Clone Name | FLbaf92m09 |
---|---|
Clone Library Name | barley_pub |
>emb|CT835830.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA004N04, full insert sequence Length = 732 Score = 121 bits (61), Expect = 3e-24 Identities = 142/169 (84%) Strand = Plus / Plus Query: 137 tgcacaggaggcccttccagcacatggtgctgaggaggctgagggagctcaagaagatag 196 |||| |||| |||| | ||||||||||||| ||||||||| |||||||| |||||||||| Sbjct: 123 tgcataggaagccccttcagcacatggtgcagaggaggctaagggagctgaagaagatag 182 Query: 197 tcccggacgcccgggacgccgatgtcgacgtgctgctccggcagaccgccgagtacatct 256 | || || |||| || | | | ||||| |||||||||||||| || || |||||||||| Sbjct: 183 taccagatgcccatgaggacaacgtcgatgtgctgctccggcaaacggctgagtacatct 242 Query: 257 gcatcctcgagctcaaggtggccgccctgcggaggctctccgccatcta 305 ||||||| ||||| |||||||||| | |||||| |||| |||| ||||| Sbjct: 243 gcatccttgagctgaaggtggccgtcttgcggaagctcgccgcaatcta 291 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 512 ggagtttgtttggcagcagaagccggccattgttactgacaa 553 |||||||||||||| | ||||||| ||||||||| ||||||| Sbjct: 474 ggagtttgtttggctggagaagccagccattgtttctgacaa 515
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 113 bits (57), Expect = 8e-22 Identities = 141/169 (83%) Strand = Plus / Minus Query: 137 tgcacaggaggcccttccagcacatggtgctgaggaggctgagggagctcaagaagatag 196 |||| |||| |||| | ||||||||||||| ||||||||| |||||||| |||||||||| Sbjct: 15451352 tgcataggaagccccttcagcacatggtgcagaggaggctaagggagctgaagaagatag 15451293 Query: 197 tcccggacgcccgggacgccgatgtcgacgtgctgctccggcagaccgccgagtacatct 256 | || || |||| || | | | ||||| |||||||||||||| || || |||||||||| Sbjct: 15451292 taccagatgcccatgaggacaacgtcgatgtgctgctccggcaaacggctgagtacatct 15451233 Query: 257 gcatcctcgagctcaaggtggccgccctgcggaggctctccgccatcta 305 ||||||| ||||| |||||||||| |||||| |||| |||| ||||| Sbjct: 15451232 gcatccttgagctgaaggtggccgtgttgcggaagctcgccgcaatcta 15451184 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 512 ggagtttgtttggcagcagaagccggccattgttactgacaa 553 |||||||||||||| | ||||||| ||||||||| ||||||| Sbjct: 15451001 ggagtttgtttggctggagaagccagccattgtttctgacaa 15450960
>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1299_A11 Length = 160099 Score = 113 bits (57), Expect = 8e-22 Identities = 141/169 (83%) Strand = Plus / Minus Query: 137 tgcacaggaggcccttccagcacatggtgctgaggaggctgagggagctcaagaagatag 196 |||| |||| |||| | ||||||||||||| ||||||||| |||||||| |||||||||| Sbjct: 100644 tgcataggaagccccttcagcacatggtgcagaggaggctaagggagctgaagaagatag 100585 Query: 197 tcccggacgcccgggacgccgatgtcgacgtgctgctccggcagaccgccgagtacatct 256 | || || |||| || | | | ||||| |||||||||||||| || || |||||||||| Sbjct: 100584 taccagatgcccatgaggacaacgtcgatgtgctgctccggcaaacggctgagtacatct 100525 Query: 257 gcatcctcgagctcaaggtggccgccctgcggaggctctccgccatcta 305 ||||||| ||||| |||||||||| |||||| |||| |||| ||||| Sbjct: 100524 gcatccttgagctgaaggtggccgtgttgcggaagctcgccgcaatcta 100476 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 512 ggagtttgtttggcagcagaagccggccattgttactgacaa 553 |||||||||||||| | ||||||| ||||||||| ||||||| Sbjct: 100293 ggagtttgtttggctggagaagccagccattgtttctgacaa 100252
>emb|CT835928.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA041E14, full insert sequence Length = 738 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 213 cgccgatgtcgacgtgctgctccggcagaccgccgagtacatctgcatcctcgagctcaa 272 |||||| ||||||| |||||||| | ||||||||||||||||| ||| ||| |||| Sbjct: 264 cgccgacgtcgacgcgctgctccaccgcgccgccgagtacatctgcgccctggaggtcaa 323 Query: 273 ggtggccgccctgcggaggctctccgccatctacggcgc 311 ||| |||| ||| || | ||||||||||||||||||||| Sbjct: 324 ggtcgccgtcctccgcaagctctccgccatctacggcgc 362 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 142 aggaggcccttccagcacatggtgctgaggaggctgagggagctcaagaagat 194 |||||||| ||||||| |||||||||||| |||| ||||||| |||||||| Sbjct: 163 aggaggccgttccagctgatggtgctgaggcggctccgggagctgaagaagat 215
>ref|NM_001068458.1| Oryza sativa (japonica cultivar-group) Os08g0444500 (Os08g0444500) mRNA, complete cds Length = 282 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 213 cgccgatgtcgacgtgctgctccggcagaccgccgagtacatctgcatcctcgagctcaa 272 |||||| ||||||| |||||||| | ||||||||||||||||| ||| ||| |||| Sbjct: 180 cgccgacgtcgacgcgctgctccaccgcgccgccgagtacatctgcgccctggaggtcaa 239 Query: 273 ggtggccgccctgcggaggctctccgccatctacggcgc 311 ||| |||| ||| || | ||||||||||||||||||||| Sbjct: 240 ggtcgccgtcctccgcaagctctccgccatctacggcgc 278 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 142 aggaggcccttccagcacatggtgctgaggaggctgagggagctcaagaagat 194 |||||||| ||||||| |||||||||||| |||| ||||||| |||||||| Sbjct: 79 aggaggccgttccagctgatggtgctgaggcggctccgggagctgaagaagat 131
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 213 cgccgatgtcgacgtgctgctccggcagaccgccgagtacatctgcatcctcgagctcaa 272 |||||| ||||||| |||||||| | ||||||||||||||||| ||| ||| |||| Sbjct: 21646676 cgccgacgtcgacgcgctgctccaccgcgccgccgagtacatctgcgccctggaggtcaa 21646617 Query: 273 ggtggccgccctgcggaggctctccgccatctacggcgc 311 ||| |||| ||| || | ||||||||||||||||||||| Sbjct: 21646616 ggtcgccgtcctccgcaagctctccgccatctacggcgc 21646578 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 142 aggaggcccttccagcacatggtgctgaggaggctgagggagctcaagaagat 194 |||||||| ||||||| |||||||||||| |||| ||||||| |||||||| Sbjct: 21646777 aggaggccgttccagctgatggtgctgaggcggctccgggagctgaagaagat 21646725
>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C12 Length = 136799 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 213 cgccgatgtcgacgtgctgctccggcagaccgccgagtacatctgcatcctcgagctcaa 272 |||||| ||||||| |||||||| | ||||||||||||||||| ||| ||| |||| Sbjct: 14246 cgccgacgtcgacgcgctgctccaccgcgccgccgagtacatctgcgccctggaggtcaa 14187 Query: 273 ggtggccgccctgcggaggctctccgccatctacggcgc 311 ||| |||| ||| || | ||||||||||||||||||||| Sbjct: 14186 ggtcgccgtcctccgcaagctctccgccatctacggcgc 14148 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 142 aggaggcccttccagcacatggtgctgaggaggctgagggagctcaagaagat 194 |||||||| ||||||| |||||||||||| |||| ||||||| |||||||| Sbjct: 14347 aggaggccgttccagctgatggtgctgaggcggctccgggagctgaagaagat 14295
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 213 cgccgatgtcgacgtgctgctccggcagaccgccgagtacatctgcatcctcgagctcaa 272 |||||| ||||||| |||||||| | ||||||||||||||||| ||| ||| |||| Sbjct: 106850 cgccgacgtcgacgcgctgctccaccgcgccgccgagtacatctgcgccctggaggtcaa 106791 Query: 273 ggtggccgccctgcggaggctctccgccatctacggcgc 311 ||| |||| ||| || | ||||||||||||||||||||| Sbjct: 106790 ggtcgccgtcctccgcaagctctccgccatctacggcgc 106752 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 142 aggaggcccttccagcacatggtgctgaggaggctgagggagctcaagaagat 194 |||||||| ||||||| |||||||||||| |||| ||||||| |||||||| Sbjct: 106951 aggaggccgttccagctgatggtgctgaggcggctccgggagctgaagaagat 106899
>gb|AY106670.1| Zea mays PCO096646 mRNA sequence Length = 608 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 220 gtcgacgtgctgctccggcagaccgccgagtacatctgcatcctcgagctcaaggtggcc 279 ||||||||| ||||||||| ||||||||||||||||||| || ||||| |||||||| Sbjct: 228 gtcgacgtggtgctccggcggaccgccgagtacatctgcgcgctggagctgaaggtggca 287 Query: 280 gccctgcggaggctctc 296 ||| ||||||||||| Sbjct: 288 ctcctccggaggctctc 304 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 146 ggcccttccagcacatggtgctgaggaggctgagggagctcaagaagat 194 |||| ||||||| ||||||||||||| ||||| ||||||| |||||||| Sbjct: 145 ggccgttccagctcatggtgctgaggcggctgcgggagctgaagaagat 193
>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete sequence Length = 208153 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 cacaagttagtgacacagcaacc 43 ||||||||||||||||||||||| Sbjct: 111308 cacaagttagtgacacagcaacc 111286
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 ctcgagctcaaggtggccgccc 283 |||||||||||||||||||||| Sbjct: 26156 ctcgagctcaaggtggccgccc 26135
>ref|XM_817114.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0092) partial mRNA Length = 2991 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 ctcgagctcaaggtggccgccc 283 |||||||||||||||||||||| Sbjct: 1708 ctcgagctcaaggtggccgccc 1729
>ref|XM_001235332.1| PREDICTED: Gallus gallus hypothetical protein LOC772157 (LOC772157), mRNA Length = 978 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 gtgctgaggaggctgagggag 183 ||||||||||||||||||||| Sbjct: 811 gtgctgaggaggctgagggag 831
>ref|XM_001232181.1| PREDICTED: Gallus gallus similar to glutamate receptor, ionotropic, N-methyl-D-aspartate 3A (LOC769001), mRNA Length = 3542 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 557 aatggctggtgttggctacaagaac 581 |||||||||||||||| |||||||| Sbjct: 3421 aatggctggtgttggccacaagaac 3397
>gb|AC186541.2| Gallus gallus BAC clone CH261-93I3 from chromosome z, complete sequence Length = 171062 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 557 aatggctggtgttggctacaagaac 581 |||||||||||||||| |||||||| Sbjct: 47716 aatggctggtgttggccacaagaac 47692
>gb|DQ144444.1| Ascocalyx abietina clone pCT850-AU58-b microsatellite sequence Length = 837 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 558 atggctggtgttggctacaag 578 ||||||||||||||||||||| Sbjct: 336 atggctggtgttggctacaag 316
>emb|AL845484.9| Mouse DNA sequence from clone RP23-336L14 on chromosome 11 Contains the 3' end of the Sez6 gene for seizure related gene 6, complete sequence Length = 47702 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 606 cttatggaatatatagttgtt 626 ||||||||||||||||||||| Sbjct: 29729 cttatggaatatatagttgtt 29749
>emb|AL669915.8| Mouse DNA sequence from clone RP23-13B21 on chromosome 11 no genes, complete sequence Length = 193440 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 gaatatatagttgtttctatt 632 ||||||||||||||||||||| Sbjct: 145368 gaatatatagttgtttctatt 145388
>ref|XM_001235605.1| PREDICTED: Gallus gallus hypothetical protein LOC772473 (LOC776041), mRNA Length = 423 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 tgccgcgcctccgtctcggt 340 |||||||||||||||||||| Sbjct: 207 tgccgcgcctccgtctcggt 226
>gb|DQ926670.1| Uncultured bacterium clone N4 16S ribosomal RNA gene, partial sequence Length = 893 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 gtcacacatgggagtttgtt 521 |||||||||||||||||||| Sbjct: 812 gtcacacatgggagtttgtt 831
>ref|XM_001225790.1| Chaetomium globosum CBS 148.51 predicted protein (CHGG_08135) mRNA, complete cds Length = 1602 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggtgctgaggaggctgaggg 181 |||||||||||||||||||| Sbjct: 775 ggtgctgaggaggctgaggg 794
>ref|XM_001112906.1| PREDICTED: Macaca mulatta hypothetical protein LOC719156 (LOC719156), mRNA Length = 435 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 accccccacaccccctccag 464 |||||||||||||||||||| Sbjct: 99 accccccacaccccctccag 118
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 cgacgtgctgctccggcaga 241 |||||||||||||||||||| Sbjct: 833790 cgacgtgctgctccggcaga 833809
>gb|AC163015.4| Mus musculus chromosome 3, clone RP23-149I5, complete sequence Length = 200423 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 acacacagcacaagttagtg 32 |||||||||||||||||||| Sbjct: 111450 acacacagcacaagttagtg 111469
>gb|AC137981.2| Mus musculus BAC clone RP24-156N24 from chromosome 10, complete sequence Length = 151463 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 gaacaattatctaagcccct 597 |||||||||||||||||||| Sbjct: 609 gaacaattatctaagcccct 628
>gb|AC146220.3| Pan troglodytes BAC clone RP43-27B14 from 7, complete sequence Length = 200195 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 tgcacaggaggcccttccag 156 |||||||||||||||||||| Sbjct: 182650 tgcacaggaggcccttccag 182631
>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence Length = 245623 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 gaacaattatctaagcccct 597 |||||||||||||||||||| Sbjct: 62507 gaacaattatctaagcccct 62488
>gb|AC136729.7| Mus musculus chromosome 3, clone RP23-175I24, complete sequence Length = 216602 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ctgaggaggctgagggagct 185 |||||||||||||||||||| Sbjct: 100488 ctgaggaggctgagggagct 100469
>gb|AC142318.1| Pan troglodytes BAC clone RP43-55D2 from 7, complete sequence Length = 166749 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 tgcacaggaggcccttccag 156 |||||||||||||||||||| Sbjct: 53310 tgcacaggaggcccttccag 53291
>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome Length = 1315030 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 aatatatagttgtttctatt 632 |||||||||||||||||||| Sbjct: 1291913 aatatatagttgtttctatt 1291894
>gb|AC092899.6| Homo sapiens 3 BAC RP11-329N5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 42216 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 622 ttgtttctattcagctttcc 641 |||||||||||||||||||| Sbjct: 7139 ttgtttctattcagctttcc 7158
>emb|AL139010.29| Human DNA sequence from clone RP11-444M10 on chromosome 1 Contains the 3' end of a novel gene, a novel gene and the KIRREL gene for kin of IRRE like (Drosophila), complete sequence Length = 189477 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 ttatctaagcccctccctgc 603 |||||||||||||||||||| Sbjct: 71423 ttatctaagcccctccctgc 71442
>emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome; segment 2/7 Length = 349323 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 181 gagctcaagaagatagtcccggacgccc 208 |||||||||||||||||| ||| ||||| Sbjct: 2343 gagctcaagaagatagtcgcggccgccc 2316
>gb|AC012325.9| Homo sapiens chromosome 16 clone RP11-93H5, complete sequence Length = 204524 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 tgggaaaggccaagggggtggtgg 127 ||||||||||||||| |||||||| Sbjct: 142993 tgggaaaggccaaggtggtggtgg 143016
>gb|AC007249.5| Homo sapiens BAC clone RP11-320M2 from 2, complete sequence Length = 200491 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 ggtgctgaggaggctgagggagct 185 |||||||||||||||| ||||||| Sbjct: 187175 ggtgctgaggaggctgtgggagct 187152
>gb|AC132186.3| Homo sapiens chromosome 16 clone CTD-2258A20, complete sequence Length = 157833 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 tgggaaaggccaagggggtggtgg 127 ||||||||||||||| |||||||| Sbjct: 52155 tgggaaaggccaaggtggtggtgg 52178
>emb|AL732501.8| Mouse DNA sequence from clone RP23-325I22 on chromosome X, complete sequence Length = 206856 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 gaatatatagttgtttctat 631 |||||||||||||||||||| Sbjct: 111098 gaatatatagttgtttctat 111079
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cccggacgcccgggacgccg 217 |||||||||||||||||||| Sbjct: 169424 cccggacgcccgggacgccg 169443
>ref|NM_013058.2| Rattus norvegicus inhibitor of DNA binding 3 (Id3), mRNA gb|BC064658.1| Rattus norvegicus inhibitor of DNA binding 3, mRNA (cDNA clone MGC:72531 IMAGE:5623701), complete cds Length = 983 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ctcgtgtaccccccacaccc 457 |||||||||||||||||||| Sbjct: 731 ctcgtgtaccccccacaccc 712
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccgtctcggtccggcccacc 350 |||||||||||||||||||| Sbjct: 2157991 ccgtctcggtccggcccacc 2157972
>emb|AL390778.31| Human DNA sequence from clone RP11-399H11 on chromosome 9 Contains the 3' end of the OLFM1 gene for olfactomedin 1, two putative novel transcripts and two CpG islands, complete sequence Length = 221372 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 tggtgctgaggaggctgagg 180 |||||||||||||||||||| Sbjct: 149964 tggtgctgaggaggctgagg 149983
>emb|AJ812656.1| Acinetobacter sp. 93A2 partial 16S rRNA gene, strain 93A2 Length = 1433 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 gtcacacatgggagtttgtt 521 |||||||||||||||||||| Sbjct: 1355 gtcacacatgggagtttgtt 1374
>emb|AL627342.15| Mouse DNA sequence from clone RP23-281G20 on chromosome 4, complete sequence Length = 84122 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 cagcacatggtgctgaggaggctg 177 |||||||||||||||||| ||||| Sbjct: 70105 cagcacatggtgctgaggtggctg 70128 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 103,179,664 Number of extensions: 6333769 Number of successful extensions: 123131 Number of sequences better than 10.0: 43 Number of HSP's gapped: 123128 Number of HSP's successfully gapped: 52 Length of query: 660 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 638 Effective length of database: 18,508,616,841 Effective search space: 11808497544558 Effective search space used: 11808497544558 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)