ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf89k16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066274:Os01g0249300 | 195 | 3e-50 | 2 | AK061748:Os01g0249300 | 195 | 3e-50 | 3 | AK069846:Os01g0664500 | 112 | 3e-25 | 4 | AK059427:Os01g0664500 | 112 | 3e-25 | 5 | AK058475:Os05g0566600 | 110 | 1e-24 | 6 | AK062385:Os01g0305200 | 78 | 8e-15 | 7 | AK062656:Os03g0304800 | 72 | 3e-13 | 8 | AK060345: | 31 | 1.1 | 9 | Os03g0837700:Os03g0837700 | 29 | 4.3 | 10 | AK106374:Os02g0141400 | 28 | 5.7 | 11 | Os05g0390600:Os05g0390600 | 28 | 7.4 | 12 | AK069301:Os07g0555200 | 28 | 9.7 | 13 | AK068744:Os07g0555200 | 28 | 9.7 |
|---|
>AK066274:Os01g0249300 | Length = 126 Score = 195 bits (495), Expect = 3e-50 Identities = 95/126 (75%), Positives = 102/126 (80%) Frame = +1 Query: 154 MSGMKDANAAGHDNVGNSEPMDQSGDNAMPSAQQQEQVIKKKFGGLIPKKPPLISKDHER 333 MS MKD NAAG + VGN +PMDQ+ DN+MPSAQ+QE IKKKFGGL+PKKPPLISKDHER Sbjct: 1 MSDMKDTNAAGPETVGNPDPMDQTEDNSMPSAQEQELAIKKKFGGLMPKKPPLISKDHER 60 Query: 334 AYFDSADWALGKSGQQGVAKPKGPLEALRPKLQPTXXXXXXXXXXXXXXXENEDGDGAGS 513 AYFDSADWALGKSGQQG AKPKGPLEALRPKLQPT ENEDGDGAG+ Sbjct: 61 AYFDSADWALGKSGQQGAAKPKGPLEALRPKLQPTRQQQQRSRRLINTSSENEDGDGAGA 120 Query: 514 EDMNIN 531 EDMNIN Sbjct: 121 EDMNIN 126
>AK061748:Os01g0249300 | Length = 126 Score = 195 bits (495), Expect = 3e-50 Identities = 95/126 (75%), Positives = 102/126 (80%) Frame = +1 Query: 154 MSGMKDANAAGHDNVGNSEPMDQSGDNAMPSAQQQEQVIKKKFGGLIPKKPPLISKDHER 333 MS MKD NAAG + VGN +PMDQ+ DN+MPSAQ+QE IKKKFGGL+PKKPPLISKDHER Sbjct: 1 MSDMKDTNAAGPETVGNPDPMDQTEDNSMPSAQEQELAIKKKFGGLMPKKPPLISKDHER 60 Query: 334 AYFDSADWALGKSGQQGVAKPKGPLEALRPKLQPTXXXXXXXXXXXXXXXENEDGDGAGS 513 AYFDSADWALGKSGQQG AKPKGPLEALRPKLQPT ENEDGDGAG+ Sbjct: 61 AYFDSADWALGKSGQQGAAKPKGPLEALRPKLQPTRQQQQRSRRLINTSSENEDGDGAGA 120 Query: 514 EDMNIN 531 EDMNIN Sbjct: 121 EDMNIN 126
>AK069846:Os01g0664500 | Length = 171 Score = 112 bits (280), Expect = 3e-25 Identities = 58/103 (56%), Positives = 70/103 (67%), Gaps = 7/103 (6%) Frame = +1 Query: 151 TMSGMKDANAAGH-------DNVGNSEPMDQSGDNAMPSAQQQEQVIKKKFGGLIPKKPP 309 TMSGM A G + + +QS + MPS Q++E IKKK+GG++PK+ P Sbjct: 29 TMSGMPSDEATGQVRLEGDVSDKKEEKTQEQSEASGMPSPQEEEAAIKKKYGGILPKRTP 88 Query: 310 LISKDHERAYFDSADWALGKSGQQGVAKPKGPLEALRPKLQPT 438 I+KDH+RAYFDSADWALGK G G KPKGPLEALRPKLQPT Sbjct: 89 HITKDHDRAYFDSADWALGKQG--GSHKPKGPLEALRPKLQPT 129
>AK059427:Os01g0664500 | Length = 150 Score = 112 bits (280), Expect = 3e-25 Identities = 58/103 (56%), Positives = 70/103 (67%), Gaps = 7/103 (6%) Frame = +1 Query: 151 TMSGMKDANAAGH-------DNVGNSEPMDQSGDNAMPSAQQQEQVIKKKFGGLIPKKPP 309 TMSGM A G + + +QS + MPS Q++E IKKK+GG++PK+ P Sbjct: 8 TMSGMPSDEATGQVRLEGDVSDKKEEKTQEQSEASGMPSPQEEEAAIKKKYGGILPKRTP 67 Query: 310 LISKDHERAYFDSADWALGKSGQQGVAKPKGPLEALRPKLQPT 438 I+KDH+RAYFDSADWALGK G G KPKGPLEALRPKLQPT Sbjct: 68 HITKDHDRAYFDSADWALGKQG--GSHKPKGPLEALRPKLQPT 108
>AK058475:Os05g0566600 | Length = 114 Score = 110 bits (275), Expect = 1e-24 Identities = 57/105 (54%), Positives = 71/105 (67%) Frame = +1 Query: 217 DQSGDNAMPSAQQQEQVIKKKFGGLIPKKPPLISKDHERAYFDSADWALGKSGQQGVAKP 396 +Q+ MPS Q++E IKKK+GG++P+KP LI+KDHERAYFDSADWALGK G KP Sbjct: 2 NQNEKEVMPSPQEEEAAIKKKYGGIVPRKPALIAKDHERAYFDSADWALGKQGGH-PQKP 60 Query: 397 KGPLEALRPKLQPTXXXXXXXXXXXXXXXENEDGDGAGSEDMNIN 531 KGPLEALRPKLQPT +NE+G + +ED + N Sbjct: 61 KGPLEALRPKLQPT-QQQARSRRFLHASVDNEEGLNSPTEDASQN 104
>AK062385:Os01g0305200 | Length = 123 Score = 77.8 bits (190), Expect = 8e-15 Identities = 44/88 (50%), Positives = 55/88 (62%) Frame = +1 Query: 175 NAAGHDNVGNSEPMDQSGDNAMPSAQQQEQVIKKKFGGLIPKKPPLISKDHERAYFDSAD 354 NA G + E M G++ + Q++E + K+GG+ PKKP LI+KDHERAYFDSAD Sbjct: 22 NAGGWTTLALGE-MASFGEDNRAATQREEGSSQNKYGGISPKKP-LINKDHERAYFDSAD 79 Query: 355 WALGKSGQQGVAKPKGPLEALRPKLQPT 438 WALGK G KG E L+PKLQ T Sbjct: 80 WALGKQGASN--STKGTTEPLKPKLQRT 105
>AK062656:Os03g0304800 | Length = 88 Score = 72.4 bits (176), Expect = 3e-13 Identities = 36/65 (55%), Positives = 46/65 (70%) Frame = +1 Query: 244 SAQQQEQVIKKKFGGLIPKKPPLISKDHERAYFDSADWALGKSGQQGVAKPKGPLEALRP 423 ++ ++E I+KK+GG+ PKKP LISKDHERAYFDSADW LGK K +E L+P Sbjct: 11 ASMEEEACIEKKYGGIAPKKP-LISKDHERAYFDSADWVLGKQAANSNGS-KAAVETLKP 68 Query: 424 KLQPT 438 KL+ T Sbjct: 69 KLKRT 73
>AK060345: | Length = 246 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -3 Query: 782 NWTMVQSIVLVTFGHIARWLFDELQTRSPLKLQRLFSSYLW 660 NW + +L+ FG +A F + R+ L + LF +++W Sbjct: 9 NWPLFFGCILIAFGPLATLFFLVVSKRAQLLIISLFGAFIW 49
>Os03g0837700:Os03g0837700 | Length = 262 Score = 28.9 bits (63), Expect = 4.3 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = -1 Query: 634 HPFPAVHRQRKQAASSDDEAPSFATRTGGSTLLIS*YSCPPTQRHLHPRFLMSCRW 467 HP A R++ A++D+E P A R G + ++I C F ++CRW Sbjct: 158 HPEMAAAASRRRGAAADEEGP--ARRQGEAPMVIYCKRCDREFVREPDEFGVTCRW 211
>AK106374:Os02g0141400 | Length = 426 Score = 28.5 bits (62), Expect = 5.7 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Frame = -1 Query: 148 VTVTETPAAREASARR-WRNGEPRDDERQRL 59 V TET REA R WR G PR D+ + L Sbjct: 392 VLSTETVVTREARRRSSWRRGRPRKDDDETL 422
>Os05g0390600:Os05g0390600 | Length = 385 Score = 28.1 bits (61), Expect = 7.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 211 PMDQSGDNAMPSAQQQEQVIKKKFGGLIPKK 303 P +QS + P QQQ+Q +KK F + KK Sbjct: 215 PKNQSNSSGQPLQQQQQQGLKKPFSFSMRKK 245
>AK069301:Os07g0555200 | Length = 1296 Score = 27.7 bits (60), Expect = 9.7 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +1 Query: 187 HDNVGNSEPMDQSGDNAMPSAQQQEQVI 270 H+ + + MD SG +PS QQQ Q + Sbjct: 414 HEELKLDKRMDSSGQRGLPSVQQQSQPV 441
>AK068744:Os07g0555200 | Length = 918 Score = 27.7 bits (60), Expect = 9.7 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +1 Query: 187 HDNVGNSEPMDQSGDNAMPSAQQQEQVI 270 H+ + + MD SG +PS QQQ Q + Sbjct: 414 HEELKLDKRMDSSGQRGLPSVQQQSQPV 441 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 22,059,552 Number of extensions: 484907 Number of successful extensions: 1492 Number of sequences better than 10.0: 13 Number of HSP's gapped: 1486 Number of HSP's successfully gapped: 13 Length of query: 267 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 168 Effective length of database: 11,435,796 Effective search space: 1921213728 Effective search space used: 1921213728 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
