ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf92m09 |
|---|---|
| Clone Library Name | barley_pub |
>Os08g0444500:Os08g0444500 | Length = 93 Score = 85.9 bits (211), Expect = 2e-17 Identities = 52/93 (55%), Positives = 59/93 (63%), Gaps = 15/93 (16%) Frame = +1 Query: 79 MRRKATFTVGKAKGV-----VASLMHRRPFQHMVLRRLRELKKIVPDAR----------D 213 M RK+ VG++ G + SL RRPFQ MVLRRLRELKKIVP Sbjct: 1 MTRKSMVAVGRSNGRSSGGGMVSLRRRRPFQLMVLRRLRELKKIVPATSRRSSGGRGGGG 60 Query: 214 ADVDVLLRQTAEYICILELKVAALRRLSAIYGA 312 ADVD LL + AEYIC LE+KVA LR+LSAIYGA Sbjct: 61 ADVDALLHRAAEYICALEVKVAVLRKLSAIYGA 93
>Os08g0414500:Os08g0414500 | Length = 85 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/46 (45%), Positives = 31/46 (67%) Frame = +1 Query: 169 RRLRELKKIVPDARDADVDVLLRQTAEYICILELKVAALRRLSAIY 306 R++REL+++VP A LL +TA+YI L+ +V LR LSA+Y Sbjct: 31 RKVRELRRLVPGGEGAPARSLLVRTADYIVRLKARVELLRALSALY 76
>AK058439:Os06g0653200 | Length = 193 Score = 34.3 bits (77), Expect = 0.076 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +1 Query: 163 VLRRLRELKKIVPDARDA-DVDVLLRQTAEYICILELKVAALRRLS 297 V RR L+K++P DA D LLR+ +Y+ L +V LRR+S Sbjct: 111 VRRRAMALRKVIPGGGDAMDEAALLREAMDYVVHLRAQVDVLRRVS 156
>AK103709:Os03g0311600 | Length = 205 Score = 33.9 bits (76), Expect = 0.099 Identities = 18/64 (28%), Positives = 31/64 (48%) Frame = +1 Query: 169 RRLRELKKIVPDARDADVDVLLRQTAEYICILELKVAALRRLSAIYGA*WDAAPPSRSGP 348 R+ + L ++VP R LL + ++YI LE++V A+ L+ + + S SG Sbjct: 141 RKAKVLGRLVPGCRKLPFPALLAEASDYIAALEMQVRAMTALAEVLSTVSGSGSASSSGG 200 Query: 349 PQRP 360 P Sbjct: 201 SSSP 204
>Os07g0588400:Os07g0588400 | Length = 279 Score = 33.1 bits (74), Expect = 0.17 Identities = 13/50 (26%), Positives = 28/50 (56%) Frame = +1 Query: 136 MHRRPFQHMVLRRLRELKKIVPDARDADVDVLLRQTAEYICILELKVAAL 285 ++ R + + RLR L+ +VP+ D+ +L + +Y+ L+L++ L Sbjct: 200 LYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 249
>AK106119:Os01g0707500 | Length = 393 Score = 31.6 bits (70), Expect = 0.49 Identities = 27/85 (31%), Positives = 37/85 (43%) Frame = +1 Query: 40 NLGRERGRDTQREMRRKATFTVGKAKGVVASLMHRRPFQHMVLRRLRELKKIVPDARDAD 219 +LG E D + RRK + V A L R V RLR L+K+VP D Sbjct: 264 HLGTEAAAD---KPRRKNVRISSDPQTVAARLRRER-----VSDRLRVLQKLVPGGNKMD 315 Query: 220 VDVLLRQTAEYICILELKVAALRRL 294 +L + A Y+ L+ +V L L Sbjct: 316 TASMLDEAASYLKFLKSQVQKLETL 340
>AK100208:Os01g0707500 | Length = 393 Score = 31.6 bits (70), Expect = 0.49 Identities = 27/85 (31%), Positives = 37/85 (43%) Frame = +1 Query: 40 NLGRERGRDTQREMRRKATFTVGKAKGVVASLMHRRPFQHMVLRRLRELKKIVPDARDAD 219 +LG E D + RRK + V A L R V RLR L+K+VP D Sbjct: 264 HLGTEAAAD---KPRRKNVRISSDPQTVAARLRRER-----VSDRLRVLQKLVPGGNKMD 315 Query: 220 VDVLLRQTAEYICILELKVAALRRL 294 +L + A Y+ L+ +V L L Sbjct: 316 TASMLDEAASYLKFLKSQVQKLETL 340
>Os08g0260400:Os08g0260400 | Length = 192 Score = 30.8 bits (68), Expect = 0.84 Identities = 21/71 (29%), Positives = 35/71 (49%) Frame = +1 Query: 82 RRKATFTVGKAKGVVASLMHRRPFQHMVLRRLRELKKIVPDARDADVDVLLRQTAEYICI 261 R++ + + A G +L RR MV RLR L+++VP LL +T +Y+ Sbjct: 113 RKRRSLAMAAASGGGGALAARR----MVKGRLRLLRRLVPGGEALRGFSLLSETLDYVVC 168 Query: 262 LELKVAALRRL 294 L+ +V + L Sbjct: 169 LKTQVELMHSL 179
>AK070458:Os09g0455300 | Length = 236 Score = 30.8 bits (68), Expect = 0.84 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = +1 Query: 163 VLRRLRELKKIVPDARDADVDVLLRQTAEYICILELKVAALRRLSAIYGA 312 + R+R L+++VP D +L + Y+ L+ +V +L R +A GA Sbjct: 163 ISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAAAATGA 212
>AK060477:Os09g0455300 | Length = 236 Score = 30.8 bits (68), Expect = 0.84 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = +1 Query: 163 VLRRLRELKKIVPDARDADVDVLLRQTAEYICILELKVAALRRLSAIYGA 312 + R+R L+++VP D +L + Y+ L+ +V +L R +A GA Sbjct: 163 ISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAAAATGA 212
>Os01g0566800:Os01g0566800 | Length = 484 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/79 (25%), Positives = 34/79 (43%) Frame = +1 Query: 58 GRDTQREMRRKATFTVGKAKGVVASLMHRRPFQHMVLRRLRELKKIVPDARDADVDVLLR 237 G + E R+ + VA+ R + RLR L+K+VP D +L Sbjct: 355 GAEDAGERPRRRNVRISSDPQTVAARQRRE----RISERLRVLQKLVPGGAKMDTASMLD 410 Query: 238 QTAEYICILELKVAALRRL 294 + A Y+ L+ ++ L+ L Sbjct: 411 EAANYLRFLKSQIRELQTL 429
>AK109915:Os11g0523700 | Length = 334 Score = 29.6 bits (65), Expect = 1.9 Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 6/116 (5%) Frame = +1 Query: 58 GRDTQREMRRKATFTV-----GKAKGVVA-SLMHRRPFQHMVLRRLRELKKIVPDARDAD 219 G D+ + A TV GK KG+ A +LM R + + RL L+ +VP D Sbjct: 117 GEDSGAKKESNANSTVTGDGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMD 176 Query: 220 VDVLLRQTAEYICILELKVAALRRLSAIYGA*WDAAPPSRSGPPQRPWLEVLSPRV 387 +L EY+ L K+ L+ A P S P P L L R+ Sbjct: 177 RASILGDAIEYLKELLQKINDLQNELESSPATSSLPPTPTSFHPLTPTLPTLPSRI 232
>AK109662:Os02g0710300 | Length = 300 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = +1 Query: 163 VLRRLRELKKIVPDARDADVDVLLRQTAEYICILELKVAAL 285 + RLR L+++VP+ D+ +L + Y+ L+L+V L Sbjct: 221 ISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 261
>AY238991:Os06g0193400 | Length = 478 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +1 Query: 163 VLRRLRELKKIVPDARDADVDVLLRQTAEYICILEL--KVAALRRLSA 300 + R++ L+ +VP++ AD +L + +Y+ L+L KV ++ RL A Sbjct: 338 ISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGA 385
>AK065667:Os06g0193400 | Length = 478 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +1 Query: 163 VLRRLRELKKIVPDARDADVDVLLRQTAEYICILEL--KVAALRRLSA 300 + R++ L+ +VP++ AD +L + +Y+ L+L KV ++ RL A Sbjct: 338 ISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGA 385
>AK062127:Os06g0193400 | Length = 380 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +1 Query: 163 VLRRLRELKKIVPDARDADVDVLLRQTAEYICILEL--KVAALRRLSA 300 + R++ L+ +VP++ AD +L + +Y+ L+L KV ++ RL A Sbjct: 240 ISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGA 287
>AK111704:Os04g0557200 | Length = 563 Score = 28.9 bits (63), Expect = 3.2 Identities = 23/77 (29%), Positives = 30/77 (38%) Frame = +1 Query: 67 TQREMRRKATFTVGKAKGVVASLMHRRPFQHMVLRRLRELKKIVPDARDADVDVLLRQTA 246 T R R T G V++ R M L LK IVP D +L +T Sbjct: 372 TGRGSRAALTQESGIKNHVISERRRREKLNEMFLI----LKSIVPSIHKVDKASILEETI 427 Query: 247 EYICILELKVAALRRLS 297 Y+ +LE +V L S Sbjct: 428 AYLKVLEKRVKELESSS 444
>AK110943:Os02g0178700 | Length = 210 Score = 28.9 bits (63), Expect = 3.2 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Frame = +1 Query: 70 QREMRRKATFTVGKAKGVVASLMHRRPFQHMVLRRLRELKKIVPDAR-DADVDVLLRQTA 246 Q ++RR+ V + +++S + +V +R + L++++P AD LL + Sbjct: 100 QGKVRRRCKSIVRRRTPLMSS--SSEVARRLVKKRDKVLRRMIPGGELIADEISLLHEAM 157 Query: 247 EYICILELKVAALRRLSAIYGA*WDAAPPSRSG 345 +Y+ L +V LRR+S A +A S SG Sbjct: 158 DYVVHLHAQVDVLRRVSRAAVARRSSASSSSSG 190
>AK104412:Os03g0797600 | Length = 294 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = +1 Query: 163 VLRRLRELKKIVPDARDADVDVLLRQTAEYICILELKVAALRRLSAIYGA 312 + R+R L+++VP+ D +L + +Y+ L L+V L +S + GA Sbjct: 155 IAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL-SMSRLGGA 203
>AK068388:Os03g0797600 | Length = 294 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = +1 Query: 163 VLRRLRELKKIVPDARDADVDVLLRQTAEYICILELKVAALRRLSAIYGA 312 + R+R L+++VP+ D +L + +Y+ L L+V L +S + GA Sbjct: 155 IAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL-SMSRLGGA 203
>AK067446:Os03g0797600 | Length = 294 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = +1 Query: 163 VLRRLRELKKIVPDARDADVDVLLRQTAEYICILELKVAALRRLSAIYGA 312 + R+R L+++VP+ D +L + +Y+ L L+V L +S + GA Sbjct: 155 IAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL-SMSRLGGA 203
>Os05g0139100:Os05g0139100 | Length = 505 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/65 (21%), Positives = 33/65 (50%) Frame = +1 Query: 82 RRKATFTVGKAKGVVASLMHRRPFQHMVLRRLRELKKIVPDARDADVDVLLRQTAEYICI 261 RR A + +++ + R + + ++R L++++P+ D +L + EY+ Sbjct: 324 RRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKT 383 Query: 262 LELKV 276 L+L+V Sbjct: 384 LQLQV 388
>AK102252:Os01g0286100 | Length = 731 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/66 (19%), Positives = 34/66 (51%) Frame = +1 Query: 79 MRRKATFTVGKAKGVVASLMHRRPFQHMVLRRLRELKKIVPDARDADVDVLLRQTAEYIC 258 +R+ T + +++ + R + + ++R L++++P+ D +L + EY+ Sbjct: 466 LRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLK 525 Query: 259 ILELKV 276 L+L+V Sbjct: 526 TLQLQV 531
>AK101290:Os03g0304500 | Length = 668 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 276 GRPAEALRHLRRVMGCRASVSVRPTAAPMVRG 371 G PAEA+RH +++ R V P AA + G Sbjct: 279 GLPAEAVRHFSKILEARRGVLPHPFAAACLVG 310
>AK106868:Os06g0105300 | Length = 480 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -1 Query: 279 GHLELEDADVLGGLPEQHVDIGVPGVRD 196 GH ELE V GG+ + V +G+ G+ D Sbjct: 340 GHGELEQVGVEGGVVGKGVGVGIAGIHD 367
>AK106661:Os03g0796000 | Length = 322 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/86 (27%), Positives = 32/86 (37%) Frame = -1 Query: 345 AGPRRRRGIPSRAVDGGEPPQGGHLELEDADVLGGLPEQHVDIGVPGVRDYLLELPQPPQ 166 A + + R V GGHLE+ DA + G +Q VD G ++L P Sbjct: 237 ADAAKGEAVDRRRVHDRPRRHGGHLEVRDAPGIDGGDDQLVDAGGGVEVEHLQRQPGRTP 296 Query: 165 HHVLEGPPVHQRCHHPLGLSHREGGL 88 EGP H L GG+ Sbjct: 297 ASRQEGPDGAGHGAHGAALVPPGGGV 322
>Os03g0805800:Os03g0805800 | Length = 778 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Frame = -1 Query: 363 PWALRW---AGPRRRR-GIPSRAVDGGEPPQGGHLELED--ADVLGG 241 PW +W +G RRRR +P+ AV PP E E+ A +GG Sbjct: 33 PWRQQWKHTSGERRRRLSMPASAVAAETPPPHARAEEEEEAAPAVGG 79
>AB040744:Os04g0301500 | Length = 310 Score = 27.7 bits (60), Expect = 7.1 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Frame = +1 Query: 112 AKGVVASLMHRRPFQHMVLRRLRELKKIVPDARDADVDVLLRQTAEYICILEL-KVAALR 288 A G +++ R + + +L L+ +VP+ D +++ EYI L+ + LR Sbjct: 88 AGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLR 147 Query: 289 RLSAIYGA*WDAAPPSRSGP 348 ++A+ A +A P+ + P Sbjct: 148 EVAALESAAAASAAPAAANP 167
>Os12g0572800:Os12g0572800 | Length = 1132 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 8/60 (13%) Frame = -1 Query: 282 GGHLELEDADVLGGLPEQ--------HVDIGVPGVRDYLLELPQPPQHHVLEGPPVHQRC 127 G +E++DA G LP + H VP V +LL+ +H++ + P+ ++C Sbjct: 597 GKRVEVKDAVARGSLPAEIQKIAPFRHHSQEVPKVTHHLLDGELKEEHYIRKRRPLPEKC 656
>Os09g0446100:Os09g0446100 | Length = 175 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 3/28 (10%) Frame = -1 Query: 381 GAQNL*PWALRWAGPR---RRRGIPSRA 307 G + PW LRW G R RR G+ S A Sbjct: 30 GRNQITPWVLRWGGERTGSRRTGLVSSA 57
>Os04g0203500:Os04g0203500 | Length = 707 Score = 27.3 bits (59), Expect = 9.3 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Frame = -1 Query: 177 QPPQHHVLEGPPVHQRCHHPLGLS--HREGGLPSHLSLCISPSLP--PQVAVSLTCAVCG 10 +PP + PP HH L LS G+ ++L + + P P A+ L A C Sbjct: 589 RPPSPRPINPPPCRHYPHHLLSLSPLFPISGVAAYLEAAAAAAEPTRPAAALRLVAAPCS 648 Query: 9 G 7 G Sbjct: 649 G 649
>Os02g0564700:Os02g0564700 | Length = 537 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/45 (28%), Positives = 29/45 (64%), Gaps = 2/45 (4%) Frame = +1 Query: 172 RLRELKKIVPDARDADVDVLLRQTAEYICILEL--KVAALRRLSA 300 R+++L+++VP++ + +L + +Y+ L+L KV ++ RL A Sbjct: 352 RMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVLSMSRLGA 396
>AK121614:Os09g0510000 | Length = 121 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/44 (31%), Positives = 17/44 (38%) Frame = -1 Query: 210 PGVRDYLLELPQPPQHHVLEGPPVHQRCHHPLGLSHREGGLPSH 79 PG + Y E QPP ++ P H HH H G H Sbjct: 45 PGYQGYFSEGQQPPYYYPPPHDPHHHHGHHHHHEDHHHHGHHHH 88
>AK099887:Os01g0316500 | Length = 246 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 2/22 (9%) Frame = -1 Query: 357 ALRWAGP--RRRRGIPSRAVDG 298 + RW GP RRRRG SR+V G Sbjct: 70 SFRWLGPRKRRRRGAGSRSVSG 91
>AK072587:Os05g0164900 | Length = 1049 Score = 27.3 bits (59), Expect = 9.3 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 7/75 (9%) Frame = -1 Query: 249 LGGLPEQH---VDIGVPGVRDYLLELPQPPQHHVLEGPPVHQRCHHPLGLSHREGGL--- 88 L GLP H V PG+ +L H + E Q C P SH +G L Sbjct: 42 LFGLPSVHYSYVRNVKPGLPLFLFNYSDRKLHGIFEAASPGQMCIDPYAWSH-DGSLRTS 100 Query: 87 -PSHLSLCISPSLPP 46 P+ + +C PP Sbjct: 101 FPAQVRICTKTRYPP 115
>AK065622:Os07g0168000 | Length = 902 Score = 27.3 bits (59), Expect = 9.3 Identities = 21/71 (29%), Positives = 29/71 (40%) Frame = -1 Query: 219 IGVPGVRDYLLELPQPPQHHVLEGPPVHQRCHHPLGLSHREGGLPSHLSLCISPSLPPQV 40 + PG +LL LP PP H L H GG+P+ L + P +V Sbjct: 2 LATPGALHHLLLLPPPP--------------HTQLAFHHAVGGVPAAL---LPLPRPRRV 44 Query: 39 AVSLTCAVCGG 7 A S + + GG Sbjct: 45 AASASTSRRGG 55 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,883,498 Number of extensions: 559069 Number of successful extensions: 1837 Number of sequences better than 10.0: 36 Number of HSP's gapped: 1832 Number of HSP's successfully gapped: 36 Length of query: 220 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 123 Effective length of database: 11,515,878 Effective search space: 1416452994 Effective search space used: 1416452994 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
