSLDQDTLFFGNLCKEWSAEEFEELI 402 A A NGV L +++ A ++ F K + +E + Sbjct: 156 AAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKL 215 Query: 403 HKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAAR-VLRIGSRTDFMLGGI 579 + F + + S SK GF FVR+ +H AA + VL + ++ + G + Sbjct: 216 KELFCEYGPTESVKVIRDASGKSK-----GFGFVRYETHEAAQKAVLDLHGKS--IDGKV 268 Query: 580 LHPAINWTERESNVDADEMAKIRTAF-----------------VGNLPANANEDYLKKLF 708 L+ + + +A++R F + NL N++ LK+ F Sbjct: 269 LYVG------RAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEF 322 Query: 709 GRFGEVIRVAVSRKGQYPVGF--IHFGSRSELDNAIKEMDGKTV 834 FG + R V + GF + F S E A+ EM+G+ V Sbjct: 323 SSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRVV 366 Score = 54.7 bits (130), Expect = 2e-06 Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 20/309 (6%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSK-GFGFVRFAERECAYIAKR 279 A ++VG L TE L + F G + RI +D S G+G+V F A A Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 280 QKNGVELQGKRLAVDLSLDQDTL--------FFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N + GK + S D L F NL K L F +++S Sbjct: 78 TMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGNILSCK 136 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL------RIGSRTDFMLGGILHPAIN 597 + D + SK G+A+V F S AA R + R+ +R ++ G P Sbjct: 137 VVC----DDNGSK-----GYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV-GRFKFPE-- 184 Query: 598 WTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP---VG 768 ER + V + A FV N+ + +++ LK+LF +G V V R G Sbjct: 185 --ERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFG 242 Query: 769 FIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVEN--DNKRSREEVKTRRS 942 F+ + + A+ ++ GK++ G + V A+ +E + +R E ++ + Sbjct: 243 FVRYETHEAAQKAVLDLHGKSIDGK------VLYVGRAQKKIERLAELRRRFERLRLKEK 296 Query: 943 NVSGGKPDY 969 + G P Y Sbjct: 297 SRPPGVPIY 305
>Q60899:ELAV2_MOUSE ELAV-like protein 2 - Mus musculus (Mouse)| Length = 360 Score = 60.5 bits (145), Expect = 4e-08 Identities = 74/274 (27%), Positives = 115/274 (41%), Gaps = 17/274 (6%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYI 270 ++ A ++V GLP++ T+ L ++FS G I+ RI+ DQ G+S+G GF+RF +R A Sbjct: 122 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEE 181 Query: 271 AKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAP 450 A + NG + G + + T+ F N + KT + ++S L +P Sbjct: 182 AIKGLNGQKPPG-------ATEPITVKFANNPSQ-----------KTNQAILS-QLYQSP 222 Query: 451 N------LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGIL---HPAINWT 603 N L + RL+ + ++G +R + L GI HP W Sbjct: 223 NRRYPGPLAQQAQRFRLDN----LLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGW- 277 Query: 604 ERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------KGQYP 762 FV NL +A+E L ++FG FG V V V R KG Sbjct: 278 ---------------CIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKG--- 319 Query: 763 VGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 GF+ + E AI ++G + SFK Sbjct: 320 FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFK 353 Score = 39.3 bits (90), Expect = 0.084 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 14/106 (13%) Frame = +1 Query: 637 AKIRTA--FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VGFIHFGSRSEL 798 A IR A +V LP + L++LF ++G +I R+ V + VGFI F R E Sbjct: 120 ASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEA 179 Query: 799 DNAIKEMDGKTVSGPN--------RGPSFKIQVSVARPAVENDNKR 912 + AIK ++G+ G PS K ++ ++ N+R Sbjct: 180 EEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225 Score = 37.4 bits (85), Expect = 0.32 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 +FV L A E L ++F G + ++++++D N KGFGFV + A +A Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338 Query: 286 NGVELQGKRLAVDLSLDQ 339 NG L + L V ++ Sbjct: 339 NGYRLGDRVLQVSFKTNK 356 Score = 34.7 bits (78), Expect = 2.1 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 5/98 (5%) Frame = +1 Query: 613 SNVDADEMAKIRTAFVGN-LPANANEDYLKKLFGRFGEVIRVAVSR---KGQ-YPVGFIH 777 S VD+ +T + N LP N ++ LK LFG GE+ + R GQ GF++ Sbjct: 27 SPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVN 86 Query: 778 FGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPA 891 + + + AI ++G R + I+VS ARP+ Sbjct: 87 YIDPKDAEKAINTLNGL------RLQTKTIKVSYARPS 118
>Q921F2:TADBP_MOUSE TAR DNA-binding protein 43 - Mus musculus (Mouse)| Length = 414 Score = 60.1 bits (144), Expect = 5e-08 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 8/152 (5%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 K +++ V GLP TE L++ FST GE++ +++ KD + G SKGFGFVRF E E Sbjct: 102 KTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161 Query: 274 KRQKNGVE-------LQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISV 432 Q++ ++ L + + D L +F G ++ +AEE ++ + + +V+ V Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTAEELQQFFCQ-YGEVVDV 220 Query: 433 DLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAA 528 + + R FAFV F+ A Sbjct: 221 FIP------------KPFRAFAFVTFADDKVA 240 Score = 33.5 bits (75), Expect = 4.6 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 3/91 (3%) Frame = +1 Query: 484 NRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERE---SNVDADEMAKIRTA 654 ++GF FVRF+ + +V+ M+ G W + + S DE + R Sbjct: 144 SKGFGFVRFTEYETQVKVMS----QRHMIDG------RWCDCKLPNSKQSPDEPLRSRKV 193 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSR 747 FVG + + L++ F ++GEV+ V + + Sbjct: 194 FVGRCTEDMTAEELQQFFCQYGEVVDVFIPK 224 Score = 33.1 bits (74), Expect = 6.0 Identities = 20/60 (33%), Positives = 30/60 (50%) Frame = +1 Query: 85 DRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECA 264 D ++ +VFVG T L++ F GE+VD+ I K + F FV FA+ + A Sbjct: 185 DEPLRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKP----FRAFAFVTFADDKVA 240
>Q22037:ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 - Caenorhabditis elegans| Length = 346 Score = 60.1 bits (144), Expect = 5e-08 Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 20/151 (13%) Frame = +1 Query: 631 EMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR----KGQYPVGFIHFGSRSEL 798 E +R FVG L +N +D +++ + +FGE+ + V R K GF+ F ++E+ Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77 Query: 799 DNAIKE----MDGKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPD 966 D A+K+ +DGKTV P +D RS V T+R VSG + D Sbjct: 78 DAAMKQRPHIIDGKTVDPKRAVP-------------RDDKNRSESNVSTKRLYVSGVRED 124 Query: 967 YSHG-------RYGHDS-----LDRQTKAPR 1023 ++ +YG + LD+ T+ PR Sbjct: 125 HTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155 Score = 51.6 bits (122), Expect = 2e-05 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 13/151 (8%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGV-SKGFGFVRFAERECAYIAKRQ 282 ++FVGGL + T+ +RE +S GEI D+ +M+D S+GFGFV F+ + A +Q Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83 Query: 283 KNGVELQGKRLAVDLSLDQD------------TLFFGNLCKEWSAEEFEELIHKTFKDVI 426 + + + GK + ++ +D L+ + ++ + + E K + V Sbjct: 84 RPHI-IDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTK-YGTVT 141 Query: 427 SVDLAMAPNLDSSTSKRRLNRGFAFVRFSSH 519 ++ LD +T K RGF FV F H Sbjct: 142 KSEII----LDKATQK---PRGFGFVTFDDH 165
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 60.1 bits (144), Expect = 5e-08 Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 31/284 (10%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D++ R+ +F+ L +S L +FS G I+ +++ D NG SKG+ +V F Sbjct: 97 DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSL 155 Query: 256 ECAYIAKRQKNGVELQGKRL-----------AVDLSLDQDTLFFGNLCKEWSAEEFEELI 402 A A NGV L +++ A ++ F K + +E + Sbjct: 156 AAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKL 215 Query: 403 HKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAAR-VLRIGSRTDFMLGGI 579 + F + + S SK GF FVR+ +H AA + VL + ++ + G + Sbjct: 216 KELFCEYGPTESVKVIRDASGKSK-----GFGFVRYETHEAAQKAVLDLHGKS--IDGKV 268 Query: 580 LHPAINWTERESNVDADEMAKIRTAF-----------------VGNLPANANEDYLKKLF 708 L+ + + +A++R F + NL N++ LK+ F Sbjct: 269 LYVG------RAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEF 322 Query: 709 GRFGEVIRVAVSRKGQYPVGF--IHFGSRSELDNAIKEMDGKTV 834 FG + R V + GF + F S E A+ EM+G+ V Sbjct: 323 SSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIV 366 Score = 54.7 bits (130), Expect = 2e-06 Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 20/309 (6%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSK-GFGFVRFAERECAYIAKR 279 A ++VG L TE L + F G + RI +D S G+G+V F A A Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 280 QKNGVELQGKRLAVDLSLDQDTL--------FFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N + GK + S D L F NL K L F +++S Sbjct: 78 TMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGNILSCK 136 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL------RIGSRTDFMLGGILHPAIN 597 + D + SK G+A+V F S AA R + R+ +R ++ G P Sbjct: 137 VVC----DDNGSK-----GYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV-GRFKFPE-- 184 Query: 598 WTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP---VG 768 ER + V + A FV N+ + +++ LK+LF +G V V R G Sbjct: 185 --ERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFG 242 Query: 769 FIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVEN--DNKRSREEVKTRRS 942 F+ + + A+ ++ GK++ G + V A+ +E + +R E ++ + Sbjct: 243 FVRYETHEAAQKAVLDLHGKSIDGK------VLYVGRAQKKIERLAELRRRFERLRLKEK 296 Query: 943 NVSGGKPDY 969 + G P Y Sbjct: 297 SRPPGVPIY 305
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 60.1 bits (144), Expect = 5e-08 Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 31/284 (10%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D++ R+ +F+ L +S L +FS G I+ +++ D NG SKG+ +V F Sbjct: 97 DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSL 155 Query: 256 ECAYIAKRQKNGVELQGKRL-----------AVDLSLDQDTLFFGNLCKEWSAEEFEELI 402 A A NGV L +++ A ++ F K + +E + Sbjct: 156 AAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKL 215 Query: 403 HKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAAR-VLRIGSRTDFMLGGI 579 + F + + S SK GF FVR+ +H AA + VL + ++ + G + Sbjct: 216 KELFCEYGPTESVKVIRDASGKSK-----GFGFVRYETHEAAQKAVLDLHGKS--IDGKV 268 Query: 580 LHPAINWTERESNVDADEMAKIRTAF-----------------VGNLPANANEDYLKKLF 708 L+ + + +A++R F + NL N++ LK+ F Sbjct: 269 LYVG------RAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEF 322 Query: 709 GRFGEVIRVAVSRKGQYPVGF--IHFGSRSELDNAIKEMDGKTV 834 FG + R V + GF + F S E A+ EM+G+ V Sbjct: 323 SSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIV 366 Score = 54.7 bits (130), Expect = 2e-06 Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 20/309 (6%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSK-GFGFVRFAERECAYIAKR 279 A ++VG L TE L + F G + RI +D S G+G+V F A A Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 280 QKNGVELQGKRLAVDLSLDQDTL--------FFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N + GK + S D L F NL K L F +++S Sbjct: 78 TMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGNILSCK 136 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL------RIGSRTDFMLGGILHPAIN 597 + D + SK G+A+V F S AA R + R+ +R ++ G P Sbjct: 137 VVC----DDNGSK-----GYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV-GRFKFPE-- 184 Query: 598 WTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP---VG 768 ER + V + A FV N+ + +++ LK+LF +G V V R G Sbjct: 185 --ERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFG 242 Query: 769 FIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVEN--DNKRSREEVKTRRS 942 F+ + + A+ ++ GK++ G + V A+ +E + +R E ++ + Sbjct: 243 FVRYETHEAAQKAVLDLHGKSIDGK------VLYVGRAQKKIERLAELRRRFERLRLKEK 296 Query: 943 NVSGGKPDY 969 + G P Y Sbjct: 297 SRPPGVPIY 305
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 60.1 bits (144), Expect = 5e-08 Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 31/284 (10%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D++ R+ +F+ L +S L +FS G I+ +++ D NG SKG+ +V F Sbjct: 97 DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSL 155 Query: 256 ECAYIAKRQKNGVELQGKRL-----------AVDLSLDQDTLFFGNLCKEWSAEEFEELI 402 A A NGV L +++ A ++ F K + +E + Sbjct: 156 AAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKL 215 Query: 403 HKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAAR-VLRIGSRTDFMLGGI 579 + F + + S SK GF FVR+ +H AA + VL + ++ + G + Sbjct: 216 KELFCEYGPTESVKVIRDASGKSK-----GFGFVRYETHEAAQKAVLDLHGKS--IDGKV 268 Query: 580 LHPAINWTERESNVDADEMAKIRTAF-----------------VGNLPANANEDYLKKLF 708 L+ + + +A++R F + NL N++ LK+ F Sbjct: 269 LYVG------RAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEF 322 Query: 709 GRFGEVIRVAVSRKGQYPVGF--IHFGSRSELDNAIKEMDGKTV 834 FG + R V + GF + F S E A+ EM+G+ V Sbjct: 323 SSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIV 366 Score = 54.7 bits (130), Expect = 2e-06 Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 20/309 (6%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSK-GFGFVRFAERECAYIAKR 279 A ++VG L TE L + F G + RI +D S G+G+V F A A Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 280 QKNGVELQGKRLAVDLSLDQDTL--------FFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N + GK + S D L F NL K L F +++S Sbjct: 78 TMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGNILSCK 136 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL------RIGSRTDFMLGGILHPAIN 597 + D + SK G+A+V F S AA R + R+ +R ++ G P Sbjct: 137 VVC----DDNGSK-----GYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV-GRFKFPE-- 184 Query: 598 WTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP---VG 768 ER + V + A FV N+ + +++ LK+LF +G V V R G Sbjct: 185 --ERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFG 242 Query: 769 FIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVEN--DNKRSREEVKTRRS 942 F+ + + A+ ++ GK++ G + V A+ +E + +R E ++ + Sbjct: 243 FVRYETHEAAQKAVLDLHGKSIDGK------VLYVGRAQKKIERLAELRRRFERLRLKEK 296 Query: 943 NVSGGKPDY 969 + G P Y Sbjct: 297 SRPPGVPIY 305
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 60.1 bits (144), Expect = 5e-08 Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 31/284 (10%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D++ R+ +F+ L +S L +FS G I+ +++ D NG SKG+ +V F Sbjct: 97 DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSL 155 Query: 256 ECAYIAKRQKNGVELQGKRL-----------AVDLSLDQDTLFFGNLCKEWSAEEFEELI 402 A A NGV L +++ A ++ F K + +E + Sbjct: 156 AAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKL 215 Query: 403 HKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAAR-VLRIGSRTDFMLGGI 579 + F + + S SK GF FVR+ +H AA + VL + ++ + G + Sbjct: 216 KELFCEYGPTESVKVIRDASGKSK-----GFGFVRYETHEAAQKAVLDLHGKS--IDGKV 268 Query: 580 LHPAINWTERESNVDADEMAKIRTAF-----------------VGNLPANANEDYLKKLF 708 L+ + + +A++R F + NL N++ LK+ F Sbjct: 269 LYVG------RAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEF 322 Query: 709 GRFGEVIRVAVSRKGQYPVGF--IHFGSRSELDNAIKEMDGKTV 834 FG + R V + GF + F S E A+ EM+G+ V Sbjct: 323 SSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIV 366 Score = 54.7 bits (130), Expect = 2e-06 Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 20/309 (6%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSK-GFGFVRFAERECAYIAKR 279 A ++VG L TE L + F G + RI +D S G+G+V F A A Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 280 QKNGVELQGKRLAVDLSLDQDTL--------FFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N + GK + S D L F NL K L F +++S Sbjct: 78 TMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGNILSCK 136 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL------RIGSRTDFMLGGILHPAIN 597 + D + SK G+A+V F S AA R + R+ +R ++ G P Sbjct: 137 VVC----DDNGSK-----GYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV-GRFKFPE-- 184 Query: 598 WTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP---VG 768 ER + V + A FV N+ + +++ LK+LF +G V V R G Sbjct: 185 --ERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFG 242 Query: 769 FIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVEN--DNKRSREEVKTRRS 942 F+ + + A+ ++ GK++ G + V A+ +E + +R E ++ + Sbjct: 243 FVRYETHEAAQKAVLDLHGKSIDGK------VLYVGRAQKKIERLAELRRRFERLRLKEK 296 Query: 943 NVSGGKPDY 969 + G P Y Sbjct: 297 SRPPGVPIY 305
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 60.1 bits (144), Expect = 5e-08 Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 31/284 (10%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAER 255 D++ R+ +F+ L +S L +FS G I+ +++ D NG SKG+ +V F Sbjct: 97 DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSL 155 Query: 256 ECAYIAKRQKNGVELQGKRL-----------AVDLSLDQDTLFFGNLCKEWSAEEFEELI 402 A A NGV L +++ A ++ F K + +E + Sbjct: 156 AAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKL 215 Query: 403 HKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAAR-VLRIGSRTDFMLGGI 579 + F + + S SK GF FVR+ +H AA + VL + ++ + G + Sbjct: 216 KELFCEYGPTESVKVIRDASGKSK-----GFGFVRYETHEAAQKAVLDLHGKS--IDGKV 268 Query: 580 LHPAINWTERESNVDADEMAKIRTAF-----------------VGNLPANANEDYLKKLF 708 L+ + + +A++R F + NL N++ LK+ F Sbjct: 269 LYVG------RAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEF 322 Query: 709 GRFGEVIRVAVSRKGQYPVGF--IHFGSRSELDNAIKEMDGKTV 834 FG + R V + GF + F S E A+ EM+G+ V Sbjct: 323 SSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIV 366 Score = 54.7 bits (130), Expect = 2e-06 Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 20/309 (6%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSK-GFGFVRFAERECAYIAKR 279 A ++VG L TE L + F G + RI +D S G+G+V F A A Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 280 QKNGVELQGKRLAVDLSLDQDTL--------FFGNLCKEWSAEEFEELIHKTFKDVISVD 435 N + GK + S D L F NL K L F +++S Sbjct: 78 TMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGNILSCK 136 Query: 436 LAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL------RIGSRTDFMLGGILHPAIN 597 + D + SK G+A+V F S AA R + R+ +R ++ G P Sbjct: 137 VVC----DDNGSK-----GYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV-GRFKFPE-- 184 Query: 598 WTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP---VG 768 ER + V + A FV N+ + +++ LK+LF +G V V R G Sbjct: 185 --ERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFG 242 Query: 769 FIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVEN--DNKRSREEVKTRRS 942 F+ + + A+ ++ GK++ G + V A+ +E + +R E ++ + Sbjct: 243 FVRYETHEAAQKAVLDLHGKSIDGK------VLYVGRAQKKIERLAELRRRFERLRLKEK 296 Query: 943 NVSGGKPDY 969 + G P Y Sbjct: 297 SRPPGVPIY 305
>Q9JJ54:HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 - Rattus norvegicus| (Rat) Length = 353 Score = 60.1 bits (144), Expect = 5e-08 Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 6/151 (3%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQ 282 ++F+GGL T+ L++ FS G++VD + D G S+GFGFV F E E Q Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155 Query: 283 K----NGVELQGKRL-AVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 K NG + KR A+ +F G L + E+ E F +V S++L M Sbjct: 156 KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYF-GGFGEVESIELPM- 213 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 D+ T+KR RGF F+ F +++ Sbjct: 214 ---DNKTNKR---RGFCFITFKEEEPVKKIM 238 Score = 37.7 bits (86), Expect = 0.25 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 2/152 (1%) Frame = +1 Query: 346 LFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGA 525 +F G L + + ++ ++ K F DV+ L + P S RGF FV F + Sbjct: 97 MFIGGLSWDTTKKDLKDYFSK-FGDVVDCTLKLDPITGRS-------RGFGFVLFKESES 148 Query: 526 AARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKL 705 +V+ + + G ++ P +R + E ++ FVG L + E+ +++ Sbjct: 149 VDKVM--DQKEHKLNGKVIDP-----KRAKAMKTKE--PVKKIFVGGLSPDTPEEKIREY 199 Query: 706 FGRFGEV--IRVAVSRKGQYPVGFIHFGSRSE 795 FG FGEV I + + K GF + E Sbjct: 200 FGGFGEVESIELPMDNKTNKRRGFCFITFKEE 231
>Q13148:TADBP_HUMAN TAR DNA-binding protein 43 - Homo sapiens (Human)| Length = 414 Score = 59.7 bits (143), Expect = 6e-08 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 8/147 (5%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 K +++ V GLP TE L+E FST GE++ +++ KD + G SKGFGFVRF E E Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161 Query: 274 KRQKNGVE-------LQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISV 432 Q++ ++ L + + D L +F G ++ + +E E + + DV+ V Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQ-YGDVMDV 220 Query: 433 DLAMAPNLDSSTSKRRLNRGFAFVRFS 513 + + R FAFV F+ Sbjct: 221 FIP------------KPFRAFAFVTFA 235 Score = 40.4 bits (93), Expect = 0.038 Identities = 23/61 (37%), Positives = 33/61 (54%) Frame = +1 Query: 82 QDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAEREC 261 QD ++ +VFVG TE LRE FS G+++D+ I K + F FV FA+ + Sbjct: 184 QDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP----FRAFAFVTFADDQI 239 Query: 262 A 264 A Sbjct: 240 A 240 Score = 37.0 bits (84), Expect = 0.42 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 3/91 (3%) Frame = +1 Query: 484 NRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERE---SNVDADEMAKIRTA 654 ++GF FVRF+ + +V+ M+ G W + + S DE + R Sbjct: 144 SKGFGFVRFTEYETQVKVMS----QRHMIDG------RWCDCKLPNSKQSQDEPLRSRKV 193 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSR 747 FVG + ED L++ F ++G+V+ V + + Sbjct: 194 FVGRCTEDMTEDELREFFSQYGDVMDVFIPK 224
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 59.3 bits (142), Expect = 8e-08 Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 10/156 (6%) Frame = +1 Query: 91 RVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAY 267 R + A V+VGGL +E L E+F G +V+ + KD+ G +G+GFV F E A Sbjct: 9 RNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDAD 68 Query: 268 IAKRQKNGVELQGKRLAVDLSLDQD-------TLFFGNLCKEWSAEEFEELIHKTFK--D 420 A + N ++L GK + V+ + + +F GNL E E+L++ TF Sbjct: 69 YAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNL----DPEIDEKLLYDTFSAFG 124 Query: 421 VISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAA 528 VI + + D+ SK G+AF+ F+S A+ Sbjct: 125 VILQTPKIMRDPDTGNSK-----GYAFINFASFDAS 155
>Q8R0F5:RBMX2_MOUSE RNA-binding motif protein, X-linked 2 - Mus musculus (Mouse)| Length = 326 Score = 58.9 bits (141), Expect = 1e-07 Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKR 279 A +FVGGLP TEG + +FS GEIV++ +++D + G SKGF F+ + ++ +A Sbjct: 36 AWIFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVD 95 Query: 280 QKNGVELQGKRLAVD 324 NG++++G+ + VD Sbjct: 96 NFNGIKIKGRTIRVD 110
>Q86U06:RBM23_HUMAN Probable RNA-binding protein 23 - Homo sapiens (Human)| Length = 439 Score = 58.9 bits (141), Expect = 1e-07 Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 ++VG L + TE LR IF G+I ++ +MKD + G SKG+GF+ F++ ECA A Q Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324 Query: 286 NGVELQGKRLAV 321 NG EL G+ + V Sbjct: 325 NGFELAGRPMRV 336 Score = 33.9 bits (76), Expect = 3.5 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNG-VSKGFGFVRFAE 252 +E+D R VF L L + FS G++ D+RI+ D+N SKG +V F E Sbjct: 161 EERDART----VFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCE 216 Query: 253 RECAYIAKRQKNGVELQGKRL 315 + +A + L G+RL Sbjct: 217 IQSVPLA------IGLTGQRL 231
>P52912:TIA1_MOUSE Nucleolysin TIA-1 - Mus musculus (Mouse)| Length = 386 Score = 58.5 bits (140), Expect = 1e-07 Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 34/278 (12%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 ++VG L R TE + ++FS G + +++ D G + + FV F E A A N Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAG-NDPYCFVEFHEHRHAAAALAAMN 67 Query: 289 GVELQGKRLAVD-----LSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDL--AMA 447 G ++ GK + V+ S +DT + + S + F + ++ + D+ A A Sbjct: 68 GRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFA 127 Query: 448 P---------NLDSSTSKRRLNRGFAFVR-FSSHGAAARVLRIGSRTDFMLGGILHPAIN 597 P D +T K ++G+ FV F+ A + ++G + LGG N Sbjct: 128 PFGRISDARVVKDMATGK---SKGYGFVSFFNKWDAENAIQQMGGQ---WLGG-RQIRTN 180 Query: 598 WTER---------ESN---VDADEMAKIR-----TAFVGNLPANANEDYLKKLFGRFGEV 726 W R ESN + DE+ T + G + + E +++ F FG++ Sbjct: 181 WATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQI 240 Query: 727 IRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSG 840 + + V Y F+ F S +AI ++G T+ G Sbjct: 241 MEIRVFPDKGY--SFVRFSSHESAAHAIVSVNGTTIEG 276 Score = 49.7 bits (117), Expect = 6e-05 Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 15/183 (8%) Frame = +1 Query: 37 PKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-N 213 P ++ S R VFVG L T ++ F+ G I D R++KD Sbjct: 84 PSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMAT 143 Query: 214 GVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFE 393 G SKG+GFV F + A A +Q G L G+++ + + + ++ Sbjct: 144 GKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYD 203 Query: 394 ELIHKTFKDVISVDLA-MAPNLDSSTSKRRLN-------------RGFAFVRFSSHGAAA 531 E++ ++ + +V + L ++ + +G++FVRFSSH +AA Sbjct: 204 EVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAA 263 Query: 532 RVL 540 + Sbjct: 264 HAI 266
>Q5FVM4:NONO_RAT Non-POU domain-containing octamer-binding protein - Rattus| norvegicus (Rat) Length = 476 Score = 58.5 bits (140), Expect = 1e-07 Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 3/159 (1%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQ 282 + +FVG LP TE +R++F G+ ++ I KD KGFGF+R R A IAK + Sbjct: 79 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-----KGFGFIRLETRTLAEIAKVE 133 Query: 283 KNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEE---LIHKTFKDVISVDLAMAPN 453 + + L+GK+L V + +L NL + S E EE + + + V+ VD P+ Sbjct: 134 LDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDRGRPS 193 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFML 570 G V FS AA + L S F+L Sbjct: 194 ------------GKGIVEFSGKPAARKALDRCSEGSFLL 220 Score = 37.4 bits (85), Expect = 0.32 Identities = 20/62 (32%), Positives = 35/62 (56%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTV 834 FVGNLP + E+ ++KLF ++G+ V + + + GFI +R+ + A E+D + Sbjct: 82 FVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGF--GFIRLETRTLAEIAKVELDNMPL 139 Query: 835 SG 840 G Sbjct: 140 RG 141
>Q5RFL9:NONO_PONPY Non-POU domain-containing octamer-binding protein - Pongo pygmaeus| (Orangutan) Length = 471 Score = 58.5 bits (140), Expect = 1e-07 Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 3/159 (1%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQ 282 + +FVG LP TE +R++F G+ ++ I KD KGFGF+R R A IAK + Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-----KGFGFIRLETRTLAEIAKVE 128 Query: 283 KNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEE---LIHKTFKDVISVDLAMAPN 453 + + L+GK+L V + +L NL + S E EE + + + V+ VD P+ Sbjct: 129 LDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDRGRPS 188 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFML 570 G V FS AA + L S F+L Sbjct: 189 ------------GKGIVEFSGKPAARKALDRCSEGSFLL 215 Score = 37.4 bits (85), Expect = 0.32 Identities = 20/62 (32%), Positives = 35/62 (56%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTV 834 FVGNLP + E+ ++KLF ++G+ V + + + GFI +R+ + A E+D + Sbjct: 77 FVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGF--GFIRLETRTLAEIAKVELDNMPL 134 Query: 835 SG 840 G Sbjct: 135 RG 136
>Q99K48:NONO_MOUSE Non-POU domain-containing octamer-binding protein - Mus musculus| (Mouse) Length = 473 Score = 58.5 bits (140), Expect = 1e-07 Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 3/159 (1%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQ 282 + +FVG LP TE +R++F G+ ++ I KD KGFGF+R R A IAK + Sbjct: 76 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-----KGFGFIRLETRTLAEIAKVE 130 Query: 283 KNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEE---LIHKTFKDVISVDLAMAPN 453 + + L+GK+L V + +L NL + S E EE + + + V+ VD P+ Sbjct: 131 LDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDRGRPS 190 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFML 570 G V FS AA + L S F+L Sbjct: 191 ------------GKGIVEFSGKPAARKALDRCSEGSFLL 217 Score = 37.4 bits (85), Expect = 0.32 Identities = 20/62 (32%), Positives = 35/62 (56%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTV 834 FVGNLP + E+ ++KLF ++G+ V + + + GFI +R+ + A E+D + Sbjct: 79 FVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGF--GFIRLETRTLAEIAKVELDNMPL 136 Query: 835 SG 840 G Sbjct: 137 RG 138
>Q15233:NONO_HUMAN Non-POU domain-containing octamer-binding protein - Homo sapiens| (Human) Length = 471 Score = 58.5 bits (140), Expect = 1e-07 Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 3/159 (1%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQ 282 + +FVG LP TE +R++F G+ ++ I KD KGFGF+R R A IAK + Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-----KGFGFIRLETRTLAEIAKVE 128 Query: 283 KNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEE---LIHKTFKDVISVDLAMAPN 453 + + L+GK+L V + +L NL + S E EE + + + V+ VD P+ Sbjct: 129 LDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDRGRPS 188 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFML 570 G V FS AA + L S F+L Sbjct: 189 ------------GKGIVEFSGKPAARKALDRCSEGSFLL 215 Score = 37.4 bits (85), Expect = 0.32 Identities = 20/62 (32%), Positives = 35/62 (56%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTV 834 FVGNLP + E+ ++KLF ++G+ V + + + GFI +R+ + A E+D + Sbjct: 77 FVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGF--GFIRLETRTLAEIAKVELDNMPL 134 Query: 835 SG 840 G Sbjct: 135 RG 136
>Q9Y388:RBMX2_HUMAN RNA-binding motif protein, X-linked 2 - Homo sapiens (Human)| Length = 322 Score = 58.2 bits (139), Expect = 2e-07 Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 1/88 (1%) Frame = +1 Query: 64 HGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFV 240 H +Y + A +F+GGLP TEG + +FS GEIV++ +++D + G SKGF F+ Sbjct: 29 HSEYKDS------AWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFL 82 Query: 241 RFAERECAYIAKRQKNGVELQGKRLAVD 324 + ++ +A NG++++G+ + VD Sbjct: 83 CYEDQRSTILAVDNFNGIKIKGRTIRVD 110
>Q5RC80:RBM39_PONPY RNA-binding protein 39 - Pongo pygmaeus (Orangutan)| Length = 524 Score = 58.2 bits (139), Expect = 2e-07 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 ++VG L + TE LR IF G I +++M D + G SKG+GF+ F++ ECA A Q Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311 Query: 286 NGVELQGKRLAV 321 NG EL G+ + V Sbjct: 312 NGFELAGRPMKV 323 Score = 36.6 bits (83), Expect = 0.55 Identities = 54/214 (25%), Positives = 84/214 (39%), Gaps = 25/214 (11%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNG-VSKGFGFVRFAE 252 +E+D R VF L L E FST G++ D+R++ D+N SKG +V F + Sbjct: 148 EERDART----VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVD 203 Query: 253 RECAYIA------------------KRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWS 378 +A + +KN L S L+ G+L Sbjct: 204 VSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKG-SAGPMRLYVGSLHFN-I 261 Query: 379 AEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRT 558 E+ I + F + S+ L M DS T + ++G+ F+ FS A + L Sbjct: 262 TEDMLRGIFEPFGRIESIQLMM----DSETGR---SKGYGFITFSDSECAKKALE--QLN 312 Query: 559 DFMLGGILHPAINWTER------ESNVDADEMAK 642 F L G + TER S +D+DE+ + Sbjct: 313 GFELAGRPMKVGHVTERTDASSASSFLDSDELER 346
>Q8VH51:RBM39_MOUSE RNA-binding protein 39 - Mus musculus (Mouse)| Length = 530 Score = 58.2 bits (139), Expect = 2e-07 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 ++VG L + TE LR IF G I +++M D + G SKG+GF+ F++ ECA A Q Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311 Query: 286 NGVELQGKRLAV 321 NG EL G+ + V Sbjct: 312 NGFELAGRPMKV 323 Score = 35.8 bits (81), Expect = 0.93 Identities = 53/214 (24%), Positives = 84/214 (39%), Gaps = 25/214 (11%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNG-VSKGFGFVRFAE 252 +E+D R VF L L E FST G++ D+R++ D+N S+G +V F + Sbjct: 148 EERDART----VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVD 203 Query: 253 RECAYIA------------------KRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWS 378 +A + +KN L S L+ G+L Sbjct: 204 VSSVRLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKG-SAGPMRLYVGSLHFN-I 261 Query: 379 AEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRT 558 E+ I + F + S+ L M DS T + ++G+ F+ FS A + L Sbjct: 262 TEDMLRGIFEPFGRIESIQLMM----DSETGR---SKGYGFITFSDSECAKKALE--QLN 312 Query: 559 DFMLGGILHPAINWTER------ESNVDADEMAK 642 F L G + TER S +D+DE+ + Sbjct: 313 GFELAGRPMKVGHVTERTDASSASSFLDSDELER 346
>Q14498:RBM39_HUMAN RNA-binding protein 39 - Homo sapiens (Human)| Length = 530 Score = 58.2 bits (139), Expect = 2e-07 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 ++VG L + TE LR IF G I +++M D + G SKG+GF+ F++ ECA A Q Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311 Query: 286 NGVELQGKRLAV 321 NG EL G+ + V Sbjct: 312 NGFELAGRPMKV 323 Score = 36.6 bits (83), Expect = 0.55 Identities = 54/214 (25%), Positives = 84/214 (39%), Gaps = 25/214 (11%) Frame = +1 Query: 76 DEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNG-VSKGFGFVRFAE 252 +E+D R VF L L E FST G++ D+R++ D+N SKG +V F + Sbjct: 148 EERDART----VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVD 203 Query: 253 RECAYIA------------------KRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWS 378 +A + +KN L S L+ G+L Sbjct: 204 VSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKG-SAGPMRLYVGSLHFN-I 261 Query: 379 AEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRT 558 E+ I + F + S+ L M DS T + ++G+ F+ FS A + L Sbjct: 262 TEDMLRGIFEPFGRIESIQLMM----DSETGR---SKGYGFITFSDSECAKKALE--QLN 312 Query: 559 DFMLGGILHPAINWTER------ESNVDADEMAK 642 F L G + TER S +D+DE+ + Sbjct: 313 GFELAGRPMKVGHVTERTDASSASSFLDSDELER 346
>P62997:TRA2B_RAT Splicing factor, arginine/serine-rich 10 - Rattus norvegicus (Rat)| Length = 288 Score = 57.8 bits (138), Expect = 2e-07 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = +1 Query: 115 VGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGV-SKGFGFVRFAERECAYIAKRQKNG 291 V GL TE LRE+FS G I D+ I+ DQ S+GF FV F + A AK + NG Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 292 VELQGKRLAVDLSL 333 +EL G+R+ VD S+ Sbjct: 182 MELDGRRIRVDFSI 195
>P62996:TRA2B_MOUSE Splicing factor, arginine/serine-rich 10 - Mus musculus (Mouse)| Length = 288 Score = 57.8 bits (138), Expect = 2e-07 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = +1 Query: 115 VGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGV-SKGFGFVRFAERECAYIAKRQKNG 291 V GL TE LRE+FS G I D+ I+ DQ S+GF FV F + A AK + NG Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 292 VELQGKRLAVDLSL 333 +EL G+R+ VD S+ Sbjct: 182 MELDGRRIRVDFSI 195
>P62995:TRA2B_HUMAN Splicing factor, arginine/serine-rich 10 - Homo sapiens (Human)| Length = 288 Score = 57.8 bits (138), Expect = 2e-07 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = +1 Query: 115 VGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGV-SKGFGFVRFAERECAYIAKRQKNG 291 V GL TE LRE+FS G I D+ I+ DQ S+GF FV F + A AK + NG Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 292 VELQGKRLAVDLSL 333 +EL G+R+ VD S+ Sbjct: 182 MELDGRRIRVDFSI 195
>Q3ZBT6:TRA2B_BOVIN Splicing factor, arginine/serine-rich 10 - Bos taurus (Bovine)| Length = 288 Score = 57.8 bits (138), Expect = 2e-07 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = +1 Query: 115 VGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGV-SKGFGFVRFAERECAYIAKRQKNG 291 V GL TE LRE+FS G I D+ I+ DQ S+GF FV F + A AK + NG Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 292 VELQGKRLAVDLSL 333 +EL G+R+ VD S+ Sbjct: 182 MELDGRRIRVDFSI 195
>P48810:RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87F - Drosophila| melanogaster (Fruit fly) Length = 385 Score = 57.8 bits (138), Expect = 2e-07 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 15/175 (8%) Frame = +1 Query: 61 SHGDYDEQDRRVKGAEV---FVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKG 228 S+G+YD+ + + ++ F+GGL T+ L+ F G IVD+ +MKD + S+G Sbjct: 7 SNGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRG 66 Query: 229 FGFVRFAER---ECAYIAKRQK-NGVELQGKRLAVDLSLDQDT-------LFFGNLCKEW 375 FGF+ +++ + A A+ K +G ++ KR +D LF G L + Sbjct: 67 FGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDH 126 Query: 376 SAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 E E K F ++SV++ D T K+ RGFAF+ F + +++ Sbjct: 127 DEECLREYF-KDFGQIVSVNIVS----DKDTGKK---RGFAFIEFDDYDPVDKII 173 Score = 43.1 bits (100), Expect = 0.006 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Frame = +1 Query: 25 RREEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 R EPK RA + D + ++FVGGL E LRE F G+IV + I+ Sbjct: 92 RTVEPK---RAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVS 148 Query: 205 DQN-GVSKGFGFVRF 246 D++ G +GF F+ F Sbjct: 149 DKDTGKKRGFAFIEF 163
>P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog)| Length = 651 Score = 57.8 bits (138), Expect = 2e-07 Identities = 70/315 (22%), Positives = 134/315 (42%), Gaps = 6/315 (1%) Frame = +1 Query: 34 EPKMDRRAASHGDYDEQDRRVKGAE-VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ 210 E K+++ A + ++++ + + +FV +P S T L+EIF D+RI + Sbjct: 301 EVKIEKAMAFDKNKTAENKKERDSRTLFVKNIPYSTTVEELQEIFENAK---DIRIPTGK 357 Query: 211 NGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEF 390 +G +KG +V F+ + A A +K G E++G+ + VD + ++ E ++ Sbjct: 358 DGSNKGIAYVEFSNEDEANKALEEKQGAEIEGRSIFVDFTGEKSQNSGNKKGPEGDSKVL 417 Query: 391 --EELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDF 564 L + +D + A ++ ++ R +GFAF+ FSS A + + T+ Sbjct: 418 VVNNLSYSATEDSLREVFEKATSIRIPQNQGRA-KGFAFIEFSSAEDAKDAMDSCNNTE- 475 Query: 565 MLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEV-IRVAV 741 + G + + A+ +T FV L + E+ LK+ F G V R+ Sbjct: 476 IEGRSIRLEFSQGGGPQGGGRGGSAQSKTLFVRGLSEDTTEETLKEAFD--GSVNARIVT 533 Query: 742 SRK--GQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNKRS 915 R GF+ F + + A + M+ + G K+ + A+P + D++R Sbjct: 534 DRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGN------KVTLDFAKP--KGDSQRG 585 Query: 916 REEVKTRRSNVSGGK 960 R GG+ Sbjct: 586 GRGGFGRGGGFRGGR 600
>Q00539:NAM8_YEAST Protein NAM8 - Saccharomyces cerevisiae (Baker's yeast)| Length = 523 Score = 57.8 bits (138), Expect = 2e-07 Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 9/271 (3%) Frame = +1 Query: 40 KMDRRAASHGDYDEQDRRVKGAE---VFVGGLPRSATEGTLREIF-STCGEIVDLRIMKD 207 K++ +S+ + + VK +FVG L + TE L E+F + +I+ D Sbjct: 139 KLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHD 198 Query: 208 Q-NGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAE 384 Q G+SKG+GFV+F + +A + GV L G+ + V + Q GN S+ Sbjct: 199 QVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSS 258 Query: 385 EFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDF 564 N+DS R L++G +F+ S+G + + F Sbjct: 259 SLNN-----------------ENVDS----RFLSKGQSFL---SNGNNNMGFKRNHMSQF 294 Query: 565 MLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVS 744 + P++N +N T F+G L + ED L+ F FG ++ V + Sbjct: 295 IYPVQQQPSLNHFTDPNNT---------TVFIGGLSSLVTEDELRAYFQPFGTIVYVKI- 344 Query: 745 RKGQYPV----GFIHFGSRSELDNAIKEMDG 825 PV GF+ + R + AI M G Sbjct: 345 -----PVGKCCGFVQYVDRLSAEAAIAGMQG 370
>P70372:ELAV1_MOUSE ELAV-like protein 1 - Mus musculus (Mouse)| Length = 326 Score = 57.8 bits (138), Expect = 2e-07 Identities = 80/334 (23%), Positives = 136/334 (40%), Gaps = 60/334 (17%) Frame = +1 Query: 55 AASHGDYDEQDRR--VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSK 225 + + D+ +D R + + V LP++ T+ LR +FS+ GE+ ++++D+ G S Sbjct: 2 SGGYEDHMAEDCRGDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSL 61 Query: 226 GFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLS------LDQDTLFFGNLCKEWSAEE 387 G+GFV + + A A NG+ LQ K + V + + L+ L + + ++ Sbjct: 62 GYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKD 121 Query: 388 FEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR--IG---- 549 E++ + + + S L +D +T L+RG AF+RF A + IG Sbjct: 122 VEDMFSRFGRIINSRVL-----VDQTTG---LSRGVAFIRFDKRSEAEEAITSFIGHKPP 173 Query: 550 ----------------SRTDFMLGGILH-PAINW---------TERESNVDADEMAKIR- 648 ++ +L + H PA + R S + D M+ I Sbjct: 174 GSSEPITVKFAANPNQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISG 233 Query: 649 -----------TAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------KGQYPVGFI 774 F+ NL +A+E L ++FG FG V V V R KG GF+ Sbjct: 234 VNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG---FGFV 290 Query: 775 HFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVS 876 + E AI ++G + SFK S Sbjct: 291 TMTNYEESAMAIASLNGYRLGDKILQVSFKTNKS 324 Score = 33.1 bits (74), Expect = 6.0 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Frame = +1 Query: 658 VGNLPANANEDYLKKLFGRFGEVIRVAVSRK----GQYPVGFIHFGSRSELDNAIKEMDG 825 V LP N ++ L+ LF GEV + R GF+++ + + + AI ++G Sbjct: 24 VNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG 83 Query: 826 KTVSGPNRGPSFKIQVSVARPAVE 897 R S I+VS ARP+ E Sbjct: 84 L------RLQSKTIKVSYARPSSE 101
>Q5M9F1:RBM34_RAT RNA-binding protein 34 - Rattus norvegicus (Rat)| Length = 428 Score = 57.4 bits (137), Expect = 3e-07 Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 VFVG LP E L E F CG IV +RI+++ GV +GFG+V F + ++A + Sbjct: 287 VFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLN 346 Query: 286 NGVELQGKRLAVDLSLDQDTL 348 N EL G++L V S++++ L Sbjct: 347 NS-ELMGRKLRVMRSVNKEKL 366 Score = 40.4 bits (93), Expect = 0.038 Identities = 65/295 (22%), Positives = 113/295 (38%), Gaps = 45/295 (15%) Frame = +1 Query: 274 KRQKNGVELQGKRLAVDLSLDQD--------------------TLFFGNLCKEWSAEEFE 393 + Q G G+ L V LSL++D T+F GNL + ++ + Sbjct: 141 RSQSRGKVTDGEALDVALSLNEDGRQRTKVPLNPEEERLKNERTVFVGNLPVTCNKKKLK 200 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKR--RLNRGF--------AFVRFSSHGAAARVLR 543 K + V SV + + SK+ + R F A+V F AAA+ L+ Sbjct: 201 SFF-KEYGQVESVRFRSVMPAEGTLSKKLAAIKRKFHPDQKSINAYVVFKEERAAAKALQ 259 Query: 544 IGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGE 723 R + ++ ++ D R+ FVGNLP +E L++ F G Sbjct: 260 ---RNGAQIAEGFRIRVDLASETASRDK------RSVFVGNLPYRVDESALEEHFLDCGS 310 Query: 724 VIRVAVSRKGQYPV----GFIHFGSRSELDNAIK----EMDGKTVSGPNRGPSFKIQVSV 879 ++ V + R V G++ F + + A+K E+ G+ + K++ Sbjct: 311 IVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVMRSVNKEKLKQQN 370 Query: 880 ARPAVENDNKRSRE-------EVKTRRSNVSGGKPDYSHGRYGHDSLDRQTKAPR 1023 + P+V+ D +S++ E K+ N G+ + QTK PR Sbjct: 371 SNPSVKKDGSKSKQRLNFTSKEGKSHSKNAFIGEKAVLMKKKKGQKKKGQTKKPR 425
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 57.4 bits (137), Expect = 3e-07 Identities = 75/316 (23%), Positives = 125/316 (39%), Gaps = 60/316 (18%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 + V LP++ T+ LR +FS+ GE+ ++++D+ G S G+GFV + + A A Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81 Query: 286 NGVELQGKRLAVDLS------LDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 NG+ LQ K + V + + L+ L + + ++ E++ + + + S L Sbjct: 82 NGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVL--- 138 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI-------GSRTDFML------------ 570 +D +T L+RG AF+RF A + GS + Sbjct: 139 --VDQTTG---LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNV 193 Query: 571 ---------------GGILHPAINWTERESNVDADEMAKIR------------TAFVGNL 669 G + H A + R S + D M+ + F+ NL Sbjct: 194 ALLSQLYHSPARRFGGPVHHQAQRF--RFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNL 251 Query: 670 PANANEDYLKKLFGRFGEVIRVAVSR-------KGQYPVGFIHFGSRSELDNAIKEMDGK 828 +A+E L ++FG FG V V V R KG GF+ + E AI ++G Sbjct: 252 GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG---FGFVTMTNYEEAAMAIASLNGY 308 Query: 829 TVSGPNRGPSFKIQVS 876 + SFK S Sbjct: 309 RLGDKILQVSFKTNKS 324 Score = 34.7 bits (78), Expect = 2.1 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Frame = +1 Query: 658 VGNLPANANEDYLKKLFGRFGEVIRVAVSRK----GQYPVGFIHFGSRSELDNAIKEMDG 825 V LP N +D L+ LF GEV + R GF+++ + + + AI ++G Sbjct: 24 VNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG 83 Query: 826 KTVSGPNRGPSFKIQVSVARPAVE 897 R S I+VS ARP+ E Sbjct: 84 L------RLQSKTIKVSYARPSSE 101
>P31483:TIA1_HUMAN Nucleolysin TIA-1 isoform p40 - Homo sapiens (Human)| Length = 386 Score = 57.0 bits (136), Expect = 4e-07 Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 34/278 (12%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 ++VG L R TE + ++FS G + +++ D G + + FV F E A A N Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAG-NDPYCFVEFHEHRHAAAALAAMN 67 Query: 289 GVELQGKRLAVD-----LSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDL--AMA 447 G ++ GK + V+ S +DT + + S F + + + D+ A A Sbjct: 68 GRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQNHFHVFVGDLSPQITTEDIKAAFA 127 Query: 448 P---------NLDSSTSKRRLNRGFAFVR-FSSHGAAARVLRIGSRTDFMLGGILHPAIN 597 P D +T K ++G+ FV F+ A + ++G + LGG N Sbjct: 128 PFGRISDARVVKDMATGK---SKGYGFVSFFNKWDAENAIQQMGGQ---WLGG-RQIRTN 180 Query: 598 WTER---------ESN---VDADEMAKIR-----TAFVGNLPANANEDYLKKLFGRFGEV 726 W R ESN + DE+ T + G + + E +++ F FG++ Sbjct: 181 WATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI 240 Query: 727 IRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSG 840 + + V Y F+ F S +AI ++G T+ G Sbjct: 241 MEIRVFPDKGY--SFVRFNSHESAAHAIVSVNGTTIEG 276 Score = 49.3 bits (116), Expect = 8e-05 Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 30/198 (15%) Frame = +1 Query: 37 PKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-N 213 P ++ S R VFVG L T ++ F+ G I D R++KD Sbjct: 84 PSSQKKDTSSSTVVSTQRSQNHFHVFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMAT 143 Query: 214 GVSKGFGFVRFAERECAYIAKRQKNGVELQG-----------------------KRLAVD 324 G SKG+GFV F + A A +Q G L G K+L+ D Sbjct: 144 GKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYD 203 Query: 325 LSLDQD-----TLFFGNLCKEWSAEEFEELIHKTFKDVISV-DLAMAPNLDSSTSKRRLN 486 ++Q T++ G + + E+L+ +TF + ++ + P + Sbjct: 204 EVVNQSSPSNCTVYCGGVTSGLT----EQLMRQTFSPFGQIMEIRVFP-----------D 248 Query: 487 RGFAFVRFSSHGAAARVL 540 +G++FVRF+SH +AA + Sbjct: 249 KGYSFVRFNSHESAAHAI 266
>Q08935:ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 273 Score = 57.0 bits (136), Expect = 4e-07 Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 22/159 (13%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQ 282 ++FVG LP SA L E+F G + + ++ D+ G S+GFGFV + +E A +Q Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147 Query: 283 KNGVELQGKRLAVDL--------------------SLD-QDTLFFGNLCKEWSAEEFEEL 399 NG EL G+ L V+ S D + ++ GNL + E L Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETL 207 Query: 400 IHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSS 516 + K VD + + DS S RGF FV +SS Sbjct: 208 FSEQGK---VVDAKVVYDRDSGRS-----RGFGFVTYSS 238 Score = 49.7 bits (117), Expect = 6e-05 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 1/100 (1%) Frame = +1 Query: 25 RREEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 +RE + G +D +R V+VG L + L +FS G++VD +++ Sbjct: 168 KRENSSFRGGSRGGGSFDSSNR------VYVGNLAWGVDQDALETLFSEQGKVVDAKVVY 221 Query: 205 DQN-GVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAV 321 D++ G S+GFGFV ++ E A +GV+L G+ + V Sbjct: 222 DRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRV 261 Score = 40.0 bits (92), Expect = 0.049 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 17/152 (11%) Frame = +1 Query: 484 NRGFAFV-------------RFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVD 624 +RGF FV +F+ + R LR+ S G N + R + Sbjct: 127 SRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNS------GPPPEKRENSSFRGGSRG 180 Query: 625 ADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKG--QYPVGFIHFGSRS 792 +VGNL ++D L+ LF G+V+ +V R GF+ + S Sbjct: 181 GGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAE 240 Query: 793 ELDNAIKEMDGKTVSGPNRGPSFKIQVSVARP 888 E++NAI+ +DG ++ G + ++ + ARP Sbjct: 241 EVNNAIESLDGVDLN----GRAIRVSPAEARP 268 Score = 35.4 bits (80), Expect = 1.2 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 10/125 (8%) Frame = +1 Query: 511 SSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANED 690 SS ++R +R + +DF + + E E N D KI FVGNLP +A+ Sbjct: 47 SSSCFSSRFVRKVTLSDFDQIEDVEDGDDGVEEERNFSPD--LKI---FVGNLPFSADSA 101 Query: 691 YLKKLFGRFGEVIRVAV------SRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSG---- 840 L +LF R G V V V R + GF+ S+ E++ A ++ +G + G Sbjct: 102 ALAELFERAGNVEMVEVIYDKLTGRSRGF--GFVTMSSKEEVEAACQQFNGYELDGRALR 159 Query: 841 PNRGP 855 N GP Sbjct: 160 VNSGP 164
>Q9SVM8:GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 158 Score = 57.0 bits (136), Expect = 4e-07 Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 1/84 (1%) Frame = +1 Query: 91 RVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAY 267 R+ ++F+GGL + +LR+ F+ G++VD +++ D + G S+GFGFV F + A Sbjct: 31 RLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAAT 90 Query: 268 IAKRQKNGVELQGKRLAVDLSLDQ 339 A + +G EL G+ + V+ + D+ Sbjct: 91 AAISEMDGKELNGRHIRVNPANDR 114 Score = 37.7 bits (86), Expect = 0.25 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKG--QYPVGFIHFGSRSELDNAIKEMD 822 F+G L ++ L+ F FG+V+ +V V R+ GF++F AI EMD Sbjct: 38 FIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMD 97 Query: 823 GKTVSG 840 GK ++G Sbjct: 98 GKELNG 103
>Q99020:ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B - Mus musculus (Mouse)| Length = 285 Score = 56.6 bits (135), Expect = 5e-07 Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 5/173 (2%) Frame = +1 Query: 37 PKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN- 213 P ++ A + ++FVGGL ++ L++ F+ GE+VD I D N Sbjct: 53 PSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNT 112 Query: 214 GVSKGFGFVRFAERECAYIAKRQK----NGVELQGKRLAVDLSLDQDTLFFGNLCKEWSA 381 G S+GFGF+ F + QK +G + K+ +F G L E + Sbjct: 113 GRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATE 172 Query: 382 EEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 E+ E + F ++ +++L + P L+ RGF F+ F +VL Sbjct: 173 EKIREYFGQ-FGEIEAIELPIDPKLNK-------RRGFVFITFKEEDPVKKVL 217 Score = 54.7 bits (130), Expect = 2e-06 Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 4/222 (1%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G L + S ++ ++ K F +V+ + M PN S RGF F+ F Sbjct: 73 DAGKMFVGGLSWDTSKKDLKDYFTK-FGEVVDCTIKMDPNTGRS-------RGFGFILFK 124 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + +VL + + G ++ P ++ + D + KI FVG L A E+ Sbjct: 125 DSSSVEKVL--DQKEHRLDGRVIDP-----KKAMAMKKDPVKKI---FVGGLNPEATEEK 174 Query: 694 LKKLFGRFGEV--IRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGK--TVSGPNRGPSF 861 +++ FG+FGE+ I + + K GF+ F + E D K ++ K TVSG Sbjct: 175 IREYFGQFGEIEAIELPIDPKLNKRRGFV-FITFKEEDPVKKVLEKKFHTVSGS------ 227 Query: 862 KIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGRYG 987 K ++ VA+P +EV ++ SGG+ + + G G Sbjct: 228 KCEIKVAQP----------KEVYQQQQYGSGGRGNRNRGNRG 259
>Q8C854:MYEF2_MOUSE Myelin expression factor 2 - Mus musculus (Mouse)| Length = 591 Score = 56.6 bits (135), Expect = 5e-07 Identities = 34/82 (41%), Positives = 48/82 (58%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 KG ++FV LP T L+E FS CG ++ I K +NG SKG G VRF E A A Sbjct: 512 KGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEI-KMENGKSKGCGTVRFESAESAEKAC 570 Query: 277 RQKNGVELQGKRLAVDLSLDQD 342 R NG+++ G+ +D+ LD++ Sbjct: 571 RIMNGIKISGRE--IDVRLDRN 590 Score = 35.0 bits (79), Expect = 1.6 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIF-STCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQK 285 VF+ +P ++++ GE+ + + KD G S+G G V F + E A Sbjct: 93 VFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETM 152 Query: 286 NGVELQGKRLAV 321 N +L G+ L + Sbjct: 153 NKYDLSGRPLNI 164 Score = 34.7 bits (78), Expect = 2.1 Identities = 21/64 (32%), Positives = 31/64 (48%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKR 279 G+ +FV L L+E+FS G + I +D++G S+G G V F + A A Sbjct: 223 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS 282 Query: 280 QKNG 291 NG Sbjct: 283 MFNG 286
>Q4PC17:MRD1_USTMA Multiple RNA-binding domain-containing protein 1 - Ustilago maydis| (Smut fungus) Length = 858 Score = 56.6 bits (135), Expect = 5e-07 Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 11/256 (4%) Frame = +1 Query: 31 EEPKMDRRAASHGDYDEQ--DRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 ++ +M R+A + D++ D+ ++ +F+ LP +A+ + F + G + + I Sbjct: 288 KQAEMQRKAQQAAEKDQKLVDQIMESGRLFIRNLPFAASGDEILAFFESFGTVKQVHIPL 347 Query: 205 D-QNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSA 381 D Q SKG FV F++ A A R K+G QG+ L + ++++D L K + Sbjct: 348 DKQTKASKGLAFVSFSDPAHALAAYRAKDGSTFQGRLLHLLPAVNKDALAETGSKKTATL 407 Query: 382 EE--FEELIHKTFKDVISVDLAMAPNLDSSTSKRRL--NRGFAFVRFSSHGAAARVLRIG 549 ++ E+ KD L M+ + +S+ RL N+ ++ GA +R+ Sbjct: 408 KQARAEQKKQDATKDFNWSMLYMSSDAVASSIADRLGVNKSDILNPGANGGADNAAVRLA 467 Query: 550 SRTDFMLGGILHPAINWTERESNVDADEMAK----IRTAFVGNLPANANEDYLKKLFGRF 717 + I ++ NVDA + AK T V N+P + + ++KLFG Sbjct: 468 LAETRI---IQETKEFLAQQGINVDAFQGAKGPRSDTTILVKNIPYGTSAEEVEKLFGEH 524 Query: 718 GEVIRVAVSRKGQYPV 765 GEV +V + G V Sbjct: 525 GEVDKVLIPPSGTIAV 540 Score = 46.6 bits (109), Expect = 5e-04 Identities = 24/76 (31%), Positives = 42/76 (55%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQ 282 + + V GLP T+ LRE FS G + D+++M+ +G S+ FGFV + + A A Sbjct: 2 SRLIVRGLPSYLTDARLREHFSQKGAVTDVKLMRRPDGTSRKFGFVGYRSEQEAQQALDY 61 Query: 283 KNGVELQGKRLAVDLS 330 N + R++++L+ Sbjct: 62 FNRTFIDTSRISIELA 77 Score = 42.4 bits (98), Expect = 0.010 Identities = 21/75 (28%), Positives = 40/75 (53%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQK 285 ++ + LP AT+ +R++FS+ G++ +R+ K + ++GFGFV ++ A A Sbjct: 720 KILIKNLPFEATKRDIRDLFSSQGQLKSVRLPKKFDNTTRGFGFVEYSTVREAQSAMEAL 779 Query: 286 NGVELQGKRLAVDLS 330 L G+ L + S Sbjct: 780 KHTHLLGRHLVLQWS 794
>Q8C5L7:RBM34_MOUSE RNA-binding protein 34 - Mus musculus (Mouse)| Length = 375 Score = 56.2 bits (134), Expect = 7e-07 Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 VFVG LP + L E F CG IV +RI+++ GV +GFG+V F + ++A + Sbjct: 293 VFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLN 352 Query: 286 NGVELQGKRLAVDLSLDQDTL 348 N EL G++L V S++++ L Sbjct: 353 NS-ELMGRKLRVMRSVNKEKL 372 Score = 35.4 bits (80), Expect = 1.2 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +1 Query: 616 NVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEV 726 N + + + RT FVGNLP N+ LK F +G+V Sbjct: 179 NPEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQV 215
>P42696:RBM34_HUMAN RNA-binding protein 34 - Homo sapiens (Human)| Length = 430 Score = 56.2 bits (134), Expect = 7e-07 Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 VFVG LP E + + F CG I+ +RI++D+ G+ KGFG+V F + ++A + Sbjct: 289 VFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLN 348 Query: 286 NGVELQGKRLAVDLSLDQD 342 N EL G++L V S++++ Sbjct: 349 NS-ELMGRKLRVMRSVNKE 366 Score = 41.2 bits (95), Expect = 0.022 Identities = 64/262 (24%), Positives = 107/262 (40%), Gaps = 32/262 (12%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLR--------------------- 195 E++R VFVG LP + + L+ F G+I +R Sbjct: 177 EEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRK 236 Query: 196 IMKDQNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDL-----SLDQDTLFFGN 360 I DQ ++ +V F E A A ++ G R+ VDL S D+ ++F GN Sbjct: 237 IHPDQKNIN---AYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRSVFVGN 293 Query: 361 LCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 L + E E I K F D S+ +A+ D T + +GF +V F + + L Sbjct: 294 L--PYKVE--ESAIEKHFLDCGSI-MAVRIVRDKMTG---IGKGFGYVLFENTDSVHLAL 345 Query: 541 RIGSRTDFMLGGILH--PAIN---WTERESNVDADEMAKIRTAFVGNLPANANEDYLKKL 705 ++ + ++G L ++N + ++ SN ++K + N + E + K L Sbjct: 346 KLNNSE--LMGRKLRVMRSVNKEKFKQQNSNPRLKNVSKPKQGL--NFTSKTAEGHPKSL 401 Query: 706 FGRFGE-VIRVAVSRKGQYPVG 768 F GE + + +KGQ G Sbjct: 402 F--IGEKAVLLKTKKKGQKKSG 421 Score = 35.0 bits (79), Expect = 1.6 Identities = 48/239 (20%), Positives = 98/239 (41%), Gaps = 16/239 (6%) Frame = +1 Query: 250 ERECAYIAKRQKNGVELQGKRLAVDLSLDQDTLFFGNL---CKEWSAE----EFEELIHK 408 + E +++R+K + + +RL ++ T+F GNL C + + E+ ++ Sbjct: 160 DTEDTVVSQRKKIQINQEEERLK-----NERTVFVGNLPVTCNKKKLKSFFKEYGQIESV 214 Query: 409 TFKDVISVDLAMAPNLDSSTSK-----RRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLG 573 F+ +I + ++ L + K + +N A+V F AA + L+ R + Sbjct: 215 RFRSLIPAEGTLSKKLAAIKRKIHPDQKNIN---AYVVFKEESAATQALK---RNGAQIA 268 Query: 574 GILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKG 753 ++ S+ D R+ FVGNLP E ++K F G ++ V + R Sbjct: 269 DGFRIRVDLASETSSRDK------RSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDK 322 Query: 754 QYPV----GFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNKRSR 918 + G++ F + + A+K + + + G ++ SV + + N R Sbjct: 323 MTGIGKGFGYVLFENTDSVHLALKLNNSELM-----GRKLRVMRSVNKEKFKQQNSNPR 376
>P26378:ELAV4_HUMAN ELAV-like protein 4 - Homo sapiens (Human)| Length = 380 Score = 56.2 bits (134), Expect = 7e-07 Identities = 70/277 (25%), Positives = 116/277 (41%), Gaps = 20/277 (7%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYI 270 ++ A ++V GLP++ T+ L ++FS G I+ RI+ DQ GVS+G GF+RF +R A Sbjct: 129 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 188 Query: 271 AKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAP 450 A + NG + G + + T+ F N + S++ +++ S + Sbjct: 189 AIKGLNGQKPSG-------ATEPITVKFANNPSQKSSQALLSQLYQ------SPNRRYPG 235 Query: 451 NLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDAD 630 L + RL+ +L + ++ G + P+ + R S + D Sbjct: 236 PLHHQAQRFRLD---------------NLLNMAYGVKRLMSGPVPPSA-CSPRFSPITID 279 Query: 631 EMAKI------------RTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------KG 753 M + FV NL +++E L +LFG FG V V V R KG Sbjct: 280 GMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKG 339 Query: 754 QYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 GF+ + E AI ++G + SFK Sbjct: 340 ---FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFK 373 Score = 52.8 bits (125), Expect = 7e-06 Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 7/152 (4%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 + V LP++ T+ R +F + GEI ++++D+ G S G+GFV + + + A A Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107 Query: 286 NGVELQGKRLAV------DLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 NG+ LQ K + V S+ L+ L K + +E E+L + + + S L Sbjct: 108 NGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL--- 164 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR 543 +D T ++RG F+RF A ++ Sbjct: 165 --VDQVTG---VSRGVGFIRFDKRIEAEEAIK 191 Score = 40.0 bits (92), Expect = 0.049 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 14/106 (13%) Frame = +1 Query: 637 AKIRTA--FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VGFIHFGSRSEL 798 A IR A +V LP + L++LF ++G +I R+ V + VGFI F R E Sbjct: 127 ASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEA 186 Query: 799 DNAIKEMDGKTVSGPN--------RGPSFKIQVSVARPAVENDNKR 912 + AIK ++G+ SG PS K ++ ++ N+R Sbjct: 187 EEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 232 Score = 35.8 bits (81), Expect = 0.93 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 +FV L + E L ++F G + ++++++D N KGFGFV + A +A Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358 Query: 286 NGVELQGKRLAVDLSLDQ 339 NG L + L V ++ Sbjct: 359 NGYRLGDRVLQVSFKTNK 376
>Q9P2K5:MYEF2_HUMAN Myelin expression factor 2 - Homo sapiens (Human)| Length = 600 Score = 55.8 bits (133), Expect = 9e-07 Identities = 34/82 (41%), Positives = 48/82 (58%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 KG ++FV LP T L+E FS CG ++ I K +NG SKG G VRF E A A Sbjct: 521 KGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEI-KMENGKSKGCGTVRFDSPESAEKAC 579 Query: 277 RQKNGVELQGKRLAVDLSLDQD 342 R NG+++ G+ +D+ LD++ Sbjct: 580 RIMNGIKISGRE--IDVRLDRN 599 Score = 35.0 bits (79), Expect = 1.6 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIF-STCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQK 285 VF+ +P ++++ GE+ + + KD G S+G G V F + E A Sbjct: 102 VFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETM 161 Query: 286 NGVELQGKRLAV 321 N +L G+ L + Sbjct: 162 NKYDLSGRPLNI 173 Score = 34.7 bits (78), Expect = 2.1 Identities = 21/64 (32%), Positives = 31/64 (48%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKR 279 G+ +FV L L+E+FS G + I +D++G S+G G V F + A A Sbjct: 232 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS 291 Query: 280 QKNG 291 NG Sbjct: 292 MFNG 295
>P32588:PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 453 Score = 55.5 bits (132), Expect = 1e-06 Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 11/188 (5%) Frame = +1 Query: 88 RRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAY 267 R ++VG L ++ TE L++ F G I +++IM D+N + + FV + + A Sbjct: 70 RETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDAN 129 Query: 268 IAKRQKNGVELQGKRLAVDLSL--------DQDTLFFGNLCKEWSAEEFEELIHKTFKDV 423 IA + NG +++ + ++ + D LF G+L + +E + FKD Sbjct: 130 IALQTLNGKQIENNIVKINWAFQSQQSSSDDTFNLFVGDL----NVNVDDETLRNAFKDF 185 Query: 424 ISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHP---AI 594 S L+ D T +RG+ FV F+S A + D M G L+ I Sbjct: 186 PSY-LSGHVMWDMQTGS---SRGYGFVSFTSQDDAQNAM------DSMQGQDLNGRPLRI 235 Query: 595 NWTERESN 618 NW + N Sbjct: 236 NWAAKRDN 243
>P32831:NGR1_YEAST Negative growth regulatory protein NGR1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 672 Score = 55.5 bits (132), Expect = 1e-06 Identities = 65/271 (23%), Positives = 113/271 (41%), Gaps = 2/271 (0%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVD-LRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQ 282 +FVG L +ATE L +F T + V +R+M D G S+ FGFVRF + + A + Sbjct: 194 LFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIE 253 Query: 283 KNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDS 462 +G QG+ L V + ++ + + + ++ ++ + + + + D P L Sbjct: 254 MSGKWFQGRALRVAYATPRNNM----MLQLQEQQQQQQQLQQQHQQLDQED-NNGPLLIK 308 Query: 463 STSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAK 642 + + N + H A L G ++ + L P+ + +N Sbjct: 309 TANNLIQNNSNMLPLNALHNAPPMHLNEGGISNMRVNDSL-PSNTYNTDPTNT------- 360 Query: 643 IRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYPVGFIHFGSRSELDNAIKEMD 822 T FVG L E L+ LF FG ++ V + GF+ F R + + +I+ + Sbjct: 361 --TVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKN--CGFVKFEKRIDAEASIQGLQ 416 Query: 823 GKTVSGPNRGPSFKIQVSVARPAVENDNKRS 915 G V G I++S RP+ N S Sbjct: 417 GFIVGGS------PIRLSWGRPSSSNAKTNS 441
>O09032:ELAV4_RAT ELAV-like protein 4 - Rattus norvegicus (Rat)| Length = 373 Score = 55.5 bits (132), Expect = 1e-06 Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 20/277 (7%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYI 270 ++ A ++V GLP++ T+ L ++FS G I+ RI+ DQ GVS+G GF+RF +R A Sbjct: 122 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 181 Query: 271 AKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAP 450 A + NG + G + + T+ F N + S++ +++ S + Sbjct: 182 AIKGLNGQKPSG-------ATEPITVKFANNPSQKSSQALLSQLYQ------SPNRRYPG 228 Query: 451 NLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDAD 630 L + RL+ +L + ++ G + P+ R S + D Sbjct: 229 PLHHQAQRFRLD---------------NLLNMAYGVKRLMSGPVPPSA-CPPRFSPITID 272 Query: 631 EMAKI------------RTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------KG 753 M + FV NL +++E L +LFG FG V V V R KG Sbjct: 273 GMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKG 332 Query: 754 QYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 GF+ + E AI ++G + SFK Sbjct: 333 ---FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFK 366 Score = 52.8 bits (125), Expect = 7e-06 Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 7/152 (4%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 + V LP++ T+ R +F + GEI ++++D+ G S G+GFV + + + A A Sbjct: 41 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 286 NGVELQGKRLAV------DLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 NG+ LQ K + V S+ L+ L K + +E E+L + + + S L Sbjct: 101 NGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL--- 157 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR 543 +D T ++RG F+RF A ++ Sbjct: 158 --VDQVTG---VSRGVGFIRFDKRIEAEEAIK 184 Score = 40.0 bits (92), Expect = 0.049 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 14/106 (13%) Frame = +1 Query: 637 AKIRTA--FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VGFIHFGSRSEL 798 A IR A +V LP + L++LF ++G +I R+ V + VGFI F R E Sbjct: 120 ASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEA 179 Query: 799 DNAIKEMDGKTVSGPN--------RGPSFKIQVSVARPAVENDNKR 912 + AIK ++G+ SG PS K ++ ++ N+R Sbjct: 180 EEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 225 Score = 35.8 bits (81), Expect = 0.93 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 +FV L + E L ++F G + ++++++D N KGFGFV + A +A Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351 Query: 286 NGVELQGKRLAVDLSLDQ 339 NG L + L V ++ Sbjct: 352 NGYRLGDRVLQVSFKTNK 369
>Q61701:ELAV4_MOUSE ELAV-like protein 4 - Mus musculus (Mouse)| Length = 385 Score = 55.5 bits (132), Expect = 1e-06 Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 20/277 (7%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYI 270 ++ A ++V GLP++ T+ L ++FS G I+ RI+ DQ GVS+G GF+RF +R A Sbjct: 134 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 193 Query: 271 AKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAP 450 A + NG + G + + T+ F N + S++ +++ S + Sbjct: 194 AIKGLNGQKPSG-------ATEPITVKFANNPSQKSSQALLSQLYQ------SPNRRYPG 240 Query: 451 NLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDAD 630 L + RL+ +L + ++ G + P+ R S + D Sbjct: 241 PLHHQAQRFRLD---------------NLLNMAYGVKRLMSGPVPPSA-CPPRFSPITID 284 Query: 631 EMAKI------------RTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------KG 753 M + FV NL +++E L +LFG FG V V V R KG Sbjct: 285 GMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKG 344 Query: 754 QYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 GF+ + E AI ++G + SFK Sbjct: 345 ---FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFK 378 Score = 52.8 bits (125), Expect = 7e-06 Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 7/152 (4%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 + V LP++ T+ R +F + GEI ++++D+ G S G+GFV + + + A A Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112 Query: 286 NGVELQGKRLAV------DLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 NG+ LQ K + V S+ L+ L K + +E E+L + + + S L Sbjct: 113 NGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL--- 169 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR 543 +D T ++RG F+RF A ++ Sbjct: 170 --VDQVTG---VSRGVGFIRFDKRIEAEEAIK 196 Score = 40.0 bits (92), Expect = 0.049 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 14/106 (13%) Frame = +1 Query: 637 AKIRTA--FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VGFIHFGSRSEL 798 A IR A +V LP + L++LF ++G +I R+ V + VGFI F R E Sbjct: 132 ASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEA 191 Query: 799 DNAIKEMDGKTVSGPN--------RGPSFKIQVSVARPAVENDNKR 912 + AIK ++G+ SG PS K ++ ++ N+R Sbjct: 192 EEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 237 Score = 35.8 bits (81), Expect = 0.93 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 +FV L + E L ++F G + ++++++D N KGFGFV + A +A Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363 Query: 286 NGVELQGKRLAVDLSLDQ 339 NG L + L V ++ Sbjct: 364 NGYRLGDRVLQVSFKTNK 381
>Q4R535:CELF4_MACFA CUG-BP- and ETR-3-like factor 4 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 474 Score = 55.5 bits (132), Expect = 1e-06 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 10/161 (6%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQ 282 ++F+G +PR+ E L+ +F G+I +L ++KD+ G+ KG F+ + ERE A A+ Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114 Query: 283 KNGVE-LQGKRLAVDL------SLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLA 441 + + L G + + S LF G L K+ S ++ L + F ++ + Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGDRKLFVGMLNKQQSEDDVRRLF-EAFGNIEECTIL 173 Query: 442 MAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI--GSRT 558 P+ +S +G AFV++SSH A + GS+T Sbjct: 174 RGPDGNS--------KGCAFVKYSSHAEAQAAINALHGSQT 206 Score = 33.1 bits (74), Expect = 6.0 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 7/92 (7%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------KGQYPVGFIHFGSRSELDNAIK 813 F+G +P N +E LK LF FG++ + V + KG + + S + +A+ Sbjct: 57 FIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALH 116 Query: 814 EMDGKTVSGPNRGPSFKIQVSVARPAVENDNK 909 E KT+ G NR IQV A D K Sbjct: 117 EQ--KTLPGMNR----PIQVKPADSESRGDRK 142
>O60176:YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c - Schizosaccharomyces| pombe (Fission yeast) Length = 473 Score = 54.7 bits (130), Expect = 2e-06 Identities = 67/314 (21%), Positives = 125/314 (39%), Gaps = 41/314 (13%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 +++G L TE ++++++T G+ V +++++++ G++ G+ FV FA A A Sbjct: 95 LWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAMSMN 154 Query: 286 N----------------GVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFK 417 N G L+ K ++ + ++F G+L + + L + Sbjct: 155 NKPIPGTNHLFKLNWASGGGLREKSIS---KASEYSIFVGDLSPNVNEFDVYSLFASRYN 211 Query: 418 DVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHG-------------AAARVLRIGSRT 558 S + P + S RG+ FVRF+ R +R+G T Sbjct: 212 SCKSAKIMTDPQTNVS-------RGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLAT 264 Query: 559 DFMLGGILHPA---------INWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFG 711 + P + + V T FVG L +E+ LK LF Sbjct: 265 PKSKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQ 324 Query: 712 RFGEVIRVAV-SRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSF-KIQVSVAR 885 FGE++ V + KG GF+ F +R + AI ++ G + S+ + Q +A Sbjct: 325 NFGEIVYVKIPPGKG---CGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRNQNPIAA 381 Query: 886 PAVENDNKRSREEV 927 PA+ ++ S+ + Sbjct: 382 PALNYQSQVSQTTI 395
>Q60900:ELAV3_MOUSE ELAV-like protein 3 - Mus musculus (Mouse)| Length = 367 Score = 54.7 bits (130), Expect = 2e-06 Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 + V LP++ T+ + +F + G+I ++++D+ G S G+GFV +++ A A Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100 Query: 286 NGVELQGKRLAV------DLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 NG++LQ K + V S+ L+ L K S +E E+L + + + S L Sbjct: 101 NGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRIL--- 157 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR 543 LD +T ++RG F+RF A ++ Sbjct: 158 --LDQATG---VSRGVGFIRFDKRIEAEEAIK 184 Score = 53.1 bits (126), Expect = 6e-06 Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 8/252 (3%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYI 270 ++ A ++V GLP++ ++ + ++FS G I+ RI+ DQ GVS+G GF+RF +R A Sbjct: 122 IRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEE 181 Query: 271 AKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAP 450 A + NG + G + + T+ F N + + + +++ S A Sbjct: 182 AIKGLNGQKPLG-------AAEPITVKFANNPSQKTGQALLTHLYQ------SSARRYAG 228 Query: 451 NLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDAD 630 L T + RL+ + ++G + + I + + G+ A + Sbjct: 229 PLHHQTQRFRLDN----LLNMAYGVKSPLSLIARFSPIAIDGMSGLA------GVGLSGG 278 Query: 631 EMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------KGQYPVGFIHFGSR 789 FV NL A+E L +LFG FG V V V R KG GF+ + Sbjct: 279 AAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKG---FGFVTMTNY 335 Query: 790 SELDNAIKEMDG 825 E AI ++G Sbjct: 336 DEAAMAIASLNG 347 Score = 36.2 bits (82), Expect = 0.71 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 10/78 (12%) Frame = +1 Query: 637 AKIRTA--FVGNLPANANEDYLKKLFGRFGEVIR--------VAVSRKGQYPVGFIHFGS 786 A IR A +V LP ++ +++LF ++G +I VSR VGFI F Sbjct: 120 ASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRG----VGFIRFDK 175 Query: 787 RSELDNAIKEMDGKTVSG 840 R E + AIK ++G+ G Sbjct: 176 RIEAEEAIKGLNGQKPLG 193 Score = 35.8 bits (81), Expect = 0.93 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 +FV L A E L ++F G + ++++++D KGFGFV + A +A Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 286 NGVELQGKRLAV 321 NG L + L V Sbjct: 346 NGYRLGERVLQV 357 Score = 35.4 bits (80), Expect = 1.2 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = +1 Query: 658 VGNLPANANEDYLKKLFGRFGEVIRVAVSR---KGQ-YPVGFIHFGSRSELDNAIKEMDG 825 V LP N +D K LFG G++ + R GQ GF+++ ++ D AI ++G Sbjct: 43 VNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNG 102 Query: 826 KTVSGPNRGPSFKIQVSVARPA 891 + + I+VS ARP+ Sbjct: 103 LKLQ------TKTIKVSYARPS 118
>Q98SJ2:DAZP1_XENLA DAZ-associated protein 1 - Xenopus laevis (African clawed frog)| Length = 360 Score = 54.7 bits (130), Expect = 2e-06 Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAEREC 261 ++FVGGL S T+ TLR FS GE+VD IMKD+ S+GFGFV+F + C Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 63 Score = 44.3 bits (103), Expect = 0.003 Identities = 38/128 (29%), Positives = 51/128 (39%), Gaps = 19/128 (14%) Frame = +1 Query: 484 NRGFAFVRFSSHGAAARVLRIGSRTDFMLGGIL---------------HPAINWTERESN 618 +RGF FV+F VL SR + G + P W ++E Sbjct: 50 SRGFGFVKFKDPNCVGTVL--ASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPR 107 Query: 619 VDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAV--SRKGQYP--VGFIHFGS 786 + KI FVG +P N E LK+ F RFG V V + + Q P GFI F Sbjct: 108 TENSRSNKI---FVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFED 164 Query: 787 RSELDNAI 810 +D A+ Sbjct: 165 EQSVDQAV 172 Score = 38.9 bits (89), Expect = 0.11 Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 1/108 (0%) Frame = +1 Query: 25 RREEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 R +P+ R + + + ++FVGG+P + E L+E F+ G + ++ ++ Sbjct: 88 RGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIY 147 Query: 205 D-QNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDT 345 D + +GFGF+ F + + A + ++ GK++ V + +D+ Sbjct: 148 DAEKQRPRGFGFITFEDEQSVDQAVNM-HFHDIMGKKVEVKRAEPRDS 194
>Q9JII5:DAZP1_MOUSE DAZ-associated protein 1 - Mus musculus (Mouse)| Length = 406 Score = 54.7 bits (130), Expect = 2e-06 Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAEREC 261 ++FVGGL S T+ TLR FS GE+VD IMKD+ S+GFGFV+F + C Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 63 Score = 39.3 bits (90), Expect = 0.084 Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 1/84 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 K ++FVGG+P + E LRE F G + ++ ++ D + +GFGF+ F + + A Sbjct: 111 KSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 170 Query: 274 KRQKNGVELQGKRLAVDLSLDQDT 345 + ++ GK++ V + +D+ Sbjct: 171 VNM-HFHDIMGKKVEVKRAEPRDS 193 Score = 36.6 bits (83), Expect = 0.55 Identities = 34/124 (27%), Positives = 48/124 (38%), Gaps = 15/124 (12%) Frame = +1 Query: 484 NRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPA-----------INWTERESNVDAD 630 +RGF FV+F VL SR + G + P E Sbjct: 50 SRGFGFVKFKDPNCVGTVL--ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRS 107 Query: 631 EMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAV--SRKGQYP--VGFIHFGSRSEL 798 + +K FVG +P N E L++ F +FG V V + + Q P GFI F + Sbjct: 108 DSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV 167 Query: 799 DNAI 810 D A+ Sbjct: 168 DQAV 171
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 54.7 bits (130), Expect = 2e-06 Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAEREC 261 ++FVGGL S T+ TLR FS GE+VD IMKD+ S+GFGFV+F + C Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 63 Score = 39.3 bits (90), Expect = 0.084 Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 1/84 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 K ++FVGG+P + E LRE F G + ++ ++ D + +GFGF+ F + + A Sbjct: 111 KSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 170 Query: 274 KRQKNGVELQGKRLAVDLSLDQDT 345 + ++ GK++ V + +D+ Sbjct: 171 VNM-HFHDIMGKKVEVKRAEPRDS 193 Score = 36.2 bits (82), Expect = 0.71 Identities = 34/124 (27%), Positives = 48/124 (38%), Gaps = 15/124 (12%) Frame = +1 Query: 484 NRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPA-----------INWTERESNVDAD 630 +RGF FV+F VL SR + G + P E Sbjct: 50 SRGFGFVKFKDPNCVGTVL--ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRS 107 Query: 631 EMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAV--SRKGQYP--VGFIHFGSRSEL 798 + +K FVG +P N E L++ F +FG V V + + Q P GFI F + Sbjct: 108 DNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV 167 Query: 799 DNAI 810 D A+ Sbjct: 168 DQAV 171
>P16914:ELAV_DROME Protein elav - Drosophila melanogaster (Fruit fly)| Length = 483 Score = 54.3 bits (129), Expect = 3e-06 Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 20/192 (10%) Frame = +1 Query: 25 RREEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 ++ +P + A S + V LP++ TE +R +FS+ GEI +++++ Sbjct: 123 QQAQPNTNGNAGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIR 182 Query: 205 DQN--------------GVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDL----- 327 D++ G S G+GFV + + A A NG+ LQ K + V Sbjct: 183 DKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSS 242 Query: 328 -SLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFV 504 ++ L+ L K + +E E I F +I+ + D+ T +G F+ Sbjct: 243 DAIKGANLYVSGLPKTMTQQEL-EAIFAPFGAIITSRILQNAGNDTQT------KGVGFI 295 Query: 505 RFSSHGAAARVL 540 RF A R + Sbjct: 296 RFDKREEATRAI 307 Score = 50.8 bits (120), Expect = 3e-05 Identities = 69/267 (25%), Positives = 104/267 (38%), Gaps = 10/267 (3%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD--QNGVSKGFGFVRFAERECAY 267 +KGA ++V GLP++ T+ L IF+ G I+ RI+++ + +KG GF+RF +RE A Sbjct: 245 IKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEAT 304 Query: 268 IAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 A NG + C + +F T K + Sbjct: 305 RAIIALNGTT-------------------PSSCTDPIVVKFSNTPGSTSK-------IIQ 338 Query: 448 PNLDSSTSKRRLNR-GFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVD 624 P L + + + + R G A + G A G D ML L A + Sbjct: 339 PQLPAFLNPQLVRRIGGAMHTPVNKGLARFSPMAGDMLDVMLPNGLGAA----AAAATTL 394 Query: 625 ADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------KGQYPVGFIHFG 783 A F+ NL E L +LFG FG V V + + KG GF+ Sbjct: 395 ASGPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKG---YGFVSMT 451 Query: 784 SRSELDNAIKEMDGKTVSGPNRGPSFK 864 + E AI+ ++G T+ SFK Sbjct: 452 NYDEAAMAIRALNGYTMGNRVLQVSFK 478 Score = 35.0 bits (79), Expect = 1.6 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 +F+ L E L ++F G + ++I+KD KG+GFV + A +A R Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 463 Query: 286 NGVELQGKRLAVDLSLDQ 339 NG + + L V ++ Sbjct: 464 NGYTMGNRVLQVSFKTNK 481
>O01671:SXL_MEGSC Sex-lethal homolog - Megaselia scalaris| Length = 321 Score = 53.9 bits (128), Expect = 3e-06 Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 7/154 (4%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAK 276 G + V LP+ + L +F T G I RIM+D + G S G+GFV F A A Sbjct: 77 GTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAI 136 Query: 277 RQKNGVELQGKRLAVDLS------LDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDL 438 NG+ ++ KR+ V + L L+ NL + + E+ E + K + ++ ++ Sbjct: 137 NNLNGITVRNKRIKVSFARPGGEQLRDTNLYVTNLSRSITDEQLETIFGK-YGQIVQKNI 195 Query: 439 AMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 D T RG AF+RF+ A + Sbjct: 196 LR----DKHTG---TPRGVAFIRFNKREEAQEAI 222 Score = 35.4 bits (80), Expect = 1.2 Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 9/131 (6%) Frame = +1 Query: 658 VGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ----YPVGFIHFGSRSELDNAIKEMDG 825 V LP + + L LF G + + R + Y GF+ FGS ++ AI ++G Sbjct: 82 VNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNG 141 Query: 826 KTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGRYG-----H 990 TV +I+VS ARP E + RS ++ + + G+YG + Sbjct: 142 ITVRNK------RIKVSFARPGGEQLRDTNLYVTNLSRS-ITDEQLETIFGKYGQIVQKN 194 Query: 991 DSLDRQTKAPR 1023 D+ T PR Sbjct: 195 ILRDKHTGTPR 205
>P52756:RBM5_HUMAN RNA-binding protein 5 - Homo sapiens (Human)| Length = 815 Score = 53.9 bits (128), Expect = 3e-06 Identities = 69/262 (26%), Positives = 107/262 (40%), Gaps = 56/262 (21%) Frame = +1 Query: 25 RREEPKMDRRAASHGDYDEQDRRV------KGAEVFVGGLPRSATEGTLREIFSTCG--E 180 RR + + S GDY E D R + + + GLP + TE +RE+ + + Sbjct: 66 RRNSDRSEDGYHSDGDYGEHDYRHDISDERESKTIMLRGLPITITESDIREMMESFEGPQ 125 Query: 181 IVDLRIMKDQNGVSKGFGFVRFAERECA--YIAKRQKNGVELQGKRLAVDLSLDQDTLFF 354 D+R+MK + GVS+GF FV F + A ++ QK V +QGK +A+ S + F Sbjct: 126 PADVRLMKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLV-IQGKHIAMHYS-NPRPKFE 183 Query: 355 GNLCKEWSAEEF-----------------EELIHKTFKDVISVD---------------- 435 LC + F +E+ T + V SVD Sbjct: 184 DWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSVDYYCDTIILRNIAPHTV 243 Query: 436 -----LAMAPNLDSSTSKRRL--------NRGFAFVRFSSHGAAARVLRIGSRTDFMLGG 576 A++P + + RL NRGFAFV+ SS A+++L+I Sbjct: 244 VDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQS------- 296 Query: 577 ILHPAINWTERESNVDADEMAK 642 LHP + + VD + A+ Sbjct: 297 -LHPPLKIDGKTIGVDFAKSAR 317
>Q1RMU5:RBM5_BOVIN RNA-binding protein 5 - Bos taurus (Bovine)| Length = 815 Score = 53.9 bits (128), Expect = 3e-06 Identities = 69/262 (26%), Positives = 107/262 (40%), Gaps = 56/262 (21%) Frame = +1 Query: 25 RREEPKMDRRAASHGDYDEQDRRV------KGAEVFVGGLPRSATEGTLREIFSTCG--E 180 RR + + S GDY E D R + + + GLP + TE +RE+ + + Sbjct: 66 RRNSDRSEDGYHSDGDYGEHDYRHDISDERESKTIMLRGLPITITESDIREMMESFEGPQ 125 Query: 181 IVDLRIMKDQNGVSKGFGFVRFAERECA--YIAKRQKNGVELQGKRLAVDLSLDQDTLFF 354 D+R+MK + GVS+GF FV F + A ++ QK V +QGK +A+ S + F Sbjct: 126 PADVRLMKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLV-IQGKHIAMHYS-NPRPKFE 183 Query: 355 GNLCKEWSAEEF-----------------EELIHKTFKDVISVD---------------- 435 LC + F +E+ T + V SVD Sbjct: 184 DWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSVDYYCDTIILRNIAPHTV 243 Query: 436 -----LAMAPNLDSSTSKRRL--------NRGFAFVRFSSHGAAARVLRIGSRTDFMLGG 576 A++P + + RL NRGFAFV+ SS A+++L+I Sbjct: 244 VDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQS------- 296 Query: 577 ILHPAINWTERESNVDADEMAK 642 LHP + + VD + A+ Sbjct: 297 -LHPPLKIDGKTIGVDFAKSAR 317
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 53.9 bits (128), Expect = 3e-06 Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGV-SKGFGFVRFAERECAYIAKRQ 282 ++FVGGL + E L + FS+ G I ++ ++KD+ S+GFGF+ F E A +A R Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66 Query: 283 KNGVELQGKRLAVD 324 NG L G+++ VD Sbjct: 67 MNGESLDGRQIRVD 80
>Q3SWU3:HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-like - Rattus norvegicus| (Rat) Length = 322 Score = 53.9 bits (128), Expect = 3e-06 Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 6/180 (3%) Frame = +1 Query: 19 G*RREEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRI 198 G R P + S D G ++F+GGL ++ L E S GE+VD I Sbjct: 23 GAARAAPSLSPSRFSACPLDPSSFPTSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTI 82 Query: 199 MKDQ-NGVSKGFGFVRFAER----ECAYIAKRQKNGVELQGKRL-AVDLSLDQDTLFFGN 360 D G S+GFGFV F + + + + + +G + KR A+ +F G Sbjct: 83 KTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGG 142 Query: 361 LCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 L + S E+ +E F ++ +++L M D+ T++R RGF F+ ++ ++L Sbjct: 143 LSPDTSEEQIKEYF-GAFGEIENIELPM----DTKTNER---RGFCFITYTDEEPVKKLL 194 Score = 41.2 bits (95), Expect = 0.022 Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 2/207 (0%) Frame = +1 Query: 346 LFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGA 525 +F G L + S ++ E + + F +V+ + P S RGF FV F + Sbjct: 53 MFIGGLSWDTSKKDLTEYLSR-FGEVVDCTIKTDPVTGRS-------RGFGFVLFKDAAS 104 Query: 526 AARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKL 705 +VL + + G ++ P +R + E K FVG L + +E+ +K+ Sbjct: 105 VDKVLELKEHK--LDGKLIDP-----KRAKALKGKEPPK--KVFVGGLSPDTSEEQIKEY 155 Query: 706 FGRFGEV--IRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSV 879 FG FGE+ I + + K GF E +K++ S ++ S K ++ V Sbjct: 156 FGAFGEIENIELPMDTKTNERRGFCFITYTDE--EPVKKL---LESRYHQIGSGKCEIKV 210 Query: 880 ARPAVENDNKRSREEVKTRRSNVSGGK 960 A+P + ++ +++ K R +GG+ Sbjct: 211 AQP--KEVYRQQQQQQKGGRGAAAGGR 235
>Q99070:GRP2_SORBI Glycine-rich RNA-binding protein 2 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 168 Score = 53.9 bits (128), Expect = 3e-06 Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = +1 Query: 112 FVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQKN 288 FVGGL + TL + F+ G+++D +++ D + G S+GFGFV F+ + A N Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMN 70 Query: 289 GVELQGKRLAVD 324 G EL G+ + V+ Sbjct: 71 GKELDGRNITVN 82 Score = 38.9 bits (89), Expect = 0.11 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKG--QYPVGFIHFGSRSELDNAIKEMD 822 FVG L N + L++ F FG+VI +V R+ GF+ F S + +AI+ M+ Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMN 70 Query: 823 GKTVSGPN 846 GK + G N Sbjct: 71 GKELDGRN 78
>A0JM51:CELF5_XENTR CUG-BP- and ETR-3-like factor 5 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 486 Score = 53.9 bits (128), Expect = 3e-06 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 11/162 (6%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK-- 276 ++FVG +PR+ E L+ +F G+I +L ++KD+ G+ KG F+ + R+ A A+ Sbjct: 48 KLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTA 107 Query: 277 --RQKN----GVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDL 438 QK +Q K + LF G L K+ S EE + + F + + Sbjct: 108 LHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMF-QAFGSIEECSV 166 Query: 439 AMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI--GSRT 558 P+ S +G AFV+FSSH A ++ GS+T Sbjct: 167 LRGPDGSS--------KGCAFVKFSSHAEAQAAIQALHGSQT 200 Score = 45.8 bits (107), Expect = 0.001 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAER 255 +Q +G +F+ LP+ + L ++F G I+ ++ D+ SK FGFV F Sbjct: 393 QQREGPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNP 452 Query: 256 ECAYIAKRQKNGVELQGKRLAVDLSLDQDT 345 A A + NG ++ KRL V L +DT Sbjct: 453 SSAQTAIQAMNGFQIGMKRLKVQLKRPKDT 482 Score = 35.8 bits (81), Expect = 0.93 Identities = 19/71 (26%), Positives = 36/71 (50%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERE 258 + + R ++FVG L + +E + +F G I + +++ +G SKG FV+F+ Sbjct: 127 DSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSKGCAFVKFSSHA 186 Query: 259 CAYIAKRQKNG 291 A A + +G Sbjct: 187 EAQAAIQALHG 197
>Q792H5:CELF2_RAT CUG-BP- and ETR-3-like factor 2 - Rattus norvegicus (Rat)| Length = 508 Score = 53.9 bits (128), Expect = 3e-06 Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 21/226 (9%) Frame = +1 Query: 55 AASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSK 225 A H D + D ++FVG +PRS +E L+E+F G + + +++D++ SK Sbjct: 28 ALDHSDQPDPD----AIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSK 83 Query: 226 GFGFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEW 375 G FV F R+ A A+ + ++ L G + + +++ LF G + K+ Sbjct: 84 GCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKC 143 Query: 376 SAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSR 555 + + ++ F + + P+ L+RG AFV FS+ A ++ + Sbjct: 144 NENDI-RVMFSPFGQIEECRILRGPD--------GLSRGCAFVTFSTRAMAQNAIKAMHQ 194 Query: 556 TDFMLGGILHPAINWTERESNVD--------ADEMAKIRTAFVGNL 669 + M G + + + + + + A +M ++ TA GNL Sbjct: 195 SQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNL 240 Score = 42.0 bits (97), Expect = 0.013 Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 3/201 (1%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G + + WS +E +EL + + V +++ + + SK G FV F Sbjct: 38 DAIKMFVGQIPRSWSEKELKELF-EPYGAVYQINVLRDRSQNPPQSK-----GCCFVTFY 91 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + AA L G+ HP + ++ + + R F+G + NE+ Sbjct: 92 TRKAALEAQNALHNIK-TLPGMHHPI---QMKPADSEKSNAVEDRKLFIGMVSKKCNEND 147 Query: 694 LKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 ++ +F FG++ + R F+ F +R+ NAIK M S G S Sbjct: 148 IRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH---QSQTMEGCSSP 204 Query: 865 IQVSVARPAVENDNKRSREEV 927 I V A + + +R ++++ Sbjct: 205 IVVKFADTQKDKEQRRLQQQL 225 Score = 42.0 bits (97), Expect = 0.013 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 +GA +F+ LP+ + + ++F G ++ ++ D Q +SK FGFV + A A Sbjct: 421 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 480 Query: 274 KRQKNGVELQGKRLAVDL 327 + NG ++ KRL V L Sbjct: 481 IQAMNGFQIGMKRLKVQL 498
>Q5R8Y8:CELF2_PONPY CUG-BP- and ETR-3-like factor 2 - Pongo pygmaeus (Orangutan)| Length = 508 Score = 53.9 bits (128), Expect = 3e-06 Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 21/226 (9%) Frame = +1 Query: 55 AASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSK 225 A H D + D ++FVG +PRS +E L+E+F G + + +++D++ SK Sbjct: 28 ALDHSDQPDPD----AIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSK 83 Query: 226 GFGFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEW 375 G FV F R+ A A+ + ++ L G + + +++ LF G + K+ Sbjct: 84 GCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKC 143 Query: 376 SAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSR 555 + + ++ F + + P+ L+RG AFV FS+ A ++ + Sbjct: 144 NENDI-RVMFSPFGQIEECRILRGPD--------GLSRGCAFVTFSTRAMAQNAIKAMHQ 194 Query: 556 TDFMLGGILHPAINWTERESNVD--------ADEMAKIRTAFVGNL 669 + M G + + + + + + A +M ++ TA GNL Sbjct: 195 SQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNL 240 Score = 42.0 bits (97), Expect = 0.013 Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 3/201 (1%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G + + WS +E +EL + + V +++ + + SK G FV F Sbjct: 38 DAIKMFVGQIPRSWSEKELKELF-EPYGAVYQINVLRDRSQNPPQSK-----GCCFVTFY 91 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + AA L G+ HP + ++ + + R F+G + NE+ Sbjct: 92 TRKAALEAQNALHNIK-TLPGMHHPI---QMKPADSEKSNAVEDRKLFIGMVSKKCNEND 147 Query: 694 LKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 ++ +F FG++ + R F+ F +R+ NAIK M S G S Sbjct: 148 IRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH---QSQTMEGCSSP 204 Query: 865 IQVSVARPAVENDNKRSREEV 927 I V A + + +R ++++ Sbjct: 205 IVVKFADTQKDKEQRRLQQQL 225 Score = 42.0 bits (97), Expect = 0.013 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 +GA +F+ LP+ + + ++F G ++ ++ D Q +SK FGFV + A A Sbjct: 421 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 480 Query: 274 KRQKNGVELQGKRLAVDL 327 + NG ++ KRL V L Sbjct: 481 IQAMNGFQIGMKRLKVQL 498
>Q9Z0H4:CELF2_MOUSE CUG-BP- and ETR-3-like factor 2 - Mus musculus (Mouse)| Length = 508 Score = 53.9 bits (128), Expect = 3e-06 Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 21/226 (9%) Frame = +1 Query: 55 AASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSK 225 A H D + D ++FVG +PRS +E L+E+F G + + +++D++ SK Sbjct: 28 ALDHSDQPDPD----AIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSK 83 Query: 226 GFGFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEW 375 G FV F R+ A A+ + ++ L G + + +++ LF G + K+ Sbjct: 84 GCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKC 143 Query: 376 SAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSR 555 + + ++ F + + P+ L+RG AFV FS+ A ++ + Sbjct: 144 NENDI-RVMFSPFGQIEECRILRGPD--------GLSRGCAFVTFSTRAMAQNAIKAMHQ 194 Query: 556 TDFMLGGILHPAINWTERESNVD--------ADEMAKIRTAFVGNL 669 + M G + + + + + + A +M ++ TA GNL Sbjct: 195 SQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNL 240 Score = 42.0 bits (97), Expect = 0.013 Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 3/201 (1%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G + + WS +E +EL + + V +++ + + SK G FV F Sbjct: 38 DAIKMFVGQIPRSWSEKELKELF-EPYGAVYQINVLRDRSQNPPQSK-----GCCFVTFY 91 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + AA L G+ HP + ++ + + R F+G + NE+ Sbjct: 92 TRKAALEAQNALHNIK-TLPGMHHPI---QMKPADSEKSNAVEDRKLFIGMVSKKCNEND 147 Query: 694 LKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 ++ +F FG++ + R F+ F +R+ NAIK M S G S Sbjct: 148 IRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH---QSQTMEGCSSP 204 Query: 865 IQVSVARPAVENDNKRSREEV 927 I V A + + +R ++++ Sbjct: 205 IVVKFADTQKDKEQRRLQQQL 225 Score = 42.0 bits (97), Expect = 0.013 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 +GA +F+ LP+ + + ++F G ++ ++ D Q +SK FGFV + A A Sbjct: 421 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 480 Query: 274 KRQKNGVELQGKRLAVDL 327 + NG ++ KRL V L Sbjct: 481 IQAMNGFQIGMKRLKVQL 498
>O95319:CELF2_HUMAN CUG-BP- and ETR-3-like factor 2 - Homo sapiens (Human)| Length = 508 Score = 53.9 bits (128), Expect = 3e-06 Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 21/226 (9%) Frame = +1 Query: 55 AASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSK 225 A H D + D ++FVG +PRS +E L+E+F G + + +++D++ SK Sbjct: 28 ALDHSDQPDPD----AIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSK 83 Query: 226 GFGFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEW 375 G FV F R+ A A+ + ++ L G + + +++ LF G + K+ Sbjct: 84 GCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKC 143 Query: 376 SAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSR 555 + + ++ F + + P+ L+RG AFV FS+ A ++ + Sbjct: 144 NENDI-RVMFSPFGQIEECRILRGPD--------GLSRGCAFVTFSTRAMAQNAIKAMHQ 194 Query: 556 TDFMLGGILHPAINWTERESNVD--------ADEMAKIRTAFVGNL 669 + M G + + + + + + A +M ++ TA GNL Sbjct: 195 SQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNL 240 Score = 42.0 bits (97), Expect = 0.013 Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 3/201 (1%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G + + WS +E +EL + + V +++ + + SK G FV F Sbjct: 38 DAIKMFVGQIPRSWSEKELKELF-EPYGAVYQINVLRDRSQNPPQSK-----GCCFVTFY 91 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + AA L G+ HP + ++ + + R F+G + NE+ Sbjct: 92 TRKAALEAQNALHNIK-TLPGMHHPI---QMKPADSEKSNAVEDRKLFIGMVSKKCNEND 147 Query: 694 LKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 ++ +F FG++ + R F+ F +R+ NAIK M S G S Sbjct: 148 IRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH---QSQTMEGCSSP 204 Query: 865 IQVSVARPAVENDNKRSREEV 927 I V A + + +R ++++ Sbjct: 205 IVVKFADTQKDKEQRRLQQQL 225 Score = 42.0 bits (97), Expect = 0.013 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 +GA +F+ LP+ + + ++F G ++ ++ D Q +SK FGFV + A A Sbjct: 421 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 480 Query: 274 KRQKNGVELQGKRLAVDL 327 + NG ++ KRL V L Sbjct: 481 IQAMNGFQIGMKRLKVQL 498
>Q01085:TIAR_HUMAN Nucleolysin TIAR - Homo sapiens (Human)| Length = 375 Score = 53.5 bits (127), Expect = 4e-06 Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 28/272 (10%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 ++VG L R TE + ++FS G +++ + + + FV F E A A N Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS-NDPYCFVEFYEHRDAAAALAAMN 69 Query: 289 GVELQGKRLAVD-----LSLDQDT-----LFFGNLCKEWSAEEFEELIHKTFKDVISVDL 438 G ++ GK + V+ S +DT +F G+L E + E+ I F + Sbjct: 70 GRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTED----IKSAFAPFGKISD 125 Query: 439 AMAPNLDSSTSKRRLNRGFAFVRF-SSHGAAARVLRIGSRTDFMLGGILHPAINWTERE- 612 A D +T K ++G+ FV F + A ++ +G + LGG NW R+ Sbjct: 126 ARVVK-DMATGK---SKGYGFVSFYNKLDAENAIVHMGGQ---WLGG-RQIRTNWATRKP 177 Query: 613 ----------------SNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVS 744 +V K T + G + + + +++ F FG+++ + V Sbjct: 178 PAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF 237 Query: 745 RKGQYPVGFIHFGSRSELDNAIKEMDGKTVSG 840 + Y F+ F + +AI ++G T+ G Sbjct: 238 PEKGY--SFVRFSTHESAAHAIVSVNGTTIEG 267 Score = 45.1 bits (105), Expect = 0.002 Identities = 23/70 (32%), Positives = 38/70 (54%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 K V+ GG+ T+ +R+ FS G+I+++R+ + KG+ FVRF+ E A A Sbjct: 203 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAI 257 Query: 277 RQKNGVELQG 306 NG ++G Sbjct: 258 VSVNGTTIEG 267 Score = 38.5 bits (88), Expect = 0.14 Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 9/210 (4%) Frame = +1 Query: 343 TLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSH- 519 TL+ GNL ++ + E LI + F + ++ N + FV F H Sbjct: 10 TLYVGNLSRDVT----EVLILQLFSQIGPCKSC------KMITEHTSNDPYCFVEFYEHR 59 Query: 520 GAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLK 699 AAA + + R +LG + +NW S+ D FVG+L + +K Sbjct: 60 DAAAALAAMNGRK--ILGKEVK--VNWATTPSSQKKDTSNHFHV-FVGDLSPEITTEDIK 114 Query: 700 KLFGRFGEVIRVAVSR-------KGQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPS 858 F FG++ V + KG GF+ F ++ + +NAI M G+ + G + Sbjct: 115 SAFAPFGKISDARVVKDMATGKSKGY---GFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 171 Query: 859 FKIQVSVA-RPAVENDNKRSREEVKTRRSN 945 + + A + EN+ K+ R E +S+ Sbjct: 172 WATRKPPAPKSTQENNTKQLRFEDVVNQSS 201
>Q08473:SQD_DROME RNA-binding protein squid - Drosophila melanogaster (Fruit fly)| Length = 344 Score = 53.5 bits (127), Expect = 4e-06 Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 1/167 (0%) Frame = +1 Query: 46 DRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVS 222 D ++A+ G D+ DR++ FVGGL TE LR+ F GEI + + D Q G S Sbjct: 43 DNQSAASGQRDD-DRKL-----FVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRS 96 Query: 223 KGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELI 402 +GF F+ F E + K +F G L E S EE + Sbjct: 97 RGFAFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYF 156 Query: 403 HKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR 543 + F +++ V++ D S+R +GF F+ F S +L+ Sbjct: 157 GQ-FGNIVEVEMP----FDKQKSQR---KGFCFITFDSEQVVTDLLK 195 Score = 38.5 bits (88), Expect = 0.14 Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 7/228 (3%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D LF G L E + +E + K + ++ S+++ P S RGFAF+ F+ Sbjct: 54 DDRKLFVGGLSWETTEKELRDHFGK-YGEIESINVKTDPQTGRS-------RGFAFIVFT 105 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + A +V S D + IN + + KI FVG L +++ Sbjct: 106 NTEAIDKV----SAADEHI-------INSKKVDPKKAKARHGKI---FVGGLTTEISDEE 151 Query: 694 LKKLFGRFGEVIRVAV-------SRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRG 852 +K FG+FG ++ V + RKG FI F S + + +K K ++G Sbjct: 152 IKTYFGQFGNIVEVEMPFDKQKSQRKG---FCFITFDSEQVVTDLLKTPKQK-IAGK--- 204 Query: 853 PSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGRYGHDS 996 +V V R + +N+ R + GG+ Y GR G+++ Sbjct: 205 -----EVDVKRATPKPENQMMGGMRGGPRGGMRGGRGGYG-GRGGYNN 246
>P39697:RT19_ARATH 40S ribosomal protein S19, mitochondrial precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 212 Score = 53.5 bits (127), Expect = 4e-06 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 4/137 (2%) Frame = +1 Query: 91 RVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAY 267 R ++++GGL E +L++ FS+ + + R+M ++ G S+G+GFV F + A Sbjct: 27 RYMSTKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSAN 86 Query: 268 IAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 A NG EL G ++V+++ D +L L + S EE E+ +K + D Sbjct: 87 SAISAMNGQELNGFNISVNVAKDWPSL---PLSLDESIEEAEKKENKMMSRSVWKD---- 139 Query: 448 PNLDSSTSKRR---LNR 489 P +D+ K++ LNR Sbjct: 140 PFVDAFLMKKKNAALNR 156 Score = 34.7 bits (78), Expect = 2.1 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAV------SRKGQYPVGFIHFGSRSELDNAIKE 816 ++G L +E LK F F V V R Y GF++F S ++AI Sbjct: 34 YIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGY--GFVNFISEDSANSAISA 91 Query: 817 MDGKTVSGPNRGPSFKIQVSVAR--PAVENDNKRSREEVKTRRSNV 948 M+G+ ++G F I V+VA+ P++ S EE + + + + Sbjct: 92 MNGQELNG------FNISVNVAKDWPSLPLSLDESIEEAEKKENKM 131
>Q9BX46:RBM24_HUMAN RNA-binding protein 24 - Homo sapiens (Human)| Length = 236 Score = 53.5 bits (127), Expect = 4e-06 Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGLP T+ +LR+ F GEI + ++ D Q G S+G+GFV A+R A A + Sbjct: 12 KIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 283 KNGVELQGKRLAVDLS 330 N + + G++ V+L+ Sbjct: 72 PNPI-IDGRKANVNLA 86
>Q76LC6:RBM24_DANRE RNA-binding protein 24 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 230 Score = 53.5 bits (127), Expect = 4e-06 Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGLP T+ +LR+ F GEI + ++ D Q G S+G+GFV A+R A A + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAADRACKD 71 Query: 283 KNGVELQGKRLAVDLS 330 N + + G++ V+L+ Sbjct: 72 PNPI-IDGRKANVNLA 86 Score = 32.7 bits (73), Expect = 7.9 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ----YPVGFIHFGSRSELDNAIKE 816 FVG LP + + L+K F FGE+ V Q GF+ RS D A K+ Sbjct: 14 FVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAADRACKD 71
>Q7T2T1:CELF2_CHICK CUG-BP- and ETR-3-like factor 2 - Gallus gallus (Chicken)| Length = 484 Score = 53.5 bits (127), Expect = 4e-06 Identities = 51/226 (22%), Positives = 98/226 (43%), Gaps = 21/226 (9%) Frame = +1 Query: 55 AASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSK 225 A H D + D + FVG +PRS +E L+E+F G + + +++D++ SK Sbjct: 4 ALDHSDQPDPD----AIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSK 59 Query: 226 GFGFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEW 375 G FV F R+ A A+ + ++ L G + + +++ LF G + K+ Sbjct: 60 GCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKC 119 Query: 376 SAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSR 555 + + ++ F + + P+ L+RG AFV FS+ A ++ + Sbjct: 120 NENDI-RVMFSPFGQIEECRILRGPD--------GLSRGCAFVTFSTRAMAQNAIKAMHQ 170 Query: 556 TDFMLGGILHPAINWTERESNVD--------ADEMAKIRTAFVGNL 669 + M G + + + + + + A +M ++ TA GNL Sbjct: 171 SQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNL 216 Score = 42.0 bits (97), Expect = 0.013 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 +GA +F+ LP+ + + ++F G ++ ++ D Q +SK FGFV + A A Sbjct: 397 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 456 Query: 274 KRQKNGVELQGKRLAVDL 327 + NG ++ KRL V L Sbjct: 457 IQAMNGFQIGMKRLKVQL 474 Score = 40.8 bits (94), Expect = 0.029 Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 3/196 (1%) Frame = +1 Query: 349 FFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAA 528 F G + + WS +E +EL + + V +++ + + SK G FV F + AA Sbjct: 19 FVGQIPRSWSEKELKELF-EPYGAVYQINVLRDRSQNPPQSK-----GCCFVTFYTRKAA 72 Query: 529 ARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLF 708 L G+ HP + ++ + + R F+G + NE+ ++ +F Sbjct: 73 LEAQNALHNIK-TLPGMHHPI---QMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMF 128 Query: 709 GRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSV 879 FG++ + R F+ F +R+ NAIK M S G S I V Sbjct: 129 SPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH---QSQTMEGCSSPIVVKF 185 Query: 880 ARPAVENDNKRSREEV 927 A + + +R ++++ Sbjct: 186 ADTQKDKEQRRLQQQL 201
>Q03251:GRP8_ARATH Glycine-rich RNA-binding protein 8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 169 Score = 53.1 bits (126), Expect = 6e-06 Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = +1 Query: 112 FVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQKN 288 FVGGL + + L+ FS G+++D +I+ D ++G S+GFGFV F + + A + N Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68 Query: 289 GVELQGKRLAVD 324 G EL G+ + V+ Sbjct: 69 GKELDGRVITVN 80 Score = 37.7 bits (86), Expect = 0.25 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKG--QYPVGFIHFGSRSELDNAIKEMD 822 FVG L N++ L++ F +FG+VI ++ R+ GF+ F + +AI+EM+ Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68 Query: 823 GKTVSG 840 GK + G Sbjct: 69 GKELDG 74
>Q05966:GRP10_BRANA Glycine-rich RNA-binding protein 10 - Brassica napus (Rape)| Length = 169 Score = 53.1 bits (126), Expect = 6e-06 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = +1 Query: 112 FVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQKN 288 FVGGL + + L FS GE++D +I+ D + G S+GFGFV F + + A + N Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68 Query: 289 GVELQGKRLAVD 324 G EL G+ + V+ Sbjct: 69 GKELDGRTITVN 80 Score = 35.0 bits (79), Expect = 1.6 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP----VGFIHFGSRSELDNAIKEMD 822 FVG L + L++ F +FGEVI + + GF+ F + +AI EM+ Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68 Query: 823 GKTVSG 840 GK + G Sbjct: 69 GKELDG 74
>P23241:ELAV_DROVI Protein elav - Drosophila virilis (Fruit fly)| Length = 519 Score = 53.1 bits (126), Expect = 6e-06 Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 20/164 (12%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN--------------GVSKGFGFVRF 246 + V LP++ TE +R +FS+ GEI +++++D++ G S G+GFV + Sbjct: 187 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 246 Query: 247 AERECAYIAKRQKNGVELQGKRLAVDL------SLDQDTLFFGNLCKEWSAEEFEELIHK 408 + A A NG+ LQ K + V ++ L+ L K + +E E I Sbjct: 247 VRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQEL-EAIFA 305 Query: 409 TFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 F +I+ + D+ T +G F+RF A R + Sbjct: 306 PFGAIITSRILQNAGNDTQT------KGVGFIRFDKREEATRAI 343 Score = 50.8 bits (120), Expect = 3e-05 Identities = 69/267 (25%), Positives = 104/267 (38%), Gaps = 10/267 (3%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD--QNGVSKGFGFVRFAERECAY 267 +KGA ++V GLP++ T+ L IF+ G I+ RI+++ + +KG GF+RF +RE A Sbjct: 281 IKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEAT 340 Query: 268 IAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 A NG + C + +F T K + Sbjct: 341 RAIIALNGTT-------------------PSSCTDPIVVKFSNTPGSTSK-------IIQ 374 Query: 448 PNLDSSTSKRRLNR-GFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVD 624 P L + + + + R G A + G A G D ML L A + Sbjct: 375 PQLPAFLNPQLVRRIGGAMHTPVNKGLARFSPMAGDMLDVMLPNGLGAA----AAAATTL 430 Query: 625 ADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------KGQYPVGFIHFG 783 A F+ NL E L +LFG FG V V + + KG GF+ Sbjct: 431 ASGPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKG---YGFVSMT 487 Query: 784 SRSELDNAIKEMDGKTVSGPNRGPSFK 864 + E AI+ ++G T+ SFK Sbjct: 488 NYDEAAMAIRALNGYTMGNRVLQVSFK 514 Score = 35.0 bits (79), Expect = 1.6 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 +F+ L E L ++F G + ++I+KD KG+GFV + A +A R Sbjct: 440 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 499 Query: 286 NGVELQGKRLAVDLSLDQ 339 NG + + L V ++ Sbjct: 500 NGYTMGNRVLQVSFKTNK 517
>Q14576:ELAV3_HUMAN ELAV-like protein 3 - Homo sapiens (Human)| Length = 367 Score = 53.1 bits (126), Expect = 6e-06 Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 8/252 (3%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYI 270 ++ A ++V GLP++ ++ + ++FS G I+ RI+ DQ GVS+G GF+RF +R A Sbjct: 122 IRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 181 Query: 271 AKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAP 450 A + NG + G + + T+ F N + + + +++ S A Sbjct: 182 AIKGLNGQKPLG-------AAEPITVKFANNPSQKTGQALLTHLYQ------SSARRYAG 228 Query: 451 NLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDAD 630 L T + RL+ + ++G + + I + + G+ A + Sbjct: 229 PLHHQTQRFRLDN----LLNMAYGVKSPLSLIARFSPIAIDGMSGLA------GVGLSGG 278 Query: 631 EMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR-------KGQYPVGFIHFGSR 789 FV NL A+E L +LFG FG V V V R KG GF+ + Sbjct: 279 AAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKG---FGFVTMTNY 335 Query: 790 SELDNAIKEMDG 825 E AI ++G Sbjct: 336 DEAAMAIASLNG 347 Score = 52.4 bits (124), Expect = 1e-05 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 + V LP++ T+ + +F + G+I ++++D+ G S G+GFV +++ A A Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100 Query: 286 NGVELQGKRLAV------DLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 NG++LQ K + V S+ L+ L K S +E E+L + + + S L Sbjct: 101 NGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRIL--- 157 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR 543 +D T ++RG F+RF A ++ Sbjct: 158 --VDQVTG---VSRGVGFIRFDKRIEAEEAIK 184 Score = 37.0 bits (84), Expect = 0.42 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Frame = +1 Query: 637 AKIRTA--FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKGQYP--VGFIHFGSRSEL 798 A IR A +V LP ++ +++LF ++G +I R+ V + VGFI F R E Sbjct: 120 ASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEA 179 Query: 799 DNAIKEMDGKTVSG 840 + AIK ++G+ G Sbjct: 180 EEAIKGLNGQKPLG 193 Score = 35.8 bits (81), Expect = 0.93 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 +FV L A E L ++F G + ++++++D KGFGFV + A +A Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 286 NGVELQGKRLAV 321 NG L + L V Sbjct: 346 NGYRLGERVLQV 357 Score = 35.4 bits (80), Expect = 1.2 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = +1 Query: 658 VGNLPANANEDYLKKLFGRFGEVIRVAVSR---KGQ-YPVGFIHFGSRSELDNAIKEMDG 825 V LP N +D K LFG G++ + R GQ GF+++ ++ D AI ++G Sbjct: 43 VNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNG 102 Query: 826 KTVSGPNRGPSFKIQVSVARPA 891 + + I+VS ARP+ Sbjct: 103 LKLQ------TKTIKVSYARPS 118
>Q96J87:CELF6_HUMAN CUG-BP- and ETR-3-like factor 6 - Homo sapiens (Human)| Length = 481 Score = 53.1 bits (126), Expect = 6e-06 Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 11/162 (6%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK-- 276 ++FVG +PR E L+ +F G I +L ++KD+ G+ KG F+ + R+ A A+ Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106 Query: 277 --RQKN----GVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDL 438 QK +Q K A + + LF G L K+ E+ L + F + + Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLF-QPFGHIEECTV 165 Query: 439 AMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR--IGSRT 558 +P+ TSK G AFV+F S G A +R GSRT Sbjct: 166 LRSPD---GTSK-----GCAFVKFGSQGEAQAAIRGLHGSRT 199 Score = 41.6 bits (96), Expect = 0.017 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAER 255 +Q +G +F+ LP+ + L + F G +V ++ D+ SK FGFV F Sbjct: 388 QQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNP 447 Query: 256 ECAYIAKRQKNGVELQGKRLAVDLSLDQD 342 A A + NG ++ KRL V L +D Sbjct: 448 TSAQTAIQAMNGFQIGMKRLKVQLKRPKD 476 Score = 38.9 bits (89), Expect = 0.11 Identities = 26/85 (30%), Positives = 41/85 (48%) Frame = +1 Query: 37 PKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNG 216 P + AAS G R + ++FVG L + E +R +F G I + +++ +G Sbjct: 119 PIQVKPAASEG-------RGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG 171 Query: 217 VSKGFGFVRFAERECAYIAKRQKNG 291 SKG FV+F + A A R +G Sbjct: 172 TSKGCAFVKFGSQGEAQAAIRGLHG 196 Score = 33.5 bits (75), Expect = 4.6 Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 4/124 (3%) Frame = +1 Query: 481 LNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFV 660 L++G AF+ + + +A + + P +N + ++ + R FV Sbjct: 85 LHKGCAFLTYCARDSALKAQSALHEQKTL------PGMNRPIQVKPAASEGRGEDRKLFV 138 Query: 661 GNLPANANEDYLKKLFGRFGEVIRVAVSRK---GQYPVGFIHFGSRSELDNAIKEMDG-K 828 G L E+ +++LF FG + V R F+ FGS+ E AI+ + G + Sbjct: 139 GMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSR 198 Query: 829 TVSG 840 T++G Sbjct: 199 TMAG 202
>Q7ZWM3:CEL3B_XENLA CUG-BP- and ETR-3-like factor 3-B - Xenopus laevis (African clawed| frog) Length = 462 Score = 53.1 bits (126), Expect = 6e-06 Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 11/162 (6%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK-- 276 ++F+G +PR+ E L+ IF G+I +L ++KD+ G+ KG F+ + RE A A+ Sbjct: 8 KLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSA 67 Query: 277 --RQKN----GVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDL 438 QK +Q K + + LF G L K+ + E+ + +TF ++ + Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMF-ETFGNIDECTV 126 Query: 439 AMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI--GSRT 558 P+ TSK G AFV+F +H A + GSRT Sbjct: 127 LRGPD---GTSK-----GCAFVKFQTHTEAQAAINALHGSRT 160 Score = 45.4 bits (106), Expect = 0.001 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAER 255 +Q +G +F+ LP+ T+ + ++F G ++ ++ D+ SK FGFV F Sbjct: 369 QQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNP 428 Query: 256 ECAYIAKRQKNGVELQGKRLAVDLSLDQD 342 A A + NG ++ KRL V L +D Sbjct: 429 GSAQAAIQSMNGFQIGMKRLKVQLKRPKD 457 Score = 40.0 bits (92), Expect = 0.049 Identities = 18/56 (32%), Positives = 33/56 (58%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRF 246 + + R + ++FVG L + T+ +R +F T G I + +++ +G SKG FV+F Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGPDGTSKGCAFVKF 142
>O61374:SXL_CERCA Sex-lethal homolog - Ceratitis capitata (Mediterranean fruit fly)| Length = 348 Score = 52.8 bits (125), Expect = 7e-06 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 7/154 (4%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAK 276 G + V LP+ T+ L +F T G I RIM+D + G S G+ FV FA + A Sbjct: 109 GTNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAI 168 Query: 277 RQKNGVELQGKRLAVDL------SLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDL 438 + NG+ ++ KRL V S+ L+ NL + + ++ + + K + ++ ++ Sbjct: 169 KSLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGK-YGMIVQKNI 227 Query: 439 AMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 D T K RG AFVRF+ A + Sbjct: 228 LR----DKLTGK---PRGVAFVRFNKREEAQEAI 254 Score = 36.6 bits (83), Expect = 0.55 Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 10/130 (7%) Frame = +1 Query: 490 GFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDAD------EMAKIRT 651 G+AFV F++ + R ++ L GI T R + E K Sbjct: 152 GYAFVDFAAETDSQRAIK-------SLNGI-------TVRNKRLKVSYARPGGESIKDTN 197 Query: 652 AFVGNLPANANEDYLKKLFGRFGEVIRVAVSRK----GQYPVGFIHFGSRSELDNAIKEM 819 +V NLP +D L +FG++G +++ + R V F+ F R E AI + Sbjct: 198 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 257 Query: 820 DGKTVSGPNR 849 + G ++ Sbjct: 258 NNVIPEGASQ 267
>Q8VIJ6:SFPQ_MOUSE Splicing factor, proline- and glutamine-rich - Mus musculus (Mouse)| Length = 699 Score = 52.8 bits (125), Expect = 7e-06 Identities = 45/162 (27%), Positives = 69/162 (42%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +FVG LP TE + +F+ GE ++ I K KGFGF++ R A IAK + + Sbjct: 291 LFVGNLPADITEDEFKRLFAKYGEPGEVFINK-----GKGFGFIKLESRALAEIAKAELD 345 Query: 289 GVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSST 468 ++G++L V + L NL S EL+ + F ++ A+ Sbjct: 346 DTPMRGRQLRVRFATHAAALSVRNL----SPYVSNELLEEAFSQFGPIERAVV-----IV 396 Query: 469 SKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAI 594 R + G V F+S AA + S F+L P I Sbjct: 397 DDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVI 438 Score = 43.5 bits (101), Expect = 0.004 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSR-KGQYPVGFIHFGSRSELDNAIKEMDGKT 831 FVGNLPA+ ED K+LF ++GE V +++ KG GFI SR+ + A E+D Sbjct: 292 FVGNLPADITEDEFKRLFAKYGEPGEVFINKGKG---FGFIKLESRALAEIAKAELD--- 345 Query: 832 VSGPNRGPSFKIQVSVARPAVENDN 906 P RG +++ + A+ N Sbjct: 346 -DTPMRGRQLRVRFATHAAALSVRN 369 Score = 35.0 bits (79), Expect = 1.6 Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 20/204 (9%) Frame = +1 Query: 1543 PRPNIGRQLDRIYTQ----EQSYNERSAHEPRQDTGRHLDRRDIHEHSYKER--SAHEPR 1704 PRP I L+++ + E+ + ++ ++T + E+ Y +R S E Sbjct: 434 PRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEME 493 Query: 1705 QDTGRYLDRRYTQ---------EQSYNERSAHEARQDTGRHLDRI----NIHGQSYIERS 1845 + +++ E +Y+E A+ RQD R + + +H Q +R Sbjct: 494 KQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRRMEELHSQEMQKRK 553 Query: 1846 AHEPRQNTGRHLERRYTQEQSYMERPAEAVLPRER-RFVSPAGYATNIEPEFKSRSSAEY 2022 + RQ R RR +E +R E + R+R S GY E + + Sbjct: 554 EMQLRQEEER---RRREEEMMIRQREMEEQMRRQREESYSRMGYMDPRERDMRMGGGGTM 610 Query: 2023 SAEQQQMRFDPYTGEPYKFDPFTG 2094 + DPY KF P G Sbjct: 611 NMG------DPYGSGGQKFPPLGG 628
>P23246:SFPQ_HUMAN Splicing factor, proline- and glutamine-rich - Homo sapiens (Human)| Length = 707 Score = 52.8 bits (125), Expect = 7e-06 Identities = 45/162 (27%), Positives = 69/162 (42%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +FVG LP TE + +F+ GE ++ I K KGFGF++ R A IAK + + Sbjct: 299 LFVGNLPADITEDEFKRLFAKYGEPGEVFINK-----GKGFGFIKLESRALAEIAKAELD 353 Query: 289 GVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSST 468 ++G++L V + L NL S EL+ + F ++ A+ Sbjct: 354 DTPMRGRQLRVRFATHAAALSVRNL----SPYVSNELLEEAFSQFGPIERAVV-----IV 404 Query: 469 SKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAI 594 R + G V F+S AA + S F+L P I Sbjct: 405 DDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVI 446 Score = 43.5 bits (101), Expect = 0.004 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSR-KGQYPVGFIHFGSRSELDNAIKEMDGKT 831 FVGNLPA+ ED K+LF ++GE V +++ KG GFI SR+ + A E+D Sbjct: 300 FVGNLPADITEDEFKRLFAKYGEPGEVFINKGKG---FGFIKLESRALAEIAKAELD--- 353 Query: 832 VSGPNRGPSFKIQVSVARPAVENDN 906 P RG +++ + A+ N Sbjct: 354 -DTPMRGRQLRVRFATHAAALSVRN 377 Score = 35.0 bits (79), Expect = 1.6 Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 20/204 (9%) Frame = +1 Query: 1543 PRPNIGRQLDRIYTQ----EQSYNERSAHEPRQDTGRHLDRRDIHEHSYKER--SAHEPR 1704 PRP I L+++ + E+ + ++ ++T + E+ Y +R S E Sbjct: 442 PRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEME 501 Query: 1705 QDTGRYLDRRYTQ---------EQSYNERSAHEARQDTGRHLDRI----NIHGQSYIERS 1845 + +++ E +Y+E A+ RQD R + + +H Q +R Sbjct: 502 KQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRRMEELHNQEMQKRK 561 Query: 1846 AHEPRQNTGRHLERRYTQEQSYMERPAEAVLPRER-RFVSPAGYATNIEPEFKSRSSAEY 2022 + RQ R RR +E +R E + R+R S GY E + + Sbjct: 562 EMQLRQEEER---RRREEEMMIRQREMEEQMRRQREESYSRMGYMDPRERDMRMGGGGAM 618 Query: 2023 SAEQQQMRFDPYTGEPYKFDPFTG 2094 + DPY KF P G Sbjct: 619 NMG------DPYGSGGQKFPPLGG 636
>P27476:NSR1_YEAST Nuclear localization sequence-binding protein - Saccharomyces| cerevisiae (Baker's yeast) Length = 414 Score = 52.8 bits (125), Expect = 7e-06 Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 20/192 (10%) Frame = +1 Query: 25 RREEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 + E+ + + S + + + A +FVG L S + L++ F G ++ R++ Sbjct: 142 KSEDAEEEEDEESSNKKQKNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIY 201 Query: 205 DQN-GVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQ-------------- 339 ++ S+G+G+V F + A A ++ G E+ G+ + D+S + Sbjct: 202 ERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDT 261 Query: 340 -----DTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFV 504 DTLF GNL + EL K +V+SV + P + +GF +V Sbjct: 262 PSEPSDTLFLGNLSFNADRDAIFELFAK-HGEVVSVRIPTHPETEQP-------KGFGYV 313 Query: 505 RFSSHGAAARVL 540 +FS+ A + L Sbjct: 314 QFSNMEDAKKAL 325 Score = 46.2 bits (108), Expect = 7e-04 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 6/109 (5%) Frame = +1 Query: 604 ERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAV------SRKGQYPV 765 +++ N + +E A T FVG L + ++++LKK F G VI V R Y Sbjct: 157 KKQKNEETEEPA---TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGY-- 211 Query: 766 GFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNKR 912 G++ F ++S + AI+EM GK + G +S ++PA ND + Sbjct: 212 GYVDFENKSYAEKAIQEMQGKEID----GRPINCDMSTSKPAGNNDRAK 256 Score = 43.5 bits (101), Expect = 0.004 Identities = 56/229 (24%), Positives = 88/229 (38%), Gaps = 14/229 (6%) Frame = +1 Query: 343 TLFFGNLC----KEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRF 510 T+F G L EW +EFE + VI + D S RG+ +V F Sbjct: 169 TIFVGRLSWSIDDEWLKKEFEHI-----GGVIGARVIYERGTDRS-------RGYGYVDF 216 Query: 511 SSHGAAARVLR------IGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLP 672 + A + ++ I R PA N +R T F+GNL Sbjct: 217 ENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGN-NDRAKKFGDTPSEPSDTLFLGNLS 275 Query: 673 ANANEDYLKKLFGRFGEV--IRVAVSRKGQYPVGF--IHFGSRSELDNAIKEMDGKTVSG 840 NA+ D + +LF + GEV +R+ + + P GF + F + + A+ + G+ + Sbjct: 276 FNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYID- 334 Query: 841 PNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGRYG 987 NR +++ + P ND R R GG + GR G Sbjct: 335 -NR----PVRLDFSSPRPNNDGGRGGSRGFGGRGGGRGGNRGFG-GRGG 377 Score = 37.7 bits (86), Expect = 0.25 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRI-MKDQNGVSKGFGFVRFAERECAYIAKRQK 285 +F+G L +A + E+F+ GE+V +RI + KGFG+V+F+ E A A Sbjct: 269 LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDAL 328 Query: 286 NGVELQGKRLAVDLS 330 G + + + +D S Sbjct: 329 QGEYIDNRPVRLDFS 343
>A4IIM2:CELF2_XENTR CUG-BP- and ETR-3-like factor 2 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 513 Score = 52.8 bits (125), Expect = 7e-06 Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 21/226 (9%) Frame = +1 Query: 55 AASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSK 225 A H D + D ++FVG +PRS +E L+++F G + + +++D++ SK Sbjct: 23 ALDHSDQPDPD----AIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSK 78 Query: 226 GFGFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEW 375 G FV F R+ A A+ + ++ L G + + +++ LF G + K+ Sbjct: 79 GCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKC 138 Query: 376 SAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSR 555 + + ++ F + + P+ L+RG AFV FS+ A ++ + Sbjct: 139 NENDI-RVMFSPFGQIEECRILRGPD--------GLSRGCAFVTFSTRAMAQNAIKAMHQ 189 Query: 556 TDFMLGGILHPAINWTERESNVD--------ADEMAKIRTAFVGNL 669 + M G + + + + + + A +M ++ TA GNL Sbjct: 190 SQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNL 235 Score = 42.0 bits (97), Expect = 0.013 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 +GA +F+ LP+ + + ++F G ++ ++ D Q +SK FGFV + A A Sbjct: 426 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 485 Query: 274 KRQKNGVELQGKRLAVDL 327 + NG ++ KRL V L Sbjct: 486 IQAMNGFQIGMKRLKVQL 503 Score = 40.8 bits (94), Expect = 0.029 Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 3/201 (1%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G + + WS +E ++L + + V +++ + + SK G FV F Sbjct: 33 DAIKMFVGQIPRSWSEKELKDLF-EPYGAVYQINVLRDRSQNPPQSK-----GCCFVTFY 86 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + AA L G+ HP + ++ + + R F+G + NE+ Sbjct: 87 TRKAALEAQNALHNIK-TLPGMHHPI---QMKPADSEKSNAVEDRKLFIGMVSKKCNEND 142 Query: 694 LKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 ++ +F FG++ + R F+ F +R+ NAIK M S G S Sbjct: 143 IRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH---QSQTMEGCSSP 199 Query: 865 IQVSVARPAVENDNKRSREEV 927 I V A + + +R ++++ Sbjct: 200 IVVKFADTQKDKEQRRLQQQL 220
>Q7ZXE2:CELF2_XENLA CUG-BP- and ETR-3-like factor 2 - Xenopus laevis (African clawed| frog) Length = 536 Score = 52.8 bits (125), Expect = 7e-06 Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 21/226 (9%) Frame = +1 Query: 55 AASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSK 225 A H D + D ++FVG +PRS +E L+++F G + + +++D++ SK Sbjct: 46 ALDHSDQPDPD----AIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSK 101 Query: 226 GFGFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEW 375 G FV F R+ A A+ + ++ L G + + +++ LF G + K+ Sbjct: 102 GCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKC 161 Query: 376 SAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSR 555 + + ++ F + + P+ L+RG AFV FS+ A ++ + Sbjct: 162 NENDI-RVMFSPFGQIEECRILRGPD--------GLSRGCAFVTFSTRAMAQNAIKAMHQ 212 Query: 556 TDFMLGGILHPAINWTERESNVD--------ADEMAKIRTAFVGNL 669 + M G + + + + + + A +M ++ TA GNL Sbjct: 213 SQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNL 258 Score = 42.0 bits (97), Expect = 0.013 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 +GA +F+ LP+ + + ++F G ++ ++ D Q +SK FGFV + A A Sbjct: 449 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 508 Query: 274 KRQKNGVELQGKRLAVDL 327 + NG ++ KRL V L Sbjct: 509 IQAMNGFQIGMKRLKVQL 526 Score = 40.8 bits (94), Expect = 0.029 Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 3/201 (1%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G + + WS +E ++L + + V +++ + + SK G FV F Sbjct: 56 DAIKMFVGQIPRSWSEKELKDLF-EPYGAVYQINVLRDRSQNPPQSK-----GCCFVTFY 109 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + AA L G+ HP + ++ + + R F+G + NE+ Sbjct: 110 TRKAALEAQNALHNIK-TLPGMHHPI---QMKPADSEKSNAVEDRKLFIGMVSKKCNEND 165 Query: 694 LKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFK 864 ++ +F FG++ + R F+ F +R+ NAIK M S G S Sbjct: 166 IRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH---QSQTMEGCSSP 222 Query: 865 IQVSVARPAVENDNKRSREEV 927 I V A + + +R ++++ Sbjct: 223 IVVKFADTQKDKEQRRLQQQL 243
>Q8WP23:BOLL_MACFA Protein boule-like - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 283 Score = 52.8 bits (125), Expect = 7e-06 Identities = 25/71 (35%), Positives = 42/71 (59%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +FVGG+ E LR+ FS G + +++I+ D+ GVSKG+GFV F +E A ++ Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAE 94 Query: 289 GVELQGKRLAV 321 + + K+L + Sbjct: 95 KLNYKDKKLNI 105
>Q8N9W6:BOLL_HUMAN Protein boule-like - Homo sapiens (Human)| Length = 283 Score = 52.8 bits (125), Expect = 7e-06 Identities = 25/71 (35%), Positives = 42/71 (59%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +FVGG+ E LR+ FS G + +++I+ D+ GVSKG+GFV F +E A ++ Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAE 94 Query: 289 GVELQGKRLAV 321 + + K+L + Sbjct: 95 KLNYKDKKLNI 105
>Q6PFR5:TRA2A_MOUSE Transformer-2 protein homolog - Mus musculus (Mouse)| Length = 281 Score = 52.4 bits (124), Expect = 1e-05 Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 9/104 (8%) Frame = +1 Query: 49 RRAASHGDYDEQDRRVKGAE--------VFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 RR+ SH + RR G+ + V GL TE LRE+FS G + + ++ Sbjct: 92 RRSRSHSPMSNR-RRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 150 Query: 205 DQN-GVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSL 333 DQ G S+GF FV F + + A + NG+EL G+R+ VD S+ Sbjct: 151 DQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSI 194
>Q13595:TRA2A_HUMAN Transformer-2 protein homolog - Homo sapiens (Human)| Length = 282 Score = 52.4 bits (124), Expect = 1e-05 Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 9/104 (8%) Frame = +1 Query: 49 RRAASHGDYDEQDRRVKGAE--------VFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 RR+ SH + RR G+ + V GL TE LRE+FS G + + ++ Sbjct: 94 RRSRSHSPMSNR-RRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152 Query: 205 DQN-GVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSL 333 DQ G S+GF FV F + + A + NG+EL G+R+ VD S+ Sbjct: 153 DQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSI 196
>P21522:ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog -| Schistocerca americana (American grasshopper) Length = 342 Score = 52.4 bits (124), Expect = 1e-05 Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 12/156 (7%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++F+GGL T+ +L++ F GEIVD+ +MKD + S+GFGF+ ++ A+ Sbjct: 18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNA 77 Query: 283 K----NGVELQGKRLAVDLSLDQ-------DTLFFGNLCKEWSAEEFEELIHKTFKDVIS 429 + +G ++ KR + + LF G + +E + + K + V+S Sbjct: 78 RPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLRDYF-KQYGTVVS 136 Query: 430 VDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARV 537 + +D T K+ RGFAFV F + ++ Sbjct: 137 AAIV----VDKETRKK---RGFAFVEFDDYDPVDKI 165 Score = 33.9 bits (76), Expect = 3.5 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%) Frame = +1 Query: 622 DADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR----KGQYPVGFIHFGSR 789 D E +R F+G L ++ LK+ F ++GE++ V V + K GFI + Sbjct: 9 DHGEPEHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRA 68 Query: 790 SELDNAIK----EMDGKTVSGPNRGPSFKI 867 +D+A ++DG+ V P +I Sbjct: 69 HMVDDAQNARPHKVDGRVVEPKRAVPRTEI 98
>Q91YE7:RBM5_MOUSE RNA-binding protein 5 - Mus musculus (Mouse)| Length = 815 Score = 52.4 bits (124), Expect = 1e-05 Identities = 68/262 (25%), Positives = 106/262 (40%), Gaps = 56/262 (21%) Frame = +1 Query: 25 RREEPKMDRRAASHGDYDEQDRRV------KGAEVFVGGLPRSATEGTLREIFSTCG--E 180 RR + + S GDY E D R + + + GLP + TE +RE+ + + Sbjct: 66 RRNSDRSEDGYHSDGDYGEHDYRHDISDERESKTIMLRGLPITITESDIREMMESFEGPQ 125 Query: 181 IVDLRIMKDQNGVSKGFGFVRFAERECA--YIAKRQKNGVELQGKRLAVDLSLDQDTLFF 354 D+R+MK + GVS+GF FV F + A ++ QK V +QGK +A+ S + F Sbjct: 126 PADVRLMKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLV-IQGKHIAMHYS-NPRPKFE 183 Query: 355 GNLCKEWSAEEF-----------------EELIHKTFKDVISVD---------------- 435 LC + F +E+ T + SVD Sbjct: 184 DWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESAQSVDYYCDTIILRNIAPHTV 243 Query: 436 -----LAMAPNLDSSTSKRRL--------NRGFAFVRFSSHGAAARVLRIGSRTDFMLGG 576 A++P + + RL NRGFAFV+ SS A+++L+I Sbjct: 244 VDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQS------- 296 Query: 577 ILHPAINWTERESNVDADEMAK 642 LHP + + VD + A+ Sbjct: 297 -LHPPLKIDGKTIGVDFAKSAR 317
>Q6P8A7:RBM24_XENTR RNA-binding protein 24 - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 226 Score = 52.4 bits (124), Expect = 1e-05 Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGLP T+ +LR+ F G+I + ++ D Q G S+G+GFV A+R A A + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 283 KNGVELQGKRLAVDLS 330 N + + G++ V+L+ Sbjct: 72 PNPI-IDGRKANVNLA 86
>Q5ZMA3:RBM24_CHICK RNA-binding protein 24 - Gallus gallus (Chicken)| Length = 225 Score = 52.4 bits (124), Expect = 1e-05 Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGLP T+ +LR+ F G+I + ++ D Q G S+G+GFV A+R A A + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 283 KNGVELQGKRLAVDLS 330 N + + G++ V+L+ Sbjct: 72 PNPI-IDGRKANVNLA 86
>Q02926:RB97D_DROME Ribonucleoprotein RB97D - Drosophila melanogaster (Fruit fly)| Length = 471 Score = 52.4 bits (124), Expect = 1e-05 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 12/157 (7%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++F+GGL TE L+ + G++VD+ +M+D S+GFGF+ + + A+ Sbjct: 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQEN 92 Query: 283 K----NGVELQGKRL-------AVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVIS 429 + +G ++ KR + + ++ LF G L K+ EE F +V+S Sbjct: 93 RPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGL-KDNHDEECLREYFLQFGNVVS 151 Query: 430 VDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 V L D +T KR RGFAFV F + A + + Sbjct: 152 VKLL----TDKTTGKR---RGFAFVEFDDYDAVDKAI 181 Score = 41.6 bits (96), Expect = 0.017 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = +1 Query: 49 RRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSK 225 +RA + + ++ + ++FVGGL + E LRE F G +V ++++ D+ G + Sbjct: 105 KRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRR 164 Query: 226 GFGFVRF 246 GF FV F Sbjct: 165 GFAFVEF 171 Score = 37.4 bits (85), Expect = 0.32 Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 7/162 (4%) Frame = +1 Query: 346 LFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGA 525 LF G L ++ EE +L + + V+ V + D++T + +RGF F+ ++ Sbjct: 34 LFIGGLAP-YTTEENLKLFYGQWGKVVDVVVMR----DAATKR---SRGFGFITYTK--- 82 Query: 526 AARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKL 705 + V R ++ G A R + ++ FVG L N +E+ L++ Sbjct: 83 SLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREY 142 Query: 706 FGRFGEVIRVAV-------SRKGQYPVGFIHFGSRSELDNAI 810 F +FG V+ V + R+G F+ F +D AI Sbjct: 143 FLQFGNVVSVKLLTDKTTGKRRG---FAFVEFDDYDAVDKAI 181
>Q9I8B3:RB24B_XENLA RNA-binding protein 24-B - Xenopus laevis (African clawed frog)| Length = 224 Score = 52.4 bits (124), Expect = 1e-05 Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGLP T+ +LR+ F G+I + ++ D Q G S+G+GFV A+R A A + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 283 KNGVELQGKRLAVDLS 330 N + + G++ V+L+ Sbjct: 72 PNPI-IDGRKANVNLA 86
>Q6GQD3:RB24A_XENLA RNA-binding protein 24-A - Xenopus laevis (African clawed frog)| Length = 225 Score = 52.4 bits (124), Expect = 1e-05 Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGLP T+ +LR+ F G+I + ++ D Q G S+G+GFV A+R A A + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 283 KNGVELQGKRLAVDLS 330 N + + G++ V+L+ Sbjct: 72 PNPI-IDGRKANVNLA 86
>P10979:GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein - Zea| mays (Maize) Length = 157 Score = 52.4 bits (124), Expect = 1e-05 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = +1 Query: 112 FVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQKN 288 FVGGL + + +L F++ GEI+D +++ D + G S+GFGFV F+ A N Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70 Query: 289 GVELQGKRLAVD 324 G EL G+ + V+ Sbjct: 71 GKELDGRNITVN 82 Score = 35.4 bits (80), Expect = 1.2 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKG--QYPVGFIHFGSRSELDNAIKEMD 822 FVG L + + L+ F +GE++ +V R+ GF+ F S + + +AI+ M+ Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70 Query: 823 GKTVSGPN 846 GK + G N Sbjct: 71 GKELDGRN 78
>P49311:GRP2_SINAL Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White| mustard) (Brassica hirta) Length = 169 Score = 52.4 bits (124), Expect = 1e-05 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = +1 Query: 112 FVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQKN 288 FVGGL + E +L FS GE+VD +I+ D + G S+GFGFV F + + A N Sbjct: 11 FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70 Query: 289 GVELQGKRLAVD 324 G +L G+ + V+ Sbjct: 71 GQDLDGRSITVN 82
>Q03878:GRP1_DAUCA Glycine-rich RNA-binding protein - Daucus carota (Carrot)| Length = 157 Score = 52.4 bits (124), Expect = 1e-05 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = +1 Query: 112 FVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQKN 288 FVGGL + + +L + FS G+I D +I+ D + G S+GFGFV F + + A N Sbjct: 9 FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMN 68 Query: 289 GVELQGKRLAVD 324 G EL G+ + V+ Sbjct: 69 GQELDGRNITVN 80 Score = 33.5 bits (75), Expect = 4.6 Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 4/115 (3%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ----YPVGFIHFGSRSELDNAIKEMD 822 FVG L N++ L++ F +FG++ + + GF+ F + +AI+ M+ Sbjct: 9 FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMN 68 Query: 823 GKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGRYG 987 G+ + G N ++V E ++R S GG+ + G YG Sbjct: 69 GQELDGRN--------ITV-------------NEAQSRGSGGGGGRREGGGGGYG 102
>Q5NVC8:CELF4_PONPY CUG-BP- and ETR-3-like factor 4 - Pongo pygmaeus (Orangutan)| Length = 486 Score = 52.4 bits (124), Expect = 1e-05 Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 21/172 (12%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK-- 276 ++F+G +PR+ E L+ +F G+I +L ++KD+ G+ KG F+ + ERE A A+ Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114 Query: 277 --RQKN-------------GVELQGKRLAVDLSLDQD-TLFFGNLCKEWSAEEFEELIHK 408 QK E +G + QD LF G L K+ S ++ L + Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLF-E 173 Query: 409 TFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI--GSRT 558 F ++ + P+ +S +G AFV++SSH A + GS+T Sbjct: 174 AFGNIEECTILRGPDGNS--------KGCAFVKYSSHAEAQAAINALHGSQT 217 Score = 37.0 bits (84), Expect = 0.42 Identities = 22/70 (31%), Positives = 36/70 (51%) Frame = +1 Query: 82 QDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAEREC 261 QDR++ FVG L + +E +R +F G I + I++ +G SKG FV+++ Sbjct: 150 QDRKL-----FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAE 204 Query: 262 AYIAKRQKNG 291 A A +G Sbjct: 205 AQAAINALHG 214
>Q7TSY6:CELF4_MOUSE CUG-BP- and ETR-3-like factor 4 - Mus musculus (Mouse)| Length = 486 Score = 52.4 bits (124), Expect = 1e-05 Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 21/172 (12%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK-- 276 ++F+G +PR+ E L+ +F G+I +L ++KD+ G+ KG F+ + ERE A A+ Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114 Query: 277 --RQKN-------------GVELQGKRLAVDLSLDQD-TLFFGNLCKEWSAEEFEELIHK 408 QK E +G + QD LF G L K+ S ++ L + Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLF-E 173 Query: 409 TFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI--GSRT 558 F ++ + P+ +S +G AFV++SSH A + GS+T Sbjct: 174 AFGNIEECTILRGPDGNS--------KGCAFVKYSSHAEAQAAINALHGSQT 217 Score = 37.0 bits (84), Expect = 0.42 Identities = 22/70 (31%), Positives = 36/70 (51%) Frame = +1 Query: 82 QDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAEREC 261 QDR++ FVG L + +E +R +F G I + I++ +G SKG FV+++ Sbjct: 150 QDRKL-----FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAE 204 Query: 262 AYIAKRQKNG 291 A A +G Sbjct: 205 AQAAINALHG 214
>Q9BZC1:CELF4_HUMAN CUG-BP- and ETR-3-like factor 4 - Homo sapiens (Human)| Length = 486 Score = 52.4 bits (124), Expect = 1e-05 Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 21/172 (12%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK-- 276 ++F+G +PR+ E L+ +F G+I +L ++KD+ G+ KG F+ + ERE A A+ Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114 Query: 277 --RQKN-------------GVELQGKRLAVDLSLDQD-TLFFGNLCKEWSAEEFEELIHK 408 QK E +G + QD LF G L K+ S ++ L + Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLF-E 173 Query: 409 TFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI--GSRT 558 F ++ + P+ +S +G AFV++SSH A + GS+T Sbjct: 174 AFGNIEECTILRGPDGNS--------KGCAFVKYSSHAEAQAAINALHGSQT 217 Score = 37.0 bits (84), Expect = 0.42 Identities = 22/70 (31%), Positives = 36/70 (51%) Frame = +1 Query: 82 QDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAEREC 261 QDR++ FVG L + +E +R +F G I + I++ +G SKG FV+++ Sbjct: 150 QDRKL-----FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAE 204 Query: 262 AYIAKRQKNG 291 A A +G Sbjct: 205 AQAAINALHG 214
>Q924M5:BOLL_MOUSE Protein boule-like - Mus musculus (Mouse)| Length = 281 Score = 52.4 bits (124), Expect = 1e-05 Identities = 24/71 (33%), Positives = 42/71 (59%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +FVGG+ E LR+ FS G + +++I+ D+ GVSKG+GF+ F +E A ++ Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEAE 94 Query: 289 GVELQGKRLAV 321 + + K+L + Sbjct: 95 KLNYKDKKLNI 105 Score = 32.7 bits (73), Expect = 7.9 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEV--IRVAVSRKG-QYPVGFIHFGSRSELDNAIKEMDG 825 FVG + NE+ L+K F ++G V +++ R G GFI F ++ + ++E + Sbjct: 36 FVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEAEK 95 Query: 826 KTVSGP--NRGPSF-KIQVSVARPAV 894 N GP+ K QV + R ++ Sbjct: 96 LNYKDKKLNIGPAIRKQQVGIPRSSL 121
>P49314:ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 292 Score = 52.0 bits (123), Expect = 1e-05 Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAER 255 EQ R + ++FVG LP S L +F G + + ++ D+ +G S+GFGFV + + Sbjct: 80 EQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTK 139 Query: 256 ECAYIAKRQKNGVELQGKRLAVD 324 E A++Q NG E+ G+ + V+ Sbjct: 140 EEVEAAEQQFNGYEIDGRAIRVN 162 Score = 47.8 bits (112), Expect = 2e-04 Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 V+VG L + L+E+FS G +VD +++ D+ +G S+GFGFV ++ + A Sbjct: 210 VYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSL 269 Query: 286 NGVELQGKRLAV 321 NG++L G+ + V Sbjct: 270 NGIDLDGRSIRV 281 Score = 32.7 bits (73), Expect = 7.9 Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 8/122 (6%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFG--EVIRVAVSRKG--QYPVGFIHFGSRSELDNAIKEMD 822 FVGNLP + + L LF R G E++ V + GF+ ++ E++ A ++ + Sbjct: 91 FVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFN 150 Query: 823 GKTVSG----PNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGRYGH 990 G + G N GP+ PA KR R GG Y GR G+ Sbjct: 151 GYEIDGRAIRVNAGPA---------PA-----KRENSSFGGGR----GGNSSYGGGRDGN 192 Query: 991 DS 996 S Sbjct: 193 SS 194
>P40565:IST3_YEAST U2 snRNP component IST3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 148 Score = 52.0 bits (123), Expect = 1e-05 Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 1/88 (1%) Frame = +1 Query: 64 HGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFV 240 H +Y + A +++G L R TEG + +FS G VD+ + +D+N G S+GF ++ Sbjct: 24 HNEYKDN------AYIYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYL 77 Query: 241 RFAERECAYIAKRQKNGVELQGKRLAVD 324 ++ ++ +A NG ++ G+ L +D Sbjct: 78 KYEDQRSTILAVDNLNGFKIGGRALKID 105
>Q91579:CEL3A_XENLA CUG-BP- and ETR-3-like factor 3-A - Xenopus laevis (African clawed| frog) Length = 462 Score = 52.0 bits (123), Expect = 1e-05 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 11/162 (6%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK-- 276 ++F+G +PR+ E L+ IF G+I +L ++KD+ G+ KG F+ + RE A A+ Sbjct: 8 KLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSA 67 Query: 277 --RQKN----GVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDL 438 QK +Q K + + LF G L K+ + E+ + + F+ ++D Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDED----VRRMFEPFGNIDE 123 Query: 439 AMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI--GSRT 558 TSK G AFV+F +H A + GSRT Sbjct: 124 CTVLRGPDGTSK-----GCAFVKFQTHTEAQAAINALHGSRT 160 Score = 45.1 bits (105), Expect = 0.002 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAER 255 +Q +G +F+ LP+ T+ + ++F G ++ ++ D+ SK FGFV F Sbjct: 369 QQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNP 428 Query: 256 ECAYIAKRQKNGVELQGKRLAVDLSLDQD 342 A A + NG ++ KRL V L +D Sbjct: 429 GSAQAAIQAMNGFQIGMKRLKVQLKRPKD 457 Score = 37.7 bits (86), Expect = 0.25 Identities = 17/56 (30%), Positives = 32/56 (57%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRF 246 + + R + ++FVG L + T+ +R +F G I + +++ +G SKG FV+F Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGTSKGCAFVKF 142
>Q08937:ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 291 Score = 51.6 bits (122), Expect = 2e-05 Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAER 255 EQ R + ++FVG LP S L +F G + + ++ D+ G S+GFGFV + + Sbjct: 79 EQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTK 138 Query: 256 ECAYIAKRQKNGVELQGKRLAVD 324 E A++Q NG E+ G+ + V+ Sbjct: 139 EEVEAAEQQFNGYEIDGRAIRVN 161 Score = 48.1 bits (113), Expect = 2e-04 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQK 285 V+VG L + L+E+FS G +VD +++ D+ +G S+GFGFV ++ + A Sbjct: 209 VYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSL 268 Query: 286 NGVELQGKRLAV 321 NGV+L G+ + V Sbjct: 269 NGVDLDGRSIRV 280
>P07909:ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 - Drosophila| melanogaster (Fruit fly) Length = 365 Score = 51.6 bits (122), Expect = 2e-05 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 12/157 (7%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++F+GGL T+ L+ F G IVD+ +MKD + S+GFGF+ ++ A++ Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 91 Query: 283 K----NGVELQGKRLAVDLSLDQDT-------LFFGNLCKEWSAEEFEELIHKTFKDVIS 429 + +G ++ KR +D LF G L + + + + F +++ Sbjct: 92 RPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYF-QHFGNIVD 150 Query: 430 VDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 +++ +D T K+ RGFAFV F + +V+ Sbjct: 151 INIV----IDKETGKK---RGFAFVEFDDYDPVDKVV 180 Score = 43.1 bits (100), Expect = 0.006 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Frame = +1 Query: 34 EPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-Q 210 EPK RA D D + ++FVG L E ++R+ F G IVD+ I+ D + Sbjct: 102 EPK---RAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKE 158 Query: 211 NGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSL 333 G +GF FV F + + QK +L GK + V +L Sbjct: 159 TGKKRGFAFVEFDDYDPVDKVVLQKQH-QLNGKMVDVKKAL 198
>Q15414:RBY1A_HUMAN RNA-binding motif protein, Y chromosome, family 1 member A1 - Homo| sapiens (Human) Length = 496 Score = 51.6 bits (122), Expect = 2e-05 Identities = 25/73 (34%), Positives = 40/73 (54%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQK 285 ++F+GGL R E L+ +F G I ++ ++KD+ S+GF F+ F A A + Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDM 68 Query: 286 NGVELQGKRLAVD 324 NG L GK + V+ Sbjct: 69 NGKSLHGKAIKVE 81 Score = 44.3 bits (103), Expect = 0.003 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 3/115 (2%) Frame = +1 Query: 619 VDADEMAKIRTAFVGNLPANANEDYLKKLFGRFG---EVIRVAVSRKGQYPVGFIHFGSR 789 V+AD K+ F+G L NE LK +FG+ G EV+ + FI F + Sbjct: 2 VEADHPGKL---FIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENP 58 Query: 790 SELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSG 954 ++ NA K+M+GK++ G I+V A+ R R +R + SG Sbjct: 59 ADAKNAAKDMNGKSLHGK------AIKVEQAKKPSFQSGGRRRPPASSRNRSPSG 107
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 51.6 bits (122), Expect = 2e-05 Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGV-SKGFGFVRFAERECAYIAKRQ 282 ++FVGGL + E L + FS+ G I ++ ++KD+ S+GFGF+ F E A A R Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66 Query: 283 KNGVELQGKRLAVD 324 NG L G+++ VD Sbjct: 67 MNGESLDGRQIRVD 80 Score = 35.0 bits (79), Expect = 1.6 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 4/114 (3%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP----VGFIHFGSRSELDNAIKEMD 822 FVG L N +E L+ F FG + V V + + GFI F + +A++ M+ Sbjct: 9 FVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMN 68 Query: 823 GKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGRY 984 G+++ G +I+V A + ++ + R + GG Y GRY Sbjct: 69 GESLDGR------QIRVDHAGKSARG-SRGGAFGGRGRSYSRGGGDQGYGSGRY 115
>Q9H0Z9:RBM38_HUMAN RNA-binding protein 38 - Homo sapiens (Human)| Length = 216 Score = 51.6 bits (122), Expect = 2e-05 Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGLP T+ +LR+ F G+I + ++ D Q G S+G+GFV A+R A A + Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 283 KNGVELQGKRLAVDLS 330 N + + G++ V+L+ Sbjct: 72 PNPI-IDGRKANVNLA 86
>Q5RF26:NUCL_PONPY Nucleolin - Pongo pygmaeus (Orangutan)| Length = 712 Score = 51.6 bits (122), Expect = 2e-05 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 10/144 (6%) Frame = +1 Query: 115 VGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKNGV 294 + L SATE TL+E+F + +++ ++QNG SKG+ F+ FA E A A N Sbjct: 492 LSNLSYSATEETLQEVFE---KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 548 Query: 295 ELQGKRLAVDL----------SLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAM 444 E++G+ + ++L S TLF L S + EE + ++F SV + Sbjct: 549 EIEGRAIRLELQGPRGSPNARSQPSKTLFVKGL----SEDTTEETLKESFDG--SVRARI 602 Query: 445 APNLDSSTSKRRLNRGFAFVRFSS 516 + ++ +SK GF FV F+S Sbjct: 603 VTDRETGSSK-----GFGFVDFNS 621 Score = 45.8 bits (107), Expect = 0.001 Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 +FV GL TE TL+E F V RI+ D + G SKGFGFV F E A AK Sbjct: 576 LFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 632 Query: 286 NGVELQGKRLAVD 324 E+ G ++ +D Sbjct: 633 EDGEIDGNKVTLD 645 Score = 40.8 bits (94), Expect = 0.029 Identities = 63/297 (21%), Positives = 126/297 (42%), Gaps = 30/297 (10%) Frame = +1 Query: 76 DEQDRRVKGAE------VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGF 237 + + ++V+G E +FVG L + + L+ S DL ++ + G+++ FG+ Sbjct: 294 EAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMTRKFGY 353 Query: 238 VRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQD--------TLFFGNLCKEWSAEEFE 393 V F E A + G+++ G + ++ +D TL NL + + +E + Sbjct: 354 VDFESAEDLEKA-LELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELK 412 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLG 573 E+ F+D + L SK ++G A++ F + A + T+ + Sbjct: 413 EV----FEDAAEIRL---------VSKDGKSKGIAYIEFKTEADAEKTFEEKQGTE--ID 457 Query: 574 GILHPAINWTERESNVD------ADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRV 735 G E+ N D + + +T + NL +A E+ L+++F + I+V Sbjct: 458 GRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEK-ATFIKV 516 Query: 736 AVSRKGQYP-VGFIHFGSRSELDNAI-----KEMDGKTV----SGPNRGPSFKIQVS 876 ++ G+ FI F S + A+ +E++G+ + GP P+ + Q S Sbjct: 517 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPS 573
>Q4R4J7:NUCL_MACFA Nucleolin - Macaca fascicularis (Crab eating macaque) (Cynomolgus| monkey) Length = 711 Score = 51.6 bits (122), Expect = 2e-05 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 10/144 (6%) Frame = +1 Query: 115 VGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKNGV 294 + L SATE TL+E+F + +++ ++QNG SKG+ F+ FA E A A N Sbjct: 491 LSNLSYSATEETLQEVFE---KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 547 Query: 295 ELQGKRLAVDL----------SLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAM 444 E++G+ + ++L S TLF L S + EE + ++F SV + Sbjct: 548 EIEGRAIRLELQGPRGSPNARSQPSKTLFVKGL----SEDTTEETLKESFDG--SVRARI 601 Query: 445 APNLDSSTSKRRLNRGFAFVRFSS 516 + ++ +SK GF FV F+S Sbjct: 602 VTDRETGSSK-----GFGFVDFNS 620 Score = 45.8 bits (107), Expect = 0.001 Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 +FV GL TE TL+E F V RI+ D + G SKGFGFV F E A AK Sbjct: 575 LFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 631 Query: 286 NGVELQGKRLAVD 324 E+ G ++ +D Sbjct: 632 EDGEIDGNKVTLD 644 Score = 40.8 bits (94), Expect = 0.029 Identities = 63/297 (21%), Positives = 126/297 (42%), Gaps = 30/297 (10%) Frame = +1 Query: 76 DEQDRRVKGAE------VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGF 237 + + ++V+G E +FVG L + + L+ S DL ++ + G+++ FG+ Sbjct: 293 EAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMTRKFGY 352 Query: 238 VRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQD--------TLFFGNLCKEWSAEEFE 393 V F E A + G+++ G + ++ +D TL NL + + +E + Sbjct: 353 VDFESAEDLEKA-LELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELK 411 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLG 573 E+ F+D + L SK ++G A++ F + A + T+ + Sbjct: 412 EV----FEDAAEIRL---------VSKDGKSKGIAYIEFKTEADAEKTFEEKQGTE--ID 456 Query: 574 GILHPAINWTERESNVD------ADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRV 735 G E+ N D + + +T + NL +A E+ L+++F + I+V Sbjct: 457 GRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEK-ATFIKV 515 Query: 736 AVSRKGQYP-VGFIHFGSRSELDNAI-----KEMDGKTV----SGPNRGPSFKIQVS 876 ++ G+ FI F S + A+ +E++G+ + GP P+ + Q S Sbjct: 516 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPS 572
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 51.6 bits (122), Expect = 2e-05 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 10/144 (6%) Frame = +1 Query: 115 VGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKNGV 294 + L SATE TL+E+F + +++ ++QNG SKG+ F+ FA E A A N Sbjct: 490 LSNLSYSATEETLQEVFE---KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKR 546 Query: 295 ELQGKRLAVDL----------SLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAM 444 E++G+ + ++L S TLF L S + EE + ++F SV + Sbjct: 547 EIEGRAIRLELQGPRGSPNARSQPSKTLFVKGL----SEDTTEETLKESFDG--SVRARI 600 Query: 445 APNLDSSTSKRRLNRGFAFVRFSS 516 + ++ +SK GF FV F+S Sbjct: 601 VTDRETGSSK-----GFGFVDFNS 619 Score = 45.8 bits (107), Expect = 0.001 Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 +FV GL TE TL+E F V RI+ D + G SKGFGFV F E A AK Sbjct: 574 LFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 630 Query: 286 NGVELQGKRLAVD 324 E+ G ++ +D Sbjct: 631 EDGEIDGNKVTLD 643 Score = 40.8 bits (94), Expect = 0.029 Identities = 63/297 (21%), Positives = 126/297 (42%), Gaps = 30/297 (10%) Frame = +1 Query: 76 DEQDRRVKGAE------VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGF 237 + + ++V+G E +FVG L + + L+ S DL ++ + G+++ FG+ Sbjct: 292 EAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMTRKFGY 351 Query: 238 VRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQD--------TLFFGNLCKEWSAEEFE 393 V F E A + G+++ G + ++ +D TL NL + + +E + Sbjct: 352 VDFESAEDLEKA-LELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELK 410 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLG 573 E+ F+D + L SK ++G A++ F + A + T+ + Sbjct: 411 EV----FEDAAEIRL---------VSKDGKSKGIAYIEFKTEADAEKTFEEKQGTE--ID 455 Query: 574 GILHPAINWTERESNVD------ADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRV 735 G E+ N D + + +T + NL +A E+ L+++F + I+V Sbjct: 456 GRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEK-ATFIKV 514 Query: 736 AVSRKGQYP-VGFIHFGSRSELDNAI-----KEMDGKTV----SGPNRGPSFKIQVS 876 ++ G+ FI F S + A+ +E++G+ + GP P+ + Q S Sbjct: 515 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPS 571
>Q7TN33:CELF6_MOUSE CUG-BP- and ETR-3-like factor 6 - Mus musculus (Mouse)| Length = 460 Score = 51.6 bits (122), Expect = 2e-05 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 11/162 (6%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK-- 276 ++FVG +PR E L+ +F G I +L ++KD+ G+ KG F+ + R+ A A+ Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106 Query: 277 --RQKN----GVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDL 438 QK +Q K A + + LF G L K+ E+ L + F + + Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLF-QPFGHIEECTV 165 Query: 439 AMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR--IGSRT 558 +P+ TSK G AFV+F S G A ++ GSRT Sbjct: 166 LRSPD---GTSK-----GCAFVKFGSQGEAQAAIQGLHGSRT 199 Score = 41.6 bits (96), Expect = 0.017 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAER 255 +Q +G +F+ LP+ + L + F G +V ++ D+ SK FGFV F Sbjct: 367 QQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNP 426 Query: 256 ECAYIAKRQKNGVELQGKRLAVDLSLDQD 342 A A + NG ++ KRL V L +D Sbjct: 427 TSAQTAIQAMNGFQIGMKRLKVQLKRPKD 455 Score = 37.4 bits (85), Expect = 0.32 Identities = 25/85 (29%), Positives = 41/85 (48%) Frame = +1 Query: 37 PKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNG 216 P + AAS G R + ++FVG L + E +R +F G I + +++ +G Sbjct: 119 PIQVKPAASEG-------RGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG 171 Query: 217 VSKGFGFVRFAERECAYIAKRQKNG 291 SKG FV+F + A A + +G Sbjct: 172 TSKGCAFVKFGSQGEAQAAIQGLHG 196 Score = 33.1 bits (74), Expect = 6.0 Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 4/124 (3%) Frame = +1 Query: 481 LNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFV 660 L++G AF+ + + +A + + P +N + ++ + R FV Sbjct: 85 LHKGCAFLTYCARDSALKAQSALHEQKTL------PGMNRPIQVKPAASEGRGEDRKLFV 138 Query: 661 GNLPANANEDYLKKLFGRFGEVIRVAVSRK---GQYPVGFIHFGSRSELDNAIKEMDG-K 828 G L E+ +++LF FG + V R F+ FGS+ E AI+ + G + Sbjct: 139 GMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSR 198 Query: 829 TVSG 840 T++G Sbjct: 199 TMTG 202
>Q62176:RBM38_MOUSE RNA-binding protein 38 - Mus musculus (Mouse)| Length = 237 Score = 51.2 bits (121), Expect = 2e-05 Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGLP T+ +LR+ F G+I + ++ D Q G S+G+GFV A+R A A + Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD 92 Query: 283 KNGVELQGKRLAVDLS 330 N + + G++ V+L+ Sbjct: 93 PNPI-IDGRKANVNLA 107
>Q5ZI72:HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-like - Gallus gallus| (Chicken) Length = 301 Score = 51.2 bits (121), Expect = 2e-05 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 6/151 (3%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAE----RECAYI 270 ++F+GGL ++ L E S GE+VD I D G S+GFGFV F + + + Sbjct: 31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 90 Query: 271 AKRQKNGVELQGKRL-AVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 + + +G + KR A+ +F G L + S E+ +E F ++ +++L M Sbjct: 91 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYF-GAFGEIENIELPM- 148 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 D+ T++R RGF F+ ++ ++L Sbjct: 149 ---DTKTNER---RGFCFITYTDEEPVKKLL 173 Score = 47.8 bits (112), Expect = 2e-04 Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 2/211 (0%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G L + S ++ E + + F +V+ + P S RGF FV F Sbjct: 28 DDGKMFIGGLSWDTSKKDLTEYLSR-FGEVVDCTIKTDPVTGRS-------RGFGFVLFK 79 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + +VL + + G ++ P +R + E K FVG L + +E+ Sbjct: 80 DAASVEKVLELKEHK--LDGKLIDP-----KRAKALKGKEPPK--KVFVGGLSPDTSEEQ 130 Query: 694 LKKLFGRFGEV--IRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKI 867 +K+ FG FGE+ I + + K GF E +K++ S ++ S K Sbjct: 131 IKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDE--EPVKKL---LESRYHQIGSGKC 185 Query: 868 QVSVARPAVENDNKRSREEVKTRRSNVSGGK 960 ++ VA+P + ++ +++ K +SN SGG+ Sbjct: 186 EIKVAQP--KEVYRQQQQQQKGGKSNASGGR 214 Score = 35.4 bits (80), Expect = 1.2 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Frame = +1 Query: 88 RRVKGAE----VFVGGLPRSATEGTLREIFSTCGEIVDLRI-MKDQNGVSKGFGFVRFAE 252 + +KG E VFVGGL +E ++E F GEI ++ + M + +GF F+ + + Sbjct: 106 KALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTD 165 Query: 253 RE 258 E Sbjct: 166 EE 167
>Q4V7Y4:DAZLB_XENLA Deleted in azoospermia-like-B - Xenopus laevis (African clawed| frog) Length = 286 Score = 51.2 bits (121), Expect = 2e-05 Identities = 25/69 (36%), Positives = 43/69 (62%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 VFVGG+ + E +R+ F+ G + +++I+ D+ GVSKG+GF+ F++ I K K+ Sbjct: 35 VFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDRTGVSKGYGFISFSDE--VDIQKIVKS 92 Query: 289 GVELQGKRL 315 + GK+L Sbjct: 93 QISFHGKKL 101
>Q5SP50:ZCRB1_DANRE Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Danio rerio (Zebrafish) (Brachydanio rerio) Length = 218 Score = 50.8 bits (120), Expect = 3e-05 Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNG-VSKGFGFVRFAERECAYIAKRQK 285 V+V +P S T + ++ S G++V + I+KD++ +SKG FV F +RE AY R Sbjct: 12 VYVSNIPFSLTNSDMHKLCSKYGKVVKVTIVKDKHTRMSKGVAFVLFLDRESAYNCSRSL 71 Query: 286 NGVELQGKRLAVDLSLD 336 N +L G+ + +++D Sbjct: 72 NNKQLFGRMVKASIAID 88
>P49313:ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 279 Score = 50.8 bits (120), Expect = 3e-05 Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 28/165 (16%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQ 282 ++FVG L SA L E+F G + + ++ D+ G S+GFGFV + +E A +Q Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147 Query: 283 KNGVELQGKRLAVDL--------------------------SLD-QDTLFFGNLCKEWSA 381 NG EL G+ L V+ S D + ++ GNL Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQ 207 Query: 382 EEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSS 516 + E L + K VD + + DS S RGF FV +SS Sbjct: 208 DALETLFSEQGK---VVDAKVVYDRDSGRS-----RGFGFVTYSS 244 Score = 48.9 bits (115), Expect = 1e-04 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD 207 RE + G +D +R V+VG L + L +FS G++VD +++ D Sbjct: 175 RENSSFRGGSRGGGSFDSSNR------VYVGNLAWGVDQDALETLFSEQGKVVDAKVVYD 228 Query: 208 QN-GVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAV 321 ++ G S+GFGFV ++ E A +GV+L G+ + V Sbjct: 229 RDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRV 267 Score = 39.7 bits (91), Expect = 0.065 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKG--QYPVGFIHFGSRSELDNAIKEMD 822 +VGNL ++D L+ LF G+V+ +V R GF+ + S E++NAI+ +D Sbjct: 197 YVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLD 256 Query: 823 GKTVSGPNRGPSFKIQVSVARP 888 G ++ G + ++ + ARP Sbjct: 257 GVDLN----GRAIRVSPAEARP 274
>Q06106:MRD1_YEAST Multiple RNA-binding domain-containing protein 1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 887 Score = 50.8 bits (120), Expect = 3e-05 Identities = 37/138 (26%), Positives = 65/138 (47%) Frame = +1 Query: 40 KMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGV 219 K+ R AS + K ++ V LP AT + E+F++ G++ +R+ K + Sbjct: 742 KLSHRQASQSGNTKTKSNKKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKS 801 Query: 220 SKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEEL 399 ++GF FV F + A A Q +GV L G+RL + + ++D + + EE + Sbjct: 802 ARGFAFVEFLLPKEAENAMDQLHGVHLLGRRLVMQYA-EEDAVD--------AEEEIARM 852 Query: 400 IHKTFKDVISVDLAMAPN 453 K K V + ++A N Sbjct: 853 TKKVRKQVATNEMAALRN 870 Score = 40.4 bits (93), Expect = 0.038 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 15/91 (16%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIF---------------STCGEIVDLRIMKDQNGVSKGFGF 237 + + V GLP T+ LRE F S I D++I++D+NG S+ FGF Sbjct: 2 SRIIVKGLPVYLTDDNLREHFTKRLRQKHSHQAVNGSGPDLITDVKILRDRNGESRRFGF 61 Query: 238 VRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 + + E A+ A NG + ++ V ++ Sbjct: 62 IGYRNEEDAFDAVEYFNGSFINTSKIEVSMA 92 Score = 34.3 bits (77), Expect = 2.7 Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 5/181 (2%) Frame = +1 Query: 406 KTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGI-L 582 K F + + P D + L+ GF FV F + A V+ T I L Sbjct: 684 KVFTGFVVAQVKTKP--DPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQL 741 Query: 583 HPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR---KG 753 + + N K V NLP A + +LF FG++ V V + K Sbjct: 742 KLSHRQASQSGNTKTKSNKKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKS 801 Query: 754 QYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSV-ARPAVENDNKRSREEVK 930 F+ F E +NA+ ++ G + G + + +V A + K+ R++V Sbjct: 802 ARGFAFVEFLLPKEAENAMDQLHGVHLLGRRLVMQYAEEDAVDAEEEIARMTKKVRKQVA 861 Query: 931 T 933 T Sbjct: 862 T 862 Score = 32.7 bits (73), Expect = 7.9 Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 +F+ + ++ E R++FS GE+ ++ + D + G SKGF +V F + + A A + Sbjct: 347 LFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVEL 406 Query: 286 NGVELQGKRLAV 321 + QG+ L + Sbjct: 407 DKQIFQGRLLHI 418
>Q5AJS6:MRD1_CANAL Multiple RNA-binding domain-containing protein 1 - Candida albicans| (Yeast) Length = 841 Score = 50.8 bits (120), Expect = 3e-05 Identities = 36/117 (30%), Positives = 57/117 (48%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 K +++ + LP AT L E+F G++ +R+ K + ++GF FV F + A A Sbjct: 715 KSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLMKEAETAM 774 Query: 277 RQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 Q GV L G+RL + + +QD E + E E + K K V + +LA A Sbjct: 775 SQLEGVHLLGRRLVMQYA-EQD--------PENAEVEIERMTKKVKKQVATQNLAAA 822 Score = 50.1 bits (118), Expect = 5e-05 Identities = 25/76 (32%), Positives = 43/76 (56%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQ 282 + + V GLP+ TE LRE FS G++ D+++MK +NG S+ F F+ + + A A + Sbjct: 2 SRLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKY 61 Query: 283 KNGVELQGKRLAVDLS 330 N + R+ V+ + Sbjct: 62 FNKSFIDTARIEVEFA 77 Score = 40.8 bits (94), Expect = 0.029 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 10/170 (5%) Frame = +1 Query: 457 DSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGG------ILHPAINWTERESN 618 D S + L+ GF FV F + A + I + +L G + H T S Sbjct: 653 DPKNSGKTLSMGFGFVEFRTKEQAN--VAISTLDGHVLDGHKLQLKLSHKQGTGTSASSI 710 Query: 619 VDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYPV---GFIHFGSR 789 + + +KI + NLP A L +LFG FG++ V V +K F+ F Sbjct: 711 KKSGKSSKI---IIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLM 767 Query: 790 SELDNAIKEMDGKTVSGPNRGPSFKIQ-VSVARPAVENDNKRSREEVKTR 936 E + A+ +++G + G + Q A +E K+ +++V T+ Sbjct: 768 KEAETAMSQLEGVHLLGRRLVMQYAEQDPENAEVEIERMTKKVKKQVATQ 817 Score = 37.0 bits (84), Expect = 0.42 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 +F+ + A+E R +FS G + ++ I D + G SKGF +V+F ++E A A R Sbjct: 312 LFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSL 371 Query: 286 NGVELQGKRLAV 321 + QG+ L + Sbjct: 372 DKQIFQGRLLHI 383
>Q62826:HNRPM_RAT Heterogeneous nuclear ribonucleoprotein M - Rattus norvegicus (Rat)| Length = 690 Score = 50.8 bits (120), Expect = 3e-05 Identities = 30/82 (36%), Positives = 47/82 (57%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 K ++FV LP T L++ F+ CG ++ I K +NG SKG G V+F E A A Sbjct: 611 KACQIFVRNLPFDFTWKMLKDKFNECGHVLYADI-KMENGKSKGCGVVKFESPEVAERAC 669 Query: 277 RQKNGVELQGKRLAVDLSLDQD 342 R NG++L G+ +D+ +D++ Sbjct: 670 RMMNGMKLSGRE--IDVRIDRN 689 Score = 38.5 bits (88), Expect = 0.14 Identities = 23/64 (35%), Positives = 33/64 (51%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKR 279 G+ VFV L L+E+FS G +V I++D++G S+G G V F + A A Sbjct: 163 GSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAIS 222 Query: 280 QKNG 291 NG Sbjct: 223 MFNG 226
>Q9D0E1:HNRPM_MOUSE Heterogeneous nuclear ribonucleoprotein M - Mus musculus (Mouse)| Length = 729 Score = 50.8 bits (120), Expect = 3e-05 Identities = 30/82 (36%), Positives = 47/82 (57%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 K ++FV LP T L++ F+ CG ++ I K +NG SKG G V+F E A A Sbjct: 650 KACQIFVRNLPFDFTWKMLKDKFNECGHVLYADI-KMENGKSKGCGVVKFESPEVAERAC 708 Query: 277 RQKNGVELQGKRLAVDLSLDQD 342 R NG++L G+ +D+ +D++ Sbjct: 709 RMMNGMKLSGRE--IDVRIDRN 728 Score = 39.3 bits (90), Expect = 0.084 Identities = 23/64 (35%), Positives = 33/64 (51%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKR 279 G+ VFV L L+E+FS G +V I++D++G S+G G V F + A A Sbjct: 202 GSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAIS 261 Query: 280 QKNG 291 NG Sbjct: 262 MFNG 265
>P52272:HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M - Homo sapiens (Human)| Length = 730 Score = 50.8 bits (120), Expect = 3e-05 Identities = 30/82 (36%), Positives = 47/82 (57%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 K ++FV LP T L++ F+ CG ++ I K +NG SKG G V+F E A A Sbjct: 651 KACQIFVRNLPFDFTWKMLKDKFNECGHVLYADI-KMENGKSKGCGVVKFESPEVAERAC 709 Query: 277 RQKNGVELQGKRLAVDLSLDQD 342 R NG++L G+ +D+ +D++ Sbjct: 710 RMMNGMKLSGRE--IDVRIDRN 729 Score = 38.5 bits (88), Expect = 0.14 Identities = 23/64 (35%), Positives = 33/64 (51%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKR 279 G+ VFV L L+E+FS G +V I++D++G S+G G V F + A A Sbjct: 203 GSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAIS 262 Query: 280 QKNG 291 NG Sbjct: 263 MFNG 266
>P38159:HNRPG_HUMAN Heterogeneous nuclear ribonucleoprotein G - Homo sapiens (Human)| Length = 391 Score = 50.8 bits (120), Expect = 3e-05 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++F+GGL E L +F G IV++ +MKD + S+GF FV F A A R Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68 Query: 283 KNGVELQGKRLAVD 324 NG L GK + V+ Sbjct: 69 MNGKSLDGKAIKVE 82 Score = 42.0 bits (97), Expect = 0.013 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 4/78 (5%) Frame = +1 Query: 619 VDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ----YPVGFIHFGS 786 V+AD K+ F+G L NE L+ +FG++G ++ V + + + F+ F S Sbjct: 2 VEADRPGKL---FIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFES 58 Query: 787 RSELDNAIKEMDGKTVSG 840 ++ +A ++M+GK++ G Sbjct: 59 PADAKDAARDMNGKSLDG 76
>Q9Z130:HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-like - Mus musculus| (Mouse) Length = 301 Score = 50.8 bits (120), Expect = 3e-05 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 6/151 (3%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAER----ECAYI 270 ++F+GGL ++ L E S GE+VD I D G S+GFGFV F + + + Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89 Query: 271 AKRQKNGVELQGKRL-AVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 + + +G + KR A+ +F G L + S E+ +E F ++ +++L M Sbjct: 90 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYF-GAFGEIENIELPM- 147 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 D+ T++R RGF F+ ++ ++L Sbjct: 148 ---DTKTNER---RGFCFITYTDEEPVKKLL 172 Score = 42.7 bits (99), Expect = 0.008 Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 2/211 (0%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G L + S ++ E + + F +V+ + P S RGF FV F Sbjct: 27 DDGKMFIGGLSWDTSKKDLTEYLSR-FGEVVDCTIKTDPVTGRS-------RGFGFVLFK 78 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + +VL + + G ++ P +R + E K FVG L + +E+ Sbjct: 79 DAASVDKVLELKEHK--LDGKLIDP-----KRAKALKGKEPPK--KVFVGGLSPDTSEEQ 129 Query: 694 LKKLFGRFGEV--IRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKI 867 +K+ FG FGE+ I + + K GF E +K++ S ++ S K Sbjct: 130 IKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDE--EPVKKL---LESRYHQIGSGKC 184 Query: 868 QVSVARPAVENDNKRSREEVKTRRSNVSGGK 960 ++ VA+P + ++ +++ K R +GG+ Sbjct: 185 EIKVAQP--KEVYRQQQQQQKGGRGAAAGGR 213 Score = 35.4 bits (80), Expect = 1.2 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Frame = +1 Query: 88 RRVKGAE----VFVGGLPRSATEGTLREIFSTCGEIVDLRI-MKDQNGVSKGFGFVRFAE 252 + +KG E VFVGGL +E ++E F GEI ++ + M + +GF F+ + + Sbjct: 105 KALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTD 164 Query: 253 RE 258 E Sbjct: 165 EE 166
>O14979:HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-like - Homo sapiens| (Human) Length = 420 Score = 50.8 bits (120), Expect = 3e-05 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 6/151 (3%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAER----ECAYI 270 ++F+GGL ++ L E S GE+VD I D G S+GFGFV F + + + Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208 Query: 271 AKRQKNGVELQGKRL-AVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 + + +G + KR A+ +F G L + S E+ +E F ++ +++L M Sbjct: 209 KEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYF-GAFGEIENIELPM- 266 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 D+ T++R RGF F+ ++ ++L Sbjct: 267 ---DTKTNER---RGFCFITYTDEEPVKKLL 291 Score = 42.7 bits (99), Expect = 0.008 Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 2/211 (0%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G L + S ++ E + + F +V+ + P S RGF FV F Sbjct: 146 DDGKMFIGGLSWDTSKKDLTEYLSR-FGEVVDCTIKTDPVTGRS-------RGFGFVLFK 197 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + +VL + + G ++ P +R + E K FVG L + +E+ Sbjct: 198 DAASVDKVLELKEHK--LDGKLIDP-----KRAKALKGKEPPK--KVFVGGLSPDTSEEQ 248 Query: 694 LKKLFGRFGEV--IRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKI 867 +K+ FG FGE+ I + + K GF E +K++ S ++ S K Sbjct: 249 IKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDE--EPVKKL---LESRYHQIGSGKC 303 Query: 868 QVSVARPAVENDNKRSREEVKTRRSNVSGGK 960 ++ VA+P + ++ +++ K R +GG+ Sbjct: 304 EIKVAQP--KEVYRQQQQQQKGGRGAAAGGR 332 Score = 35.4 bits (80), Expect = 1.2 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Frame = +1 Query: 88 RRVKGAE----VFVGGLPRSATEGTLREIFSTCGEIVDLRI-MKDQNGVSKGFGFVRFAE 252 + +KG E VFVGGL +E ++E F GEI ++ + M + +GF F+ + + Sbjct: 224 KALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTD 283 Query: 253 RE 258 E Sbjct: 284 EE 285
>Q76CY5:DAZL_XENTR Deleted in azoospermia-like - Xenopus tropicalis (Western clawed| frog) (Silurana tropicalis) Length = 286 Score = 50.8 bits (120), Expect = 3e-05 Identities = 26/69 (37%), Positives = 41/69 (59%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 VFVGG+ + E + +F G++ DL+I+ D+ GVSKG+GFV F + + K K+ Sbjct: 32 VFVGGIDITMDEMAIGNLFEKYGKVKDLKIITDRTGVSKGYGFVSFYDE--VDVQKIVKS 89 Query: 289 GVELQGKRL 315 + GK+L Sbjct: 90 QINFHGKKL 98
>O57437:DAZLA_XENLA Deleted in azoospermia-like-A - Xenopus laevis (African clawed| frog) Length = 286 Score = 50.8 bits (120), Expect = 3e-05 Identities = 24/69 (34%), Positives = 43/69 (62%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 VFVGG+ + E +R+ F+ G + +++I+ D+ GVSKG+GF+ F++ + K K+ Sbjct: 35 VFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDRTGVSKGYGFISFSDE--VDVQKIVKS 92 Query: 289 GVELQGKRL 315 + GK+L Sbjct: 93 QISFHGKKL 101
>Q6DGV1:CELF4_DANRE CUG-BP- and ETR-3-like factor 4 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 520 Score = 50.8 bits (120), Expect = 3e-05 Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 10/161 (6%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQ 282 ++F+G +PR+ E LR +F G+I +L ++KD+ G+ KG F+ + RE A A+ Sbjct: 48 KLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTA 107 Query: 283 KNGVE-LQGKRLAVDL------SLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLA 441 + + L G + + S +D F + + E+ + ++F + + Sbjct: 108 LHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIEECTIL 167 Query: 442 MAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI--GSRT 558 P+ +S +G AFV++S+H A + GS+T Sbjct: 168 RGPDGNS--------KGCAFVKYSTHAEAQAAISALHGSQT 200 Score = 45.1 bits (105), Expect = 0.002 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAER 255 +Q +G +F+ LP+ +G L ++F G ++ ++ D+ SK FGFV F Sbjct: 427 QQREGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNP 486 Query: 256 ECAYIAKRQKNGVELQGKRLAVDLSLDQD 342 A A + NG ++ KRL V L +D Sbjct: 487 GSAQAAIQSMNGFQIGMKRLKVQLKRPKD 515 Score = 37.0 bits (84), Expect = 0.42 Identities = 17/57 (29%), Positives = 33/57 (57%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFA 249 + + R + ++FVG L + E +R +F + G I + I++ +G SKG FV+++ Sbjct: 127 DSESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIEECTILRGPDGNSKGCAFVKYS 183
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 50.4 bits (119), Expect = 4e-05 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%) Frame = +1 Query: 52 RAASHGDYDEQDRRV--KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVS 222 +AA G E+ RV V+VG LP G L ++FS G++V+ R++ D + G S Sbjct: 225 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRS 284 Query: 223 KGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 +GFGFV ++ + A +G L+G+ + V+++ Sbjct: 285 RGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVA 320 Score = 43.5 bits (101), Expect = 0.004 Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 7/192 (3%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLA-MAPNLDSSTSKRRLNRGFAFVRF 510 ++ LF GNL + +++ L F+ +V++A + N ++ S RGF FV Sbjct: 148 EEAKLFVGNLAYDVNSQALAML----FEQAGTVEIAEVIYNRETDQS-----RGFGFVTM 198 Query: 511 SSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMA--KIRTAFVGNLPANAN 684 SS A + +R D L G L R S + +VGNLP + + Sbjct: 199 SSVDEAETAVEKFNRYD--LNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVD 256 Query: 685 EDYLKKLFGRFGEVI--RVAVSRK--GQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRG 852 L++LF G+V+ RV R+ GF+ EL+ AI +DG+ + G Sbjct: 257 NGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNL----EG 312 Query: 853 PSFKIQVSVARP 888 + ++ V+ RP Sbjct: 313 RAIRVNVAEERP 324 Score = 33.9 bits (76), Expect = 3.5 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCG--EIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 A++FVG L L +F G EI ++ I + S+GFGFV + + A A Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEV-IYNRETDQSRGFGFVTMSSVDEAETAV 208 Query: 277 RQKNGVELQGKRLAVD 324 + N +L G+ L V+ Sbjct: 209 EKFNRYDLNGRLLTVN 224
>Q95192:DAZL_MACFA Deleted in azoospermia-like - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 295 Score = 50.4 bits (119), Expect = 4e-05 Identities = 30/107 (28%), Positives = 53/107 (49%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD 207 RE AA+ Y + ++ VFVGG+ E +R F+ G + +++I+ D Sbjct: 15 REASTQSSSAAASQGYVLPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITD 74 Query: 208 QNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDTL 348 + GVSKG+GFV F + K ++ + GK+L + ++ + L Sbjct: 75 RTGVSKGYGFVSFFND--VDVQKIVESQINFHGKKLKLGPAIRKQNL 119
>Q92904:DAZL_HUMAN Deleted in azoospermia-like - Homo sapiens (Human)| Length = 295 Score = 50.4 bits (119), Expect = 4e-05 Identities = 30/107 (28%), Positives = 53/107 (49%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD 207 RE AA+ Y + ++ VFVGG+ E +R F+ G + +++I+ D Sbjct: 15 REASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITD 74 Query: 208 QNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDTL 348 + GVSKG+GFV F + K ++ + GK+L + ++ + L Sbjct: 75 RTGVSKGYGFVSFFND--VDVQKIVESQINFHGKKLKLGPAIRKQNL 119
>Q8CIN6:CELF3_MOUSE CUG-BP- and ETR-3-like factor 3 - Mus musculus (Mouse)| Length = 465 Score = 50.4 bits (119), Expect = 4e-05 Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 8/190 (4%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQ 282 ++FVG +PR E L+ IF G I +L ++KD+ G+ KG F+ + R+ A A+ Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67 Query: 283 KNGVE-LQGKRLAVDL------SLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLA 441 + + L G + + S LF G L K+ + E+ + K F+ ++D Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGDRKLFVGMLGKQQTDED----VRKMFEPFGTIDEC 123 Query: 442 MAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNV 621 TSK G AFV+F +H A + + + G + + + E Sbjct: 124 TVLRGPDGTSK-----GCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 178 Query: 622 DADEMAKIRT 651 M ++ T Sbjct: 179 GLRRMQQVAT 188 Score = 45.4 bits (106), Expect = 0.001 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 2/104 (1%) Frame = +1 Query: 37 PKMDRRAASHGDYDEQDRR-VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ- 210 P+ ++ +Q R G +F+ LP+ T+ + ++F G ++ ++ D+ Sbjct: 357 PQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRA 416 Query: 211 NGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQD 342 SK FGFV F A A + NG ++ KRL V L +D Sbjct: 417 TNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKD 460
>Q5SZQ8:CELF3_HUMAN CUG-BP- and ETR-3-like factor 3 - Homo sapiens (Human)| Length = 465 Score = 50.4 bits (119), Expect = 4e-05 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 9/191 (4%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK-- 276 ++FVG +PR E L+ IF G I +L ++KD+ G+ KG F+ + R+ A A+ Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67 Query: 277 --RQKN----GVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDL 438 QK +Q K + + LF G L K+ + E+ + K F+ ++D Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDED----VRKMFEPFGTIDE 123 Query: 439 AMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESN 618 TSK G AFV+F +H A + + + G + + + E Sbjct: 124 CTVLRGPDGTSK-----GCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178 Query: 619 VDADEMAKIRT 651 M ++ T Sbjct: 179 RGLRRMQQVAT 189 Score = 46.6 bits (109), Expect = 5e-04 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Frame = +1 Query: 37 PKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-N 213 P+ ++ +Q G +F+ LP+ T+ + ++F G ++ ++ D+ Sbjct: 358 PQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRAT 417 Query: 214 GVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQD 342 SK FGFV F A A + NG ++ KRL V L +D Sbjct: 418 NQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKD 460 Score = 37.7 bits (86), Expect = 0.25 Identities = 17/56 (30%), Positives = 33/56 (58%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRF 246 + + R + ++FVG L + T+ +R++F G I + +++ +G SKG FV+F Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKF 142
>Q08E07:CELF3_BOVIN CUG-BP- and ETR-3-like factor 3 - Bos taurus (Bovine)| Length = 461 Score = 50.4 bits (119), Expect = 4e-05 Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 9/191 (4%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAK-- 276 ++FVG +PR E L+ IF G I +L ++KD+ G+ KG F+ + R+ A A+ Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67 Query: 277 --RQKN----GVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDL 438 QK +Q K + + LF G L K+ + E+ + K F+ ++D Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDED----VRKMFEPFGTIDE 123 Query: 439 AMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESN 618 TSK G AFV+F +H A + + + G + + + E Sbjct: 124 CTVLRGPDGTSK-----GCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178 Query: 619 VDADEMAKIRT 651 M ++ T Sbjct: 179 RGLRRMQQVAT 189 Score = 45.4 bits (106), Expect = 0.001 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 1/106 (0%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD 207 ++ P ++ +Q G +F+ LP+ T+ + ++F G ++ ++ D Sbjct: 351 QQPPPPPQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVD 410 Query: 208 Q-NGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQD 342 + SK FGFV F A A + NG ++ KRL V L +D Sbjct: 411 RATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKD 456 Score = 37.7 bits (86), Expect = 0.25 Identities = 17/56 (30%), Positives = 33/56 (58%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRF 246 + + R + ++FVG L + T+ +R++F G I + +++ +G SKG FV+F Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKF 142
>P70318:TIAR_MOUSE Nucleolysin TIAR - Mus musculus (Mouse)| Length = 392 Score = 50.1 bits (118), Expect = 5e-05 Identities = 66/288 (22%), Positives = 114/288 (39%), Gaps = 44/288 (15%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-----GVSKGFG-----------FV 240 ++VG L R TE + ++FS G +++ +Q S GF FV Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFV 70 Query: 241 RFAERECAYIAKRQKNGVELQGKRLAVD-----LSLDQDT-----LFFGNLCKEWSAEEF 390 F E A A NG ++ GK + V+ S +DT +F G+L E + E+ Sbjct: 71 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTED- 129 Query: 391 EELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRF-SSHGAAARVLRIGSRTDFM 567 I F + A D +T K ++G+ FV F + A ++ +G + Sbjct: 130 ---IKSAFAPFGKISDARVVK-DMATGK---SKGYGFVSFYNKLDAENAIVHMGGQ---W 179 Query: 568 LGGILHPAINWTERE-----------------SNVDADEMAKIRTAFVGNLPANANEDYL 696 LGG NW R+ +V K T + G + + + + Sbjct: 180 LGG-RQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLM 238 Query: 697 KKLFGRFGEVIRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSG 840 ++ F FG+++ + V + Y F+ F + +AI ++G T+ G Sbjct: 239 RQTFSPFGQIMEIRVFPEKGY--SFVRFSTHESAAHAIVSVNGTTIEG 284 Score = 45.1 bits (105), Expect = 0.002 Identities = 23/70 (32%), Positives = 38/70 (54%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 K V+ GG+ T+ +R+ FS G+I+++R+ + KG+ FVRF+ E A A Sbjct: 220 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAI 274 Query: 277 RQKNGVELQG 306 NG ++G Sbjct: 275 VSVNGTTIEG 284
>Q6URK4:ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 - Rattus norvegicus| (Rat) Length = 379 Score = 50.1 bits (118), Expect = 5e-05 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 13/184 (7%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDEQDRRVKGA-EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 R +P RR G+ + + ++F+GGL T+ +LRE F G + D +M+ Sbjct: 9 RPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMR 68 Query: 205 D-QNGVSKGFGFVRFA---ERECAYIAKRQK-NGVELQGKR-------LAVDLSLDQDTL 348 D Q S+GFGFV ++ E + A A+ K +G ++ KR + L + Sbjct: 69 DPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKI 128 Query: 349 FFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAA 528 F G + ++ + K + + ++++ D + K+ RGFAFV F H Sbjct: 129 FVGGIKEDTEEYNLRDYFEK-YGKIETIEVME----DRQSGKK---RGFAFVTFDDHDTV 180 Query: 529 ARVL 540 +++ Sbjct: 181 DKIV 184
>Q8BG05:ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 - Mus musculus (Mouse)| Length = 379 Score = 50.1 bits (118), Expect = 5e-05 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 13/184 (7%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDEQDRRVKGA-EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 R +P RR G+ + + ++F+GGL T+ +LRE F G + D +M+ Sbjct: 9 RPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMR 68 Query: 205 D-QNGVSKGFGFVRFA---ERECAYIAKRQK-NGVELQGKR-------LAVDLSLDQDTL 348 D Q S+GFGFV ++ E + A A+ K +G ++ KR + L + Sbjct: 69 DPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKI 128 Query: 349 FFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAA 528 F G + ++ + K + + ++++ D + K+ RGFAFV F H Sbjct: 129 FVGGIKEDTEEYNLRDYFEK-YGKIETIEVME----DRQSGKK---RGFAFVTFDDHDTV 180 Query: 529 ARVL 540 +++ Sbjct: 181 DKIV 184
>P51991:ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 - Homo sapiens (Human)| Length = 378 Score = 50.1 bits (118), Expect = 5e-05 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 13/184 (7%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDEQDRRVKGA-EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 R +P RR G+ + + ++F+GGL T+ +LRE F G + D +M+ Sbjct: 9 RPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMR 68 Query: 205 D-QNGVSKGFGFVRFA---ERECAYIAKRQK-NGVELQGKR-------LAVDLSLDQDTL 348 D Q S+GFGFV ++ E + A A+ K +G ++ KR + L + Sbjct: 69 DPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKI 128 Query: 349 FFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAA 528 F G + ++ + K + + ++++ D + K+ RGFAFV F H Sbjct: 129 FVGGIKEDTEEYNLRDYFEK-YGKIETIEVME----DRQSGKK---RGFAFVTFDDHDTV 180 Query: 529 ARVL 540 +++ Sbjct: 181 DKIV 184
>P17130:ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog - Xenopus| laevis (African clawed frog) Length = 365 Score = 50.1 bits (118), Expect = 5e-05 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 13/158 (8%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGV-SKGFGFVRFA---ERECAYIA 273 ++F+GGL T+ +LRE F G + D +M+D N S+GFGFV + E + A A Sbjct: 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTA 74 Query: 274 KRQK-NGVELQGKRLA-------VDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFK-DVI 426 + K +G ++ KR L +F G + ++ + E + K +VI Sbjct: 75 RPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVI 134 Query: 427 SVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 + D + K+ RGFAFV F H + +++ Sbjct: 135 EI------MTDRGSGKK---RGFAFVTFEDHDSVDKIV 163 Score = 44.3 bits (103), Expect = 0.003 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Frame = +1 Query: 34 EPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ- 210 EPK RA S D + ++FVGG+ E LRE F G+I + IM D+ Sbjct: 85 EPK---RAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRG 141 Query: 211 NGVSKGFGFVRFAERE 258 +G +GF FV F + + Sbjct: 142 SGKKRGFAFVTFEDHD 157 Score = 37.7 bits (86), Expect = 0.25 Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 5/222 (2%) Frame = +1 Query: 346 LFFGNLCKEWSAEEFEELIHK--TFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSH 519 LF G L E + E E + T D + + PN SKR +RGF FV + S Sbjct: 16 LFIGGLSFETTDESLREHFEQWGTLTDCV---VMRDPN-----SKR--SRGFGFVTYLST 65 Query: 520 GAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLK 699 + +R + G ++ P RE + ++ FVG + + ED+L+ Sbjct: 66 DEVDAAMT--ARPHKVDGRVVEPK-RAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLR 122 Query: 700 KLFGRFG--EVIRVAVSRKGQYPVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQV 873 + F ++G EVI + R GF F + + D+ K + K + N + + Sbjct: 123 EYFEQYGKIEVIEIMTDRGSGKKRGFA-FVTFEDHDSVDKIVIQKYHTVNNHNSQVRKAL 181 Query: 874 SVARPAVENDNKRSREEVKTRRSNVSGGKPDY-SHGRYGHDS 996 S A + ++R R GG +Y S G +G+D+ Sbjct: 182 SKQEMASVSGSQRER-----------GGSGNYGSRGGFGNDN 212
>Q13151:ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 - Homo sapiens (Human)| Length = 305 Score = 50.1 bits (118), Expect = 5e-05 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Frame = +1 Query: 49 RRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSK 225 +RA S D K ++FVGGL EG L E FS G + I+ D Q+G + Sbjct: 80 KRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKR 139 Query: 226 GFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDTLFFG 357 GFGFV F + A A K +QG R+ V ++ ++ ++ G Sbjct: 140 GFGFVYFQNHDAADKAAVVKFH-PIQGHRVEVKKAVPKEDIYSG 182
>P49310:GRP1_SINAL Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White| mustard) (Brassica hirta) Length = 166 Score = 50.1 bits (118), Expect = 5e-05 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Frame = +1 Query: 112 FVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQKN 288 FVGGL + + L FS GE++D +I+ D + G S+GFGFV F + + A N Sbjct: 11 FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70 Query: 289 GVELQGKRLAVD 324 G +L G+ + V+ Sbjct: 71 GQDLDGRSITVN 82
>O04425:FCA_ARATH Flowering time control protein FCA - Arabidopsis thaliana| (Mouse-ear cress) Length = 747 Score = 50.1 bits (118), Expect = 5e-05 Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 12/204 (5%) Frame = +1 Query: 19 G*RREEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRI 198 G +R P D + + D ++ VK +FVG +PR+ATE +R F G ++++ + Sbjct: 95 GQKRGYPISDHGSFTGTDVSDRSSTVK---LFVGSVPRTATEEEIRPYFEQHGNVLEVAL 151 Query: 199 MKD-QNGVSKGFGFVRFAERECAYIAKRQ-KNGVELQGKRLAVD----------LSLDQD 342 +KD + G +G FV++A + A A R N + L G V + + Sbjct: 152 IKDKRTGQQQGCCFVKYATSKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEF 211 Query: 343 TLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHG 522 LF G+L K+ + +E EE I F V V L + R +RG FV++SS Sbjct: 212 KLFVGSLNKQATEKEVEE-IFLQFGHVEDVYL--------MRDEYRQSRGCGFVKYSSKE 262 Query: 523 AAARVLRIGSRTDFMLGGILHPAI 594 A + G + + G P I Sbjct: 263 TAMAAID-GLNGTYTMRGCNQPLI 285 Score = 33.5 bits (75), Expect = 4.6 Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 7/210 (3%) Frame = +1 Query: 280 QKNGVELQ--GKRLAVDLSLDQDT--LFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMA 447 QK G + G D+S T LF G++ + + EE + +V+ V L Sbjct: 96 QKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQ-HGNVLEVALIK- 153 Query: 448 PNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDA 627 D T +++ G FV++++ A R +R + GG + + + E Sbjct: 154 ---DKRTGQQQ---GCCFVKYATSKDADRAIRALHNQITLPGGTGPVQVRYADGERERIG 207 Query: 628 DEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR---KGQYPVGFIHFGSRSEL 798 K+ FVG+L A E ++++F +FG V V + R + GF+ + S+ Sbjct: 208 TLEFKL---FVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSK--- 261 Query: 799 DNAIKEMDGKTVSGPNRGPSFKIQVSVARP 888 + A+ +DG + RG + + V A P Sbjct: 262 ETAMAAIDGLNGTYTMRGCNQPLIVRFAEP 291
>Q804A9:DAZL_CHICK Deleted in azoospermia-like - Gallus gallus (Chicken)| Length = 289 Score = 50.1 bits (118), Expect = 5e-05 Identities = 28/86 (32%), Positives = 47/86 (54%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 VFVGG+ E +R F G + +++I+ D+ GVSKG+GFV F + + K ++ Sbjct: 38 VFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDRTGVSKGYGFVSFLDN--VDVQKIVES 95 Query: 289 GVELQGKRLAVDLSLDQDTLFFGNLC 366 + + GKRL + ++ + NLC Sbjct: 96 QISVHGKRLKLGPAIRKQQ----NLC 117
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 50.1 bits (118), Expect = 5e-05 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGL E +L ++FS G+I ++ ++KD + S+GFGFV F + A A Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 283 KNGVELQGKRLAVD 324 NG + G+++ VD Sbjct: 67 MNGKSVDGRQIRVD 80 Score = 41.2 bits (95), Expect = 0.022 Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 4/113 (3%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP----VGFIHFGSRSELDNAIKEMD 822 FVG L + NE L+++F ++G++ V V + + GF+ F + + +A+ M+ Sbjct: 9 FVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMN 68 Query: 823 GKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGR 981 GK+V G Q+ V + +DN+ + R +GG+ + GR Sbjct: 69 GKSVDGR--------QIRVDQAGKSSDNRS-----RGYRGGSAGGRGFFRGGR 108
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 50.1 bits (118), Expect = 5e-05 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGL E +L ++FS G+I ++ ++KD + S+GFGFV F + A A Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 283 KNGVELQGKRLAVD 324 NG + G+++ VD Sbjct: 67 MNGKSVDGRQIRVD 80 Score = 41.2 bits (95), Expect = 0.022 Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 4/113 (3%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP----VGFIHFGSRSELDNAIKEMD 822 FVG L + NE L+++F ++G++ V V + + GF+ F + + +A+ M+ Sbjct: 9 FVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMN 68 Query: 823 GKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGR 981 GK+V G Q+ V + +DN+ + R +GG+ + GR Sbjct: 69 GKSVDGR--------QIRVDQAGKSSDNRS-----RGYRGGSAGGRGFFRGGR 108
>P48809:RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C - Drosophila| melanogaster (Fruit fly) Length = 421 Score = 49.7 bits (117), Expect = 6e-05 Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 1/89 (1%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAER 255 ++ ++ G +VF+GGLP + TE LR F+ G++ ++ IM DQ S+GFGF+ F E Sbjct: 88 QKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSF-EE 146 Query: 256 ECAYIAKRQKNGVELQGKRLAVDLSLDQD 342 E + + + L GK++ + + +D Sbjct: 147 ESSVEHVTNERYINLNGKQVEIKKAEPRD 175 Score = 46.2 bits (108), Expect = 7e-04 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMK-DQNGVSKGFGFVRFAE 252 E+D R K +FVGGL T+ L F G+I+D +MK +++G S+GFGFV FA+ Sbjct: 2 EEDERGK---LFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD 57 Score = 44.3 bits (103), Expect = 0.003 Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 8/175 (4%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 ++ LF G L E + E + F D+I D + N +S S RGF FV F+ Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCR-FGDII--DCVVMKNNESGRS-----RGFGFVTFA 56 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 VL+ G T + G + P + + F+G LP+N E Sbjct: 57 DPTNVNHVLQNGPHT--LDGRTIDPK---PCNPRTLQKPKKGGGYKVFLGGLPSNVTETD 111 Query: 694 LKKLFGRFGEVIRVAV----SRKGQYPVGFIHFGSRSELDNAIKE----MDGKTV 834 L+ F R+G+V V + +K GF+ F S +++ E ++GK V Sbjct: 112 LRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQV 166
>Q99181:HSH49_YEAST Protein HSH49 - Saccharomyces cerevisiae (Baker's yeast)| Length = 213 Score = 49.7 bits (117), Expect = 6e-05 Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 8/125 (6%) Frame = +1 Query: 487 RGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHP-----AINWTERESNVDADEMAKIRT 651 +G+AF+ F + G A ++I + T + ++ + T SN+ D + I Sbjct: 50 QGYAFIEFYNQGDAQYAIKIMNNTVRLYDRLIKVRQVTNSTGTTNLPSNISKDMILPIAK 109 Query: 652 AFVGNLPANANEDYLKKLFGRFGEVIR---VAVSRKGQYPVGFIHFGSRSELDNAIKEMD 822 F+ NL + + D L K+F +FG++IR + G+ +++F + D AIK ++ Sbjct: 110 LFIKNLADSIDSDQLVKIFNKFGKLIREPEIFYLSNGKLKCAYVYFEDFEKADLAIKSLN 169 Query: 823 GKTVS 837 + V+ Sbjct: 170 NQLVA 174
>P84586:HNRPG_RAT Heterogeneous nuclear ribonucleoprotein G - Rattus norvegicus (Rat)| Length = 388 Score = 49.7 bits (117), Expect = 6e-05 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++F+GGL E L +F G IV++ +MKD + S+GF FV F A R Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68 Query: 283 KNGVELQGKRLAVD 324 NG L GK + V+ Sbjct: 69 MNGKSLDGKAIKVE 82 Score = 43.5 bits (101), Expect = 0.004 Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 10/135 (7%) Frame = +1 Query: 619 VDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ----YPVGFIHFGS 786 V+AD K+ F+G L NE L+ +FG++G ++ + + + + F+ F S Sbjct: 2 VEADRPGKL---FIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFES 58 Query: 787 RSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNK------RSREEVKTRRSNV 948 ++ + ++M+GK++ G + K++ +P+ E+ + RSR + R Sbjct: 59 PADAKDVARDMNGKSLD----GKAIKVE-QATKPSFESGRRGPPPPPRSRGPPRGLRGGS 113 Query: 949 SGGKPDYSHGRYGHD 993 G + S G Y D Sbjct: 114 GGTRGPPSRGGYMDD 128
>Q20870:DAZ1_CAEEL DAZ protein 1 - Caenorhabditis elegans| Length = 499 Score = 49.7 bits (117), Expect = 6e-05 Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRF-AERECAYIAKRQK 285 +FVGG P S TE LRE F + D++++K +G SKG+GF+ F E + I K Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIRKLTP 128 Query: 286 NGVELQGKRL 315 +E + ++L Sbjct: 129 KQLEFRSRKL 138
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 49.7 bits (117), Expect = 6e-05 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGL E L ++FS G+I ++ ++KD + S+GFGFV F + A A Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 283 KNGVELQGKRLAVD 324 NG + G+++ VD Sbjct: 67 MNGKSVDGRQIRVD 80 Score = 41.2 bits (95), Expect = 0.022 Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 4/113 (3%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP----VGFIHFGSRSELDNAIKEMD 822 FVG L + NE L+++F ++G++ V V + + GF+ F + + +A+ M+ Sbjct: 9 FVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMN 68 Query: 823 GKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGR 981 GK+V G Q+ V + +DN+ + R +GG+ + GR Sbjct: 69 GKSVDGR--------QIRVDQAGKSSDNRS-----RGYRGGSAGGRGFFRGGR 108
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 49.7 bits (117), Expect = 6e-05 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGL E L ++FS G+I ++ ++KD + S+GFGFV F + A A Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 283 KNGVELQGKRLAVD 324 NG + G+++ VD Sbjct: 67 MNGKSVDGRQIRVD 80 Score = 41.2 bits (95), Expect = 0.022 Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 4/113 (3%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP----VGFIHFGSRSELDNAIKEMD 822 FVG L + NE L+++F ++G++ V V + + GF+ F + + +A+ M+ Sbjct: 9 FVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMN 68 Query: 823 GKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGR 981 GK+V G Q+ V + +DN+ + R +GG+ + GR Sbjct: 69 GKSVDGR--------QIRVDQAGKSSDNRS-----RGYRGGSAGGRGFFRGGR 108
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 49.7 bits (117), Expect = 6e-05 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++FVGGL E L ++FS G+I ++ ++KD + S+GFGFV F + A A Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 283 KNGVELQGKRLAVD 324 NG + G+++ VD Sbjct: 67 MNGKSVDGRQIRVD 80 Score = 41.2 bits (95), Expect = 0.022 Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 4/113 (3%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYP----VGFIHFGSRSELDNAIKEMD 822 FVG L + NE L+++F ++G++ V V + + GF+ F + + +A+ M+ Sbjct: 9 FVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMN 68 Query: 823 GKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVSGGKPDYSHGR 981 GK+V G Q+ V + +DN+ + R +GG+ + GR Sbjct: 69 GKSVDGR--------QIRVDQAGKSSDNRS-----RGYRGGSAGGRGFFRGGR 108
>Q24207:BOULE_DROME Protein boule - Drosophila melanogaster (Fruit fly)| Length = 228 Score = 49.7 bits (117), Expect = 6e-05 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 10/70 (14%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRF----------AERE 258 +FVGG+ TE L +FS G + +I+ D+ GVSKG+GFV F A+ E Sbjct: 35 IFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETEQEAQRLQADGE 94 Query: 259 CAYIAKRQKN 288 C + R+ N Sbjct: 95 CVVLRDRKLN 104
>O14102:SAP49_SCHPO Spliceosome-associated protein 49 - Schizosaccharomyces pombe| (Fission yeast) Length = 335 Score = 49.3 bits (116), Expect = 8e-05 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 4/91 (4%) Frame = +1 Query: 82 QDRRVK---GAEVFVGGLPRSATEGTLREIFSTCGEIVDL-RIMKDQNGVSKGFGFVRFA 249 QDR V GA +FVG L E L + FS G++V ++ +D+NG SKG+GFV + Sbjct: 89 QDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYD 148 Query: 250 ERECAYIAKRQKNGVELQGKRLAVDLSLDQD 342 E A A N L K + V + ++ Sbjct: 149 SFETADAAIEAMNNQFLMNKPITVSYAFKRE 179
>Q7SG09:MRD1_NEUCR Multiple RNA-binding domain-containing protein 1 - Neurospora| crassa Length = 827 Score = 49.3 bits (116), Expect = 8e-05 Identities = 27/82 (32%), Positives = 43/82 (52%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 +G ++ V LP T+ +R +FS G++V LRI K N S+GF F F+ + A A Sbjct: 702 QGTKLVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQSSRGFAFAEFSTAKEALNAF 761 Query: 277 RQKNGVELQGKRLAVDLSLDQD 342 + G+RL +D + +D Sbjct: 762 NSLKDTHILGRRLVIDFAQAED 783 Score = 37.7 bits (86), Expect = 0.25 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 10/140 (7%) Frame = +1 Query: 556 TDFMLGGILHPAI-NWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIR 732 TD G+ P++ + ER+ DA+E + + FV NL + L F ++ Sbjct: 571 TDARPAGVQKPSVADLLERD---DAEEQLETSSLFVRNLNFSTTSQGLTDAFKHLDGFVQ 627 Query: 733 VAVSRK------GQY---PVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVAR 885 V K GQ GF+ F ++ + A+K MDG+ + + KI V + Sbjct: 628 AKVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQAALKVMDGQVLD------AHKISVKASH 681 Query: 886 PAVENDNKRSREEVKTRRSN 945 ++ +R RE++ + +N Sbjct: 682 RGLDAAEERRREDMAKKAAN 701
>Q6CQR6:MRD1_KLULA Multiple RNA-binding domain-containing protein 1 - Kluyveromyces| lactis (Yeast) (Candida sphaerica) Length = 878 Score = 49.3 bits (116), Expect = 8e-05 Identities = 38/146 (26%), Positives = 71/146 (48%) Frame = +1 Query: 49 RRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKG 228 R+ S + + ++ ++ V LP AT + E+FS+ G++ +R+ K + ++G Sbjct: 734 RQGTSTTNASSKKKKKNQGKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARG 793 Query: 229 FGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHK 408 F FV F + A A Q GV L G+RL ++ ++QD E ++ E++ K Sbjct: 794 FAFVEFLLPKEAENAMDQLQGVHLLGRRLVMEF-VEQD--------PEDVEQQIEKMTRK 844 Query: 409 TFKDVISVDLAMAPNLDSSTSKRRLN 486 K V + +A N + KR+++ Sbjct: 845 VKKQVNTTKIANMRN----SGKRKID 866 Score = 37.0 bits (84), Expect = 0.42 Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Frame = +1 Query: 31 EEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD- 207 EE +++ S + + R G +F+ + +ATE R++FS GE+ ++ I D Sbjct: 307 EETEVETSQESEEEKSLKKIRETG-RLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDT 365 Query: 208 QNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAV 321 + G SKGF +V F + A A + + QG+ L + Sbjct: 366 RTGQSKGFAYVLFKNADNAATAFVELDKQIFQGRLLHI 403 Score = 36.6 bits (83), Expect = 0.55 Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 6/172 (3%) Frame = +1 Query: 343 TLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHG 522 ++F NL ++++ E K F + + P D + L+ GF F F + Sbjct: 652 SIFIKNLNFSTTSQQLTEKF-KPFNGFVVAQVKTKP--DPKQPGKTLSMGFGFAEFKTKE 708 Query: 523 AAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTA---FVGNLPANANEDY 693 A V+ T + G L ++ + S +A K + V NLP A Sbjct: 709 QANAVISAMEGT-ILDGHKLQLKLSHRQGTSTTNASSKKKKKNQGKIIVKNLPFEATRKD 767 Query: 694 LKKLFGRFGEVIRVAVSR---KGQYPVGFIHFGSRSELDNAIKEMDGKTVSG 840 + +LF FG++ V V + K F+ F E +NA+ ++ G + G Sbjct: 768 VFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQGVHLLG 819 Score = 33.9 bits (76), Expect = 3.5 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 11/87 (12%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFS-----------TCGEIVDLRIMKDQNGVSKGFGFVRFA 249 + V V GLP E LR++ + D+++MK+++G S+ F F+ F Sbjct: 2 SRVIVKGLPIYLKEDRLRDLIEKRLTQKHQSTDVQSYLSDVKLMKNRDGESRRFAFIGFR 61 Query: 250 ERECAYIAKRQKNGVELQGKRLAVDLS 330 + E A+ NG + ++ V ++ Sbjct: 62 DEEDAFDCVNYFNGTFVDTSKIEVSMA 88
>Q9BGN8:DAZL_CALJA Deleted in azoospermia-like - Callithrix jacchus (Common marmoset)| Length = 296 Score = 49.3 bits (116), Expect = 8e-05 Identities = 30/107 (28%), Positives = 53/107 (49%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD 207 RE AA+ Y + ++ VFVGG+ E +R F+ G + +++I+ D Sbjct: 15 REANTQSSSAATSQGYVLPEGKIMPNTVFVGGIDVRMDETEIRGFFARYGSVKEVKIITD 74 Query: 208 QNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDTL 348 + GVSKG+GFV F + K ++ + GK+L + ++ + L Sbjct: 75 RTGVSKGYGFVSFFND--VDVQKIVESQINFHGKKLKLGPAIRKQNL 119
>Q6P0B1:CELF2_DANRE CUG-BP- and ETR-3-like factor 2 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 514 Score = 49.3 bits (116), Expect = 8e-05 Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%) Frame = +1 Query: 55 AASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSK 225 A H D + D ++FVG +PRS +E L+E+F G + + I++D++ SK Sbjct: 32 ALEHSDQPDPD----AIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSK 87 Query: 226 GFGFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEW 375 G FV F R+ A A+ + ++ L G + + +++ LF G + K+ Sbjct: 88 GCCFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKC 147 Query: 376 SAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSR 555 + + ++ + + + P+ L+RG AFV FS+ A ++ + Sbjct: 148 NENDI-RVMFSPYGQIEECRILRGPD--------GLSRGCAFVTFSTRAMAQNAIKAMHQ 198 Query: 556 TDFMLG 573 + M G Sbjct: 199 SQTMEG 204 Score = 42.4 bits (98), Expect = 0.010 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 +GA +F+ LP+ + + ++F G +V ++ D Q +SK FGFV + A A Sbjct: 427 EGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 486 Query: 274 KRQKNGVELQGKRLAVDL 327 + NG ++ KRL V L Sbjct: 487 IQAMNGFQIGMKRLKVQL 504 Score = 40.4 bits (93), Expect = 0.038 Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 4/173 (2%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G + + WS +E +EL + + V +++ + + SK G FV F Sbjct: 42 DAIKMFVGQIPRSWSEKELKELF-EPYGAVYQINILRDRSQNPPQSK-----GCCFVTFY 95 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + AA + G +H I +S + + R F+G + NE+ Sbjct: 96 TRKAALEAQNALHNIKTLTG--MHHPIQMKPADS--EKSNAVEDRKLFIGMVSKKCNEND 151 Query: 694 LKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEM-DGKTVSG 840 ++ +F +G++ + R F+ F +R+ NAIK M +T+ G Sbjct: 152 IRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEG 204
>Q92879:CELF1_HUMAN CUG-BP- and ETR-3-like factor 1 - Homo sapiens (Human)| Length = 486 Score = 49.3 bits (116), Expect = 8e-05 Identities = 44/207 (21%), Positives = 94/207 (45%), Gaps = 14/207 (6%) Frame = +1 Query: 64 HGDYDEQDRR-VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSKGF 231 +G D D+ + ++FVG +PR+ +E LRE+F G + ++ +++D++ SKG Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61 Query: 232 GFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEWSA 381 FV F R+ A A+ + ++ L G + + +++ LF G + K+ + Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTE 121 Query: 382 EEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTD 561 + ++ +F + + P+ L+RG AFV F++ A ++ + Sbjct: 122 NDI-RVMFSSFGQIEECRILRGPD--------GLSRGCAFVTFTTRAMAQTAIKAMHQAQ 172 Query: 562 FMLGGILHPAINWTERESNVDADEMAK 642 M G + + + + + + MA+ Sbjct: 173 TMEGCSSPMVVKFADTQKDKEQKRMAQ 199 Score = 44.3 bits (103), Expect = 0.003 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = +1 Query: 61 SHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGF 237 S G Q +GA +F+ LP+ + L ++F G +V ++ D Q +SK FGF Sbjct: 387 SIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGF 446 Query: 238 VRFAERECAYIAKRQKNGVELQGKRLAVDL 327 V + A A + NG ++ KRL V L Sbjct: 447 VSYDNPVSAQAAIQSMNGFQIGMKRLKVQL 476 Score = 39.7 bits (91), Expect = 0.065 Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 4/211 (1%) Frame = +1 Query: 331 LDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRF 510 LD +F G + + WS ++ EL + + V +++ + + SK G FV F Sbjct: 13 LDAIKMFVGQVPRTWSEKDLRELFEQ-YGAVYEINVLRDRSQNPPQSK-----GCCFVTF 66 Query: 511 SSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANED 690 + AA +L G+ HP + ++ + + + R F+G + E+ Sbjct: 67 YTRKAALEAQNALHNMK-VLPGMHHPI---QMKPADSEKNNAVEDRKLFIGMISKKCTEN 122 Query: 691 YLKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEM-DGKTVSGPNRGPS 858 ++ +F FG++ + R F+ F +R+ AIK M +T+ G S Sbjct: 123 DIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTM----EGCS 178 Query: 859 FKIQVSVARPAVENDNKRSREEVKTRRSNVS 951 + V A + + KR ++++ + +S Sbjct: 179 SPMVVKFADTQKDKEQKRMAQQLQQQMQQIS 209
>Q6DJI9:ZCRB1_XENLA Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Xenopus laevis (African clawed frog) Length = 218 Score = 48.9 bits (115), Expect = 1e-04 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNG-VSKGFGFVRFAERECAYIAKRQK 285 V+V LP S T L IFS G++V + I+KD++ SKG FV F ++E A R Sbjct: 12 VYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRKSKGVSFVLFLDKESAQNCVRGL 71 Query: 286 NGVELQGKRLAVDLSLD 336 N +L G+ + ++ D Sbjct: 72 NNKQLFGRAIKASIAKD 88
>Q24668:SXL_DROSU Protein sex-lethal - Drosophila subobscura (Fruit fly)| Length = 354 Score = 48.9 bits (115), Expect = 1e-04 Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 7/159 (4%) Frame = +1 Query: 85 DRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAEREC 261 D+R + V LP+ T+ L +F G I RIM+D + G S G+ FV F Sbjct: 121 DQRSSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 180 Query: 262 AYIAKRQKNGVELQGKRLAVDL------SLDQDTLFFGNLCKEWSAEEFEELIHKTFKDV 423 + A + NG+ ++ KRL V S+ L+ NL + + ++ + + K + + Sbjct: 181 SQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGK-YGSI 239 Query: 424 ISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 + ++ D T + RG AFVR++ A + Sbjct: 240 VQKNILR----DKLTGR---PRGVAFVRYNKREEAQEAI 271 Score = 38.9 bits (89), Expect = 0.11 Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 10/136 (7%) Frame = +1 Query: 490 GFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDAD------EMAKIRT 651 G+AFV F+S + R +++ L GI T R + E K Sbjct: 169 GYAFVDFTSEMDSQRAIKV-------LNGI-------TVRNKRLKVSYARPGGESIKDTN 214 Query: 652 AFVGNLPANANEDYLKKLFGRFGEVIRVAVSRK----GQYPVGFIHFGSRSELDNAIKEM 819 +V NLP +D L +FG++G +++ + R V F+ + R E AI + Sbjct: 215 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 274 Query: 820 DGKTVSGPNRGPSFKI 867 + G ++ S ++ Sbjct: 275 NNVIPEGGSQPLSVRL 290
>P15771:NUCL_CHICK Nucleolin - Gallus gallus (Chicken)| Length = 694 Score = 48.9 bits (115), Expect = 1e-04 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 1/91 (1%) Frame = +1 Query: 61 SHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGF 237 + G +++Q + + FV GL TE TLRE F + RI+ D++ G SKGFGF Sbjct: 544 ARGGFNQQSKTL-----FVRGLSEDTTEETLRESFEGS---ISARIVTDRDTGSSKGFGF 595 Query: 238 VRFAERECAYIAKRQKNGVELQGKRLAVDLS 330 V F+ E A AK E+ G ++ +D + Sbjct: 596 VDFSSPEDAKAAKEAMEDGEIDGNKVTLDFA 626
>Q6FXP4:MRD1_CANGA Multiple RNA-binding domain-containing protein 1 - Candida glabrata| (Yeast) (Torulopsis glabrata) Length = 861 Score = 48.9 bits (115), Expect = 1e-04 Identities = 28/94 (29%), Positives = 50/94 (53%) Frame = +1 Query: 40 KMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGV 219 K+ R + G ++ ++ K ++ V LP AT + E+F++ G++ +R+ K + Sbjct: 719 KLSHRQGNAGS--QEKKKAKNGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKS 776 Query: 220 SKGFGFVRFAERECAYIAKRQKNGVELQGKRLAV 321 ++GF FV F + A A Q GV L G+RL + Sbjct: 777 ARGFAFVEFVLPKEAENAMDQLQGVHLLGRRLVM 810 Score = 41.6 bits (96), Expect = 0.017 Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 18/294 (6%) Frame = +1 Query: 97 KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIA 273 K +F+ + S+TE +++FS GE+ ++ + D + G SKGF +V FA+ E A A Sbjct: 323 KTGRLFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQA 382 Query: 274 KRQKNGVELQGKRLAV-------DLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISV 432 + + QG+ L + D LD+ L L K+ ++ TF S+ Sbjct: 383 YIELDKQIFQGRLLHILAADEMKDHRLDEFDLKNMPLKKQRELKKKAAASKATF-SWNSL 441 Query: 433 DLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR----IGS-RTDFMLGGILHPAIN 597 + L S +K + + +S+ A + L IG R F G+ Sbjct: 442 YMNQDAVLGSVAAKLGVQKADLIDPENSNSAVKQALAEAHVIGDVRKYFETKGV------ 495 Query: 598 WTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQYPVGFIH 777 + SN+ + R V N P + L +LF FG++ R+ + G + + Sbjct: 496 DLTKFSNLKSPSQRDDRVILVKNFPFGTTREELGELFVPFGKLERLLMPPAG--TIAIVQ 553 Query: 778 FGSRSELDNAIKEMDGKTVSGP----NRGPSFKIQVSVA-RPAVENDNKRSREE 924 F + +A ++ K G +GP + + A+E+D ++S +E Sbjct: 554 FRDIASGRSAFSKLAFKRFKGTVIYLEKGPKDCFTKAASNEDAMEHDEEKSAKE 607 Score = 40.4 bits (93), Expect = 0.038 Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 6/172 (3%) Frame = +1 Query: 343 TLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHG 522 ++F NL + ++++ + K F + + P D + L+ GF FV F + Sbjct: 641 SIFIKNLNFKTTSQQLTDRF-KVFSGFVVAQVKTKP--DPKQKNKVLSMGFGFVEFRTKE 697 Query: 523 AAARVLRIGSRTDFMLGGILHPA-INWTERESNVDADEMAKIRTA--FVGNLPANANEDY 693 A V+ T ++ G H + + R+ N + E K + V NLP A Sbjct: 698 QATAVISAMDGT--VIDG--HKIQLKLSHRQGNAGSQEKKKAKNGKIIVKNLPFEATRKD 753 Query: 694 LKKLFGRFGEVIRVAVSR---KGQYPVGFIHFGSRSELDNAIKEMDGKTVSG 840 + +LF FG++ V V + K F+ F E +NA+ ++ G + G Sbjct: 754 VFELFNSFGQLKSVRVPKKFDKSARGFAFVEFVLPKEAENAMDQLQGVHLLG 805 Score = 36.2 bits (82), Expect = 0.71 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFS-----------TCGEIVDLRIMKDQNGVSKGFGFVRFA 249 + V V GLP TE L++ F+ G I DLRI+K++ G S+ F F+ + Sbjct: 2 SRVIVKGLPIYLTEPELQKHFNKRLITTHATSNVDGLITDLRILKNREGKSRRFAFIGYK 61 Query: 250 ERECAYIAKRQKNGVELQGKRLAVDLS 330 + A A +G + ++ VD++ Sbjct: 62 NEQDALDAVNYFDGSFIYTSKIEVDMA 88
>Q4WJT7:MRD1_ASPFU Multiple RNA-binding domain-containing protein 1 - Aspergillus| fumigatus (Sartorya fumigata) Length = 825 Score = 48.9 bits (115), Expect = 1e-04 Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 16/272 (5%) Frame = +1 Query: 46 DRRAASHGDYDEQ--DRRVK----GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD 207 D +AA +E+ D ++ + +FV LP A+E L +FS G+I ++ + D Sbjct: 276 DDKAAVESSVEEEEVDTNIEHIRLSSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFD 335 Query: 208 -QNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAV-------DLSLDQDTLFFGNL 363 ++ SKGF +V++ E + A A ++ +G QG+ + + +D+ L L Sbjct: 336 TRSTTSKGFAYVQYIEPDAAVQAYKELDGKHFQGRLMHILPATAKKTYKIDEHELSKLPL 395 Query: 364 CKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLR 543 K+ + E TF L M + S+ RL A + A A V + Sbjct: 396 KKQKQIKRKLEASSSTFS---WNSLYMNTDAVMSSVAERLGVSKADL-LDPTSADAAVKQ 451 Query: 544 IGSRTDFMLGGILHPAINWTERESNVDA-DEMAKIRTA-FVGNLPANANEDYLKKLFGRF 717 + T I +T N+DA + + TA V N D L+KLF + Sbjct: 452 AHAETHV----IQETKAYFTANGVNLDAFKQRERGNTAILVKNFSYGVKVDDLRKLFEPY 507 Query: 718 GEVIRVAVSRKGQYPVGFIHFGSRSELDNAIK 813 G++ R+ + G + + F E A K Sbjct: 508 GQITRLLMPPSG--TIAIVEFARPDEAQKAFK 537 Score = 42.4 bits (98), Expect = 0.010 Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 9/175 (5%) Frame = +1 Query: 343 TLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHG 522 TLF NL + E F E + K +S + P D + L+ GF FV F + Sbjct: 598 TLFVKNLNFSTTNERFTE-VFKPLDGFVSARIKTKP--DPKRPGKTLSMGFGFVDFRTKA 654 Query: 523 AAARVLRI--GSRTDF--MLGGILHPAINWTERESNVD-ADEMAKIRTAFV-GNLPANAN 684 A L G + D ++ + A++ E D A ++A RT + NLP A Sbjct: 655 QAQAALAAMDGYKLDQHELVVRASNKAMDAAEERRREDTAKKIAARRTKIIIKNLPFQAT 714 Query: 685 EDYLKKLFGRFGEVIRVAVSRK---GQYPVGFIHFGSRSELDNAIKEMDGKTVSG 840 + ++ LFG +G++ V V +K GF F S E +NA+ + + G Sbjct: 715 KKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDALKNTHLLG 769 Score = 39.7 bits (91), Expect = 0.065 Identities = 20/78 (25%), Positives = 39/78 (50%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQK 285 ++ + LP AT+ +R +F G++ +R+ K + ++GFGF F A A Sbjct: 703 KIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDAL 762 Query: 286 NGVELQGKRLAVDLSLDQ 339 L G+RL ++ + ++ Sbjct: 763 KNTHLLGRRLVLEFANEE 780 Score = 38.1 bits (87), Expect = 0.19 Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 10/164 (6%) Frame = +1 Query: 604 ERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEV--IRVAVSRKGQYPVGF-- 771 E E + + + + FV NLP +A+E L+ +F +FG++ I VA + GF Sbjct: 287 EEEVDTNIEHIRLSSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAY 346 Query: 772 IHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNKRSREEVKTRRSNVS 951 + + A KE+DGK +G I + A+ + D + ++ ++ Sbjct: 347 VQYIEPDAAVQAYKELDGKHF----QGRLMHILPATAKKTYKID-EHELSKLPLKKQKQI 401 Query: 952 GGKPDYSHGRYGHDSLDRQTK------APRLSNMVADVTDPYEA 1065 K + S + +SL T A RL AD+ DP A Sbjct: 402 KRKLEASSSTFSWNSLYMNTDAVMSSVAERLGVSKADLLDPTSA 445 Score = 34.7 bits (78), Expect = 2.1 Identities = 23/84 (27%), Positives = 40/84 (47%) Frame = +1 Query: 94 VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIA 273 ++ VFV GLP + T LR FS+ +I D ++ + GFV F E A A Sbjct: 1 MENTRVFVSGLPPTFTNDQLRMHFSSRFQITDAHVLP-----KRRIGFVGFKSSEAAQQA 55 Query: 274 KRQKNGVELQGKRLAVDLSLDQDT 345 N ++ +++V+++ D+ Sbjct: 56 ASYFNKTYVKMSKISVEIAKPIDS 79
>Q03250:GRP7_ARATH Glycine-rich RNA-binding protein 7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 176 Score = 48.9 bits (115), Expect = 1e-04 Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Frame = +1 Query: 112 FVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQKN 288 FVGGL + + L F+ G+++D +I+ D + G S+GFGFV F + + A N Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70 Query: 289 GVELQGKRLAVD 324 G +L G+ + V+ Sbjct: 71 GQDLDGRSITVN 82
>Q64368:DAZL_MOUSE Deleted in azoospermia-like - Mus musculus (Mouse)| Length = 298 Score = 48.9 bits (115), Expect = 1e-04 Identities = 29/107 (27%), Positives = 52/107 (48%) Frame = +1 Query: 28 REEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD 207 RE A + Y + ++ VFVGG+ E +R F+ G + +++I+ D Sbjct: 15 REASTQSSSATTSQGYVLPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITD 74 Query: 208 QNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQDTL 348 + GVSKG+GFV F + K ++ + GK+L + ++ + L Sbjct: 75 RTGVSKGYGFVSFYND--VDVQKIVESQINFHGKKLKLGPAIRKQNL 119
>Q4QQT3:CELF1_RAT CUG-BP- and ETR-3-like factor 1 - Rattus norvegicus (Rat)| Length = 487 Score = 48.9 bits (115), Expect = 1e-04 Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 14/207 (6%) Frame = +1 Query: 64 HGDYDEQDRR-VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSKGF 231 +G D D+ + ++FVG +PR+ +E LRE+F G + ++ I++D++ SKG Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 61 Query: 232 GFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEWSA 381 FV F R+ A A+ + ++ L G + + +++ LF G + K+ + Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTE 121 Query: 382 EEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTD 561 + ++ +F + + P+ L+RG AFV F++ A ++ + Sbjct: 122 NDI-RVMFSSFGQIEECRILRGPD--------GLSRGCAFVTFTTRTMAQTAIKAMHQAQ 172 Query: 562 FMLGGILHPAINWTERESNVDADEMAK 642 M G + + + + + + MA+ Sbjct: 173 TMEGCSSPMVVKFADTQKDKEQKRMAQ 199 Score = 44.3 bits (103), Expect = 0.003 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = +1 Query: 61 SHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGF 237 S G Q +GA +F+ LP+ + L ++F G +V ++ D Q +SK FGF Sbjct: 388 SIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGF 447 Query: 238 VRFAERECAYIAKRQKNGVELQGKRLAVDL 327 V + A A + NG ++ KRL V L Sbjct: 448 VSYDNPVSAQAAIQSMNGFQIGMKRLKVQL 477 Score = 40.0 bits (92), Expect = 0.049 Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 4/211 (1%) Frame = +1 Query: 331 LDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRF 510 LD +F G + + WS ++ EL + + V +++ + + SK G FV F Sbjct: 13 LDAIKMFVGQVPRTWSEKDLRELFEQ-YGAVYEINILRDRSQNPPQSK-----GCCFVTF 66 Query: 511 SSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANED 690 + AA +L G+ HP + ++ + + + R F+G + E+ Sbjct: 67 YTRKAALEAQNALHNMK-VLPGMHHPI---QMKPADSEKNNAVEDRKLFIGMISKKCTEN 122 Query: 691 YLKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEM-DGKTVSGPNRGPS 858 ++ +F FG++ + R F+ F +R+ AIK M +T+ G S Sbjct: 123 DIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTM----EGCS 178 Query: 859 FKIQVSVARPAVENDNKRSREEVKTRRSNVS 951 + V A + + KR ++++ + +S Sbjct: 179 SPMVVKFADTQKDKEQKRMAQQLQQQMQQIS 209
>P28659:CELF1_MOUSE CUG-BP- and ETR-3-like factor 1 - Mus musculus (Mouse)| Length = 486 Score = 48.9 bits (115), Expect = 1e-04 Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 14/207 (6%) Frame = +1 Query: 64 HGDYDEQDRR-VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSKGF 231 +G D D+ + ++FVG +PR+ +E LRE+F G + ++ I++D++ SKG Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 61 Query: 232 GFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEWSA 381 FV F R+ A A+ + ++ L G + + +++ LF G + K+ + Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTE 121 Query: 382 EEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTD 561 + ++ +F + + P+ L+RG AFV F++ A ++ + Sbjct: 122 NDI-RVMFSSFGQIEECRILRGPD--------GLSRGCAFVTFTTRTMAQTAIKAMHQAQ 172 Query: 562 FMLGGILHPAINWTERESNVDADEMAK 642 M G + + + + + + MA+ Sbjct: 173 TMEGCSSPMVVKFADTQKDKEQKRMAQ 199 Score = 44.3 bits (103), Expect = 0.003 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = +1 Query: 61 SHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGF 237 S G Q +GA +F+ LP+ + L ++F G +V ++ D Q +SK FGF Sbjct: 387 SIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGF 446 Query: 238 VRFAERECAYIAKRQKNGVELQGKRLAVDL 327 V + A A + NG ++ KRL V L Sbjct: 447 VSYDNPVSAQAAIQSMNGFQIGMKRLKVQL 476 Score = 40.0 bits (92), Expect = 0.049 Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 4/211 (1%) Frame = +1 Query: 331 LDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRF 510 LD +F G + + WS ++ EL + + V +++ + + SK G FV F Sbjct: 13 LDAIKMFVGQVPRTWSEKDLRELFEQ-YGAVYEINILRDRSQNPPQSK-----GCCFVTF 66 Query: 511 SSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANED 690 + AA +L G+ HP + ++ + + + R F+G + E+ Sbjct: 67 YTRKAALEAQNALHNMK-VLPGMHHPI---QMKPADSEKNNAVEDRKLFIGMISKKCTEN 122 Query: 691 YLKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEM-DGKTVSGPNRGPS 858 ++ +F FG++ + R F+ F +R+ AIK M +T+ G S Sbjct: 123 DIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTM----EGCS 178 Query: 859 FKIQVSVARPAVENDNKRSREEVKTRRSNVS 951 + V A + + KR ++++ + +S Sbjct: 179 SPMVVKFADTQKDKEQKRMAQQLQQQMQQIS 209
>P19339:SXL_DROME Protein sex-lethal - Drosophila melanogaster (Fruit fly)| Length = 354 Score = 48.5 bits (114), Expect = 1e-04 Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 7/159 (4%) Frame = +1 Query: 85 DRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAEREC 261 D R + V LP+ T+ L +F G I RIM+D + G S G+ FV F Sbjct: 119 DPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 178 Query: 262 AYIAKRQKNGVELQGKRLAVDL------SLDQDTLFFGNLCKEWSAEEFEELIHKTFKDV 423 + A + NG+ ++ KRL V S+ L+ NL + + ++ + + K + + Sbjct: 179 SQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGK-YGSI 237 Query: 424 ISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 + ++ D T + RG AFVR++ A + Sbjct: 238 VQKNILR----DKLTGR---PRGVAFVRYNKREEAQEAI 269 Score = 38.9 bits (89), Expect = 0.11 Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 10/136 (7%) Frame = +1 Query: 490 GFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDAD------EMAKIRT 651 G+AFV F+S + R +++ L GI T R + E K Sbjct: 167 GYAFVDFTSEMDSQRAIKV-------LNGI-------TVRNKRLKVSYARPGGESIKDTN 212 Query: 652 AFVGNLPANANEDYLKKLFGRFGEVIRVAVSRK----GQYPVGFIHFGSRSELDNAIKEM 819 +V NLP +D L +FG++G +++ + R V F+ + R E AI + Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272 Query: 820 DGKTVSGPNRGPSFKI 867 + G ++ S ++ Sbjct: 273 NNVIPEGGSQPLSVRL 288
>P19683:ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 315 Score = 48.5 bits (114), Expect = 1e-04 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Frame = +1 Query: 52 RAASHGDYDEQDRRV--KGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVS 222 +AA G+ E+ R + ++VG +P + L ++FS G++V R++ D + G S Sbjct: 211 KAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRS 270 Query: 223 KGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQ 339 +GFGFV A A +G L G+ + V+++ D+ Sbjct: 271 RGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDR 309 Score = 45.1 bits (105), Expect = 0.002 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 7/172 (4%) Frame = +1 Query: 346 LFFGNLCKEWSAEEFEELIHKTFKDVISVDLA-MAPNLDSSTSKRRLNRGFAFVRFSSHG 522 LF GNL + +E L F+ V++A + N D+ S RGF FV S+ Sbjct: 138 LFVGNLPYDVDSEGLARL----FEQAGVVEIAEVIYNRDTDQS-----RGFGFVTMSTVE 188 Query: 523 AAARVLRIGSRTDFMLGGIL--HPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYL 696 A + + + +R D + G +L + A ER R +VGN+P ++ L Sbjct: 189 EAEKAVEMYNRYD-VNGRLLTVNKAARRGERPERPPRTFEQSYRI-YVGNIPWGIDDARL 246 Query: 697 KKLFGRFGEVI--RVAVSRKG--QYPVGFIHFGSRSELDNAIKEMDGKTVSG 840 ++LF G+V+ RV R+ GF+ S +E+ +AI +DG+++ G Sbjct: 247 EQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDG 298 Score = 35.4 bits (80), Expect = 1.2 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCG--EIVDLRIMKDQNGVSKGFGFVRFAERECAYIAK 276 A++FVG LP L +F G EI ++ +D + S+GFGFV + E A A Sbjct: 136 AKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQ-SRGFGFVTMSTVEEAEKAV 194 Query: 277 RQKNGVELQGKRLAVD 324 N ++ G+ L V+ Sbjct: 195 EMYNRYDVNGRLLTVN 210
>Q9Y580:RBM7_HUMAN RNA-binding protein 7 - Homo sapiens (Human)| Length = 266 Score = 48.5 bits (114), Expect = 1e-04 Identities = 24/71 (33%), Positives = 37/71 (52%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +FVG L TE L E+F G ++ ++I KD++G K F FV F A N Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLN 71 Query: 289 GVELQGKRLAV 321 G++L G+ + + Sbjct: 72 GIKLYGRPIKI 82
>O35479:HNRPG_MOUSE Heterogeneous nuclear ribonucleoprotein G - Mus musculus (Mouse)| Length = 388 Score = 48.5 bits (114), Expect = 1e-04 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++F+GGL E L +F G IV++ +MKD + S+GF FV A A R Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARD 68 Query: 283 KNGVELQGKRLAVD 324 NG L GK + V+ Sbjct: 69 MNGKSLDGKAIKVE 82 Score = 41.6 bits (96), Expect = 0.017 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 10/135 (7%) Frame = +1 Query: 619 VDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ----YPVGFIHFGS 786 V+AD K+ F+G L NE L+ +FG++G ++ + + + + F+ S Sbjct: 2 VEADRPGKL---FIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLES 58 Query: 787 RSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNK------RSREEVKTRRSNV 948 ++ +A ++M+GK++ G + K++ +P E+ + RSR + R Sbjct: 59 PADAKDAARDMNGKSLD----GKAIKVE-QATKPFFESGRRGPPPPPRSRGPPRGLRGGS 113 Query: 949 SGGKPDYSHGRYGHD 993 G + S G Y D Sbjct: 114 GGTRGPPSRGGYMDD 128
>Q640A2:HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-like - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 297 Score = 48.5 bits (114), Expect = 1e-04 Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 6/174 (3%) Frame = +1 Query: 37 PKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-N 213 P + + + ++QD ++F+GGL ++ L E S GE+VD I D Sbjct: 8 PDFNEGSKINASKNQQDE----GKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT 63 Query: 214 GVSKGFGFVRFAER----ECAYIAKRQKNGVELQGKRL-AVDLSLDQDTLFFGNLCKEWS 378 G S+GFGFV F + + + + +G + KR A+ +F G L E + Sbjct: 64 GRSRGFGFVLFKDAVSVDKVLETKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPETT 123 Query: 379 AEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 E+ ++ F ++ +++L M D+ T++R RGF FV ++ ++L Sbjct: 124 EEQIKQYF-GGFGEIENIELPM----DTKTNER---RGFCFVTYTGEEPVKKLL 169 Score = 38.5 bits (88), Expect = 0.14 Identities = 34/131 (25%), Positives = 57/131 (43%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D+ +F G L + S ++ E + + F +V+ + P S RGF FV F Sbjct: 24 DEGKMFIGGLSWDTSKKDLTEYLSR-FGEVVDCTIKTDPVTGRS-------RGFGFVLFK 75 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + +VL ++ + G ++ P +R + E K FVG L E+ Sbjct: 76 DAVSVDKVLE--TKEHKLDGKLIDP-----KRAKALKGKEPPK--KVFVGGLSPETTEEQ 126 Query: 694 LKKLFGRFGEV 726 +K+ FG FGE+ Sbjct: 127 IKQYFGGFGEI 137
>O43040:CTF1_SCHPO Cleavage and termination factor 1 - Schizosaccharomyces pombe| (Fission yeast) Length = 363 Score = 48.5 bits (114), Expect = 1e-04 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAK 276 G VFVG +P +E + EIF+ G + +++ D + G KG+GF F + E +A Sbjct: 6 GNVVFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAV 65 Query: 277 RQKNGVELQGKRLAVD 324 R+ N EL +++ V+ Sbjct: 66 RKLNNSELGPRKIRVE 81
>Q499V6:ZCRB1_RAT Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Rattus norvegicus (Rat) Length = 217 Score = 48.1 bits (113), Expect = 2e-04 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 V+V LP S T L IFS G++V + IMKD++ SKG F+ F +++ A R Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71 Query: 286 NGVELQGKRLAVDLSLD 336 N +L G+ + +++D Sbjct: 72 NNKQLFGRVIKASIAID 88
>Q9CZ96:ZCRB1_MOUSE Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Mus musculus (Mouse) Length = 217 Score = 48.1 bits (113), Expect = 2e-04 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 V+V LP S T L IFS G++V + IMKD++ SKG F+ F +++ A R Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71 Query: 286 NGVELQGKRLAVDLSLD 336 N +L G+ + +++D Sbjct: 72 NNKQLFGRVIKASIAID 88
>Q8TBF4:ZCRB1_HUMAN Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Homo sapiens (Human) Length = 217 Score = 48.1 bits (113), Expect = 2e-04 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 V+V LP S T L IFS G++V + IMKD++ SKG F+ F +++ A R Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRAI 71 Query: 286 NGVELQGKRLAVDLSLD 336 N +L G+ + +++D Sbjct: 72 NNKQLFGRVIKASIAID 88
>Q56JZ7:ZCRB1_BOVIN Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Bos taurus (Bovine) Length = 217 Score = 47.8 bits (112), Expect = 2e-04 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAKRQK 285 V+V LP S T L IFS G++V + IMKD++ SKG F+ F +++ A R Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNCTRAI 71 Query: 286 NGVELQGKRLAVDLSLD 336 N +L G+ + +++D Sbjct: 72 NNKQLFGRVIKASIAID 88
>P40561:SGN1_YEAST RNA-binding protein SGN1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 250 Score = 47.8 bits (112), Expect = 2e-04 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 4/90 (4%) Frame = +1 Query: 64 HGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFV 240 H E D R +FVG + T + + F CG+I + ++ D+N G KG+G++ Sbjct: 55 HAHQLEADSR----SIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYI 110 Query: 241 RF---AERECAYIAKRQKNGVELQGKRLAV 321 F A RE A Q NG EL+GK++AV Sbjct: 111 EFESPAYREKAL----QLNGGELKGKKIAV 136
>Q5REG1:SART3_PONPY Squamous cell carcinoma antigen recognized by T-cells 3 - Pongo| pygmaeus (Orangutan) Length = 981 Score = 47.8 bits (112), Expect = 2e-04 Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 21/165 (12%) Frame = +1 Query: 109 VFVGGLPRSATE--GTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQ 282 VFV LP S E LR +F CGE+V +R + G +G+ +V F E + A + + Sbjct: 724 VFVSNLPYSMQEPDAKLRPLFEACGEVVQIRPIFSNRGDFRGYRYVEFKEEKSA-LQALE 782 Query: 283 KNGVELQGKRLAV-----------------DLSLDQDTLFFGNLCKEWSAEEFEEL--IH 405 + ++G+ + V SL++ LF L + EE EE+ H Sbjct: 783 MDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSLEKHKLFISGLPFSCTKEELEEICKAH 842 Query: 406 KTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 T KD+ V T++ +G A+V + + A++ + Sbjct: 843 GTVKDLRLV-----------TNRAGKPKGLAYVEYENESQASQAV 876 Score = 42.0 bits (97), Expect = 0.013 Identities = 22/75 (29%), Positives = 40/75 (53%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQK 285 ++F+ GLP S T+ L EI G + DLR++ ++ G KG +V + A A + Sbjct: 820 KLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKM 879 Query: 286 NGVELQGKRLAVDLS 330 +G+ ++ + V +S Sbjct: 880 DGMTIKENVIKVAIS 894
>Q5RBD3:RBMS3_PONPY RNA-binding motif, single-stranded-interacting protein 3 - Pongo| pygmaeus (Orangutan) Length = 436 Score = 47.8 bits (112), Expect = 2e-04 Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 3/157 (1%) Frame = +1 Query: 55 AASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGF 231 ++++ + ++ +++ GLP T+ L ++ G+IV + + D+N KG+ Sbjct: 44 SSNNSSNNSSGEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGY 103 Query: 232 GFVRFAERECAY--IAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIH 405 GFV F A +A + NGV+ Q +A D L+ NL +E E ++ Sbjct: 104 GFVDFDSPAAAQKAVASLKANGVQAQ---MAKQQEQDPTNLYISNLPISMDEQELENML- 159 Query: 406 KTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSS 516 K F VIS + N ++RG F R S Sbjct: 160 KPFGHVISTRILRDAN--------GVSRGVGFARMES 188 Score = 44.3 bits (103), Expect = 0.003 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +++ LP S E L + G ++ RI++D NGVS+G GF R E + + N Sbjct: 141 LYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEVVIQHFN 200 Query: 289 GVELQ 303 G L+ Sbjct: 201 GKYLK 205 Score = 33.1 bits (74), Expect = 6.0 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 3/133 (2%) Frame = +1 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADE 633 LD +T++ + G+ FV F S AA + + G+ E++ Sbjct: 93 LDKNTNQCK---GYGFVDFDSPAAAQKAV-----ASLKANGVQAQMAKQQEQDPT----- 139 Query: 634 MAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDN 804 ++ NLP + +E L+ + FG VI + R VGF S + + Sbjct: 140 -----NLYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEV 194 Query: 805 AIKEMDGKTVSGP 843 I+ +GK + P Sbjct: 195 VIQHFNGKYLKTP 207
>Q6XE24:RBMS3_HUMAN RNA-binding motif, single-stranded-interacting protein 3 - Homo| sapiens (Human) Length = 437 Score = 47.8 bits (112), Expect = 2e-04 Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 3/157 (1%) Frame = +1 Query: 55 AASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGF 231 ++++ + ++ +++ GLP T+ L ++ G+IV + + D+N KG+ Sbjct: 45 SSNNSSNNSSGEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGY 104 Query: 232 GFVRFAERECAY--IAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIH 405 GFV F A +A + NGV+ Q +A D L+ NL +E E ++ Sbjct: 105 GFVDFDSPAAAQKAVASLKANGVQAQ---MAKQQEQDPTNLYISNLPISMDEQELENML- 160 Query: 406 KTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSS 516 K F VIS + N ++RG F R S Sbjct: 161 KPFGHVISTRILRDAN--------GVSRGVGFARMES 189 Score = 44.3 bits (103), Expect = 0.003 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +++ LP S E L + G ++ RI++D NGVS+G GF R E + + N Sbjct: 142 LYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEVVIQHFN 201 Query: 289 GVELQ 303 G L+ Sbjct: 202 GKYLK 206 Score = 33.1 bits (74), Expect = 6.0 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 3/133 (2%) Frame = +1 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADE 633 LD +T++ + G+ FV F S AA + + G+ E++ Sbjct: 94 LDKNTNQCK---GYGFVDFDSPAAAQKAV-----ASLKANGVQAQMAKQQEQDPT----- 140 Query: 634 MAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDN 804 ++ NLP + +E L+ + FG VI + R VGF S + + Sbjct: 141 -----NLYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEV 195 Query: 805 AIKEMDGKTVSGP 843 I+ +GK + P Sbjct: 196 VIQHFNGKYLKTP 208
>Q3MHY8:RBM7_BOVIN RNA-binding protein 7 - Bos taurus (Bovine)| Length = 262 Score = 47.8 bits (112), Expect = 2e-04 Identities = 24/71 (33%), Positives = 37/71 (52%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +FVG L TE L E+F G ++ ++I KD++G K F FV F A N Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLN 71 Query: 289 GVELQGKRLAV 321 G++L G+ + + Sbjct: 72 GIKLFGRPIKI 82
>Q9Y4C8:RBM19_HUMAN Probable RNA-binding protein 19 - Homo sapiens (Human)| Length = 960 Score = 47.8 bits (112), Expect = 2e-04 Identities = 60/239 (25%), Positives = 91/239 (38%), Gaps = 10/239 (4%) Frame = +1 Query: 67 GDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVR 243 G+ +E++ + +FV LP ++TE L ++FS G + +L D KGF F+ Sbjct: 390 GENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFIT 449 Query: 244 FAERECAYIAKRQKNGVELQGKRLAV-------DLSLDQDTLFFGNLCKEWSAEEFEELI 402 F E A A + +G QG+ L V + S D L + K+ A++ Sbjct: 450 FMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASEDASALGSSSYKKKKEAQDKANSA 509 Query: 403 HKTFKDVISVDLAMAPN--LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGG 576 + L M PN D+ K + F + A RV T + Sbjct: 510 SSHNWNT----LFMGPNAVADAIAQKYNATKSQVFDHETKGSVAVRVAL--GETQLVQEV 563 Query: 577 ILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKG 753 N +S A V NLPA L++ FGRFG + RV + G Sbjct: 564 RRFLIDNGVSLDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGG 622 Score = 45.4 bits (106), Expect = 0.001 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 6/138 (4%) Frame = +1 Query: 88 RRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVS--KGFGFVRFAEREC 261 R+ +++ V +P A +RE+FST GE+ +R+ K G +GFGFV F ++ Sbjct: 827 RKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQ- 885 Query: 262 AYIAKRQKNGV----ELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVIS 429 AKR N + L G+RL ++ + + TL + +A F E K V+ Sbjct: 886 --DAKRAFNALCHSTHLYGRRLVLEWADSEVTL---QALRRKTAAHFHEPPKKKRSVVLD 940 Query: 430 VDLAMAPNLDSSTSKRRL 483 L DS + ++ L Sbjct: 941 EILEQLEGSDSDSEEQTL 958 Score = 35.8 bits (81), Expect = 0.93 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Frame = +1 Query: 616 NVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEV--IRVAVSRKGQYPVG--FIHFG 783 N + +++A+ FV NLP + E+ L+KLF ++G + + + + P G FI F Sbjct: 392 NEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFM 451 Query: 784 SRSELDNAIKEMDGKTVSG 840 A E+DG+ G Sbjct: 452 FPEHAVKAYSEVDGQVFQG 470
>Q4R813:HNRGT_MACFA Testis-specific heterogeneous nuclear ribonucleoprotein G-T -| Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 394 Score = 47.8 bits (112), Expect = 2e-04 Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++F+GGL E L F G IV++ +MKD + S+GF FV F A A R Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARD 68 Query: 283 KNGVELQGKRLAV 321 NG L GK + V Sbjct: 69 MNGKSLDGKAIKV 81 Score = 40.8 bits (94), Expect = 0.029 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 10/135 (7%) Frame = +1 Query: 619 VDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ----YPVGFIHFGS 786 V+AD K+ F+G L +E L+ FG++G ++ V + + + F+ F S Sbjct: 2 VEADRPGKL---FIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFES 58 Query: 787 RSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNK-----RSREEVK-TRRSNV 948 + A ++M+GK++ G + K+ +PA E+ + RSR + R + Sbjct: 59 PANAKAAARDMNGKSLD----GKAIKV-AQATKPAFESSRRGPPPPRSRGRPRFLRGTRG 113 Query: 949 SGGKPDYSHGRYGHD 993 GG P S R G D Sbjct: 114 GGGGPRRSPSRGGPD 128
>O75526:HNRGT_HUMAN Testis-specific heterogeneous nuclear ribonucleoprotein G-T - Homo| sapiens (Human) Length = 392 Score = 47.8 bits (112), Expect = 2e-04 Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQ 282 ++F+GGL E L F G IV++ +MKD + S+GF FV F A A R Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARD 68 Query: 283 KNGVELQGKRLAV 321 NG L GK + V Sbjct: 69 MNGKSLDGKAIKV 81 Score = 41.6 bits (96), Expect = 0.017 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 10/135 (7%) Frame = +1 Query: 619 VDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKGQ----YPVGFIHFGS 786 V+AD K+ F+G L +E L+ FG++G ++ V + + + F+ F S Sbjct: 2 VEADRPGKL---FIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFES 58 Query: 787 RSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARPAVENDNK-----RSREEVK-TRRSNV 948 ++ A ++M+GK++ G + K+ +PA E+ + RSR + R + Sbjct: 59 PADAKAAARDMNGKSLD----GKAIKV-AQATKPAFESSRRGPPPPRSRGRPRFLRGTRG 113 Query: 949 SGGKPDYSHGRYGHD 993 GG P S R G D Sbjct: 114 GGGGPRRSPSRGGPD 128
>Q6NU14:HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-like-B - Xenopus laevis| (African clawed frog) Length = 291 Score = 47.8 bits (112), Expect = 2e-04 Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 6/152 (3%) Frame = +1 Query: 103 AEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAER----ECAY 267 +++F+GGL ++ L E S GE++D I D G S+GFGFV F + + Sbjct: 34 SKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLE 93 Query: 268 IAKRQKNGVELQGKRL-AVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAM 444 + + +G + KR A+ +F G L E + E+ ++ F ++ +++L M Sbjct: 94 TKEHKLDGKLIDPKRAKALQGKEPPKKVFVGGLSPETTEEQIKQYF-GGFGEIENIELPM 152 Query: 445 APNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 D+ T++R RGF FV ++ ++L Sbjct: 153 ----DTKTNER---RGFCFVTYTDEEPVQKLL 177 Score = 38.1 bits (87), Expect = 0.19 Identities = 35/135 (25%), Positives = 58/135 (42%) Frame = +1 Query: 322 DLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAF 501 D L + +F G L + S ++ E + + F +V+ + P S RGF F Sbjct: 28 DFFLIRSKMFIGGLSWDTSKKDLTEYLSR-FGEVLDCTIKTDPVTGRS-------RGFGF 79 Query: 502 VRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANA 681 V F + +VL ++ + G ++ P +R + E K FVG L Sbjct: 80 VLFKDAVSVDKVLE--TKEHKLDGKLIDP-----KRAKALQGKEPPK--KVFVGGLSPET 130 Query: 682 NEDYLKKLFGRFGEV 726 E+ +K+ FG FGE+ Sbjct: 131 TEEQIKQYFGGFGEI 145
>P25555:GBP2_YEAST Single-strand telomeric DNA-binding protein GBP2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 427 Score = 47.8 bits (112), Expect = 2e-04 Identities = 26/74 (35%), Positives = 41/74 (55%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKR 279 G EVF+ LP S +L+++F CG ++ + D NG S+GFG V + + A Sbjct: 218 GFEVFIINLPYSMNWQSLKDMFKECGHVLRADVELDFNGFSRGFGSVIYPTEDEMIRAID 277 Query: 280 QKNGVELQGKRLAV 321 NG+E++G+ L V Sbjct: 278 TFNGMEVEGRVLEV 291 Score = 37.7 bits (86), Expect = 0.25 Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 6/125 (4%) Frame = +1 Query: 571 GGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRV-AVSR 747 G L P + + E DA + + FV NL + + LK+LFG GEV+ ++ Sbjct: 98 GRTLGPIVE-RDLERQFDATKRNFENSIFVRNLTFDCTPEDLKELFGTVGEVVEADIITS 156 Query: 748 KGQY-PVGFIHFGSRSELDNAIKEMDGKTVSGPNRGPSFKIQVSVARP----AVENDNKR 912 KG + +G + F + +AI + DG K+ V P A E K Sbjct: 157 KGHHRGMGTVEFTKNESVQDAISKFDGALFM------DRKLMVRQDNPPPEAAKEFSKKA 210 Query: 913 SREEV 927 +REE+ Sbjct: 211 TREEI 215 Score = 36.2 bits (82), Expect = 0.71 Identities = 22/71 (30%), Positives = 35/71 (49%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +FV L T L+E+F T GE+V+ I+ + G +G G V F + E A + + Sbjct: 124 IFVRNLTFDCTPEDLKELFGTVGEVVEADIITSK-GHHRGMGTVEFTKNESVQDAISKFD 182 Query: 289 GVELQGKRLAV 321 G ++L V Sbjct: 183 GALFMDRKLMV 193
>Q6PF35:CEL1B_XENLA CUG-BP- and ETR-3-like factor 1-B - Xenopus laevis (African clawed| frog) Length = 489 Score = 47.8 bits (112), Expect = 2e-04 Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 13/183 (7%) Frame = +1 Query: 64 HGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSKGFG 234 H D+ + D ++FVG +PRS +E LRE+F G + ++ +++D++ SKG Sbjct: 7 HPDHPDSD----SIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCC 62 Query: 235 FVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEWSAE 384 F+ F R+ A A+ + ++ L G + + +++ LF G + K+ + Sbjct: 63 FITFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMVSKKCNEN 122 Query: 385 EFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDF 564 + L + F + + P+ ++RG AF+ F++ A ++ + Sbjct: 123 DIRTLFSQ-FGQIEESRILRGPD--------GMSRGCAFITFTTRSMAQMAIKAMHQAQT 173 Query: 565 MLG 573 M G Sbjct: 174 MEG 176 Score = 43.9 bits (102), Expect = 0.003 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +1 Query: 67 GDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVR 243 G Q +GA +F+ LP+ + L ++F G IV ++ D Q +SK FGF+ Sbjct: 392 GAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQTNLSKCFGFIS 451 Query: 244 FAERECAYIAKRQKNGVELQGKRLAVDL 327 + A A + NG ++ KRL V L Sbjct: 452 YDNPVSAQAAIQSMNGFQIGMKRLKVQL 479 Score = 43.1 bits (100), Expect = 0.006 Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 4/210 (1%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G + + WS +E EL + + V +++ + + SK G F+ F Sbjct: 14 DSIKMFVGQVPRSWSEKELRELFEQ-YGAVYEINVLRDRSQNPPQSK-----GCCFITFY 67 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + AA +L G+ HP + ++ + + + R F+G + NE+ Sbjct: 68 TRKAALEAQNALHNMK-VLPGMHHPI---QMKPADSEKNNAVEDRKLFIGMVSKKCNEND 123 Query: 694 LKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEM-DGKTVSGPNRGPSF 861 ++ LF +FG++ + R FI F +RS AIK M +T+ G S Sbjct: 124 IRTLFSQFGQIEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQTM----EGCSS 179 Query: 862 KIQVSVARPAVENDNKRSREEVKTRRSNVS 951 I V A + + KR ++++ + ++ Sbjct: 180 PIVVKFADTQKDKEQKRMTQQLQQQMQQLN 209
>Q8BWL5:RBMS3_MOUSE RNA-binding motif, single-stranded-interacting protein 3 - Mus| musculus (Mouse) Length = 431 Score = 47.4 bits (111), Expect = 3e-04 Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 3/156 (1%) Frame = +1 Query: 58 ASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFG 234 +++ + ++ +++ GLP T+ L ++ G+IV + + D+N KG+G Sbjct: 41 STNSSSNSSGEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYG 100 Query: 235 FVRFAERECAY--IAKRQKNGVELQGKRLAVDLSLDQDTLFFGNLCKEWSAEEFEELIHK 408 FV F A +A + NGV+ Q +A D L+ NL +E E ++ K Sbjct: 101 FVDFDSPAAAQKAVASLKANGVQAQ---MAKQQEQDPTNLYISNLPISMDEQELENML-K 156 Query: 409 TFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSS 516 F VIS + N ++RG F R S Sbjct: 157 PFGHVISTRILRDAN--------GVSRGVGFARMES 184 Score = 44.3 bits (103), Expect = 0.003 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +++ LP S E L + G ++ RI++D NGVS+G GF R E + + N Sbjct: 137 LYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEVVIQHFN 196 Query: 289 GVELQ 303 G L+ Sbjct: 197 GKYLK 201 Score = 33.1 bits (74), Expect = 6.0 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 3/133 (2%) Frame = +1 Query: 454 LDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADE 633 LD +T++ + G+ FV F S AA + + G+ E++ Sbjct: 89 LDKNTNQCK---GYGFVDFDSPAAAQKAV-----ASLKANGVQAQMAKQQEQDPT----- 135 Query: 634 MAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDN 804 ++ NLP + +E L+ + FG VI + R VGF S + + Sbjct: 136 -----NLYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEV 190 Query: 805 AIKEMDGKTVSGP 843 I+ +GK + P Sbjct: 191 VIQHFNGKYLKTP 203
>Q9CQT2:RBM7_MOUSE RNA-binding protein 7 - Mus musculus (Mouse)| Length = 265 Score = 47.4 bits (111), Expect = 3e-04 Identities = 24/71 (33%), Positives = 37/71 (52%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 +FVG L TE L E+F G ++ ++I KD++G K F FV F A N Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKLKQFAFVNFKHEVSVPYAMNLLN 71 Query: 289 GVELQGKRLAV 321 G++L G+ + + Sbjct: 72 GIKLFGRPIKI 82
>O43347:MSI1H_HUMAN RNA-binding protein Musashi homolog 1 - Homo sapiens (Human)| Length = 362 Score = 47.4 bits (111), Expect = 3e-04 Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 11/158 (6%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQ 282 ++F+GGL T+ LRE F GE+ + +M+D S+GFGFV F ++ Q Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 283 KNGVELQGKRLAVDLSLDQ----------DTLFFGNLCKEWSAEEFEELIHKTFKDVISV 432 EL K + ++ + +F G L + E+ + + F+ V Sbjct: 81 SRH-ELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVED----VKQYFEQFGKV 135 Query: 433 DLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI 546 D AM D +T++ +RGF FV F S +V I Sbjct: 136 DDAML-MFDKTTNR---HRGFGFVTFESEDIVEKVCEI 169 Score = 34.3 bits (77), Expect = 2.7 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSR----KGQYPVGFIHFGSRSELDNAI---- 810 F+G L ++ L++ FG+FGEV V R K GF+ F ++ +D + Sbjct: 23 FIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSR 82 Query: 811 KEMDGKTV 834 E+D KT+ Sbjct: 83 HELDSKTI 90
>Q7ZX83:HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-like-A - Xenopus laevis| (African clawed frog) Length = 293 Score = 47.4 bits (111), Expect = 3e-04 Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 8/176 (4%) Frame = +1 Query: 37 PKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-N 213 P + + + ++QD ++F+GGL ++ L E S GE++D I D Sbjct: 8 PDFNEGSKINASKNQQDE----GKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVT 63 Query: 214 GVSKGFGFVRFAERECAYIAK-RQKNGVELQGKRL------AVDLSLDQDTLFFGNLCKE 372 G S+GFGFV F ++ + K + N +L GK + A+ +F G L E Sbjct: 64 GRSRGFGFVLF--KDAVSVDKVLETNEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPE 121 Query: 373 WSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL 540 + E+ ++ F ++ +++L +D+ T++R RGF FV ++ ++L Sbjct: 122 TTEEQIKQYF-GGFGEIENIELP----IDTKTNER---RGFCFVTYTGEEPVKKLL 169 Score = 38.5 bits (88), Expect = 0.14 Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 2/148 (1%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D+ +F G L + S ++ E + + F +V+ + P S RGF FV F Sbjct: 24 DEGKMFIGGLSWDTSKKDLTEYLSR-FGEVLDCTIKTDPVTGRS-------RGFGFVLFK 75 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + +VL + G ++ P +R + E K FVG L E+ Sbjct: 76 DAVSVDKVLETNEHK--LDGKLIDP-----KRAKALKGKEPPK--KVFVGGLSPETTEEQ 126 Query: 694 LKKLFGRFGEV--IRVAVSRKGQYPVGF 771 +K+ FG FGE+ I + + K GF Sbjct: 127 IKQYFGGFGEIENIELPIDTKTNERRGF 154
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 47.0 bits (110), Expect = 4e-04 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Frame = +1 Query: 100 GAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECAYIAK 276 G V+VG L + L +FS G++V+ R++ D++ G SKGFGFV + + A Sbjct: 203 GNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAI 262 Query: 277 RQKNGVELQGKRLAV 321 + +G +L G+++ V Sbjct: 263 KSLDGADLDGRQIRV 277 Score = 46.2 bits (108), Expect = 7e-04 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQ-NGVSKGFGFVRFAERECAYIAKRQ 282 ++FVG LP + L ++F + G + + ++ D+ G S+GFGFV + A +Q Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151 Query: 283 KNGVELQGKRLAVD 324 NG EL G+ L V+ Sbjct: 152 FNGYELDGRPLRVN 165 Score = 37.7 bits (86), Expect = 0.25 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVI--RVAVSRKG--QYPVGFIHFGSRSELDNAIKEMD 822 +VGNL ++ L+ LF G+V+ RV R GF+ + S E+ NAIK +D Sbjct: 207 YVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLD 266 Query: 823 GKTVSGPNRGPSFKIQVSVARP 888 G + G ++ + ARP Sbjct: 267 GADLD----GRQIRVSEAEARP 284 Score = 32.7 bits (73), Expect = 7.9 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 9/76 (11%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFG-----EVIRVAVSRKGQYPVGFIHFGSRSELDNAIKEM 819 FVGNLP N + L +LF G EVI ++ + + GF+ S SE++ A ++ Sbjct: 94 FVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSR-GFGFVTMSSVSEVEAAAQQF 152 Query: 820 DGKTVSG----PNRGP 855 +G + G N GP Sbjct: 153 NGYELDGRPLRVNAGP 168
>Q9V535:RBM8A_DROME RNA-binding protein 8A - Drosophila melanogaster (Fruit fly)| Length = 165 Score = 47.0 bits (110), Expect = 4e-04 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Frame = +1 Query: 88 RRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN-GVSKGFGFVRFAERECA 264 R V+G +FV + A E ++E F GEI ++ + D+ G SKG+ V + + A Sbjct: 68 RSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQA 127 Query: 265 YIAKRQKNGVELQGKRLAVD 324 AK NG E+ G+ + VD Sbjct: 128 LAAKEALNGAEIMGQTIQVD 147
>P57052:RBM11_HUMAN Putative RNA-binding protein 11 - Homo sapiens (Human)| Length = 281 Score = 47.0 bits (110), Expect = 4e-04 Identities = 27/71 (38%), Positives = 34/71 (47%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQKN 288 VFVG L E L E+F G + + I KD+ G K FGFV F E A N Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLN 71 Query: 289 GVELQGKRLAV 321 G+ L G+ + V Sbjct: 72 GIRLYGRPINV 82
>P13383:NUCL_RAT Nucleolin - Rattus norvegicus (Rat)| Length = 713 Score = 47.0 bits (110), Expect = 4e-04 Identities = 60/272 (22%), Positives = 110/272 (40%), Gaps = 21/272 (7%) Frame = +1 Query: 88 RRVKGAEVFVG-GLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECA 264 ++V+ A + L + TE L+E+F + V++R++ Q+G SKG ++ F A Sbjct: 391 KKVRAARTLLAKNLSFNITEDELKEVFE---DAVEIRLVS-QDGRSKGIAYIEFKSEADA 446 Query: 265 YIAKRQKNGVELQGKRLAV-----------------DLSLDQDTLFFGNLCKEWSAEEFE 393 +K G E+ G+ +++ S + TL NL S E Sbjct: 447 EKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNL----SYSATE 502 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDFMLG 573 E + + F+ + + P+ S +G+AF+ F+S A L ++ + + G Sbjct: 503 ETLQEVFEKATFIKVPQNPHGKS--------KGYAFIEFASFEDAKEALNSCNKME-IEG 553 Query: 574 GILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEV-IRVAVSRK 750 + + N + +T FV L + E+ LK+ F G V R+ R+ Sbjct: 554 RTIRLELQGPRGSPNARSQPS---KTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRE 608 Query: 751 --GQYPVGFIHFGSRSELDNAIKEMDGKTVSG 840 GF+ F S + A + M+ + G Sbjct: 609 TGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDG 640 Score = 45.8 bits (107), Expect = 0.001 Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = +1 Query: 109 VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVRFAERECAYIAKRQK 285 +FV GL TE TL+E F V RI+ D + G SKGFGFV F E A AK Sbjct: 577 LFVKGLSEDTTEETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 633 Query: 286 NGVELQGKRLAVD 324 E+ G ++ +D Sbjct: 634 EDGEIDGNKVTLD 646 Score = 43.9 bits (102), Expect = 0.003 Identities = 61/294 (20%), Positives = 127/294 (43%), Gaps = 27/294 (9%) Frame = +1 Query: 76 DEQDRRVKGAE------VFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGF 237 + + ++++G+E +F+G L + + L+ S DL + + G ++ FG+ Sbjct: 296 EAKKQKIEGSEPTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAAVDVRTGTNRKFGY 355 Query: 238 VRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQD--------TLFFGNLCKEWSAEEFE 393 V F E A + G+++ G + ++ +D TL NL + +E + Sbjct: 356 VDFESAEDLEKA-LELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELK 414 Query: 394 ELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVL--RIGSRTDFM 567 E+ F+D + + L S+ ++G A++ F S A + L + G+ D Sbjct: 415 EV----FEDAVEIRL---------VSQDGRSKGIAYIEFKSEADAEKNLEEKQGAEIDGR 461 Query: 568 LGGILHPAINWTERE-SNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVS 744 + + +E + ++ + +T + NL +A E+ L+++F + I+V + Sbjct: 462 SVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATEETLQEVFEK-ATFIKVPQN 520 Query: 745 RKGQYP-VGFIHFGSRSELDNAIK-----EMDGKTV----SGPNRGPSFKIQVS 876 G+ FI F S + A+ E++G+T+ GP P+ + Q S Sbjct: 521 PHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPRGSPNARSQPS 574
>Q920Q6:MSI2H_MOUSE RNA-binding protein Musashi homolog 2 - Mus musculus (Mouse)| Length = 346 Score = 47.0 bits (110), Expect = 4e-04 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 11/158 (6%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGV-SKGFGFVRFAERECAYIAKRQ 282 ++F+GGL + +LR+ FS GEI + +M+D S+GFGFV FA+ Q Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81 Query: 283 KNGVELQGKRLAVDLSLDQ----------DTLFFGNLCKEWSAEEFEELIHKTFKDVISV 432 + EL K + ++ + +F G L SA E + + F+ V Sbjct: 82 PHH-ELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGL----SANTVVEDVKQYFEQFGKV 136 Query: 433 DLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI 546 + AM D +T++ +RGF FV F + +V I Sbjct: 137 EDAML-MFDKTTNR---HRGFGFVTFENEDVVEKVCEI 170 Score = 35.0 bits (79), Expect = 1.6 Identities = 37/137 (27%), Positives = 58/137 (42%) Frame = +1 Query: 316 AVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGF 495 A D D +F G L + S + + K F ++ + P T+KR +RGF Sbjct: 13 ANDSQHDPGKMFIGGLSWQTSPDSLRDYFSK-FGEIRECMVMRDP-----TTKR--SRGF 64 Query: 496 AFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPA 675 FV F+ + +VL G + + P + + R KI FVG L A Sbjct: 65 GFVTFADPASVDKVL--GQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI---FVGGLSA 119 Query: 676 NANEDYLKKLFGRFGEV 726 N + +K+ F +FG+V Sbjct: 120 NTVVEDVKQYFEQFGKV 136 Score = 33.5 bits (75), Expect = 4.6 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Frame = +1 Query: 586 PAINWTERESNVDADEMAKIRTAFVGNLPANANEDYLKKLFGRFGEVIRVAVSR----KG 753 P + + +S D +M F+G L + D L+ F +FGE+ V R K Sbjct: 7 PGTSGSANDSQHDPGKM------FIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR 60 Query: 754 QYPVGFIHFGSRSELDNAI----KEMDGKTV 834 GF+ F + +D + E+D KT+ Sbjct: 61 SRGFGFVTFADPASVDKVLGQPHHELDSKTI 91
>Q96DH6:MSI2H_HUMAN RNA-binding protein Musashi homolog 2 - Homo sapiens (Human)| Length = 328 Score = 47.0 bits (110), Expect = 4e-04 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 11/158 (6%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGV-SKGFGFVRFAERECAYIAKRQ 282 ++F+GGL + +LR+ FS GEI + +M+D S+GFGFV FA+ Q Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81 Query: 283 KNGVELQGKRLAVDLSLDQ----------DTLFFGNLCKEWSAEEFEELIHKTFKDVISV 432 + EL K + ++ + +F G L SA E + + F+ V Sbjct: 82 PHH-ELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGL----SANTVVEDVKQYFEQFGKV 136 Query: 433 DLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRI 546 + AM D +T++ +RGF FV F + +V I Sbjct: 137 EDAML-MFDKTTNR---HRGFGFVTFENEDVVEKVCEI 170 Score = 35.0 bits (79), Expect = 1.6 Identities = 37/137 (27%), Positives = 58/137 (42%) Frame = +1 Query: 316 AVDLSLDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGF 495 A D D +F G L + S + + K F ++ + P T+KR +RGF Sbjct: 13 ANDSQHDPGKMFIGGLSWQTSPDSLRDYFSK-FGEIRECMVMRDP-----TTKR--SRGF 64 Query: 496 AFVRFSSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPA 675 FV F+ + +VL G + + P + + R KI FVG L A Sbjct: 65 GFVTFADPASVDKVL--GQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI---FVGGLSA 119 Query: 676 NANEDYLKKLFGRFGEV 726 N + +K+ F +FG+V Sbjct: 120 NTVVEDVKQYFEQFGKV 136 Score = 33.1 bits (74), Expect = 6.0 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 8/68 (11%) Frame = +1 Query: 655 FVGNLPANANEDYLKKLFGRFGEVIRVAVSR----KGQYPVGFIHFGSRSELDNAI---- 810 F+G L + D L+ F +FGE+ V R K GF+ F + +D + Sbjct: 24 FIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPH 83 Query: 811 KEMDGKTV 834 E+D KT+ Sbjct: 84 HELDSKTI 91
>P41891:GAR2_SCHPO Protein gar2 - Schizosaccharomyces pombe (Fission yeast)| Length = 500 Score = 47.0 bits (110), Expect = 4e-04 Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 27/201 (13%) Frame = +1 Query: 25 RREEPKMDRRAASHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMK 204 R+ EP + R A + VFVG L + + L + F G IV R++ Sbjct: 239 RKAEPASEERPAKITKPSQDSNET--CTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIM 296 Query: 205 D-QNGVSKGFGFVRFAERECAYIAKRQKNGVELQGKRLAVDLSLDQ-------------- 339 D Q+G SKG+G+V F E A A E+ G+ + +DLS + Sbjct: 297 DGQSGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGN 356 Query: 340 ---------DTLFFGNLCKEWSAEEFEELIHKTF---KDVISVDLAMAPNLDSSTSKRRL 483 DT+F GNL S E+ + F D+ S+ L P RL Sbjct: 357 FGDQLSEPSDTVFVGNL----SFNATEDDLSTAFGGCGDIQSIRLPTDP------QSGRL 406 Query: 484 NRGFAFVRFSSHGAAARVLRI 546 +GF +V FS +A + + + Sbjct: 407 -KGFGYVTFSDIDSAKKCVEM 426
>Q5R995:CELF1_PONPY CUG-BP- and ETR-3-like factor 1 - Pongo pygmaeus (Orangutan)| Length = 513 Score = 47.0 bits (110), Expect = 4e-04 Identities = 43/207 (20%), Positives = 93/207 (44%), Gaps = 14/207 (6%) Frame = +1 Query: 64 HGDYDEQDRR-VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSKGF 231 +G D D+ + ++FVG +PR+ +E LRE+F G + ++ +++D++ SKG Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 88 Query: 232 GFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEWSA 381 FV F R+ A A+ + ++ L G + + +++ LF G + K+ + Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTE 148 Query: 382 EEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTD 561 + ++ +F + + P+ L+RG A V F++ A ++ + Sbjct: 149 NDI-RVMFSSFGQIEECRILWGPD--------GLSRGCALVTFTTRAMAQTAIKAMHQAQ 199 Query: 562 FMLGGILHPAINWTERESNVDADEMAK 642 M G + + + + + + MA+ Sbjct: 200 TMEGCSSPMVVKFADTQKDKEQKRMAQ 226 Score = 44.3 bits (103), Expect = 0.003 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = +1 Query: 61 SHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGF 237 S G Q +GA +F+ LP+ + L ++F G +V ++ D Q +SK FGF Sbjct: 414 SIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGF 473 Query: 238 VRFAERECAYIAKRQKNGVELQGKRLAVDL 327 V + A A + NG ++ KRL V L Sbjct: 474 VSYDNPVSAQAAIQSMNGFQIGMKRLKVQL 503 Score = 36.6 bits (83), Expect = 0.55 Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 4/211 (1%) Frame = +1 Query: 331 LDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRF 510 LD +F G + + WS ++ EL + + V +++ + + SK G FV F Sbjct: 40 LDAIKMFVGQVPRTWSEKDLRELFEQ-YGAVYEINVLRDRSQNPPQSK-----GCCFVTF 93 Query: 511 SSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANED 690 + AA +L G+ HP + ++ + + + R F+G + E+ Sbjct: 94 YTRKAALEAQNALHNMK-VLPGMHHPI---QMKPADSEKNNAVEDRKLFIGMISKKCTEN 149 Query: 691 YLKKLFGRFGEV--IRVAVSRKG-QYPVGFIHFGSRSELDNAIKEM-DGKTVSGPNRGPS 858 ++ +F FG++ R+ G + F +R+ AIK M +T+ G S Sbjct: 150 DIRVMFSSFGQIEECRILWGPDGLSRGCALVTFTTRAMAQTAIKAMHQAQTM----EGCS 205 Query: 859 FKIQVSVARPAVENDNKRSREEVKTRRSNVS 951 + V A + + KR ++++ + +S Sbjct: 206 SPMVVKFADTQKDKEQKRMAQQLQQQMQQIS 236
>Q5F3T7:CELF1_CHICK CUG-BP- and ETR-3-like factor 1 - Gallus gallus (Chicken)| Length = 489 Score = 47.0 bits (110), Expect = 4e-04 Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 14/184 (7%) Frame = +1 Query: 64 HGDYDEQDRR-VKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSKGF 231 +G D D+ + ++FVG +PRS E LRE+F G + ++ +++D++ SKG Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61 Query: 232 GFVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEWSA 381 FV F R+ A A+ + ++ L G + + +++ LF G + K+ + Sbjct: 62 CFVTFYTRKAALEAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNE 121 Query: 382 EEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTD 561 + ++ F + + P+ L+RG AFV F++ A ++ + Sbjct: 122 NDI-RVMFSPFGQIEECRILRGPD--------GLSRGCAFVTFTTRAMAQTAIKAMHQAQ 172 Query: 562 FMLG 573 M G Sbjct: 173 TMEG 176 Score = 44.3 bits (103), Expect = 0.003 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = +1 Query: 61 SHGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGF 237 S G Q +GA +F+ LP+ + L ++F G +V ++ D Q +SK FGF Sbjct: 390 SIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGF 449 Query: 238 VRFAERECAYIAKRQKNGVELQGKRLAVDL 327 V + A A + NG ++ KRL V L Sbjct: 450 VSYDNPVSAQAAIQSMNGFQIGMKRLKVQL 479 Score = 40.8 bits (94), Expect = 0.029 Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 4/211 (1%) Frame = +1 Query: 331 LDQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRF 510 LD +F G + + W ++ EL + + V +++ + + SK G FV F Sbjct: 13 LDAIKMFVGQVPRSWCEKDLRELFEQ-YGAVYEINVLRDRSQNPPQSK-----GCCFVTF 66 Query: 511 SSHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANED 690 + AA +L G+ HP + ++ + + + R F+G + NE+ Sbjct: 67 YTRKAALEAQNALHNMK-ILPGMHHPI---QMKPADSEKNNAVEDRKLFIGMISKKCNEN 122 Query: 691 YLKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEM-DGKTVSGPNRGPS 858 ++ +F FG++ + R F+ F +R+ AIK M +T+ G S Sbjct: 123 DIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTM----EGCS 178 Query: 859 FKIQVSVARPAVENDNKRSREEVKTRRSNVS 951 I V A + + KR ++++ + +S Sbjct: 179 SPIVVKFADTQKDKEQKRIAQQLQQQMQQIS 209
>O57406:CEL1A_XENLA CUG-BP- and ETR-3-like factor 1-A - Xenopus laevis (African clawed| frog) Length = 489 Score = 47.0 bits (110), Expect = 4e-04 Identities = 21/65 (32%), Positives = 40/65 (61%) Frame = +1 Query: 79 EQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERE 258 E++ V+ ++F+G + ++ E +R +FS G+I + RI++ +G+S+G FV F R Sbjct: 100 EKNNAVEDRKLFIGMVSKNCNENDIRAMFSPFGQIEECRILRGPDGMSRGCAFVTFTTRS 159 Query: 259 CAYIA 273 A +A Sbjct: 160 MAQMA 164 Score = 46.2 bits (108), Expect = 7e-04 Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 13/183 (7%) Frame = +1 Query: 64 HGDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQN---GVSKGFG 234 H D+ + D ++FVG +PRS +E LRE+F G + ++ +++D++ SKG Sbjct: 7 HPDHPDPD----SIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCC 62 Query: 235 FVRFAERECAYIAKRQKNGVE-LQGKRLAVDL---------SLDQDTLFFGNLCKEWSAE 384 F+ F R+ A A+ + ++ L G + + +++ LF G + K + Sbjct: 63 FITFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMVSKNCNEN 122 Query: 385 EFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFSSHGAAARVLRIGSRTDF 564 + + F + + P+ ++RG AFV F++ A ++ + Sbjct: 123 DIRAMF-SPFGQIEECRILRGPD--------GMSRGCAFVTFTTRSMAQMAIKSMHQAQT 173 Query: 565 MLG 573 M G Sbjct: 174 MEG 176 Score = 43.9 bits (102), Expect = 0.003 Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 4/210 (1%) Frame = +1 Query: 334 DQDTLFFGNLCKEWSAEEFEELIHKTFKDVISVDLAMAPNLDSSTSKRRLNRGFAFVRFS 513 D +F G + + WS +E EL + + V +++ + + SK G F+ F Sbjct: 14 DSIKMFVGQVPRSWSEKELRELFEQ-YGAVYEINVLRDRSQNPPQSK-----GCCFITFY 67 Query: 514 SHGAAARVLRIGSRTDFMLGGILHPAINWTERESNVDADEMAKIRTAFVGNLPANANEDY 693 + AA +L G+ HP + ++ + + + R F+G + N NE+ Sbjct: 68 TRKAALEAQNALHNMK-VLPGMHHPI---QMKPADSEKNNAVEDRKLFIGMVSKNCNEND 123 Query: 694 LKKLFGRFGEVIRVAVSRKG---QYPVGFIHFGSRSELDNAIKEM-DGKTVSGPNRGPSF 861 ++ +F FG++ + R F+ F +RS AIK M +T+ G S Sbjct: 124 IRAMFSPFGQIEECRILRGPDGMSRGCAFVTFTTRSMAQMAIKSMHQAQTM----EGCSS 179 Query: 862 KIQVSVARPAVENDNKRSREEVKTRRSNVS 951 I V A + + KR ++++ + ++ Sbjct: 180 PIVVKFADTQKDKEQKRMTQQLQQQMQQLN 209 Score = 43.5 bits (101), Expect = 0.004 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +1 Query: 67 GDYDEQDRRVKGAEVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKD-QNGVSKGFGFVR 243 G Q +GA +F+ LP+ + L ++F G +V ++ D Q +SK FGFV Sbjct: 392 GAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSSKVFIDKQTNLSKCFGFVS 451 Query: 244 FAERECAYIAKRQKNGVELQGKRLAVDL 327 + A A + NG ++ KRL V L Sbjct: 452 YDNPVSAQAAIQSMNGFQIGMKRLKVQL 479
>P90727:U2AF2_CAEBR Splicing factor U2AF 65 kDa subunit - Caenorhabditis briggsae| Length = 488 Score = 46.6 bits (109), Expect = 5e-04 Identities = 24/80 (30%), Positives = 40/80 (50%) Frame = +1 Query: 106 EVFVGGLPRSATEGTLREIFSTCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYIAKRQK 285 ++F+GGLP TE ++E+ + G + + D G SKG+ F + + A Sbjct: 283 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGL 342 Query: 286 NGVELQGKRLAVDLSLDQDT 345 NG++L K+L V L+ T Sbjct: 343 NGMQLGDKQLVVQLACANQT 362 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 456,842,222 Number of extensions: 10306205 Number of successful extensions: 27106 Number of sequences better than 10.0: 561 Number of HSP's gapped: 26531 Number of HSP's successfully gapped: 1071 Length of query: 873 Length of database: 100,686,439 Length adjustment: 122 Effective length of query: 751 Effective length of database: 67,222,449 Effective search space: 50484059199 Effective search space used: 50484059199 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
